HHsearch alignment for GI: 254780843 and conserved domain: TIGR00897
>TIGR00897 2A0118 polyol permease; InterPro: IPR004748 Proteins in this entry are mostly known or predicted polyol transporters. The best characterised of these proteins are DalT and RbtT from Klebsiella pneumoniae, which tranpsort D-arabinatol and ribotol respectively. Like other members of the Major Facilitator Superfamily (MFS), DalT and RbtT appear to be secondary transporters capable only of transporting solutes in response to chemiosmotic ion gradients . They contain a total of twelve predicted transmembrane helices; six in the N-terminal portion of the protein, and six in the C-terminal portion. Residues defining substrate specificity lie in the N-terminal region of these proteins.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=99.90 E-value=3.1e-20 Score=117.75 Aligned_cols=375 Identities=14% Similarity=0.148 Sum_probs=252.6
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
Q ss_conf 59999999999999999873-89989999998099989999999999999999999999999852628999999997643
Q gi|254780843|r 10 QCTKIYIFILFFLFGGITSL-NSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSL 88 (420)
Q Consensus 10 ~~~~i~i~~~ff~~g~~~~~-~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i 88 (420)
T Consensus 19 ~l~WGyigvv~FM~G--DGlE~gwLSpfl-~~~Gls~~~sas~Ft~YGiA~aisaW~SGv~~e~~gp~kTM~~Gll~~~~ 95 (411)
T TIGR00897 19 RLLWGYIGVVVFMVG--DGLEQGWLSPFL-VELGLSVQQSASLFTLYGIAVAISAWLSGVVVEIIGPKKTMMIGLLLYVV 95 (411)
T ss_pred HHHHHHHHHHHHHCC--CCHHHHHHHHHH-HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf 676677764220125--635475532899-96188887899999999999999988888999864221678999999999
Q ss_pred HHHCCH-HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHH-HHHHHHHHHHHHCCC
Q ss_conf 210000-001320246789998877756788876531000012303578877664431100003-454788888641234
Q gi|254780843|r 89 GCILFT-ATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGT-AIFPYIGSVLMLGNL 166 (420)
Q Consensus 89 ~~ll~~-~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~-~~g~~~~~~l~~~~~ 166 (420)
T Consensus 96 g~aaFivfg~~h~nyp~~l~~Y~~rGlgYPLFaYSFlvwv~y~~~~~~ls~AvGWFW~~y~~G~~VfG~~ysSyaipafG 175 (411)
T TIGR00897 96 GSAAFIVFGLEHLNYPLLLLFYAIRGLGYPLFAYSFLVWVVYNTKQDKLSSAVGWFWIVYSIGLGVFGSYYSSYAIPAFG 175 (411)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEECCHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
T ss_conf 99999998688888999999888884021788887672220212411003317899999997465430122012555303
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 20467765555577898886420011211001345555432101231012332100011112221111111000111000
Q gi|254780843|r 167 ASPNTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLY 246 (420)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (420)
T Consensus 176 e~nTLWsal~fv~~Gg~~-------------AL~~~kd~ftp~~~qnlt~~ek~~EL~ka~TilftNp~vl~gg~vriIN 242 (411)
T TIGR00897 176 ELNTLWSALLFVLTGGVL-------------ALFINKDKFTPKKKQNLTTREKFEELGKAVTILFTNPKVLLGGVVRIIN 242 (411)
T ss_pred CHHHHHHHHHHHHHHHHH-------------HHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHEECCCCCHHHHHHHHH
T ss_conf 234689999999998999-------------9998752058066524666700677740000201078400002788776
Q ss_pred HHHHHHHHHHHH-HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHH-HHCCH
Q ss_conf 135567789999-8754201222101246888999987643100111111000000000124555545676899-62233
Q gi|254780843|r 247 VGAEVAIGSIMA-NYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILS-SYTTG 324 (420)
Q Consensus 247 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 324 (420)
T Consensus 243 ~ig~fGFavflPmm~~-a--~~G~StseWLQiWg~~Ff~nIvfN~ifGivGdKlGW~~~V~WFGgvG~giftlalYY~P~ 319 (411)
T TIGR00897 243 TIGLFGFAVFLPMMFL-A--ELGFSTSEWLQIWGTLFFTNIVFNVIFGIVGDKLGWKNTVIWFGGVGCGIFTLALYYIPQ 319 (411)
T ss_pred HHHHCCHHHHHHHHHH-H--HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHH
T ss_conf 1322134676358999-7--638740258999999999999999999754144687316676376458999999986566
Q ss_pred HH--HHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 68--99999----99999999999999999996301565699-9999999999999999999999961237999999999
Q gi|254780843|r 325 FI--SGWSL----IAVGLFNSIMFPTIFSLASASLEDQASGG-SGIICTTISGGVIIPLGVGYLVDIASLRDAMFVPAVC 397 (420)
Q Consensus 325 ~~--~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~i~p~i~G~l~d~~g~~~~~~~~~~~ 397 (420)
T Consensus 320 ~~Ghs~av~~iia~~~G~~lAgyVP-l~A~~Ptlapk~KGAA~SVlNL~aGlsaF~aPaia~lfig~~ga~GVv~ifaAL 398 (411)
T TIGR00897 320 FIGHSFAVVLIIAIIYGILLAGYVP-LAAVLPTLAPKDKGAAMSVLNLSAGLSAFVAPAIAVLFIGLLGAIGVVWIFAAL 398 (411)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 5225899999999999999986634-887422348998731564888886288788899999998500202799999999
Q ss_pred HHHHHHH
Q ss_conf 9999999
Q gi|254780843|r 398 YIIIAIY 404 (420)
Q Consensus 398 ~~~~~~~ 404 (420)
T Consensus 399 Y~~safL 405 (411)
T TIGR00897 399 YLVSAFL 405 (411)
T ss_pred HHHHHHH
T ss_conf 9999999