HHsearch alignment for GI: 254780843 and conserved domain: TIGR00896
>TIGR00896 CynX cyanate transporter; InterPro: IPR004747 This family of proteins is involved in active transport of cyanate. The cyanate transporter (CynX) in Escherichia coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=99.97 E-value=1.6e-28 Score=159.34 Aligned_cols=346 Identities=14% Similarity=0.051 Sum_probs=267.4
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHH
Q ss_conf 73899899999980999899999999999999999999999998526289999999976432100000013202467899
Q gi|254780843|r 28 SLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATIEITTFKVFLI 107 (420)
Q Consensus 28 ~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~~~~~~~~~~ 107 (420)
T Consensus 17 TSvgPLL~~~R~~lgmS~~~AGLLT~LP~L~fa~l~~~Ap~LarRfG~eR~v~~~Ll~i~aG~l~R~---~~~~~~~Lf~ 93 (372)
T TIGR00896 17 TSVGPLLEEVRSALGMSASVAGLLTALPVLCFAVLAPLAPKLARRFGEERSVLAGLLLIAAGILIRE---SAPGTALLFA 93 (372)
T ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHC---CCCCHHHHHH
T ss_conf 7488789999877351588899987578999998887545887662527999999999999999830---4773059999
Q ss_pred HHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC-CHHHHHHHHHHHHHHHHHH
Q ss_conf 988777567888765310000123035788776644311000034547888886412342-0467765555577898886
Q gi|254780843|r 108 ALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLA-SPNTSMLADTMKDYQTDTA 186 (420)
Q Consensus 108 ~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~ 186 (420)
T Consensus 94 gtal~G~GIai~nVLlP~lIKR~Fp-~~~g~m~GlYs~al~~gaaLaaa~tVPL~~~~~g~W~~~L~~W~~~allAll~W 172 (372)
T TIGR00896 94 GTALAGVGIAIINVLLPSLIKRDFP-ERVGLMTGLYSMALALGAALAAAATVPLAQALGGRWQQALALWALLALLALLLW 172 (372)
T ss_pred HHHHHHHHHHHHHHHHCCHHCCCCC-CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 9999998999977570301002145-543046789999999887666133245562467841899999999999999820
Q ss_pred HHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 42001121100134555543210123101233210001111222111111100011100013556778999987542012
Q gi|254780843|r 187 RVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYVGAEVAIGSIMANYLMRHDT 266 (420)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (420)
T Consensus 173 ~PQ~-------r~~~a~~~~~~~APrPedGrsaekrael~~~~i~rsp~AW~vt~f~GL~s~~~Y~~igWlP~Ili~--- 242 (372)
T TIGR00896 173 LPQV-------RRRKAANQTAKRAPRPEDGRSAEKRAELTPKRIWRSPLAWQVTVFFGLQSLLYYIVIGWLPAILIS--- 242 (372)
T ss_pred CHHH-------CCCCCHHHCCCCCCCCCCCCCHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
T ss_conf 2020-------142151102677978877640333301576521315058999999989999999999999999986---
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCC-CHHHHHHHHHHHHHHHHHHCCHHHHHH-HHHHHHHHHHHHHHH
Q ss_conf 221012468889999876431001111110000000-001245555456768996223368999-999999999999999
Q gi|254780843|r 267 LHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAE-KTLCAFATTACSLVILSSYTTGFISGW-SLIAVGLFNSIMFPT 344 (420)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~ 344 (420)
T Consensus 243 ~G~sa~~AG~ll~l~~~~~~~~~ll~P~~A~r~kdqR~i~~~~~~~~L~G~~Gl~~~P~~~~~~iW~~~~G~G~G~~f~L 322 (372)
T TIGR00896 243 HGVSAATAGLLLALMQLAQLASALLIPLLASRVKDQRGIVVVVAVLQLVGLCGLLFAPLHGLWAIWALVLGLGQGGAFSL 322 (372)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf 38877568999999999987689998899704885699999999999999999998504599999999983012036999
Q ss_pred HHHHHHHHHHHHH--HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999996301565--6999999-99999999999999999996123
Q gi|254780843|r 345 IFSLASASLEDQA--SGGSGII-CTTISGGVIIPLGVGYLVDIASL 387 (420)
Q Consensus 345 ~~~~~~~~~~~~~--~~~~~~~-~~~~~g~~i~p~i~G~l~d~~g~ 387 (420)
T Consensus 323 aLtli~lRs~~a~~AA~LS~maQs~GYllA~~GP~~vG~L~d~~g~ 368 (372)
T TIGR00896 323 ALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLLVGVLHDISGN 368 (372)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 9999999621688999998887889999986458888888721568