HHsearch alignment for GI: 254780842 and conserved domain: TIGR03385
>TIGR03385 CoA_CoA_reduc CoA-disulfide reductase. Members of this protein family are CoA-disulfide reductase (EC 1.8.1.14), as characterized in Staphylococcus aureus, Pyrococcus horikoshii, and Borrelia burgdorferi, and inferred in several other species on the basis of high levels of CoA and an absence of glutathione as a protective thiol.
Probab=98.15 E-value=5.6e-05 Score=55.43 Aligned_cols=99 Identities=15% Similarity=0.177 Sum_probs=64.6
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEECHHHHHHHHHCCCHHHHHHCCCCCCCEEEEECCCCCCC
Q ss_conf 29999790899999999997898599982885555783688878899999988994788860471234189942576554
Q gi|254780842|r 5 DVIIIGSGLAGSVAAIGAAKKGFLTALVSPRSFLQDLRTTMLMGEGIDFLKEINVWDFLQDIAEPVSSFRLVDITDRLIT 84 (384)
Q Consensus 5 DV~IvGaG~aGl~lA~~L~~~g~~v~iiE~~~~~~~~r~~~l~~~s~~~L~~lGl~~~l~~~~~~~~~~~~~~~~~~~~~ 84 (384)
T Consensus 139 ~vvViGgG~IGlE~A~~l~~~G~~Vtvve~~~~il~---~~~d~~~~~-------------------------------- 183 (427)
T TIGR03385 139 RVVIIGGGYIGLEMVEALRERGKNVTLIHRSDKILN---KLFDEEMNQ-------------------------------- 183 (427)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCC---CCCCHHHHH--------------------------------
T ss_conf 899999639999999999976998999984683365---548999999--------------------------------
Q ss_pred CCCCCCCCHHCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEECCCCCEEEEEEEEEECCCCCC
Q ss_conf 54443450222875312011100000000123664798323420565302687178983023201211123530375432
Q gi|254780842|r 85 APDAIFHSSEIGLDAFGYNIPNHVLMESFAEKISQDPLIHCFDALANEIQIGEEEVTILLSTGQQIVGQFLIGSDGRNSS 164 (384)
Q Consensus 85 ~~~~~~~~~~~~~~~~g~~i~r~~L~~~L~~~~~~~~~~~~~~~~v~~i~~~~~~v~v~~~dg~~i~adlvVgADG~~S~ 164 (384)
T Consensus 184 ---------------------------~~~~~l~~~Gv~i~~~~~v~~i~~~--~~~~~l~~g~~i~~D~vi~a~G~~Pn 234 (427)
T TIGR03385 184 ---------------------------IVEEELEKHEIELRLNEEVDSIIGE--ERVGVITSGGVYQADMVILAIGVKPN 234 (427)
T ss_pred ---------------------------HHHHHHHHCCCEEEECCEEEEEECC--CCEEEEECCCEEECCEEEECCCCCCC
T ss_conf ---------------------------9999999759799979889999878--87899946999972899988774676
Q ss_pred CCC
Q ss_conf 000
Q gi|254780842|r 165 VRR 167 (384)
Q Consensus 165 vR~ 167 (384)
T Consensus 235 ~~~ 237 (427)
T TIGR03385 235 SEL 237 (427)
T ss_pred CCC
T ss_conf 424