HHsearch alignment for GI: 254780843 and conserved domain: COG3104
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism].
Probab=99.78 E-value=2.8e-15 Score=92.90 Aligned_cols=154 Identities=16% Similarity=0.211 Sum_probs=123.5
Q ss_pred HHHHHHHHHHHHHHHC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHCCHHCCCCCH
Q ss_conf 8738998999999809----998999999999999999999999999985-26289999999976432100000013202
Q gi|254780843|r 27 TSLNSILVPKLQNSFS----LTYLQAMLVEAIFFSCYFFFSIPAGMFIQR-YGYIKGICTGLLIMSLGCILFTATIEITT 101 (420)
Q Consensus 27 ~~~~~~~~p~l~~~~~----~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr-~Grr~~l~~~~~~~~i~~ll~~~a~~~~~ 101 (420)
T Consensus 38 YGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDrvLG~~~tI~lGail~~iGh~~L~~~~-~~~ 116 (498)
T COG3104 38 YGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISS-VSG 116 (498)
T ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC-CCC
T ss_conf 4159999999998516667858576688999999999998877788888752235779998999999899994654-466
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHH--HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 4678999887775678887653100001230357--88776644311000034547888886412342046776555557
Q gi|254780843|r 102 FKVFLIALCILAIGVVIIQVALNPFISLLGDPNT--AVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSMLADTMK 179 (420)
Q Consensus 102 ~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~--r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~ 179 (420)
T Consensus 117 ~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~ 196 (498)
T COG3104 117 PGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMI 196 (498)
T ss_pred CCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_conf 10899999999836665566678988985599986657775179998504877899999999986068999999999999
Q ss_pred HH
Q ss_conf 78
Q gi|254780843|r 180 DY 181 (420)
Q Consensus 180 ~~ 181 (420)
T Consensus 197 ~g 198 (498)
T COG3104 197 IG 198 (498)
T ss_pred HH
T ss_conf 99