HHsearch alignment for GI: 254780842 and conserved domain: TIGR01320
>TIGR01320 mal_quin_oxido malate:quinone-oxidoreductase; InterPro: IPR006231 The membrane-associated enzyme, malate:quinone-oxidoreductase, is an alternative to the better-known NAD-dependent malate dehydrogenase as part of the TCA cycle. The reduction of a quinone rather than NAD+ makes the reaction essentially irreversible in the direction of malate oxidation to oxaloacetate. Both forms of malate dehydrogenase are active in E. coli; disruption of this form causes less phenotypic change. In some bacteria, this form is the only or the more important malate dehydrogenase . ; GO: 0008924 malate dehydrogenase (acceptor) activity, 0006099 tricarboxylic acid cycle.
Probab=97.55 E-value=0.00044 Score=48.84 Aligned_cols=313 Identities=15% Similarity=0.208 Sum_probs=154.8
Q ss_pred EEEEEECCCHHHHHHHHHHHHC--CCEEEEEECCCCC--------CCCCEEE-------ECH----HHHHHHHHCCC---
Q ss_conf 0299997908999999999978--9859998288555--------5783688-------878----89999998899---
Q gi|254780842|r 4 FDVIIIGSGLAGSVAAIGAAKK--GFLTALVSPRSFL--------QDLRTTM-------LMG----EGIDFLKEINV--- 59 (384)
Q Consensus 4 ~DV~IvGaG~aGl~lA~~L~~~--g~~v~iiE~~~~~--------~~~r~~~-------l~~----~s~~~L~~lGl--- 59 (384)
T Consensus 1 ~DvvLvGAGIMSATLGvLLk~LeP~w~~~l~Erld~~A~ESS~pWNNAGTGHSALCELNYtP~~~dG~idi~kAv~ine~ 80 (487)
T TIGR01320 1 TDVVLVGAGIMSATLGVLLKELEPSWEITLIERLDAVALESSNPWNNAGTGHSALCELNYTPEVADGSIDIAKAVGINEQ 80 (487)
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCC
T ss_conf 96788656166899999997309995389998607745466766001120136876422478876782653556220114
Q ss_pred -------H---------HHHHHCCCCCCCEEEEECCCCCCC--------CCCCCCCCHHCCC------------------
Q ss_conf -------4---------788860471234189942576554--------5444345022287------------------
Q gi|254780842|r 60 -------W---------DFLQDIAEPVSSFRLVDITDRLIT--------APDAIFHSSEIGL------------------ 97 (384)
Q Consensus 60 -------~---------~~l~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~------------------ 97 (384)
T Consensus 81 F~VsrQFWa~lv~~G~L~dp~~FiNpVPH~Sfv~G~~~v~YLk~Ry~AL~~~~lF~~m~y~~d~~~~a~~lPLM~~gR~~ 160 (487)
T TIGR01320 81 FQVSRQFWAHLVEEGVLEDPKSFINPVPHVSFVRGSDGVAYLKKRYEALKKHPLFEGMEYSEDKATFAEWLPLMAKGRDF 160 (487)
T ss_pred CEECHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHHCCCCCCCCCC
T ss_conf 11318889899836724685402278885202657066799999999861784313750005868998742545687688
Q ss_pred -CC--CCCH-----HHHCCHHHHHHHHHHHC-CCCCCCCEEEEEECCC-CEEEEEECCC----C--CEEEEEE-EEEECC
Q ss_conf -53--1201-----11000000001236647-9832342056530268-7178983023----2--0121112-353037
Q gi|254780842|r 98 -DA--FGYN-----IPNHVLMESFAEKISQD-PLIHCFDALANEIQIG-EEEVTILLST----G--QQIVGQF-LIGSDG 160 (384)
Q Consensus 98 -~~--~g~~-----i~r~~L~~~L~~~~~~~-~~~~~~~~~v~~i~~~-~~~v~v~~~d----g--~~i~adl-vVgADG 160 (384)
T Consensus 161 ~~pvA~~~~~~GTDvdFGalt~Ql~~~~~~~PG~~~~yg~~V~~l~r~sD~~W~vt~~d~r~PG~~~~l~a~FvFlGAGG 240 (487)
T TIGR01320 161 SEPVAANWVAEGTDVDFGALTKQLLKYLEQEPGTKIRYGHEVKDLKRESDGAWVVTVKDTRTPGGKRTLKARFVFLGAGG 240 (487)
T ss_pred CCHHHHHHHCCCCEECHHHHHHHHHHHHHCCCCCEEECCCCEEHHHHCCCCCCEEEECCCCCCCCCEEEEEEEEEEECCC
T ss_conf 63433212047840027789999999970289816763850001101058853788412208887626766778971574
Q ss_pred CCCCCCCCCCCCCCCCCC-----CEEEEEEE--------------------ECCCCCCCEEEE----------------E
Q ss_conf 543200037873322224-----30478764--------------------114788611788----------------7
Q gi|254780842|r 161 RNSSVRRQMGYGENKWSY-----PQKALVLN--------------------FQHSMPHNGRCV----------------E 199 (384)
Q Consensus 161 ~~S~vR~~l~~~~~~~~y-----~~~~l~~~--------------------~~~~~~~~~~a~----------------~ 199 (384)
T Consensus 241 ~AL~lLq~SGIpe-vKGFaGFPvSG~fLR~~Npe~~~qH~AKVYG~A~vGAPPmSvpHLDtR~v~Gk~~LlFGPYAGf~~ 319 (487)
T TIGR01320 241 GALPLLQKSGIPE-VKGFAGFPVSGLFLRCSNPELVEQHRAKVYGQASVGAPPMSVPHLDTRVVDGKKSLLFGPYAGFSP 319 (487)
T ss_pred CHHHHHHHCCCCC-CCCCCCCCCCCEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
T ss_conf 1688988667987-665336575550001788799985056215778876488875400010255711210157788883
Q ss_pred ECCCCCCCCCCCC---CCCCEEEE---E---EECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC---CCCEEEEEECCCC
Q ss_conf 2278754210001---23201126---7---507567324553223467887763067546762---1110223202233
Q gi|254780842|r 200 FHKSLGTITQIPL---RENFSSLV---W---IMESQEADFYYKLPVNEIARRLEQYLYPVIGKI---EVVTDVQIFQLSG 267 (384)
Q Consensus 200 ~f~~~G~~a~lP~---~~~~~~iv---w---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~pl~~ 267 (384)
T Consensus 320 kFLk~Gs~~DLP~SirpDNl~s~L~va~~~~~Lt~YLi~~l~-~~~~~R~~ALrey~PeA~~~DWel~vAGQR----VQv 394 (487)
T TIGR01320 320 KFLKHGSLLDLPLSIRPDNLLSMLGVALAEMDLTKYLIGELR-KSKEERLEALREYYPEARDEDWELIVAGQR----VQV 394 (487)
T ss_pred CHHCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHCCCCCCCCCCEEEECCEE----EEE
T ss_conf 120176312065432676512378887752047888998760-693578999974064677988358753616----788
Q ss_pred CCCHHHHHC-----CCCEECCCCCCCCCHHH--HHHHHHHH-HHHHHHHHHHCCCCC--CHHHHH
Q ss_conf 430456537-----94210110011384456--53211212-389999998525799--079999
Q gi|254780842|r 268 MISHCFGKK-----RVVLVGEAAHALPPICG--QGLNLSMR-DVIILLNLFQSEHMS--FRAIGN 322 (384)
Q Consensus 268 ~~~~~~~~~-----rv~liGDAAH~~~P~~G--qG~n~ai~-Da~~L~~~l~~~~~~--~~~~l~ 322 (384)
T Consensus 395 Ik~d~~~~~G~L~FGT~~v~~~dGsiAaLLGASPGAS~Avs~Ml~ll~~CF~~r~~sPeW~~~LK 459 (487)
T TIGR01320 395 IKKDSEKGFGVLEFGTELVADADGSIAALLGASPGASTAVSIMLELLERCFPERARSPEWEDKLK 459 (487)
T ss_pred EECCCCCCCCCCCCHHEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 74177888830120011130567327887367984234589999999750546687876456420