>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter); InterPro: IPR005279 The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The PTR family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analysis of a number of recently discovered peptide transport proteins . This family consists of bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists. .

Probab=99.23 E-value=6.8e-09 Score=60.88 Aligned_cols=147 Identities=16% Similarity=0.237 Sum_probs=118.2 Q ss_pred HHHHHHHHHHHHHH-----HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHCCHHCCCCC Q ss_conf 87389989999998-----09998999999999999999999999999985-2628999999997643210000001320 Q gi|254780843|r 27 TSLNSILVPKLQNS-----FSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQR-YGYIKGICTGLLIMSLGCILFTATIEIT 100 (420) Q Consensus 27 ~~~~~~~~p~l~~~-----~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr-~Grr~~l~~~~~~~~i~~ll~~~a~~~~ 100 (420) T Consensus 31 YG~qgiL~~ylv~~~dkGGLG~~~~~a~~i~gays~lVYll~~~G~wfgDrVwG~~kT~~l~giV~~lGh~~la~~~--~ 108 (501) T TIGR00924 31 YGMQGILAVYLVAQADKGGLGLDKELATAIFGAYSALVYLLTIVGAWFGDRVWGAKKTLVLAGIVVMLGHLVLALSI--Y 108 (501) T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCEEECCHHHHHHHHHHHHHHHHHHHCCC--C T ss_conf 78999999986405776566656451021225789999999851413201112530433456599998899972166--6 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHH----HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHH Q ss_conf 24678999887775678887653100001230357----8877664431100003454788888641234204677655 Q gi|254780843|r 101 TFKVFLIALCILAIGVVIIQVALNPFISLLGDPNT----AVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSMLA 175 (420) Q Consensus 101 ~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~----r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~ 175 (420) T Consensus 109 n~~~~~~gLg~iA~Gsgl~Kan~ssmvg~lYe~~d~rPrrDggFt~FYm~INiG~f~~pll~g~i~en~g~h~gf~laa 187 (501) T TIGR00924 109 NSDLLFIGLGLIAVGSGLLKANASSMVGKLYERDDDRPRRDGGFTVFYMSINIGSFISPLLIGVIAENVGYHLGFALAA 187 (501) T ss_pred CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH T ss_conf 5468999999998723524422899999851698998440221136788998999998887536765224267888999

HHsearch alignment for GI: 254780843 and conserved domain: TIGR00924