HHsearch alignment for GI: 254780842 and conserved domain: pfam03486
>pfam03486 HI0933_like HI0933-like protein.
Probab=99.29 E-value=3.4e-11 Score=101.13 Aligned_cols=152 Identities=19% Similarity=0.213 Sum_probs=87.7
Q ss_pred EEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCC-------CCCEEEECH--HHHHHHHHCCCHHH-HHHCC---CCC
Q ss_conf 029999790899999999997898599982885555-------783688878--89999998899478-88604---712
Q gi|254780842|r 4 FDVIIIGSGLAGSVAAIGAAKKGFLTALVSPRSFLQ-------DLRTTMLMG--EGIDFLKEINVWDF-LQDIA---EPV 70 (384)
Q Consensus 4 ~DV~IvGaG~aGl~lA~~L~~~g~~v~iiE~~~~~~-------~~r~~~l~~--~s~~~L~~lGl~~~-l~~~~---~~~ 70 (384)
T Consensus 1 yDv~VIGgGaaGl~aAi~aa~~g~~V~ilEk~~~~GkKll~tG~GRCN-~TN~~~~~~~~~~~~~~~~fl~~~l~~F~~~ 79 (405)
T pfam03486 1 YDVIVIGGGAAGLMAAISAAKRGRRVLLIEKGKKLGRKILISGGGRCN-VTNSVEPDNFLSRYPGNPHFLKSALSRFTPW 79 (405)
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCCCCE-ECCCCCHHHHHHHCCCCHHHHHHHHHHCCHH
T ss_conf 979999966999999999986899599995899875015882689614-0789997999862577579999999848999
Q ss_pred CCEEEEECCCCCCCCCCCCCCCHHCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEECCCCCEE
Q ss_conf 34189942576554544434502228753120111000000001236647983234205653026871789830232012
Q gi|254780842|r 71 SSFRLVDITDRLITAPDAIFHSSEIGLDAFGYNIPNHVLMESFAEKISQDPLIHCFDALANEIQIGEEEVTILLSTGQQI 150 (384)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~r~~L~~~L~~~~~~~~~~~~~~~~v~~i~~~~~~v~v~~~dg~~i 150 (384)
T Consensus 80 d~~~ff~~~-------Gl~~~~e~~G-rvfP~s~~A~~Vl~~L~~~l~~~gV~i~~~~~V~~I~~~~~~~~~v~~~~~~~ 151 (405)
T pfam03486 80 DFIAWFEEL-------GVPLKEEDHG-RLFPVSDKASDIVDALLNELKELGVKIRTRTRVLSVEKDDDGRFRVDTGGEEL 151 (405)
T ss_pred HHHHHHHHC-------CCEEEECCCC-EEECCCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEECCCCEEEEEECCCEE
T ss_conf 999999977-------9905977899-79789898699999999999977978995888789997599459999489589
Q ss_pred EEEEEEEECCCCCC
Q ss_conf 11123530375432
Q gi|254780842|r 151 VGQFLIGSDGRNSS 164 (384)
Q Consensus 151 ~adlvVgADG~~S~ 164 (384)
T Consensus 152 ~a~~vIlAtGG~s~ 165 (405)
T pfam03486 152 EADSLVLATGGLSW 165 (405)
T ss_pred EECEEEEECCCCCC
T ss_conf 72789990488665