HHsearch alignment for GI: 254780843 and conserved domain: TIGR00897

>TIGR00897 2A0118 polyol permease; InterPro: IPR004748 Proteins in this entry are mostly known or predicted polyol transporters. The best characterised of these proteins are DalT and RbtT from Klebsiella pneumoniae, which tranpsort D-arabinatol and ribotol respectively. Like other members of the Major Facilitator Superfamily (MFS), DalT and RbtT appear to be secondary transporters capable only of transporting solutes in response to chemiosmotic ion gradients . They contain a total of twelve predicted transmembrane helices; six in the N-terminal portion of the protein, and six in the C-terminal portion. Residues defining substrate specificity lie in the N-terminal region of these proteins.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=99.90  E-value=3.1e-20  Score=117.75  Aligned_cols=375  Identities=14%  Similarity=0.148  Sum_probs=252.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
Q ss_conf             59999999999999999873-89989999998099989999999999999999999999999852628999999997643
Q gi|254780843|r   10 QCTKIYIFILFFLFGGITSL-NSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSL   88 (420)
Q Consensus        10 ~~~~i~i~~~ff~~g~~~~~-~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i   88 (420)
T Consensus        19 ~l~WGyigvv~FM~G--DGlE~gwLSpfl-~~~Gls~~~sas~Ft~YGiA~aisaW~SGv~~e~~gp~kTM~~Gll~~~~   95 (411)
T TIGR00897        19 RLLWGYIGVVVFMVG--DGLEQGWLSPFL-VELGLSVQQSASLFTLYGIAVAISAWLSGVVVEIIGPKKTMMIGLLLYVV   95 (411)
T ss_pred             HHHHHHHHHHHHHCC--CCHHHHHHHHHH-HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf             676677764220125--635475532899-96188887899999999999999988888999864221678999999999


Q ss_pred             HHHCCH-HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHH-HHHHHHHHHHHHCCC
Q ss_conf             210000-001320246789998877756788876531000012303578877664431100003-454788888641234
Q gi|254780843|r   89 GCILFT-ATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGT-AIFPYIGSVLMLGNL  166 (420)
Q Consensus        89 ~~ll~~-~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~-~~g~~~~~~l~~~~~  166 (420)
T Consensus        96 g~aaFivfg~~h~nyp~~l~~Y~~rGlgYPLFaYSFlvwv~y~~~~~~ls~AvGWFW~~y~~G~~VfG~~ysSyaipafG  175 (411)
T TIGR00897        96 GSAAFIVFGLEHLNYPLLLLFYAIRGLGYPLFAYSFLVWVVYNTKQDKLSSAVGWFWIVYSIGLGVFGSYYSSYAIPAFG  175 (411)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEECCHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
T ss_conf             99999998688888999999888884021788887672220212411003317899999997465430122012555303


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             20467765555577898886420011211001345555432101231012332100011112221111111000111000
Q gi|254780843|r  167 ASPNTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLY  246 (420)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (420)
T Consensus       176 e~nTLWsal~fv~~Gg~~-------------AL~~~kd~ftp~~~qnlt~~ek~~EL~ka~TilftNp~vl~gg~vriIN  242 (411)
T TIGR00897       176 ELNTLWSALLFVLTGGVL-------------ALFINKDKFTPKKKQNLTTREKFEELGKAVTILFTNPKVLLGGVVRIIN  242 (411)
T ss_pred             CHHHHHHHHHHHHHHHHH-------------HHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHEECCCCCHHHHHHHHH
T ss_conf             234689999999998999-------------9998752058066524666700677740000201078400002788776


Q ss_pred             HHHHHHHHHHHH-HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHH-HHCCH
Q ss_conf             135567789999-8754201222101246888999987643100111111000000000124555545676899-62233
Q gi|254780843|r  247 VGAEVAIGSIMA-NYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILS-SYTTG  324 (420)
Q Consensus       247 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  324 (420)
T Consensus       243 ~ig~fGFavflPmm~~-a--~~G~StseWLQiWg~~Ff~nIvfN~ifGivGdKlGW~~~V~WFGgvG~giftlalYY~P~  319 (411)
T TIGR00897       243 TIGLFGFAVFLPMMFL-A--ELGFSTSEWLQIWGTLFFTNIVFNVIFGIVGDKLGWKNTVIWFGGVGCGIFTLALYYIPQ  319 (411)
T ss_pred             HHHHCCHHHHHHHHHH-H--HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHH
T ss_conf             1322134676358999-7--638740258999999999999999999754144687316676376458999999986566


Q ss_pred             HH--HHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             68--99999----99999999999999999996301565699-9999999999999999999999961237999999999
Q gi|254780843|r  325 FI--SGWSL----IAVGLFNSIMFPTIFSLASASLEDQASGG-SGIICTTISGGVIIPLGVGYLVDIASLRDAMFVPAVC  397 (420)
Q Consensus       325 ~~--~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~i~p~i~G~l~d~~g~~~~~~~~~~~  397 (420)
T Consensus       320 ~~Ghs~av~~iia~~~G~~lAgyVP-l~A~~Ptlapk~KGAA~SVlNL~aGlsaF~aPaia~lfig~~ga~GVv~ifaAL  398 (411)
T TIGR00897       320 FIGHSFAVVLIIAIIYGILLAGYVP-LAAVLPTLAPKDKGAAMSVLNLSAGLSAFVAPAIAVLFIGLLGAIGVVWIFAAL  398 (411)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf             5225899999999999999986634-887422348998731564888886288788899999998500202799999999


Q ss_pred             HHHHHHH
Q ss_conf             9999999
Q gi|254780843|r  398 YIIIAIY  404 (420)
Q Consensus       398 ~~~~~~~  404 (420)
T Consensus       399 Y~~safL  405 (411)
T TIGR00897       399 YLVSAFL  405 (411)
T ss_pred             HHHHHHH
T ss_conf             9999999