HHsearch alignment for GI: 254780842 and conserved domain: PRK13339
>PRK13339 malate:quinone oxidoreductase; Reviewed.
Probab=98.25 E-value=8.6e-06 Score=61.40 Aligned_cols=171 Identities=11% Similarity=0.183 Sum_probs=89.8
Q ss_pred CEEEEEEECCCHHHHHHHHHHHHC--CCEEEEEECCCCCC--------CCCEEE-------ECH----------HHHHH-
Q ss_conf 700299997908999999999978--98599982885555--------783688-------878----------89999-
Q gi|254780842|r 2 NHFDVIIIGSGLAGSVAAIGAAKK--GFLTALVSPRSFLQ--------DLRTTM-------LMG----------EGIDF- 53 (384)
Q Consensus 2 ~~~DV~IvGaG~aGl~lA~~L~~~--g~~v~iiE~~~~~~--------~~r~~~-------l~~----------~s~~~- 53 (384)
T Consensus 5 ~~~DVvLIGaGIMsaTL~~lL~el~P~~~I~l~Erl~~~A~ESS~~wNNAGTGHaa~CElNYTp~~~dg~i~i~KA~~In 84 (497)
T PRK13339 5 ESKDVVLVGAGILSTTFGVLLKELDPDWNIEVVERLDSPAIESSNERNNAGTGHAALCELNYTVQQADGSIDIKKAKEIN 84 (497)
T ss_pred CCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEHHHHHHHH
T ss_conf 77788998952889999999997699874899981475454407886655221001022048876569824179999999
Q ss_pred ------------HHHCCCHHHHHHCCCCCCCEEEEECCCCCC--------CCCCCCCCCHHC------------------
Q ss_conf ------------998899478886047123418994257655--------454443450222------------------
Q gi|254780842|r 54 ------------LKEINVWDFLQDIAEPVSSFRLVDITDRLI--------TAPDAIFHSSEI------------------ 95 (384)
Q Consensus 54 ------------L~~lGl~~~l~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~------------------ 95 (384)
T Consensus 85 eqFe~S~QfWs~lv~~g~l~~p~~FI~~~PHmSfV~Ge~nv~fLrkRyeal~~~~lF~~MefseD~~~i~~w~PLvm~gR 164 (497)
T PRK13339 85 EQFEISKQFWGHLVKKGTIGNPREFINPLPHISFVRGKNNVKFLKKRFEALKQHPMFDNIEYTEDIEVMAKWMPLMMPGR 164 (497)
T ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHCCEEECCC
T ss_conf 99999999999998657879857873779824675675888999999998734878777686059899975377522698
Q ss_pred -CCCC-------CCCHHHHCCHHHHHHHHHHHCCCC-CCCCEEEEEECCCCE-EEEEECCC---C--CEEEEEEEEEECC
Q ss_conf -8753-------120111000000001236647983-234205653026871-78983023---2--0121112353037
Q gi|254780842|r 96 -GLDA-------FGYNIPNHVLMESFAEKISQDPLI-HCFDALANEIQIGEE-EVTILLST---G--QQIVGQFLIGSDG 160 (384)
Q Consensus 96 -~~~~-------~g~~i~r~~L~~~L~~~~~~~~~~-~~~~~~v~~i~~~~~-~v~v~~~d---g--~~i~adlvVgADG 160 (384)
T Consensus 165 ~~~e~vAAtr~~~GTDVdFGaLTr~l~~~l~~~~~~~v~~~~eV~~i~r~~dg~w~v~v~~~~~~~~~~~~A~fVFvGAG 244 (497)
T PRK13339 165 EADEIMAASKIDEGTDVNFGALTRKMAKSLEAHPNAQVQYNHEVVDLERLSDGGWEVTVKDRNTGGKREQVADYVFIGAG 244 (497)
T ss_pred CCCCCEEEEECCCCEEECHHHHHHHHHHHHHHCCCEEEEECCEEEEEEECCCCCEEEEEEECCCCCEEEEEECEEEECCC
T ss_conf 97885558825785340189999999999974898399947886321778999889999965789759999367998887
Q ss_pred CCC-CCCCCCCCC
Q ss_conf 543-200037873
Q gi|254780842|r 161 RNS-SVRRQMGYG 172 (384)
Q Consensus 161 ~~S-~vR~~l~~~ 172 (384)
T Consensus 245 G~sL~LLQksgi~ 257 (497)
T PRK13339 245 GGAIPLLQKSGIP 257 (497)
T ss_pred HHHHHHHHHCCCC
T ss_conf 3778999984996