HHsearch alignment for GI: 254780843 and conserved domain: COG2270
>COG2270 Permeases of the major facilitator superfamily [General function prediction only].
Probab=99.81 E-value=1.6e-17 Score=104.19 Aligned_cols=365 Identities=12% Similarity=-0.010 Sum_probs=214.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH-HHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98999999999999999999999999985262899999-99976432100000013202467899988777567888765
Q gi|254780843|r 44 TYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICT-GLLIMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVA 122 (420)
Q Consensus 44 s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~-~~~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~ 122 (420)
T Consensus 56 ~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vf 135 (438)
T COG2270 56 STAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVF 135 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHEE
T ss_conf 25599999899999999999886466515787205889999999999999998089865999999999998730023300
Q ss_pred HHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC--CCCHHH--------HHHHHHHHHHHHHHHHHHCCC
Q ss_conf 3100001230357887766443110000345478888864123--420467--------765555577898886420011
Q gi|254780843|r 123 LNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGN--LASPNT--------SMLADTMKDYQTDTARVISQM 192 (420)
Q Consensus 123 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~--~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 192 (420)
T Consensus 136 yds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iP 215 (438)
T COG2270 136 YDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALP 215 (438)
T ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 66676540575655740233501364322099999999996065446057762367555643215778999999999808
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
Q ss_conf 21100134555543210123101233210001111222111111100011100013556778999987542012221012
Q gi|254780843|r 193 YLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYVGAEVAIGSIMANYLMRHDTLHLDGI 272 (420)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (420)
T Consensus 216 m~~~v~-~~~~----~~~~~~~~l~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~--~~~gls~~ 288 (438)
T COG2270 216 MILNVH-DAEK----ISSPPPTALRNGFKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGA--ADLGLSST 288 (438)
T ss_pred HHHCCC-CCCC----CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHCCCCHH
T ss_conf 885166-5122----4565417899999999999999962464499999999998239999999999988--87281288
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Q ss_conf 46888999987643100111111000000000124555545676899622336899999-99999999999999999996
Q gi|254780843|r 273 SAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYTTGFISGWSL-IAVGLFNSIMFPTIFSLASA 351 (420)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~ 351 (420)
T Consensus 289 ~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~ 368 (438)
T COG2270 289 ELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLAR 368 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf 99999999999999888999999977088426048999999999999975660999999999998402188888999998
Q ss_pred HHHHHH-HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 301565-69-99999999999999999999999961237-9999999999999999998531110201
Q gi|254780843|r 352 SLEDQA-SG-GSGIICTTISGGVIIPLGVGYLVDIASLR-DAMFVPAVCYIIIAIYGIYCCYKENNFE 416 (420)
Q Consensus 352 ~~~~~~-~~-~~~~~~~~~~g~~i~p~i~G~l~d~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (420)
T Consensus 369 lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~v-ll~iGl~~L~~v~~~~~~~ 435 (438)
T COG2270 369 LVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIV-LLLIGLLLLLRVKVPGRRE 435 (438)
T ss_pred HCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH-HHHHHHHHEEEECCCCCCC
T ss_conf 689852131310254411389999999999999871540128999999-9986176279603788765