HHsearch alignment for GI: 254780842 and conserved domain: TIGR01317

>TIGR01317 GOGAT_sm_gam glutamate synthases, NADH/NADPH, small subunit; InterPro: IPR006005 One pathway for the assimilation of ammonia and glutamate biosynthesis involves glutamate synthase (1.4.1.13 from EC) which transfers the amide group of glutamine to 2-oxoglutarate to yield two molecules of glutamate. 2 L-glutamate + NADP^+ = L-glutamine + 2-oxoglutarate + NADPH + H^+. This describes a family in several archaeal and deeply branched bacterial lineages of a homotetrameric form of the NADPH-dependent or NADH-dependent glutamate synthase (1.4.1.13 from EC and 1.4.1.14 from EC respectively) small subunit. There is no corresponding large subunit. ; GO: 0016639 oxidoreductase activity acting on the CH-NH2 group of donors NAD or NADP as acceptor, 0006537 glutamate biosynthetic process.
Probab=98.48  E-value=1.6e-07  Score=74.09  Aligned_cols=33  Identities=27%  Similarity=0.354  Sum_probs=31.4

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             299997908999999999978985999828855
Q gi|254780842|r    5 DVIIIGSGLAGSVAAIGAAKKGFLTALVSPRSF   37 (384)
Q Consensus         5 DV~IvGaG~aGl~lA~~L~~~g~~v~iiE~~~~   37 (384)
T Consensus       153 kVAVVGSGPAGLAaA~qLnrAGH~VTVfER~DR  185 (517)
T TIGR01317       153 KVAVVGSGPAGLAAADQLNRAGHTVTVFEREDR  185 (517)
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf             689975675799999998535883899743678