HHsearch alignment for GI: 254780843 and conserved domain: TIGR00896
>TIGR00896 CynX cyanate transporter; InterPro: IPR004747 This family of proteins is involved in active transport of cyanate. The cyanate transporter (CynX) in Escherichia coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=98.84 E-value=1e-07 Score=54.95 Aligned_cols=139 Identities=14% Similarity=-0.003 Sum_probs=102.9
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHH
Q ss_conf 7389989999998099989999999999999999999999999852-628999999997643210000001320246789
Q gi|254780843|r 28 SLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRY-GYIKGICTGLLIMSLGCILFTATIEITTFKVFL 106 (420)
Q Consensus 28 ~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~-Grr~~l~~~~~~~~i~~ll~~~a~~~~~~~~~~ 106 (420)
T Consensus 230 Y~~igWlP~Ili~~G~sa~~AG~ll~l~~~~~~~~~ll~P~~A~r~kdqR~i~~~~~~~~L~G~~Gl~~~P~~---~~~~ 306 (372)
T TIGR00896 230 YIVIGWLPAILISHGVSAATAGLLLALMQLAQLASALLIPLLASRVKDQRGIVVVVAVLQLVGLCGLLFAPLH---GLWA 306 (372)
T ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH---HHHH
T ss_conf 9999999999986388775689999999999876899988997048856999999999999999999985045---9999
Q ss_pred HHHHHHHHHHHHHHHHHHCCHHCCCC-HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCH
Q ss_conf 99887775678887653100001230-3578877664431100003454788888641234204
Q gi|254780843|r 107 IALCILAIGVVIIQVALNPFISLLGD-PNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASP 169 (420)
Q Consensus 107 ~~~~i~g~g~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~ 169 (420)
T Consensus 307 iW~~~~G~G~G~~f~LaLtli~lRs~~a~~AA~LS~maQs~GYllA~~GP~~vG~L~d~~g~w~ 370 (372)
T TIGR00896 307 IWALVLGLGQGGAFSLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLLVGVLHDISGNWL 370 (372)
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 9999983012036999999999962168899999888788999998645888888872156889