HHsearch alignment for GI: 254780843 and conserved domain: COG2814
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism].
Probab=99.37 E-value=7.6e-11 Score=70.68 Aligned_cols=153 Identities=18% Similarity=0.172 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
Q ss_conf 20059999999999999999873899899999980999899999999999999999999999998526289999999976
Q gi|254780843|r 7 RNIQCTKIYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIM 86 (420)
Q Consensus 7 k~~~~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~ 86 (420)
T Consensus 209 ~~p~v~~~l~~t~l~~~g-~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~ 286 (394)
T COG2814 209 RRPGVLLGLLATFLFMTG-HFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLL 286 (394)
T ss_pred CCCHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCHHHHHHHHHHH
T ss_conf 684589999999999816-24448957999987359987688999999989999987777640202-1066999999999
Q ss_pred HHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
Q ss_conf 432100000013202467899988777567888765310000123035788776644311000034547888886412
Q gi|254780843|r 87 SLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLG 164 (420)
Q Consensus 87 ~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 164 (420)
T Consensus 287 a~~~l~l~~~~--~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~ 361 (394)
T COG2814 287 ALALLALTFTG--ASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDA 361 (394)
T ss_pred HHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999831--119999999999999863015678887502-4777437999999999999999999998999981