HHsearch alignment for GI: 254780843 and conserved domain: TIGR00712
>TIGR00712 glpT glycerol-3-phosphate transporter; InterPro: IPR005267 This family includes very hydrophobic proteins, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. ; GO: 0015169 glycerol-3-phosphate transmembrane transporter activity, 0015794 glycerol-3-phosphate transport, 0016021 integral to membrane.
Probab=97.90 E-value=1.6e-05 Score=43.99 Aligned_cols=177 Identities=15% Similarity=0.016 Sum_probs=115.0
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHH
Q ss_conf 110001110001355677899998754201222-1012468889999876431001111110000000001245555456
Q gi|254780843|r 236 FTMGAVCIFLYVGAEVAIGSIMANYLMRHDTLH-LDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACS 314 (420)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (420)
T Consensus 27 R~QvF~GIF~GYAaYYlvR~NF~lA~PyL~~~GlfSk~eLG~~lsa~siAYG~SKFiMg~vSDRsNPR~FL~~GL~Lsa~ 106 (468)
T TIGR00712 27 RWQVFIGIFFGYAAYYLVRKNFALAIPYLVEQGLFSKAELGLVLSAVSIAYGFSKFIMGSVSDRSNPRVFLPAGLLLSAI 106 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 99999999998999999987586327056755752103578999999998645678860355676721687788999999
Q ss_pred HHHHHHHCCHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHH----HHH-
Q ss_conf 768996223368-----999999999999999999999999630--15656999999999999999999999----999-
Q gi|254780843|r 315 LVILSSYTTGFI-----SGWSLIAVGLFNSIMFPTIFSLASASL--EDQASGGSGIICTTISGGVIIPLGVG----YLV- 382 (420)
Q Consensus 315 ~~~~~~~~~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~i~p~i~G----~l~- 382 (420)
T Consensus 107 v~~l~~~~PW~TSsiaiMfv~~Fl~GWFQGMGWPPCGRTMvHW~S~~ERGt~vSiWN~AHNiGG~i~~~lv~Lg~A~F~~ 186 (468)
T TIGR00712 107 VMLLMGLVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSKSERGTIVSIWNVAHNIGGGIPAALVLLGIAIFVS 186 (468)
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 99998421403579999999999821104887988544200000235778625762152002530589999999999875
Q ss_pred ------HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf ------96-1237999999999999999999853111
Q gi|254780843|r 383 ------DI-ASLRDAMFVPAVCYIIIAIYGIYCCYKE 412 (420)
Q Consensus 383 ------d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (420)
T Consensus 187 ~~g~ea~akd~W~~~ly~Pa~~Aii~a~~~~~~~RDT 223 (468)
T TIGR00712 187 THGIEAQAKDTWKSALYFPAIIAIIVALLVFLLMRDT 223 (468)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 2010022356678876447999999999998876178