HHsearch alignment for GI: 254780843 and conserved domain: COG2223

>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism].
Probab=100.00  E-value=2.6e-37  Score=203.32  Aligned_cols=385  Identities=16%  Similarity=0.178  Sum_probs=287.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
Q ss_conf             53112005999999999999999987-38998999999809998999999999999999999999999985262899999
Q gi|254780843|r    3 DTIARNIQCTKIYIFILFFLFGGITS-LNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICT   81 (420)
Q Consensus         3 ~~~~k~~~~~~i~i~~~ff~~g~~~~-~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~   81 (420)
T Consensus         5 ~~~~k~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~   84 (417)
T COG2223           5 EARGKRIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTIL   84 (417)
T ss_pred             HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
T ss_conf             74354400579999999999999999999998865412148898889999999998747899877753401284379999


Q ss_pred             HHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf             99976432100000013202467899988777567888765310000123035788776644311000034547888886
Q gi|254780843|r   82 GLLIMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVL  161 (420)
Q Consensus        82 ~~~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l  161 (420)
T Consensus        85 s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~GasF-av~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v  162 (417)
T COG2223          85 SMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGASF-AVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLV  162 (417)
T ss_pred             HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEE-HCCCCCCCCCCCHHHHHHHHHHHC-CCCCCHHHHHHHHHHH
T ss_conf             99999999999999712875689999999970166300-002544211188544418988760-5530199999988999


Q ss_pred             HHCCCC--CHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCC-CCCCCCCCCCCCCC
Q ss_conf             412342--046776555557789888642001121100134555543210123101233210001-11122211111110
Q gi|254780843|r  162 MLGNLA--SPNTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISF-LKTLDILANPRFTM  238 (420)
Q Consensus       162 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  238 (420)
T Consensus       163 ~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~----~---------~-d~p~~------r~~~~~~~~~~~~~v~~~~~~W~  222 (417)
T COG2223         163 AVAFGFLAWRNVAGIYVVALAIAAVLAWLG----M---------N-DVPEH------RASVKPQLPAQLKAVFSNKDTWL  222 (417)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----H---------C-CCHHH------HCCCCCCCHHHHHHHHCCCCHHH
T ss_conf             999725899999999999999999999998----4---------7-68665------23555320057788863820699


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHH
Q ss_conf             00111000135567789999875420122210124688899998764310011111100000000012455554567689
Q gi|254780843|r  239 GAVCIFLYVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVIL  318 (420)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (420)
T Consensus       223 lsllY~~tFG~Fvgfs~~l~~~~~~~--fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~  300 (417)
T COG2223         223 LSLLYFATFGGFVGFSAYLPMYLVTQ--FGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAAL  300 (417)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999999999986--4987231889999878899999850444433135344799999999999999


Q ss_pred             HHHCC--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH-HH
Q ss_conf             96223--------36899999999999999999999999963015656999999-9999999999999999999612-37
Q gi|254780843|r  319 SSYTT--------GFISGWSLIAVGLFNSIMFPTIFSLASASLEDQASGGSGII-CTTISGGVIIPLGVGYLVDIAS-LR  388 (420)
Q Consensus       319 ~~~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~i~p~i~G~l~d~~g-~~  388 (420)
T Consensus       301 l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~  380 (417)
T COG2223         301 LSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYT  380 (417)
T ss_pred             HHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHEEECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHH
T ss_conf             97056344667643999999999999915676300331318778664678879988542566540489999998426379


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999985311
Q gi|254780843|r  389 DAMFVPAVCYIIIAIYGIYCCYK  411 (420)
Q Consensus       389 ~~~~~~~~~~~~~~~~~~~~~~~  411 (420)
T Consensus       381 ~~f~~~~~~~~~a~v~~~~~y~r  403 (417)
T COG2223         381 GAFMLLLAFYLVALVLTWALYAR  403 (417)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999999971