HHsearch alignment for GI: 254780843 and conserved domain: PRK09952
>PRK09952 shikimate transporter; Provisional.
Probab=99.57 E-value=1.3e-12 Score=79.50 Aligned_cols=126 Identities=14% Similarity=0.160 Sum_probs=42.2
Q ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCH-HCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 998099989999999999999999999999999852628999999997643210000-0013202467899988777567
Q gi|254780843|r 38 QNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFT-ATIEITTFKVFLIALCILAIGV 116 (420)
Q Consensus 38 ~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~-~a~~~~~~~~~~~~~~i~g~g~ 116 (420)
T Consensus 278 ~~~l~~~~~~~~~~~~i~~~i~~~~~~~~G~LsDriGRr~~~~~~~l~~~l~~~p~~~~l~~~~~~~~~~~~~~l~~~~~ 357 (438)
T PRK09952 278 TQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAH 357 (438)
T ss_pred HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 98728889999999999999999999999999998363499999999999999999999843868999999999999999
Q ss_pred HHHHHHHHCCHHCCCCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHH
Q ss_conf 8887653100001230357887766443110-0003454788888641
Q gi|254780843|r 117 VIIQVALNPFISLLGDPNTAVSRLTFAQFFN-SLGTAIFPYIGSVLML 163 (420)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~-~~g~~~g~~~~~~l~~ 163 (420)
T Consensus 358 ~~~~~~~~~~l~ElFPt~vR~TG~g~~Ynig~~i~Gg~aP~i~~~L~~ 405 (438)
T PRK09952 358 DMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVT 405 (438)
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999889999999868860557689999999999999999999999999