HHsearch alignment for GI: 254780843 and conserved domain: PRK11010
>PRK11010 ampG muropeptide transporter; Validated.
Probab=99.87 E-value=1.2e-17 Score=104.80 Aligned_cols=384 Identities=11% Similarity=0.075 Sum_probs=228.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----CHHH-HHHHHHHHHH
Q ss_conf 999999999999987389989999998099989999999999999999999999999852-----6289-9999999764
Q gi|254780843|r 14 IYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRY-----GYIK-GICTGLLIMS 87 (420)
Q Consensus 14 i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~-----Grr~-~l~~~~~~~~ 87 (420)
T Consensus 15 ~~~llLGFsSGLPl~L~~~tL~~WLr~~Gvsl~tIGlf-slv~lpY-slKFLWAPlvDr~~~P~LGrRRsWill~Q~~l~ 92 (490)
T PRK11010 15 AILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLL 92 (490)
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99999998500419999979999998879988999999-9999999-999998878856478778734799999999999
Q ss_pred HHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 32100000013202467899988777567888765310000123035788776644311000034547888886412342
Q gi|254780843|r 88 LGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLA 167 (420)
Q Consensus 88 i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 167 (420)
T Consensus 93 ~~l~~ma~~~P~~~l~~~a~~allvAf~SATQDIaiDAyRiE~l~~~eqg~gaa~~v~GYRigmlvsGa~aL~lAd~~~g 172 (490)
T PRK11010 93 VAIAAMGFLEPGTQLRWMAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLGMLVSGGLALWLADRWLG 172 (490)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999997596757999999999999998778999989999836861335899999999999999987999999876226
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 04677655555778988864200112110013455554321012310123321000111122211111110001110001
Q gi|254780843|r 168 SPNTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYV 247 (420)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (420)
T Consensus 173 W~~~Y~~mA~lml~g~~~tl~~pEP-----------------~~~~~~~~~l~~avv~Pf~~Ff~R~~a~lIL~fI~lYK 235 (490)
T PRK11010 173 WQGMYWLMAALLIPCIIATLLAPEP-----------------TDTIPVPKTLEQAVVAPLRDFFGRNNAWLILLLIVLYK 235 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCC-----------------CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf 5999999999999999999838886-----------------55543313799999999999997068999999999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH-HHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHH----C
Q ss_conf 3556778999987542012221012468889999-8764310011111100000000012455554567689962----2
Q gi|254780843|r 248 GAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIY-WGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSY----T 322 (420)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 322 (420)
T Consensus 236 lgDa~~g~M~~pFyl--~dlGFS~~eIa~v~K~~Gl~atI~G~~lGG~li~R~Gl~raL~i~gilqalsNL~f~~LA~~g 313 (490)
T PRK11010 236 LGDAFAMSLTTTFLI--RGVGFDAGEVGVVNKTLGLLATIVGALYGGILMQRLSLFRALLIFGILQGASNAGYWLLSITD 313 (490)
T ss_pred HHHHHHHHHHHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 679999998668877--432888889998885899999999999999999997299999999999996789999999708
Q ss_pred CHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 3368999-999999999999999999999630156-5699-999999999999999999999996123799999999999
Q gi|254780843|r 323 TGFISGW-SLIAVGLFNSIMFPTIFSLASASLEDQ-ASGG-SGIICTTISGGVIIPLGVGYLVDIASLRDAMFVPAVCYI 399 (420)
Q Consensus 323 ~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~g~~i~p~i~G~l~d~~g~~~~~~~~~~~~~ 399 (420)
T Consensus 314 ~~~~~l~~aI~~Enf~~G~gtaAfvAyLssL~n~~ftATQYALlSSl~al~r~~~g~~SG~lve~~Gw~~FFi~t~~~-~ 392 (490)
T PRK11010 314 KNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAA-A 392 (490)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHH-H
T ss_conf 848999999999988878999999999998538322599999999999722563156588984751838799999999-9
Q ss_pred HHHHHHHHHHHHHHCCCCCC
Q ss_conf 99999998531110201279
Q gi|254780843|r 400 IIAIYGIYCCYKENNFEQNT 419 (420)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~ 419 (420)
T Consensus 393 IP~llLL~~~r~~l~~~~~~ 412 (490)
T PRK11010 393 VPGLLLLLVCRQTLEYTQKT 412 (490)
T ss_pred HHHHHHHHHHHHHHHHCCCC
T ss_conf 89999999997353430553