HHsearch alignment for GI: 254780842 and conserved domain: TIGR01320

>TIGR01320 mal_quin_oxido malate:quinone-oxidoreductase; InterPro: IPR006231 The membrane-associated enzyme, malate:quinone-oxidoreductase, is an alternative to the better-known NAD-dependent malate dehydrogenase as part of the TCA cycle. The reduction of a quinone rather than NAD+ makes the reaction essentially irreversible in the direction of malate oxidation to oxaloacetate. Both forms of malate dehydrogenase are active in E. coli; disruption of this form causes less phenotypic change. In some bacteria, this form is the only or the more important malate dehydrogenase . ; GO: 0008924 malate dehydrogenase (acceptor) activity, 0006099 tricarboxylic acid cycle.
Probab=97.55  E-value=0.00044  Score=48.84  Aligned_cols=313  Identities=15%  Similarity=0.208  Sum_probs=154.8

Q ss_pred             EEEEEECCCHHHHHHHHHHHHC--CCEEEEEECCCCC--------CCCCEEE-------ECH----HHHHHHHHCCC---
Q ss_conf             0299997908999999999978--9859998288555--------5783688-------878----89999998899---
Q gi|254780842|r    4 FDVIIIGSGLAGSVAAIGAAKK--GFLTALVSPRSFL--------QDLRTTM-------LMG----EGIDFLKEINV---   59 (384)
Q Consensus         4 ~DV~IvGaG~aGl~lA~~L~~~--g~~v~iiE~~~~~--------~~~r~~~-------l~~----~s~~~L~~lGl---   59 (384)
T Consensus         1 ~DvvLvGAGIMSATLGvLLk~LeP~w~~~l~Erld~~A~ESS~pWNNAGTGHSALCELNYtP~~~dG~idi~kAv~ine~   80 (487)
T TIGR01320         1 TDVVLVGAGIMSATLGVLLKELEPSWEITLIERLDAVALESSNPWNNAGTGHSALCELNYTPEVADGSIDIAKAVGINEQ   80 (487)
T ss_pred             CCEEEECCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCC
T ss_conf             96788656166899999997309995389998607745466766001120136876422478876782653556220114


Q ss_pred             -------H---------HHHHHCCCCCCCEEEEECCCCCCC--------CCCCCCCCHHCCC------------------
Q ss_conf             -------4---------788860471234189942576554--------5444345022287------------------
Q gi|254780842|r   60 -------W---------DFLQDIAEPVSSFRLVDITDRLIT--------APDAIFHSSEIGL------------------   97 (384)
Q Consensus        60 -------~---------~~l~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~------------------   97 (384)
T Consensus        81 F~VsrQFWa~lv~~G~L~dp~~FiNpVPH~Sfv~G~~~v~YLk~Ry~AL~~~~lF~~m~y~~d~~~~a~~lPLM~~gR~~  160 (487)
T TIGR01320        81 FQVSRQFWAHLVEEGVLEDPKSFINPVPHVSFVRGSDGVAYLKKRYEALKKHPLFEGMEYSEDKATFAEWLPLMAKGRDF  160 (487)
T ss_pred             CEECHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHHCCCCCCCCCC
T ss_conf             11318889899836724685402278885202657066799999999861784313750005868998742545687688


Q ss_pred             -CC--CCCH-----HHHCCHHHHHHHHHHHC-CCCCCCCEEEEEECCC-CEEEEEECCC----C--CEEEEEE-EEEECC
Q ss_conf             -53--1201-----11000000001236647-9832342056530268-7178983023----2--0121112-353037
Q gi|254780842|r   98 -DA--FGYN-----IPNHVLMESFAEKISQD-PLIHCFDALANEIQIG-EEEVTILLST----G--QQIVGQF-LIGSDG  160 (384)
Q Consensus        98 -~~--~g~~-----i~r~~L~~~L~~~~~~~-~~~~~~~~~v~~i~~~-~~~v~v~~~d----g--~~i~adl-vVgADG  160 (384)
T Consensus       161 ~~pvA~~~~~~GTDvdFGalt~Ql~~~~~~~PG~~~~yg~~V~~l~r~sD~~W~vt~~d~r~PG~~~~l~a~FvFlGAGG  240 (487)
T TIGR01320       161 SEPVAANWVAEGTDVDFGALTKQLLKYLEQEPGTKIRYGHEVKDLKRESDGAWVVTVKDTRTPGGKRTLKARFVFLGAGG  240 (487)
T ss_pred             CCHHHHHHHCCCCEECHHHHHHHHHHHHHCCCCCEEECCCCEEHHHHCCCCCCEEEECCCCCCCCCEEEEEEEEEEECCC
T ss_conf             63433212047840027789999999970289816763850001101058853788412208887626766778971574


Q ss_pred             CCCCCCCCCCCCCCCCCC-----CEEEEEEE--------------------ECCCCCCCEEEE----------------E
Q ss_conf             543200037873322224-----30478764--------------------114788611788----------------7
Q gi|254780842|r  161 RNSSVRRQMGYGENKWSY-----PQKALVLN--------------------FQHSMPHNGRCV----------------E  199 (384)
Q Consensus       161 ~~S~vR~~l~~~~~~~~y-----~~~~l~~~--------------------~~~~~~~~~~a~----------------~  199 (384)
T Consensus       241 ~AL~lLq~SGIpe-vKGFaGFPvSG~fLR~~Npe~~~qH~AKVYG~A~vGAPPmSvpHLDtR~v~Gk~~LlFGPYAGf~~  319 (487)
T TIGR01320       241 GALPLLQKSGIPE-VKGFAGFPVSGLFLRCSNPELVEQHRAKVYGQASVGAPPMSVPHLDTRVVDGKKSLLFGPYAGFSP  319 (487)
T ss_pred             CHHHHHHHCCCCC-CCCCCCCCCCCEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
T ss_conf             1688988667987-665336575550001788799985056215778876488875400010255711210157788883


Q ss_pred             ECCCCCCCCCCCC---CCCCEEEE---E---EECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC---CCCEEEEEECCCC
Q ss_conf             2278754210001---23201126---7---507567324553223467887763067546762---1110223202233
Q gi|254780842|r  200 FHKSLGTITQIPL---RENFSSLV---W---IMESQEADFYYKLPVNEIARRLEQYLYPVIGKI---EVVTDVQIFQLSG  267 (384)
Q Consensus       200 ~f~~~G~~a~lP~---~~~~~~iv---w---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~pl~~  267 (384)
T Consensus       320 kFLk~Gs~~DLP~SirpDNl~s~L~va~~~~~Lt~YLi~~l~-~~~~~R~~ALrey~PeA~~~DWel~vAGQR----VQv  394 (487)
T TIGR01320       320 KFLKHGSLLDLPLSIRPDNLLSMLGVALAEMDLTKYLIGELR-KSKEERLEALREYYPEARDEDWELIVAGQR----VQV  394 (487)
T ss_pred             CHHCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHCCCCCCCCCCEEEECCEE----EEE
T ss_conf             120176312065432676512378887752047888998760-693578999974064677988358753616----788


Q ss_pred             CCCHHHHHC-----CCCEECCCCCCCCCHHH--HHHHHHHH-HHHHHHHHHHCCCCC--CHHHHH
Q ss_conf             430456537-----94210110011384456--53211212-389999998525799--079999
Q gi|254780842|r  268 MISHCFGKK-----RVVLVGEAAHALPPICG--QGLNLSMR-DVIILLNLFQSEHMS--FRAIGN  322 (384)
Q Consensus       268 ~~~~~~~~~-----rv~liGDAAH~~~P~~G--qG~n~ai~-Da~~L~~~l~~~~~~--~~~~l~  322 (384)
T Consensus       395 Ik~d~~~~~G~L~FGT~~v~~~dGsiAaLLGASPGAS~Avs~Ml~ll~~CF~~r~~sPeW~~~LK  459 (487)
T TIGR01320       395 IKKDSEKGFGVLEFGTELVADADGSIAALLGASPGASTAVSIMLELLERCFPERARSPEWEDKLK  459 (487)
T ss_pred             EECCCCCCCCCCCCHHEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf             74177888830120011130567327887367984234589999999750546687876456420