HHsearch alignment for GI: 254780842 and conserved domain: pfam03486

>pfam03486 HI0933_like HI0933-like protein.
Probab=99.29  E-value=3.4e-11  Score=101.13  Aligned_cols=152  Identities=19%  Similarity=0.213  Sum_probs=87.7

Q ss_pred             EEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCC-------CCCEEEECH--HHHHHHHHCCCHHH-HHHCC---CCC
Q ss_conf             029999790899999999997898599982885555-------783688878--89999998899478-88604---712
Q gi|254780842|r    4 FDVIIIGSGLAGSVAAIGAAKKGFLTALVSPRSFLQ-------DLRTTMLMG--EGIDFLKEINVWDF-LQDIA---EPV   70 (384)
Q Consensus         4 ~DV~IvGaG~aGl~lA~~L~~~g~~v~iiE~~~~~~-------~~r~~~l~~--~s~~~L~~lGl~~~-l~~~~---~~~   70 (384)
T Consensus         1 yDv~VIGgGaaGl~aAi~aa~~g~~V~ilEk~~~~GkKll~tG~GRCN-~TN~~~~~~~~~~~~~~~~fl~~~l~~F~~~   79 (405)
T pfam03486         1 YDVIVIGGGAAGLMAAISAAKRGRRVLLIEKGKKLGRKILISGGGRCN-VTNSVEPDNFLSRYPGNPHFLKSALSRFTPW   79 (405)
T ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCCCCE-ECCCCCHHHHHHHCCCCHHHHHHHHHHCCHH
T ss_conf             979999966999999999986899599995899875015882689614-0789997999862577579999999848999


Q ss_pred             CCEEEEECCCCCCCCCCCCCCCHHCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEECCCCCEE
Q ss_conf             34189942576554544434502228753120111000000001236647983234205653026871789830232012
Q gi|254780842|r   71 SSFRLVDITDRLITAPDAIFHSSEIGLDAFGYNIPNHVLMESFAEKISQDPLIHCFDALANEIQIGEEEVTILLSTGQQI  150 (384)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~r~~L~~~L~~~~~~~~~~~~~~~~v~~i~~~~~~v~v~~~dg~~i  150 (384)
T Consensus        80 d~~~ff~~~-------Gl~~~~e~~G-rvfP~s~~A~~Vl~~L~~~l~~~gV~i~~~~~V~~I~~~~~~~~~v~~~~~~~  151 (405)
T pfam03486        80 DFIAWFEEL-------GVPLKEEDHG-RLFPVSDKASDIVDALLNELKELGVKIRTRTRVLSVEKDDDGRFRVDTGGEEL  151 (405)
T ss_pred             HHHHHHHHC-------CCEEEECCCC-EEECCCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEECCCCEEEEEECCCEE
T ss_conf             999999977-------9905977899-79789898699999999999977978995888789997599459999489589


Q ss_pred             EEEEEEEECCCCCC
Q ss_conf             11123530375432
Q gi|254780842|r  151 VGQFLIGSDGRNSS  164 (384)
Q Consensus       151 ~adlvVgADG~~S~  164 (384)
T Consensus       152 ~a~~vIlAtGG~s~  165 (405)
T pfam03486       152 EADSLVLATGGLSW  165 (405)
T ss_pred             EECEEEEECCCCCC
T ss_conf             72789990488665