HHsearch alignment for GI: 254780842 and conserved domain: TIGR01789

>TIGR01789 lycopene_cycl lycopene cyclase; InterPro: IPR008461 This family consists of several bacterial Lycopene cyclase (CrtY) proteins. Lycopene cyclase is a key enzyme which converts the acyclic carotenoid lycopene into the cyclic carotenoid beta-carotene .; GO: 0045436 lycopene beta cyclase activity, 0016117 carotenoid biosynthetic process.
Probab=99.04  E-value=1.6e-08  Score=81.39  Aligned_cols=285  Identities=16%  Similarity=0.197  Sum_probs=151.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHC--CCEEEEEECCCCCCCCCEE-----EECHHHHHHHHHCCCHHHHHHCCCCCCCEEEEE
Q ss_conf             299997908999999999978--9859998288555578368-----887889999998899478886047123418994
Q gi|254780842|r    5 DVIIIGSGLAGSVAAIGAAKK--GFLTALVSPRSFLQDLRTT-----MLMGEGIDFLKEINVWDFLQDIAEPVSSFRLVD   77 (384)
Q Consensus         5 DV~IvGaG~aGl~lA~~L~~~--g~~v~iiE~~~~~~~~r~~-----~l~~~s~~~L~~lGl~~~l~~~~~~~~~~~~~~   77 (384)
T Consensus         1 D~i~vGgGLAggLIALrL~~arPd~Ri~~IEa~~~igGNHtWSffd~Dls~~qhawla~lv----------------~~~   64 (392)
T TIGR01789         1 DVIVVGGGLAGGLIALRLQDARPDLRILVIEAAASIGGNHTWSFFDADLSDAQHAWLADLV----------------VYD   64 (392)
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHC----------------CCC
T ss_conf             9788727335789999875259872899984377668875301003666743577765340----------------132


Q ss_pred             CCC-CCCCCCCCCCCCHHCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEE---CCCCCEEEEE
Q ss_conf             257-655454443450222875312011100000000123664798323420565302687178983---0232012111
Q gi|254780842|r   78 ITD-RLITAPDAIFHSSEIGLDAFGYNIPNHVLMESFAEKISQDPLIHCFDALANEIQIGEEEVTIL---LSTGQQIVGQ  153 (384)
Q Consensus        78 ~~~-~~~~~~~~~~~~~~~~~~~~g~~i~r~~L~~~L~~~~~~~~~~~~~~~~v~~i~~~~~~v~v~---~~dg~~i~ad  153 (384)
T Consensus        65 WpgGYeVR-----Fp~~rrkL~taY~S~tStrf~e~l~q~fpe~s~--~~~r~a~~~~--Ad~V~L~PsqyG~g~~i~A~  135 (392)
T TIGR01789        65 WPGGYEVR-----FPKRRRKLKTAYLSMTSTRFREELEQKFPERSV--LLDRKAVEVD--ADAVDLEPSQYGNGRVIRAR  135 (392)
T ss_pred             CCCCCEEC-----CHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEE--EECCEEEEEE--ECEEEECCCCCCCCCEEEEE
T ss_conf             88971333-----555543321022110017789999987687205--6401567766--07566265446896267640


Q ss_pred             EEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEE--------EEEE--CCCCCC---CCCCCCCCCCEEEE
Q ss_conf             2353037543200037873322224304787641147886117--------8872--278754---21000123201126
Q gi|254780842|r  154 FLIGSDGRNSSVRRQMGYGENKWSYPQKALVLNFQHSMPHNGR--------CVEF--HKSLGT---ITQIPLRENFSSLV  220 (384)
Q Consensus       154 lvVgADG~~S~vR~~l~~~~~~~~y~~~~l~~~~~~~~~~~~~--------a~~~--f~~~G~---~a~lP~~~~~~~iv  220 (384)
T Consensus       136 ~VID~Rg~~P~~~L~~GfQ--------~FlG~e~RL~~PHGl~~PiiMDATVdQ~~PhGnGGgYRFVY~LPL~~~~llI-  206 (392)
T TIGR01789       136 AVIDARGFKPSAALKVGFQ--------VFLGREVRLAEPHGLESPIIMDATVDQSDPHGNGGGYRFVYVLPLDAQELLI-  206 (392)
T ss_pred             EEEECCCCCCCCCCCCCHH--------HHHCCCHHCCCCCCCCCCEEECCCHHHCCCCCCCCCEEEEEECCCCCCEEEE-
T ss_conf             2772588877721025323--------4423200015788888870425624211778798740278864798750136-


Q ss_pred             EEECHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCCCCEEEEEECCCC-----CCCHHHHHCCCCEECCCCCCCCCHH
Q ss_conf             75075673245532234678877630---675467621110223202233-----4304565379421011001138445
Q gi|254780842|r  221 WIMESQEADFYYKLPVNEIARRLEQY---LYPVIGKIEVVTDVQIFQLSG-----MISHCFGKKRVVLVGEAAHALPPIC  292 (384)
Q Consensus       221 w~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~pl~~-----~~~~~~~~~rv~liGDAAH~~~P~~  292 (384)
T Consensus       207 --EDTyY~D~-~~L~~~~l~qrI~~YA~a~gW~~~t~~r~-EqGvLPv~l~GD~sa~~~~~~~PG~a~~Glragl~HP~T  282 (392)
T TIGR01789       207 --EDTYYADD-AELDEEALRQRIDDYALAKGWQLATLVRE-EQGVLPVLLAGDSSAYVDKVDIPGLAIAGLRAGLVHPTT  282 (392)
T ss_pred             --EEEEECCC-CCCCHHHHHHHHHHHHHHCCCCHHHHHHH-HCCCCCEEECCCCHHCCCCCCCCCCCHHHHHHCCCCCCC
T ss_conf             --63000588-83878988547899986428610126765-358662301587301124778897401355302447741


Q ss_pred             HHHHHHHHHHHHHHHHHHHC-CCCCCH---HHHHHHHHH
Q ss_conf             65321121238999999852-579907---999999998
Q gi|254780842|r  293 GQGLNLSMRDVIILLNLFQS-EHMSFR---AIGNRYHAM  327 (384)
Q Consensus       293 GqG~n~ai~Da~~L~~~l~~-~~~~~~---~~l~~Y~~~  327 (384)
T Consensus       283 gYslp~AV~~Ad~l~a~~aqrG~lss~~~~~~id~~ar~  321 (392)
T TIGR01789       283 GYSLPVAVEVADALAARDAQRGALSSEDLREAIDSYARE  321 (392)
T ss_pred             CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
T ss_conf             355789999999985201004556778999998765554