HHsearch alignment for GI: 254780843 and conserved domain: COG0738
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism].
Probab=100.00 E-value=0 Score=299.82 Aligned_cols=406 Identities=36% Similarity=0.632 Sum_probs=342.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
Q ss_conf 75311200599999999999999998738998999999809998999999999999999999999999985262899999
Q gi|254780843|r 2 KDTIARNIQCTKIYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICT 81 (420)
Q Consensus 2 ~~~~~k~~~~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~ 81 (420)
T Consensus 4 ~~~~~~~~~~~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~l 83 (422)
T COG0738 4 DASSSKSVKLAFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVL 83 (422)
T ss_pred CCCCCCCCEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf 21146782018999999999999996221140799999938659999999999999899986149999988424889999
Q ss_pred HHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf 99976432100000013202467899988777567888765310000123035788776644311000034547888886
Q gi|254780843|r 82 GLLIMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVL 161 (420)
Q Consensus 82 ~~~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 161 (420)
T Consensus 84 gL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~l 163 (422)
T COG0738 84 GLLLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSL 163 (422)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999866665112999999999998406888851441698727715688998999986416989999999999
Q ss_pred HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCC---CCCCCCCCCCCCC
Q ss_conf 4123420467765555577898886420011211001345555432101231012332100011---1122211111110
Q gi|254780843|r 162 MLGNLASPNTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFL---KTLDILANPRFTM 238 (420)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 238 (420)
T Consensus 164 ils~---~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 240 (422)
T COG0738 164 ILSG---VALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSLGASGSAGLSSLFQNKHLRL 240 (422)
T ss_pred HHHH---HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHH
T ss_conf 9732---2510488899999999887565089999999999999998435976785651125656413889975748999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 00111000135567789999875420122210124688899998764310011111100000000012455554567689
Q gi|254780843|r 239 GAVCIFLYVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVIL 318 (420)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (420)
T Consensus 241 gvl~~FlYVG~Eva~gsfl~~y~~~~--~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~ 318 (422)
T COG0738 241 GVLAIFLYVGAEVAIGSFLVSYLEEL--LGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLA 318 (422)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_conf 99999999849999999999999865--9963899999999999999999999999999718889999999999999999
Q ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Q ss_conf 96223368999999999999999999999999630156569999999999999999999999999612379999-99999
Q gi|254780843|r 319 SSYTTGFISGWSLIAVGLFNSIMFPTIFSLASASLEDQASGGSGIICTTISGGVIIPLGVGYLVDIASLRDAMF-VPAVC 397 (420)
Q Consensus 319 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~p~i~G~l~d~~g~~~~~~-~~~~~ 397 (420)
T Consensus 319 ~~l~~g~v~~~~l~~ig~F~simfPTIfslal~~l~~~ts~~s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~~~pllc 398 (422)
T COG0738 319 VALIGGVVALYALFLIGLFNSIMFPTIFSLALKNLGEHTSVGSGLLVMAIVGGAIIPPLQGVIADMFGIQLTFLIVPLLC 398 (422)
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99964749999999999986777889999998314765565411333110230388899999997540588878888999
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999999853111
Q gi|254780843|r 398 YIIIAIYGIYCCYKE 412 (420)
Q Consensus 398 ~~~~~~~~~~~~~~~ 412 (420)
T Consensus 399 ~lyV~~~~~~~~~~k 413 (422)
T COG0738 399 YLYVLFFALIGKKSK 413 (422)
T ss_pred HHHHHHHHHHHCCCC
T ss_conf 999999999831355