Query gi|254780843|ref|YP_003065256.1| glucose/galactose transporter [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 420
No_of_seqs 837 out of 10034
Neff 12.4
Searched_HMMs 39220
Date Mon May 30 00:41:00 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780843.hhm -d /home/congqian_1/database/cdd/Cdd.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK10133 L-fucose transporter; 100.0 0 0 315.1 34.8 409 4-414 19-438 (438)
2 COG0738 FucP Fucose permease [ 100.0 0 0 299.8 28.3 406 2-412 4-413 (422)
3 PRK03699 hypothetical protein; 100.0 0 0 283.3 37.1 374 6-406 2-377 (394)
4 PRK11551 putative 3-hydroxyphe 100.0 0 0 275.1 35.0 395 1-417 3-404 (406)
5 PRK11663 regulatory protein Uh 100.0 0 0 275.9 33.0 403 2-412 10-427 (434)
6 PRK11273 glpT sn-glycerol-3-ph 100.0 0 0 270.5 33.2 411 4-417 18-443 (452)
7 PRK03545 sugar efflux transpor 100.0 0 0 254.6 34.9 386 4-418 1-389 (390)
8 PRK12307 putative sialic acid 100.0 0 0 254.0 33.4 401 3-419 10-420 (426)
9 PRK09874 drug efflux system pr 100.0 0 0 249.2 35.4 386 5-414 6-401 (406)
10 PRK03893 putative sialic acid 100.0 0 0 246.6 34.6 410 3-418 5-457 (486)
11 PRK10091 MFS transport protein 100.0 2.8E-45 0 243.4 35.4 382 10-420 2-387 (389)
12 PRK09556 uhpT sugar phosphate 100.0 0 0 248.9 29.5 396 3-402 18-437 (463)
13 PRK10473 multidrug efflux syst 100.0 1.4E-45 0 244.7 33.8 379 16-420 8-389 (392)
14 TIGR00895 2A0115 MFS transport 100.0 0 0 249.1 28.8 376 1-381 7-412 (413)
15 PRK11652 emrD multidrug resist 100.0 2.8E-45 0 243.8 31.9 382 5-414 1-388 (394)
16 PRK11102 bicyclomycin/multidru 100.0 1.7E-44 0 239.3 30.9 367 25-414 5-377 (377)
17 PRK11043 inner membrane transp 100.0 3E-43 0 233.1 33.8 376 10-417 5-387 (401)
18 PRK05122 major facilitator sup 100.0 2.2E-42 0 228.8 35.8 366 14-412 20-394 (395)
19 PRK12382 hypothetical protein; 100.0 1.4E-42 0 229.8 34.4 369 12-413 16-393 (393)
20 PRK10504 multidrug efflux syst 100.0 2.2E-42 0 228.7 34.2 378 1-384 1-415 (471)
21 TIGR00885 fucP L-fucose:H+ sym 100.0 1.5E-44 0 239.6 22.3 395 11-405 3-424 (427)
22 TIGR00893 2A0114 d-galactonate 100.0 3.5E-41 1.4E-45 222.7 31.8 373 25-399 8-417 (427)
23 PRK10054 putative MFS-type tra 100.0 4.4E-39 1.1E-43 212.2 35.0 387 1-418 1-392 (395)
24 COG2814 AraJ Arabinose efflux 100.0 1.9E-39 4.9E-44 214.0 32.8 386 3-416 5-393 (394)
25 PRK11646 multidrug resistance 100.0 1.3E-39 3.4E-44 214.8 31.6 374 16-418 15-396 (400)
26 cd06174 MFS The Major Facilita 100.0 8E-38 2E-42 205.9 35.6 344 14-406 2-349 (352)
27 PRK10213 nepI ribonucleoside t 100.0 4.7E-38 1.2E-42 207.1 33.7 371 3-402 12-384 (394)
28 PRK09705 cynX putative cyanate 100.0 2.1E-37 5.4E-42 203.8 35.1 373 9-411 3-383 (393)
29 pfam00083 Sugar_tr Sugar (and 100.0 5.7E-38 1.5E-42 206.7 31.1 393 16-414 5-439 (449)
30 COG2271 UhpC Sugar phosphate p 100.0 4.6E-40 1.1E-44 217.2 19.9 384 20-410 38-435 (448)
31 pfam07690 MFS_1 Major Facilita 100.0 4.3E-38 1.1E-42 207.3 28.2 337 17-375 2-345 (345)
32 TIGR00710 efflux_Bcr_CflA drug 100.0 2E-37 5E-42 203.9 30.1 354 12-387 5-379 (400)
33 PRK03633 putative MFS family t 100.0 4E-36 1E-40 197.4 35.0 355 13-401 8-364 (381)
34 TIGR00881 2A0104 phosphoglycer 100.0 1.3E-38 3.2E-43 209.9 21.1 369 20-390 4-403 (404)
35 COG2223 NarK Nitrate/nitrite t 100.0 2.6E-37 6.7E-42 203.3 26.6 385 3-411 5-403 (417)
36 PRK10642 proline/glycine betai 100.0 4.6E-34 1.2E-38 187.0 31.1 394 6-413 11-433 (490)
37 TIGR00711 efflux_EmrB drug res 100.0 1.1E-34 2.7E-39 190.2 27.5 365 14-383 5-415 (501)
38 KOG2532 consensus 100.0 5.7E-35 1.5E-39 191.6 21.7 376 38-418 65-457 (466)
39 PRK10077 xylE D-xylose transpo 100.0 1.8E-32 4.6E-37 179.1 34.2 411 1-415 1-469 (486)
40 PRK09952 shikimate transporter 100.0 3.4E-32 8.7E-37 177.7 32.7 386 10-414 21-437 (438)
41 PRK10489 enterobactin exporter 100.0 1.3E-30 3.3E-35 169.8 35.9 392 5-420 13-409 (416)
42 PRK10406 alpha-ketoglutarate t 100.0 3.6E-31 9.2E-36 172.5 30.7 386 5-415 16-430 (432)
43 TIGR00883 2A0106 MFS transport 100.0 1.8E-31 4.5E-36 174.1 28.3 373 25-401 7-411 (413)
44 TIGR00894 2A0114euk Na(+)-depe 100.0 5.6E-34 1.4E-38 186.6 15.1 382 34-418 80-490 (514)
45 KOG2533 consensus 100.0 4.8E-32 1.2E-36 176.9 20.8 373 29-408 64-456 (495)
46 TIGR00892 2A0113 monocarboxyla 100.0 7.2E-32 1.8E-36 176.0 19.5 392 7-406 19-436 (475)
47 pfam05977 DUF894 Bacterial pro 100.0 1.7E-28 4.4E-33 159.1 34.9 383 7-410 8-395 (524)
48 KOG2504 consensus 100.0 8.7E-30 2.2E-34 165.6 24.7 389 11-406 43-473 (509)
49 COG2807 CynX Cyanate permease 100.0 2.1E-28 5.4E-33 158.7 30.4 363 21-413 18-389 (395)
50 PRK09528 lacY galactoside perm 100.0 5.5E-28 1.4E-32 156.6 31.6 382 21-418 18-410 (418)
51 KOG1330 consensus 100.0 1.4E-31 3.6E-36 174.6 11.3 355 22-388 44-417 (493)
52 TIGR00896 CynX cyanate transpo 100.0 1.6E-28 4E-33 159.3 26.4 346 28-387 17-368 (372)
53 TIGR00898 2A0119 cation transp 100.0 9.6E-29 2.4E-33 160.4 24.8 379 32-418 123-556 (557)
54 TIGR00891 2A0112 MFS transport 100.0 5E-30 1.3E-34 166.8 16.1 376 3-386 4-428 (453)
55 TIGR00712 glpT glycerol-3-phos 100.0 1.2E-29 3.1E-34 164.9 17.9 407 5-414 19-468 (468)
56 pfam06609 TRI12 Fungal trichot 100.0 8.8E-27 2.2E-31 150.6 32.0 163 7-174 38-202 (598)
57 pfam01306 LacY_symp LacY proto 100.0 9.6E-27 2.5E-31 150.4 29.3 378 21-414 17-405 (413)
58 KOG0569 consensus 100.0 2.5E-26 6.4E-31 148.3 27.7 413 1-414 1-459 (485)
59 TIGR00879 SP MFS transporter, 100.0 5E-27 1.3E-31 151.8 23.3 399 18-416 80-568 (572)
60 TIGR00886 2A0108 nitrite trans 100.0 1.6E-26 4.1E-31 149.3 21.0 337 15-354 4-434 (472)
61 TIGR00890 2A0111 Oxalate/Forma 100.0 2.9E-25 7.4E-30 143.0 24.8 382 11-400 4-425 (429)
62 PRK11902 ampG muropeptide tran 100.0 2.2E-23 5.6E-28 133.5 33.1 382 16-418 4-399 (402)
63 TIGR01272 gluP glucose/galacto 99.9 1.5E-25 3.8E-30 144.4 19.5 309 96-404 4-322 (322)
64 KOG0254 consensus 99.9 2.9E-23 7.3E-28 133.0 30.7 164 10-176 44-216 (513)
65 pfam03825 Nuc_H_symport Nucleo 99.9 6.9E-23 1.8E-27 131.0 32.3 373 18-411 9-398 (400)
66 KOG0255 consensus 99.9 9.4E-23 2.4E-27 130.4 31.4 333 38-383 110-467 (521)
67 KOG2615 consensus 99.9 8.9E-25 2.3E-29 140.5 18.2 364 22-392 44-423 (451)
68 PRK11195 major facilitator fam 99.9 9.5E-23 2.4E-27 130.3 27.6 397 13-419 5-406 (415)
69 PRK11128 putative 3-phenylprop 99.9 2.4E-21 6.1E-26 123.3 32.8 345 25-397 18-366 (383)
70 TIGR00899 2A0120 sugar efflux 99.9 2.1E-21 5.3E-26 123.6 31.2 363 18-408 4-374 (377)
71 KOG3764 consensus 99.9 6.8E-25 1.7E-29 141.1 12.7 331 39-396 99-441 (464)
72 TIGR00900 2A0121 H+ Antiporter 99.9 1.4E-22 3.5E-27 129.6 23.5 356 21-386 9-387 (387)
73 PRK08633 2-acyl-glycerophospho 99.9 1.1E-20 2.8E-25 120.0 30.1 394 1-406 3-412 (1150)
74 KOG4686 consensus 99.9 9.1E-25 2.3E-29 140.5 7.2 389 25-419 58-454 (459)
75 KOG0252 consensus 99.9 5.8E-23 1.5E-27 131.4 16.0 391 15-408 45-497 (538)
76 PRK09584 tppB putative tripept 99.9 3.6E-19 9.2E-24 112.4 33.8 151 27-179 38-191 (500)
77 TIGR00897 2A0118 polyol permea 99.9 3.1E-20 7.8E-25 117.8 26.4 375 10-404 19-405 (411)
78 TIGR02332 HpaX 4-hydroxyphenyl 99.9 9.4E-21 2.4E-25 120.3 22.1 387 5-396 2-408 (412)
79 pfam11700 ATG22 Vacuole efflux 99.9 1.1E-18 2.8E-23 109.9 30.0 366 46-418 69-476 (477)
80 PRK10207 inner membrane transp 99.9 2.5E-18 6.4E-23 108.2 31.7 146 27-174 31-179 (490)
81 PRK10429 melibiose:sodium symp 99.9 2.8E-18 7.2E-23 107.9 29.9 368 1-387 1-396 (473)
82 PRK11010 ampG muropeptide tran 99.9 1.2E-17 3E-22 104.8 31.5 384 14-419 15-412 (490)
83 PRK06814 acylglycerophosphoeth 99.9 5.5E-18 1.4E-22 106.5 28.8 376 13-406 14-420 (1139)
84 KOG0253 consensus 99.9 3.4E-20 8.7E-25 117.5 15.9 374 30-411 97-521 (528)
85 PRK09848 glucuronide transport 99.8 4.3E-17 1.1E-21 102.0 29.3 366 1-387 1-391 (457)
86 PRK09669 putative symporter Ya 99.8 1.3E-16 3.3E-21 99.6 30.5 343 27-387 23-389 (442)
87 TIGR00880 2_A_01_02 Multidrug 99.8 1.2E-19 3E-24 114.8 13.4 134 49-183 1-139 (148)
88 pfam03137 OATP Organic Anion T 99.8 4.8E-19 1.2E-23 111.8 15.8 288 13-302 5-369 (582)
89 PRK11462 putative transporter; 99.8 1.5E-16 3.8E-21 99.3 27.7 344 27-387 25-390 (460)
90 KOG2563 consensus 99.8 1.6E-19 4E-24 114.2 12.4 378 29-417 63-460 (480)
91 COG2270 Permeases of the major 99.8 1.6E-17 4E-22 104.2 20.9 365 44-416 56-435 (438)
92 PRK12382 hypothetical protein; 99.8 7.5E-18 1.9E-22 105.8 18.8 150 21-175 226-375 (393)
93 COG2211 MelB Na+/melibiose sym 99.8 1.2E-16 3.1E-21 99.7 22.3 371 3-387 3-399 (467)
94 PRK11551 putative 3-hydroxyphe 99.8 4.2E-17 1.1E-21 102.0 19.7 166 10-178 219-384 (406)
95 PRK03893 putative sialic acid 99.8 7.4E-17 1.9E-21 100.8 20.0 141 30-171 287-428 (486)
96 PRK05122 major facilitator sup 99.8 6.3E-17 1.6E-21 101.2 19.1 152 20-176 227-378 (395)
97 PRK09874 drug efflux system pr 99.8 5.2E-17 1.3E-21 101.6 18.4 152 18-172 224-379 (406)
98 PRK10642 proline/glycine betai 99.8 3.8E-17 9.8E-22 102.2 17.5 147 25-171 264-411 (490)
99 COG3104 PTR2 Dipeptide/tripept 99.8 2.8E-15 7.1E-20 92.9 26.8 154 27-181 38-198 (498)
100 PRK03633 putative MFS family t 99.8 9.6E-17 2.4E-21 100.2 18.9 152 20-177 209-360 (381)
101 PTZ00207 hypothetical protein; 99.8 1.6E-16 4E-21 99.2 19.6 151 5-157 21-174 (591)
102 pfam03209 PUCC PUCC protein. T 99.7 8.1E-15 2.1E-19 90.6 24.8 352 36-403 5-391 (402)
103 PRK12307 putative sialic acid 99.7 1.2E-15 3.1E-20 94.7 19.1 142 29-171 249-390 (426)
104 TIGR00882 2A0105 oligosacchari 99.7 1.4E-15 3.7E-20 94.3 19.0 369 21-408 12-395 (397)
105 KOG2325 consensus 99.7 6.3E-18 1.6E-22 106.2 6.5 161 3-164 25-191 (488)
106 pfam07690 MFS_1 Major Facilita 99.7 7.2E-16 1.8E-20 95.9 15.9 137 19-155 209-345 (345)
107 KOG2816 consensus 99.7 1.1E-14 2.8E-19 89.9 19.3 366 9-385 20-393 (463)
108 PRK10504 multidrug efflux syst 99.7 1.2E-14 3E-19 89.7 16.5 41 47-87 135-175 (471)
109 PRK11646 multidrug resistance 99.6 2E-14 5.1E-19 88.6 15.8 136 29-167 226-362 (400)
110 PRK10091 MFS transport protein 99.6 1.2E-13 3E-18 84.7 18.5 156 20-178 209-364 (389)
111 TIGR00887 2A0109 phosphate:H+ 99.6 1.1E-14 2.7E-19 90.0 12.8 398 16-417 25-553 (557)
112 pfam03092 BT1 BT1 family. Memb 99.6 1.2E-12 3.1E-17 79.6 22.6 342 32-386 11-375 (425)
113 PRK03545 sugar efflux transpor 99.6 2.2E-13 5.6E-18 83.4 18.7 139 27-169 222-360 (390)
114 KOG3626 consensus 99.6 2.3E-15 5.9E-20 93.3 8.4 292 9-302 95-459 (735)
115 PRK10489 enterobactin exporter 99.6 9E-14 2.3E-18 85.3 16.5 139 30-171 242-380 (416)
116 TIGR00883 2A0106 MFS transport 99.6 1.3E-13 3.2E-18 84.6 17.1 170 2-171 216-401 (413)
117 PRK11663 regulatory protein Uh 99.6 6E-14 1.5E-18 86.2 15.5 130 35-167 268-402 (434)
118 TIGR00895 2A0115 MFS transport 99.6 7.5E-14 1.9E-18 85.7 15.7 169 236-406 18-194 (413)
119 PRK11102 bicyclomycin/multidru 99.6 8.9E-14 2.3E-18 85.4 14.9 126 36-162 220-346 (377)
120 PRK10054 putative MFS-type tra 99.6 3.4E-13 8.8E-18 82.4 17.7 134 38-174 236-369 (395)
121 PRK03699 hypothetical protein; 99.6 5.1E-13 1.3E-17 81.6 18.4 158 10-171 204-362 (394)
122 pfam05631 DUF791 Protein of un 99.6 3.6E-13 9.3E-18 82.3 17.3 117 7-130 33-149 (354)
123 PRK11652 emrD multidrug resist 99.6 9.1E-14 2.3E-18 85.3 13.7 146 251-396 22-170 (394)
124 TIGR00903 2A0129 major facilit 99.6 2.2E-11 5.7E-16 73.3 25.9 308 30-363 10-320 (368)
125 PRK09952 shikimate transporter 99.6 1.3E-12 3.4E-17 79.5 19.1 126 38-163 278-405 (438)
126 PRK10406 alpha-ketoglutarate t 99.6 2.5E-12 6.3E-17 78.1 19.1 136 31-166 263-401 (432)
127 PRK10473 multidrug efflux syst 99.5 1.9E-12 4.9E-17 78.7 17.3 124 36-163 229-352 (392)
128 cd06174 MFS The Major Facilita 99.5 5.5E-12 1.4E-16 76.4 19.1 139 30-171 195-334 (352)
129 pfam11700 ATG22 Vacuole efflux 99.5 6.9E-12 1.8E-16 75.9 18.4 48 362-409 321-370 (477)
130 TIGR00792 gph sugar (Glycoside 99.5 1.8E-10 4.6E-15 68.8 24.0 339 32-386 21-409 (470)
131 PRK11043 inner membrane transp 99.5 4.8E-12 1.2E-16 76.7 15.6 127 34-161 226-354 (401)
132 TIGR00889 2A0110 nucleoside tr 99.4 7.8E-11 2E-15 70.6 19.4 383 12-414 7-421 (435)
133 pfam05977 DUF894 Bacterial pro 99.4 4.5E-11 1.2E-15 71.8 18.0 152 18-175 228-380 (524)
134 PRK10077 xylE D-xylose transpo 99.4 4.5E-11 1.2E-15 71.8 17.6 33 53-85 58-90 (486)
135 TIGR00710 efflux_Bcr_CflA drug 99.4 3E-11 7.5E-16 72.7 16.1 174 247-420 15-194 (400)
136 TIGR00902 2A0127 MFS transport 99.4 1.9E-09 4.9E-14 63.6 24.6 361 16-411 9-377 (388)
137 COG2271 UhpC Sugar phosphate p 99.4 1.5E-12 3.8E-17 79.2 8.1 149 265-413 57-210 (448)
138 PRK11902 ampG muropeptide tran 99.4 1.1E-10 2.9E-15 69.8 17.6 126 39-164 238-365 (402)
139 COG2270 Permeases of the major 99.4 1.5E-11 3.9E-16 74.1 13.1 154 16-173 259-412 (438)
140 COG2814 AraJ Arabinose efflux 99.4 7.6E-11 1.9E-15 70.7 16.1 153 7-164 209-361 (394)
141 PRK11128 putative 3-phenylprop 99.4 2.6E-10 6.5E-15 68.0 18.4 22 332-353 296-317 (383)
142 KOG3762 consensus 99.4 9.4E-11 2.4E-15 70.2 15.4 139 268-406 402-545 (618)
143 PRK09584 tppB putative tripept 99.3 5E-11 1.3E-15 71.6 13.8 91 329-419 387-489 (500)
144 pfam03825 Nuc_H_symport Nucleo 99.3 2.4E-10 6.2E-15 68.1 17.2 151 18-168 214-368 (400)
145 PRK10213 nepI ribonucleoside t 99.3 6.9E-10 1.8E-14 65.8 18.8 140 26-169 232-371 (394)
146 pfam00083 Sugar_tr Sugar (and 99.3 7E-10 1.8E-14 65.8 18.4 15 368-382 398-412 (449)
147 TIGR00893 2A0114 d-galactonate 99.3 1.9E-10 4.9E-15 68.6 14.8 147 263-409 21-185 (427)
148 TIGR00805 oat sodium-independe 99.3 2E-11 5.1E-16 73.6 9.7 160 4-163 26-234 (723)
149 TIGR00711 efflux_EmrB drug res 99.3 3.9E-10 9.9E-15 67.1 16.3 132 32-163 280-415 (501)
150 COG2223 NarK Nitrate/nitrite t 99.3 2.1E-10 5.2E-15 68.5 14.8 153 21-174 229-385 (417)
151 TIGR00900 2A0121 H+ Antiporter 99.3 1.3E-10 3.2E-15 69.6 13.7 137 28-164 242-385 (387)
152 KOG2504 consensus 99.3 1.3E-10 3.4E-15 69.5 13.7 179 5-188 294-474 (509)
153 PRK09705 cynX putative cyanate 99.3 1.3E-09 3.4E-14 64.4 18.7 155 20-178 214-369 (393)
154 TIGR00890 2A0111 Oxalate/Forma 99.3 2.1E-10 5.2E-15 68.5 13.9 158 12-169 243-414 (429)
155 COG0477 ProP Permeases of the 99.3 7.8E-10 2E-14 65.6 16.3 146 18-164 9-158 (338)
156 pfam01306 LacY_symp LacY proto 99.3 8.6E-10 2.2E-14 65.4 16.4 20 46-65 10-29 (413)
157 PRK10207 inner membrane transp 99.3 2.8E-10 7.1E-15 67.8 13.9 58 36-93 129-190 (490)
158 KOG3098 consensus 99.2 3.4E-08 8.7E-13 57.4 24.2 108 51-162 55-162 (461)
159 PRK09528 lacY galactoside perm 99.2 3.9E-09 9.9E-14 62.1 18.6 24 395-418 390-413 (418)
160 TIGR00924 yjdL_sub1_fam amino 99.2 6.8E-09 1.7E-13 60.9 19.3 147 27-175 31-187 (501)
161 PRK11010 ampG muropeptide tran 99.2 3.4E-09 8.6E-14 62.4 17.6 150 23-173 234-386 (490)
162 PRK08633 2-acyl-glycerophospho 99.2 2.9E-09 7.4E-14 62.7 17.1 149 22-173 249-398 (1150)
163 PRK09848 glucuronide transport 99.2 3.8E-09 9.6E-14 62.2 16.7 15 55-69 119-133 (457)
164 TIGR00891 2A0112 MFS transport 99.2 2.7E-11 6.8E-16 72.9 5.3 162 1-164 260-426 (453)
165 KOG0569 consensus 99.2 4.1E-09 1E-13 62.0 16.4 46 42-87 301-346 (485)
166 TIGR00899 2A0120 sugar efflux 99.2 8.9E-09 2.3E-13 60.3 17.4 158 8-169 197-356 (377)
167 TIGR00881 2A0104 phosphoglycer 99.1 2E-09 5.1E-14 63.5 12.9 154 263-416 21-184 (404)
168 TIGR00924 yjdL_sub1_fam amino 99.1 4.8E-09 1.2E-13 61.6 14.4 47 45-91 149-195 (501)
169 pfam01770 Folate_carrier Reduc 99.1 8.4E-08 2.1E-12 55.4 20.3 150 12-167 4-158 (410)
170 COG2211 MelB Na+/melibiose sym 99.1 4E-09 1E-13 62.0 13.3 156 7-165 234-397 (467)
171 PRK09669 putative symporter Ya 99.1 2.4E-08 6.2E-13 58.1 17.2 27 238-264 234-260 (442)
172 pfam06609 TRI12 Fungal trichot 99.1 1.2E-09 3.1E-14 64.6 10.4 52 328-379 409-462 (598)
173 TIGR00892 2A0113 monocarboxyla 99.1 7.4E-09 1.9E-13 60.7 12.9 155 30-187 273-436 (475)
174 pfam06813 Nodulin-like Nodulin 99.0 6.4E-09 1.6E-13 61.0 12.4 134 28-163 19-156 (248)
175 KOG4686 consensus 99.0 5.6E-09 1.4E-13 61.3 12.1 130 35-168 289-418 (459)
176 pfam06779 DUF1228 Protein of u 99.0 1.7E-09 4.3E-14 63.9 9.0 76 23-98 4-79 (85)
177 PRK06814 acylglycerophosphoeth 99.0 3.9E-08 1E-12 57.1 15.5 154 22-175 238-408 (1139)
178 COG3104 PTR2 Dipeptide/tripept 99.0 2.7E-09 7E-14 62.9 7.8 95 325-419 395-497 (498)
179 TIGR00880 2_A_01_02 Multidrug 98.9 6.8E-08 1.7E-12 55.9 14.0 134 276-409 2-145 (148)
180 KOG4332 consensus 98.9 2.6E-09 6.7E-14 62.9 5.5 108 18-129 44-151 (454)
181 PRK11462 putative transporter; 98.9 1.8E-06 4.6E-11 48.7 19.3 15 55-69 119-133 (460)
182 PRK11195 major facilitator fam 98.9 2.8E-07 7.1E-12 52.8 14.9 23 49-71 127-149 (415)
183 pfam02487 CLN3 CLN3 protein. T 98.8 2.2E-06 5.5E-11 48.3 20.9 139 17-164 2-164 (409)
184 TIGR00897 2A0118 polyol permea 98.8 2.9E-08 7.3E-13 57.7 9.3 138 31-170 250-391 (411)
185 TIGR00896 CynX cyanate transpo 98.8 1E-07 2.6E-12 55.0 12.1 139 28-169 230-370 (372)
186 TIGR00879 SP MFS transporter, 98.8 2.9E-07 7.3E-12 52.7 14.1 84 272-355 134-221 (572)
187 KOG3764 consensus 98.8 5.5E-08 1.4E-12 56.3 9.9 151 262-412 96-250 (464)
188 KOG0253 consensus 98.8 2.7E-07 7E-12 52.8 12.9 26 371-396 394-419 (528)
189 pfam06963 FPN1 Ferroportin1 (F 98.8 4.4E-06 1.1E-10 46.8 25.3 348 13-364 4-398 (433)
190 KOG0254 consensus 98.8 4.4E-06 1.1E-10 46.8 18.5 82 278-359 335-430 (513)
191 TIGR00886 2A0108 nitrite trans 98.8 2.6E-07 6.7E-12 52.9 12.0 115 265-379 32-160 (472)
192 KOG3574 consensus 98.8 1.4E-07 3.5E-12 54.4 10.4 148 5-155 25-186 (510)
193 COG2807 CynX Cyanate permease 98.7 2E-06 5E-11 48.5 16.2 147 26-176 223-371 (395)
194 TIGR00792 gph sugar (Glycoside 98.7 7E-07 1.8E-11 50.8 13.9 161 4-167 237-410 (470)
195 TIGR01299 synapt_SV2 synaptic 98.7 1.8E-09 4.6E-14 63.8 -0.2 143 25-170 181-323 (742)
196 KOG0255 consensus 98.7 1.6E-06 4.1E-11 49.0 14.4 30 282-311 128-157 (521)
197 KOG3762 consensus 98.7 1.4E-07 3.5E-12 54.3 8.2 89 7-95 7-96 (618)
198 pfam05978 UNC-93 Ion channel r 98.7 6.8E-07 1.7E-11 50.8 11.6 131 28-162 17-149 (157)
199 KOG2532 consensus 98.6 6.2E-07 1.6E-11 51.1 11.2 51 111-161 133-183 (466)
200 KOG1330 consensus 98.6 8.5E-09 2.2E-13 60.4 0.7 149 262-410 58-210 (493)
201 COG0738 FucP Fucose permease [ 98.6 1.2E-05 2.9E-10 44.7 16.6 16 139-154 145-160 (422)
202 KOG0637 consensus 98.6 2.5E-07 6.3E-12 53.0 7.8 151 11-161 32-202 (498)
203 TIGR00889 2A0110 nucleoside tr 98.5 7.4E-07 1.9E-11 50.7 9.3 159 6-166 212-381 (435)
204 TIGR00898 2A0119 cation transp 98.5 3.2E-05 8.2E-10 42.4 17.5 126 270-396 138-267 (557)
205 KOG2533 consensus 98.5 1.2E-05 3.1E-10 44.6 13.8 118 47-167 78-195 (495)
206 pfam00854 PTR2 POT family. The 98.4 4.7E-05 1.2E-09 41.6 17.4 99 77-175 2-108 (372)
207 KOG1479 consensus 98.4 5.4E-05 1.4E-09 41.3 20.4 122 17-141 20-155 (406)
208 pfam03219 TLC TLC ATP/ADP tran 98.4 5.6E-05 1.4E-09 41.2 25.1 154 6-163 19-205 (491)
209 PRK10133 L-fucose transporter; 98.4 6.3E-05 1.6E-09 41.0 18.8 13 77-89 118-130 (438)
210 KOG2615 consensus 98.4 6.6E-06 1.7E-10 45.9 10.2 41 48-88 66-106 (451)
211 TIGR02718 sider_RhtX_FptX side 98.1 0.00024 6.1E-09 38.1 24.8 365 15-406 5-389 (391)
212 KOG3810 consensus 98.1 0.00012 3.1E-09 39.5 11.4 152 11-168 4-160 (433)
213 pfam00854 PTR2 POT family. The 98.1 0.00012 3.1E-09 39.6 11.4 73 22-94 41-119 (372)
214 TIGR00712 glpT glycerol-3-phos 97.9 1.6E-05 4E-10 44.0 4.6 177 236-412 27-223 (468)
215 KOG2816 consensus 97.9 2.7E-05 6.8E-10 42.9 5.7 12 342-353 386-397 (463)
216 COG3202 ATP/ADP translocase [E 97.9 0.00083 2.1E-08 35.4 23.8 155 6-164 22-210 (509)
217 KOG3098 consensus 97.8 0.0005 1.3E-08 36.5 11.5 38 327-364 356-393 (461)
218 pfam05631 DUF791 Protein of un 97.8 0.0011 2.8E-08 34.8 12.9 36 107-142 72-107 (354)
219 TIGR00926 2A1704 Oligopeptide 97.8 0.00014 3.4E-09 39.3 7.7 136 27-162 20-175 (781)
220 KOG0252 consensus 97.6 0.0007 1.8E-08 35.8 9.0 28 281-308 93-120 (538)
221 PRK03612 spermidine synthase; 97.6 0.0025 6.3E-08 33.0 16.7 157 15-172 18-179 (516)
222 TIGR02332 HpaX 4-hydroxyphenyl 97.5 0.0029 7.4E-08 32.6 14.1 168 3-173 233-404 (412)
223 TIGR00894 2A0114euk Na(+)-depe 97.3 0.005 1.3E-07 31.5 15.4 151 262-412 82-245 (514)
224 TIGR00901 2A0125 AmpG-related 97.3 0.005 1.3E-07 31.5 10.7 138 27-166 4-160 (531)
225 KOG2325 consensus 97.3 0.0039 1E-07 32.0 9.9 56 345-400 409-466 (488)
226 KOG2563 consensus 97.2 0.0034 8.8E-08 32.3 8.9 65 329-393 270-337 (480)
227 TIGR00882 2A0105 oligosacchari 97.1 0.0029 7.4E-08 32.6 7.6 161 252-414 17-188 (397)
228 pfam03092 BT1 BT1 family. Memb 97.1 0.0094 2.4E-07 30.1 14.6 44 43-86 121-164 (425)
229 pfam03137 OATP Organic Anion T 97.0 0.012 3.1E-07 29.5 9.8 38 348-385 518-558 (582)
230 TIGR00901 2A0125 AmpG-related 96.5 0.029 7.4E-07 27.6 12.8 60 14-74 97-160 (531)
231 TIGR00788 fbt folate/biopterin 96.3 0.038 9.8E-07 27.0 13.1 168 13-181 33-210 (594)
232 pfam06813 Nodulin-like Nodulin 96.3 0.04 1E-06 26.9 10.4 116 265-381 30-154 (248)
233 TIGR00788 fbt folate/biopterin 96.1 0.051 1.3E-06 26.4 10.4 56 34-89 154-210 (594)
234 KOG3880 consensus 95.9 0.061 1.6E-06 26.0 8.8 140 16-163 13-171 (409)
235 KOG1237 consensus 95.9 0.065 1.7E-06 25.9 27.2 154 28-182 55-237 (571)
236 pfam02487 CLN3 CLN3 protein. T 95.9 0.03 7.6E-07 27.6 6.2 33 328-360 346-378 (409)
237 pfam01733 Nucleoside_tran Nucl 95.8 0.071 1.8E-06 25.7 16.5 99 278-376 184-298 (305)
238 KOG3097 consensus 95.7 0.078 2E-06 25.5 11.2 79 54-136 66-144 (390)
239 TIGR00926 2A1704 Oligopeptide 95.6 0.066 1.7E-06 25.9 7.1 79 326-404 113-205 (781)
240 KOG4830 consensus 88.6 0.41 1.1E-05 21.8 2.9 48 32-79 38-94 (412)
241 pfam07672 MFS_Mycoplasma Mycop 76.1 3.6 9.2E-05 17.1 7.9 22 224-245 82-103 (265)
242 COG1230 CzcD Co/Zn/Cd efflux s 72.7 4.4 0.00011 16.7 10.7 78 5-89 20-100 (296)
243 PRK10580 proY putative proline 60.6 8.1 0.00021 15.4 11.5 23 2-24 4-26 (457)
244 COG2119 Predicted membrane pro 54.5 10 0.00026 14.8 7.7 34 282-315 144-177 (190)
245 TIGR00769 AAA ADP/ATP carrier 52.9 11 0.00028 14.7 15.9 146 12-163 8-190 (491)
246 KOG2601 consensus 50.7 12 0.00031 14.5 13.0 160 11-170 27-207 (503)
247 TIGR00939 2a57 Nucleoside Tran 49.3 13 0.00033 14.4 9.6 103 276-378 373-496 (503)
248 PRK02237 hypothetical protein; 46.0 14 0.00037 14.1 3.5 49 44-92 53-101 (108)
249 TIGR02838 spore_V_AC stage V s 46.0 14 0.00037 14.1 5.8 55 20-76 24-79 (141)
250 pfam02694 UPF0060 Uncharacteri 44.6 15 0.00039 14.0 4.0 47 46-92 54-100 (107)
251 TIGR02123 TRAP_fused TRAP tran 43.5 16 0.00041 13.9 8.3 143 7-160 121-279 (681)
252 COG4262 Predicted spermidine s 42.4 17 0.00042 13.8 14.3 152 10-164 7-165 (508)
253 PRK11598 putative cell divisio 40.4 18 0.00046 13.6 10.1 60 31-90 29-89 (545)
254 pfam09930 DUF2162 Predicted tr 37.7 20 0.00051 13.4 5.9 15 267-281 126-140 (228)
255 TIGR00806 rfc reduced folate c 35.3 22 0.00056 13.2 28.0 154 9-168 23-180 (542)
256 PRK03818 hypothetical protein; 35.2 22 0.00056 13.2 8.4 50 31-81 40-97 (552)
257 PRK10238 aromatic amino acid t 34.2 23 0.00058 13.1 10.7 34 385-419 423-456 (456)
258 PTZ00042 stevor; Provisional 33.3 24 0.00061 13.0 8.3 31 386-416 264-295 (304)
259 PRK11099 putative inner membra 32.2 25 0.00063 12.9 14.5 31 381-411 354-384 (398)
260 pfam00606 Glycoprotein_B Herpe 31.6 25 0.00065 12.9 4.7 30 366-395 643-672 (711)
261 COG2233 UraA Xanthine/uracil p 22.9 38 0.00096 12.0 7.5 111 19-133 26-136 (451)
262 pfam06645 SPC12 Microsomal sig 21.5 40 0.001 11.9 6.0 42 371-414 20-63 (76)
263 TIGR01477 RIFIN variant surfac 20.9 42 0.0011 11.8 2.5 25 395-419 363-387 (395)
No 1
>PRK10133 L-fucose transporter; Provisional
Probab=100.00 E-value=0 Score=315.11 Aligned_cols=409 Identities=30% Similarity=0.517 Sum_probs=329.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
Q ss_conf 31120059999999999999999873899899999980999899999999999999999999999998526289999999
Q gi|254780843|r 4 TIARNIQCTKIYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGL 83 (420)
Q Consensus 4 ~~~k~~~~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~ 83 (420)
.-+|+....++++..+||++||.++++++++|++|+.|++|++|.++++.+|+++|.+.++|+|.+.||+|.|+.++.|+
T Consensus 19 ~~~k~~~~p~~lv~~LFF~wGf~t~l~~~Li~~fk~~f~Ls~~qa~lv~~aff~aY~v~siPag~li~r~GyK~~ii~GL 98 (438)
T PRK10133 19 GQSRSYIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGL 98 (438)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 44510388999999999999999876778999999990968999989999999999999988999999975399999999
Q ss_pred HHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 97643210000001320246789998877756788876531000012303578877664431100003454788888641
Q gi|254780843|r 84 LIMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLML 163 (420)
Q Consensus 84 ~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 163 (420)
.++++|++++..++...+|+.++...++.|.|.+..+.+.++++....|+++...++++.+..+.+|.+++|.+++.++.
T Consensus 99 ~l~a~G~llF~paa~~~sy~~fL~alFvig~Gla~LQtaaNPyi~~lG~~e~a~~RLnlaq~fN~lGt~i~pll~~~li~ 178 (438)
T PRK10133 99 FLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLIL 178 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999998872699999999999971999998088999997895239999999999787899999999999995
Q ss_pred CCCCCHHHHHHH----HHHHHHHHHHHHHHCCCCCCCHHHHH------HHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCC
Q ss_conf 234204677655----55577898886420011211001345------55543210123101233210001111222111
Q gi|254780843|r 164 GNLASPNTSMLA----DTMKDYQTDTARVISQMYLVLAIILF------LATWLCWMQRNSFADHKRNHISFLKTLDILAN 233 (420)
Q Consensus 164 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (420)
............ .............+..++........ .....++.+ ++++++++.........+..++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~pYl~ia~~~~~lal~~~~~~lP~i~-~~~~~~~~~~~~~~~~~~l~~~ 257 (438)
T PRK10133 179 SNVPHQSQDVLDKMSPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQ-SDNHSDAKQGSFSASLSRLARI 257 (438)
T ss_pred CCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCCCCCCCCCCCHHHHHHHHHC
T ss_conf 577510167786348988988877789999999999999999999999993499888-7642100023302447887404
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHH
Q ss_conf 11110001110001355677899998754201222101246888999987643100111111000000000124555545
Q gi|254780843|r 234 PRFTMGAVCIFLYVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTAC 313 (420)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (420)
+.........+++.+.+.....+...|..++ ..+.+........+..+.....+|..+..+.+|+.+++++........
T Consensus 258 ~~~~lgv~aiF~YVGaEV~i~s~~i~y~~~~-~~g~~~~~a~~~~s~~~~~~~vGRfig~~ll~~~~~~~~L~~~a~~~i 336 (438)
T PRK10133 258 RHWRWAVLAQFCYVGAQTACWSYLIRYAVEE-IPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAM 336 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 2999999999999999999999999999872-489867789999999999999999999999825789999999999999
Q ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Q ss_conf 6768996223368999999999999999999999999630156569999999999999999999999999612-379999
Q gi|254780843|r 314 SLVILSSYTTGFISGWSLIAVGLFNSIMFPTIFSLASASLEDQASGGSGIICTTISGGVIIPLGVGYLVDIAS-LRDAMF 392 (420)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~p~i~G~l~d~~g-~~~~~~ 392 (420)
+..+.....+.....+.+.+++++++.+||+++++..+..+++++.++++.+++.+||++.|++.|++.|..| .+.+|+
T Consensus 337 il~l~a~~~~g~~~~~al~lvg~f~Sim~PtIFsLal~gLG~~t~~~S~iLvm~IvGGAilP~l~G~laD~~G~~~~a~~ 416 (438)
T PRK10133 337 ALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSSFIVMTIIGGGIVTPVMGFVSDAAGNIPTAEL 416 (438)
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
T ss_conf 99999998288699999999999988889999999967342112127999999997328899999999985287179999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 9999999999999985311102
Q gi|254780843|r 393 VPAVCYIIIAIYGIYCCYKENN 414 (420)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~ 414 (420)
++.+|++++.+|+.|+.|+.+|
T Consensus 417 vp~~cf~~i~~ya~~~~~~~~~ 438 (438)
T PRK10133 417 IPALCFAVIFIFARFRSQTATN 438 (438)
T ss_pred HHHHHHHHHHHHHHHCCCCCCC
T ss_conf 9999999999999982553779
No 2
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=0 Score=299.82 Aligned_cols=406 Identities=36% Similarity=0.632 Sum_probs=342.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
Q ss_conf 75311200599999999999999998738998999999809998999999999999999999999999985262899999
Q gi|254780843|r 2 KDTIARNIQCTKIYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICT 81 (420)
Q Consensus 2 ~~~~~k~~~~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~ 81 (420)
..+.+|+.+..++++..+||++|+.+.++++++|++++.|++|..|+++++.+++.+|.++++|.|++.+|+|+|+.++.
T Consensus 4 ~~~~~~~~~~~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~l 83 (422)
T COG0738 4 DASSSKSVKLAFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVL 83 (422)
T ss_pred CCCCCCCCEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf 21146782018999999999999996221140799999938659999999999999899986149999988424889999
Q ss_pred HHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf 99976432100000013202467899988777567888765310000123035788776644311000034547888886
Q gi|254780843|r 82 GLLIMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVL 161 (420)
Q Consensus 82 ~~~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 161 (420)
|+.++++|+.++..++...+|..++...++.+.|.+....+.++++....++++..+.++..+..+++|.+.+|.+++.+
T Consensus 84 gL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~l 163 (422)
T COG0738 84 GLLLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSL 163 (422)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999866665112999999999998406888851441698727715688998999986416989999999999
Q ss_pred HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCC---CCCCCCCCCCCCC
Q ss_conf 4123420467765555577898886420011211001345555432101231012332100011---1122211111110
Q gi|254780843|r 162 MLGNLASPNTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFL---KTLDILANPRFTM 238 (420)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 238 (420)
+.++ +...........+.......+..++.................+.++.++.+++.... ...+..+++..+.
T Consensus 164 ils~---~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 240 (422)
T COG0738 164 ILSG---VALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSLGASGSAGLSSLFQNKHLRL 240 (422)
T ss_pred HHHH---HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHH
T ss_conf 9732---2510488899999999887565089999999999999998435976785651125656413889975748999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 00111000135567789999875420122210124688899998764310011111100000000012455554567689
Q gi|254780843|r 239 GAVCIFLYVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVIL 318 (420)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (420)
.....+++.+.+.....+++.|..+. .+.+..+.....+.++.+.+.+|..+....+|+.+.+.....+......+..
T Consensus 241 gvl~~FlYVG~Eva~gsfl~~y~~~~--~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~ 318 (422)
T COG0738 241 GVLAIFLYVGAEVAIGSFLVSYLEEL--LGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLA 318 (422)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_conf 99999999849999999999999865--9963899999999999999999999999999718889999999999999999
Q ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Q ss_conf 96223368999999999999999999999999630156569999999999999999999999999612379999-99999
Q gi|254780843|r 319 SSYTTGFISGWSLIAVGLFNSIMFPTIFSLASASLEDQASGGSGIICTTISGGVIIPLGVGYLVDIASLRDAMF-VPAVC 397 (420)
Q Consensus 319 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~p~i~G~l~d~~g~~~~~~-~~~~~ 397 (420)
....++.+..+...++|++++.+||++++.+.+..|++++.+++...++.+||++.|++.|++.|+.|....+. ++..|
T Consensus 319 ~~l~~g~v~~~~l~~ig~F~simfPTIfslal~~l~~~ts~~s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~~~pllc 398 (422)
T COG0738 319 VALIGGVVALYALFLIGLFNSIMFPTIFSLALKNLGEHTSVGSGLLVMAIVGGAIIPPLQGVIADMFGIQLTFLIVPLLC 398 (422)
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99964749999999999986777889999998314765565411333110230388899999997540588878888999
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999999853111
Q gi|254780843|r 398 YIIIAIYGIYCCYKE 412 (420)
Q Consensus 398 ~~~~~~~~~~~~~~~ 412 (420)
++.+++++++..+-|
T Consensus 399 ~lyV~~~~~~~~~~k 413 (422)
T COG0738 399 YLYVLFFALIGKKSK 413 (422)
T ss_pred HHHHHHHHHHHCCCC
T ss_conf 999999999831355
No 3
>PRK03699 hypothetical protein; Provisional
Probab=100.00 E-value=0 Score=283.33 Aligned_cols=374 Identities=17% Similarity=0.198 Sum_probs=298.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
Q ss_conf 12005999999999999999987389989999998099989999999999999999999999999852628999999997
Q gi|254780843|r 6 ARNIQCTKIYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLI 85 (420)
Q Consensus 6 ~k~~~~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~ 85 (420)
+||++....+.+..||+.|......|+++|+++||||+|.+|.|.+.+...+|+.+++++.|++.||+||||++..+..+
T Consensus 2 ~~~~~~l~~~~fl~ff~~G~~~~~~G~~iP~i~~~f~ls~~~~g~i~s~~~iG~li~~~~~g~L~~k~G~k~~l~~g~~l 81 (394)
T PRK03699 2 NSNKIKLTWISFLSYALTAALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLRFGFIL 81 (394)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_conf 95246999999999999998998699858999999495999999999999999999999999999995950999999999
Q ss_pred HHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
Q ss_conf 64321000000132024678999887775678887653100001230357887766443110000345478888864123
Q gi|254780843|r 86 MSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGN 165 (420)
Q Consensus 86 ~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 165 (420)
..++.+++.++ ++++.+.+.+++.|.+.+......++.+.+..++++|+..+...+..+++|..++|.+.+.+....
T Consensus 82 ~~i~~l~~~~~---~s~~~l~v~~fl~Glg~G~~~~~~~~~i~~~~~~~~r~~~l~~~~~~f~vGa~i~Pli~~~ll~~~ 158 (394)
T PRK03699 82 MVLAVAGLMFS---HSLALFSIAMFVLGLVSGITMSIGTFLITHVYEGRQRGSRLLFTDSFFSMAGMIFPIIAAYLLARS 158 (394)
T ss_pred HHHHHHHHHHC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999981---529999999999986789999889999999706007889999999999889999999999998569
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 42046776555557789888642001121100134555543210123101233210001111222111111100011100
Q gi|254780843|r 166 LASPNTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFL 245 (420)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (420)
..|+..+.................. .+..++++++ +++ +..+...++..+......++
T Consensus 159 ~~W~~~y~~~~~~~~~~~~~~~~~~---------------~p~~~~~~~~--~~~-----~~~~~~~~~~~~~~~i~~f~ 216 (394)
T PRK03699 159 IEWYWVYLCIGLVAVAIFILTLFSE---------------FPALGKHAPK--TEA-----PVVKSKWNFGVIFLAIAALL 216 (394)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHCC---------------CCCCCCCCCC--CCC-----CHHHHHCCHHHHHHHHHHHH
T ss_conf 9889999999999999999999825---------------8732224553--323-----20343026089999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCH-
Q ss_conf 0135567789999875420122210124688899998764310011111100000000012455554567689962233-
Q gi|254780843|r 246 YVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYTTG- 324 (420)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 324 (420)
+.+.+.....|.+.|..+. .+.+....+...+.++.....+|...+++.||+++++...................++
T Consensus 217 yv~~e~~~~~W~ptyl~~~--~g~~~~~A~~~~S~fw~~~~iGrl~~~~l~~r~~~~~~l~~~~~~a~~~~~~~~~~~~~ 294 (394)
T PRK03699 217 YILAQLTFISWVPEYAQKK--FGMSLEDAGNLVSNFWMAYMVGMWIFSFILRFFDLQRILTVLAGLALVLMYLFVTTDNP 294 (394)
T ss_pred HHHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf 9999999999999999982--79998899999999999999999999999988437999999999999999999975868
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 68999999999999999999999999630156569-99999999999999999999999961237999999999999999
Q gi|254780843|r 325 FISGWSLIAVGLFNSIMFPTIFSLASASLEDQASG-GSGIICTTISGGVIIPLGVGYLVDIASLRDAMFVPAVCYIIIAI 403 (420)
Q Consensus 325 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~i~p~i~G~l~d~~g~~~~~~~~~~~~~~~~~ 403 (420)
....+.....|++++.++|+..+...+..|++... .+.....+.+|+++.|.+.|.+.|+.|.+.++.+..+++.++.+
T Consensus 295 ~~~~~~~~~~Gff~a~iyp~~~s~~~~~~~~~~~~~vs~il~~g~~G~~~~P~i~G~i~~~~G~~~~~~~~~~~y~~~~~ 374 (394)
T PRK03699 295 AHMAYLILGLGFFSSAIYTTIITLGSQQTKVASPKLVNFILTCGTIGTMLSFVVTGPIVAHFGLQAAMLTANGLYAVVFV 374 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999778899999998755553187999999999899999999999999986289999999999999999
Q ss_pred HHH
Q ss_conf 999
Q gi|254780843|r 404 YGI 406 (420)
Q Consensus 404 ~~~ 406 (420)
..+
T Consensus 375 ~~~ 377 (394)
T PRK03699 375 MCI 377 (394)
T ss_pred HHH
T ss_conf 999
No 4
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=0 Score=275.12 Aligned_cols=395 Identities=12% Similarity=0.069 Sum_probs=269.1
Q ss_pred CCCCHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
Q ss_conf 975311200599999999999---99999873899899999980999899999999999999999999999998526289
Q gi|254780843|r 1 MKDTIARNIQCTKIYIFILFF---LFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIK 77 (420)
Q Consensus 1 m~~~~~k~~~~~~i~i~~~ff---~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~ 77 (420)
||.+ +|..++..+.+.+||+ +.++|...++.++|.+++|||+|++|.|++.|+++++|.++++++|+++||+|||+
T Consensus 3 ~~~~-~~~~~~~~~v~~l~~~~~~~d~~D~~~~g~~~p~i~~e~~ls~~~~G~l~s~~~~g~~ig~~~~G~LaDr~Grr~ 81 (406)
T PRK11551 3 MRTS-SSSSSRLALTIGLCFAVALLEGLDLQSAGVAAPRMAREFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKR 81 (406)
T ss_pred CCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
T ss_conf 7879-987230999999999999999999999999999999985939989999999999999999999999999976299
Q ss_pred HHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHH
Q ss_conf 99999997643210000001320246789998877756788876531000012303578877664431100003454788
Q gi|254780843|r 78 GICTGLLIMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYI 157 (420)
Q Consensus 78 ~l~~~~~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 157 (420)
++..+++++++++++++++ ++++.+.+.|++.|++.+...+...+++.|++|+++|++.++..+.+..+|..+++.+
T Consensus 82 vl~~~~~~~~i~~~l~a~a---~s~~~l~~~R~l~Gig~g~~~p~~~~~i~e~~p~~~Rg~a~~~~~~g~~~G~~~~~~l 158 (406)
T PRK11551 82 VLIVSVALFGLFSLATAQA---WDFPSLLVARLLTGLGLGGALPNLIALTSEAAGPRLRGTAVSLMYCGVPFGGALASVI 158 (406)
T ss_pred HHHHHHHHHHHHHHHHHCC---CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHH
T ss_conf 9999999999999999715---8899999999999723410011779887874789997667603234443068999999
Q ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 88864123420467765555577898886420011211001345555432101231012332100011112221111111
Q gi|254780843|r 158 GSVLMLGNLASPNTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFT 237 (420)
Q Consensus 158 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (420)
...+.....|.. .................... + +..... ..++++++++...+......+.+...
T Consensus 159 ~~~l~~~~gWR~-~f~i~gi~~~i~~~~~~~~l-~-----------es~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~ 223 (406)
T PRK11551 159 GVLAAGDAEWRH-IFYVGGVGPLLLVPLLMRWL-P-----------ESRAFL--QAAGVGAAQAGVLRALFGEGRATATL 223 (406)
T ss_pred HHHHHHCCCHHH-HHHHHHHHHHHHHHHHHHHC-C-----------CCCHHH--HHCCCCCCCCCHHHHHHCCCHHHHHH
T ss_conf 999960125999-99999999999999999987-8-----------980046--64653322123588986122799999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHH
Q ss_conf 00011100013556778999987542012221012468889999876431001111110000000001245555456768
Q gi|254780843|r 238 MGAVCIFLYVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVI 317 (420)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (420)
......++.....+....|.+.+... .+.+..+.+............+....++..||.++++..............
T Consensus 224 ~l~~~~~~~~~~~~~~~~wlP~~l~~---~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~l~ 300 (406)
T PRK11551 224 LLWISYFFTLIVLYFLLNWLPSLLIA---QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPSRVVLGMYAGILASLA 300 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999998---599888999999999999999999999999883639999999999999999
Q ss_pred HHHHCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Q ss_conf 9962233-689999999999999999999999996301565-699999-9999999999999999999961237-99999
Q gi|254780843|r 318 LSSYTTG-FISGWSLIAVGLFNSIMFPTIFSLASASLEDQA-SGGSGI-ICTTISGGVIIPLGVGYLVDIASLR-DAMFV 393 (420)
Q Consensus 318 ~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~g~~i~p~i~G~l~d~~g~~-~~~~~ 393 (420)
....... ..........+++....++..+....|..|.+. +.+.+. ...+.+|+.++|.+.|++.|.+|.. ..+..
T Consensus 301 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~rgt~~G~~~~~g~lG~~igP~~~G~ll~~~g~~~~~~~~ 380 (406)
T PRK11551 301 ALAAAPGFAGMALAGFAAGLFVVGGQSVLYALAPLFYPTQMRGTGVGAAVAVGRLGSMAGPLAAGQLLALGRSTAGVIGA 380 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 99998779999999999999999999999999998785989999999999999999999999999999811889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 999999999999985311102012
Q gi|254780843|r 394 PAVCYIIIAIYGIYCCYKENNFEQ 417 (420)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~ 417 (420)
.+.++++.++..++..+|++|.|.
T Consensus 381 ~~~~~~~~~~~~l~l~~~~~r~~p 404 (406)
T PRK11551 381 SIPVILVAALAALLLVSRPSRADP 404 (406)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 999999999999998499765799
No 5
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=0 Score=275.94 Aligned_cols=403 Identities=13% Similarity=0.066 Sum_probs=270.9
Q ss_pred CCCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
Q ss_conf 7531120059999999999----999999873899899999980999899999999999999999999999998526289
Q gi|254780843|r 2 KDTIARNIQCTKIYIFILF----FLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIK 77 (420)
Q Consensus 2 ~~~~~k~~~~~~i~i~~~f----f~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~ 77 (420)
||+..|+.|+-+..++.+. +..-+++..++.+.|.+++|+|+|++|.|++.|+|+++|+++++|+|+++||+|+|+
T Consensus 10 ~~~~~~~yr~~r~~i~~~~fl~Y~~~y~~R~~~s~~~p~i~~e~glt~~q~G~i~s~f~~~Yal~q~~~G~L~Dr~g~r~ 89 (434)
T PRK11663 10 KHEIDARYRYWRRHIMITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNPRY 89 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
T ss_conf 89999999999999999999999999986057998699999884979989999999999999999976799998706449
Q ss_pred HHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHH
Q ss_conf 99999997643210000001320246789998877756788876531000012303578877664431100003454788
Q gi|254780843|r 78 GICTGLLIMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYI 157 (420)
Q Consensus 78 ~l~~~~~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 157 (420)
++.++++++++.+++++++ ++++.+.+.|++.|++++...|+....+.+|+|+++|+++.++.+...++|..+++.+
T Consensus 90 ~l~~~~~~~~~~~~~~g~~---~~~~~~~~~r~l~G~~~~~~~p~~~~~i~~Wfp~~eRg~a~gi~~~~~~vG~~l~~~l 166 (434)
T PRK11663 90 FMGIGLIATGIINILFGFS---SSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLV 166 (434)
T ss_pred HHHHHHHHHHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999974---3289999999999998560168999999998488889999999999987778888999
Q ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHH-HH--CCCCCCCCCCCCC
Q ss_conf 88864123420467765555577898886420011211001345555432101231012332-10--0011112221111
Q gi|254780843|r 158 GSVLMLGNLASPNTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKR-NH--ISFLKTLDILANP 234 (420)
Q Consensus 158 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~ 234 (420)
.+.+....+|. ..+.............+...... .+.........+.+.++.+..++++ .. ......+...+++
T Consensus 167 ~~~i~~~~gWr-~~F~~~g~~~~v~~~~~~~~~~d--~P~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (434)
T PRK11663 167 VGAIALHYGWR-YGMIIAGIIAIVVGLFLCWRLRD--RPQAMGLPSVGEWRHDALELAQEQEGAGLSRKEILTKYVLLNP 243 (434)
T ss_pred HHHHHHHCCCH-HHHHHHHHHHHHHHHHHHHHCCC--CHHHCCCCCHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHCCH
T ss_conf 99999980629-99999999999999999983268--8766499971121023455543302457758999999996488
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH--CCCHHHHHHHHH
Q ss_conf 111000111000135567789999875420122210124688899998764310011111100000--000012455554
Q gi|254780843|r 235 RFTMGAVCIFLYVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFS--AEKTLCAFATTA 312 (420)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 312 (420)
..|......++..........|.+.|..+.. +.+..+.+...+....+...+....++.+||.. ++..........
T Consensus 244 ~~w~~~~~~~~~~~~~~~~~~WlP~yL~~~~--g~s~~~a~~~~~l~~ig~~iG~l~~G~lSDrl~~~~r~~~~~~~~~~ 321 (434)
T PRK11663 244 YIWLLSFSYVLVYVVRAAINDWGNLYLSETL--GYDLVTANSAVSMFELGGFIGSLVAGWGSDKLFNGNRGPMNLIFAAG 321 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
T ss_conf 9999999999999999999832658888760--88899999999999999999999888999987347731899999999
Q ss_pred H-HHH-HHHH--HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 5-676-8996--223368999999999999999999999999630156-56999999-9999999999999999999612
Q gi|254780843|r 313 C-SLV-ILSS--YTTGFISGWSLIAVGLFNSIMFPTIFSLASASLEDQ-ASGGSGII-CTTISGGVIIPLGVGYLVDIAS 386 (420)
Q Consensus 313 ~-~~~-~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~g~~i~p~i~G~l~d~~g 386 (420)
. ... .+.. ..+.......+..+|++.............|..|++ .++++++. ..+.+|++++|.+.|.+.|.+|
T Consensus 322 ~~~~~~~l~~~~~~~~~~~~~~l~~~G~~~~g~~~l~~~~~~~~~~~~~~gta~G~~n~~g~lG~~l~~~~~G~i~~~~g 401 (434)
T PRK11663 322 IFLSVGSLWLMPFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALAGYPLAKVLETWH 401 (434)
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999983631299999999999999998999999999983682102379899889999999999999999997038
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 37999999999999999999853111
Q gi|254780843|r 387 LRDAMFVPAVCYIIIAIYGIYCCYKE 412 (420)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (420)
+...|....++..+.++..+...+.+
T Consensus 402 w~~~f~~l~~~a~v~~~illp~~~~~ 427 (434)
T PRK11663 402 WTGFFVVISIAAGISALLLLPFLNAQ 427 (434)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 58999999999999999999981767
No 6
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=0 Score=270.53 Aligned_cols=411 Identities=12% Similarity=0.009 Sum_probs=267.3
Q ss_pred CHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
Q ss_conf 311200599999999----9999999987389989999998099989999999999999999999999999852628999
Q gi|254780843|r 4 TIARNIQCTKIYIFI----LFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGI 79 (420)
Q Consensus 4 ~~~k~~~~~~i~i~~----~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l 79 (420)
++.|..|+.+..++. .+++.-+++..++.+.|.++|| |+|++|.|++.|+|+++|+++++|.|+++||+|+|+++
T Consensus 18 ~~~~~~~r~Rw~i~~~lfi~y~~~Y~dR~~~sva~p~i~e~-gls~~q~G~i~S~F~~~Yal~q~~~G~l~Dr~g~r~~l 96 (452)
T PRK11273 18 EIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFL 96 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
T ss_conf 88578787999999999999999998115899878999882-99988999999999999999986127778605742999
Q ss_pred HHHHHHHHHHHHCCHHCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf 9999976432100000013-202467899988777567888765310000123035788776644311000034547888
Q gi|254780843|r 80 CTGLLIMSLGCILFTATIE-ITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIG 158 (420)
Q Consensus 80 ~~~~~~~~i~~ll~~~a~~-~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 158 (420)
..+++++++.+++++++.. ..++..+.+.|++.|++++...|+....+.+|+|+++|++..++.+...++|..+.+.+.
T Consensus 97 ~~gl~~~s~~~~l~G~~~~~~~s~~~~~~lr~l~G~~eg~~~p~~~k~i~~WFp~~eRg~a~gi~~~~~~vG~~l~~~l~ 176 (452)
T PRK11273 97 PAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLF 176 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999878879999999999988652010189999999977998999999999998678999999999
Q ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH-CCCCCCHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 88641234204677655555778988864200112110013455554321-01231012332100011112221111111
Q gi|254780843|r 159 SVLMLGNLASPNTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCW-MQRNSFADHKRNHISFLKTLDILANPRFT 237 (420)
Q Consensus 159 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (420)
........+|+................+................++.+.+ .++.+++++++........+...+++..|
T Consensus 177 ~~~~~~~~gWr~~F~i~g~~~l~~~v~~~~~~~d~P~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~w 256 (452)
T PRK11273 177 LLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKHEQELTAKQIFMQYVLPNKLLW 256 (452)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHH
T ss_conf 99999974699999999999999999999982378210599966777420111133211122325678899980460899
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH--CCCHH-HHHHHHHHH
Q ss_conf 000111000135567789999875420122210124688899998764310011111100000--00001-245555456
Q gi|254780843|r 238 MGAVCIFLYVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFS--AEKTL-CAFATTACS 314 (420)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~ 314 (420)
......++.....+....|.|.|..+.. +.+....+........+...+....++.+||.. ++... .........
T Consensus 257 ~l~l~~~~~~~~~yg~~~WlP~YL~~~~--g~s~~~~~~~~~l~~~~g~~G~l~~G~lSDrl~~~rr~~~~~~~~~~~~~ 334 (452)
T PRK11273 257 YIAIANVFVYLLRYGILDWSPTYLKEVK--HFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTI 334 (452)
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 9999999999999997153899998624--88888887999999999999899899999998736733999999999999
Q ss_pred HHHHH---HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH-HHHHHHHHH-HHHHHHHHHHHHHHH
Q ss_conf 76899---6223368999999999999999999999999630156-56999999-999999999-999999999961237
Q gi|254780843|r 315 LVILS---SYTTGFISGWSLIAVGLFNSIMFPTIFSLASASLEDQ-ASGGSGII-CTTISGGVI-IPLGVGYLVDIASLR 388 (420)
Q Consensus 315 ~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~g~~i-~p~i~G~l~d~~g~~ 388 (420)
..... ...+.......+..+|++.............|..|++ .+.++++. ..+++|+++ .|.+.|++.|++|+.
T Consensus 335 ~~~~~~~~~~~~~~~~~~~l~~~Gf~~~g~~~l~~~~a~d~~p~~~~Gt~~G~~n~~g~lgGai~~~~~~G~l~d~~Gw~ 414 (452)
T PRK11273 335 ATIVYWMNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWD 414 (452)
T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
T ss_conf 99999970456699999999999999999999999999985677367899999878999899999898999967754778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99999999999999999985311102012
Q gi|254780843|r 389 DAMFVPAVCYIIIAIYGIYCCYKENNFEQ 417 (420)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (420)
..|.+...+.++..++.+....++||..|
T Consensus 415 ~~F~~l~~~~~~a~i~l~~~~~~e~r~~~ 443 (452)
T PRK11273 415 GGFMVMIGGSILAVILLIVVMIGEKRHHE 443 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999977765158
No 7
>PRK03545 sugar efflux transporter; Provisional
Probab=100.00 E-value=0 Score=254.56 Aligned_cols=386 Identities=13% Similarity=0.060 Sum_probs=286.6
Q ss_pred CHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
Q ss_conf 311200599999999-9999999987389989999998099989999999999999999999999999852628999999
Q gi|254780843|r 4 TIARNIQCTKIYIFI-LFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTG 82 (420)
Q Consensus 4 ~~~k~~~~~~i~i~~-~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~ 82 (420)
|++||..|..++... .-|..+.+..+..+++|++++|||.|.+|+|++.++|.+++++++++.|.++||+|||++++.+
T Consensus 1 ~~~~~~~w~~v~~L~~~~F~~~~~e~~~~glLp~ia~dl~vs~~~aG~lvt~yal~~ai~~p~~~~l~dr~~Rr~~ll~~ 80 (390)
T PRK03545 1 TVSRKVAWLRVVALALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPFMLLTSQVERRKLLLGL 80 (390)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 98654557999999999999998899899717999978299999999999999999999999999997016849999999
Q ss_pred HHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 99764321000000132024678999887775678887653100001230357887766443110000345478888864
Q gi|254780843|r 83 LLIMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLM 162 (420)
Q Consensus 83 ~~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 162 (420)
+.+++++++++.++ +||+.+...|.+.|++.+...+...++..|..|+++|+++++....+..++...|+.+++.+.
T Consensus 81 l~~f~~~~~l~a~a---~s~~~Ll~~R~l~Gi~~a~~~~~a~a~~~~l~p~~~rg~a~g~v~~G~slg~vlG~plg~~l~ 157 (390)
T PRK03545 81 FVLFIASHVLSGLA---WSFTVLLISRIGIAFAHAVFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVVG 157 (390)
T ss_pred HHHHHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999997---639999999999861038888889999999778555778999999999999999764489998
Q ss_pred HCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 12342046776555557789888642001121100134555543210123101233210001111222111111100011
Q gi|254780843|r 163 LGNLASPNTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVC 242 (420)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (420)
+...|...+..............+.... +.++++ +...++.....+++..+.....
T Consensus 158 ~~~gWr~~F~~~~vl~~~~~l~~~~~lP-----------------~~~~~~-------~~~~~~~~~~l~~~~ll~~~~~ 213 (390)
T PRK03545 158 QALGWRTTFLAIGGVALITLLLLIKLLP-----------------LLPSEN-------SGSLKSLPLLFRRPALVSLYLL 213 (390)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHCC-----------------CCCCCC-------CCCHHHHHHHHCCHHHHHHHHH
T ss_conf 8628089999999999999999999778-----------------887767-------7666679999728899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 10001355677899998754201222101246888999987643100111111000000000124555545676899622
Q gi|254780843|r 243 IFLYVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYT 322 (420)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (420)
.............+...+..+. .+.+....+.....+......+....++..||.+++...............+....
T Consensus 214 ~~l~~~~~f~~~~yi~p~l~~~--~g~s~~~~~~~l~~~Gia~~~g~~~~grl~dr~~~~~~~~~~~ll~~~~~~l~~~~ 291 (390)
T PRK03545 214 TVVVVTAHFTAYSYIEPFVQNV--AGLSANFATALLLLFGGAGIIGSVLFSRLGNRHPSGFLLIAIALLLVCLLLLLPAA 291 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999870--59988899999999999999999999999884210199999999999999999988
Q ss_pred CHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 336-8999999999999999999999999630156569999999-99999999999999999961237999999999999
Q gi|254780843|r 323 TGF-ISGWSLIAVGLFNSIMFPTIFSLASASLEDQASGGSGIIC-TTISGGVIIPLGVGYLVDIASLRDAMFVPAVCYII 400 (420)
Q Consensus 323 ~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~i~p~i~G~l~d~~g~~~~~~~~~~~~~~ 400 (420)
+.. .......+.|++.....|...+...+..|++++.+.+.+. ..++|.++||.+.|.+.|+.|+...+++.+++.+.
T Consensus 292 ~~~~~~~~~~~l~g~~~~~~~~~~q~~~~~~ap~~~~~a~al~~s~~~lG~~lG~~lgG~~~~~~G~~~~~~~ga~~~~~ 371 (390)
T PRK03545 292 NSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAPDATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAVLALA 371 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 78999999999999999987899999999878896789999999999999999999999999822746899999999999
Q ss_pred HHHHHHHHHHHHHCCCCC
Q ss_conf 999999853111020127
Q gi|254780843|r 401 IAIYGIYCCYKENNFEQN 418 (420)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~ 418 (420)
..++.++..||.+....|
T Consensus 372 al~~~~~~~Rr~r~~~~~ 389 (390)
T PRK03545 372 ALVWAIFIFRRFRAVTLE 389 (390)
T ss_pred HHHHHHHHHHHHHCCCCC
T ss_conf 999999999886415678
No 8
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=0 Score=253.99 Aligned_cols=401 Identities=11% Similarity=0.017 Sum_probs=267.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
Q ss_conf 53112005999999999999999987389989999998099989999999999999999999999999852628999999
Q gi|254780843|r 3 DTIARNIQCTKIYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTG 82 (420)
Q Consensus 3 ~~~~k~~~~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~ 82 (420)
+.++|+.|...+....-.++.++|..+++...|.+++|+++|+.|.+++.++.+++..++++..|+++||+|||+++..+
T Consensus 10 ~~lt~~~~r~~~~a~~G~~~d~yD~~~~~~~~~~i~~~~~ls~~~~~~~~s~~~~g~~iGa~i~G~laDr~GRk~~l~~s 89 (426)
T PRK12307 10 SEITRPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWS 89 (426)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_conf 85899999999999999999999999999999999865599888999999999999999999999999975539999999
Q ss_pred HHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 99764321000000132024678999887775678887653100001230357887766443110000345478888864
Q gi|254780843|r 83 LLIMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLM 162 (420)
Q Consensus 83 ~~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 162 (420)
.+++++++++++++ ++++.+.+.|+++|++.+...+...+++.|..|+++|++..+..+.+..+|..+++.+...+.
T Consensus 90 il~~~i~t~l~~~a---~~~~~l~i~R~l~Gig~Gg~~~~a~~~~~E~~p~~~Rg~~~~~~~~g~~~G~~la~~l~~~~~ 166 (426)
T PRK12307 90 IVAYSVGTGLSGLA---SGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFA 166 (426)
T ss_pred HHHHHHHHHHHHHH---CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999862---319999999999980134456689999998674122199999999986999999999999985
Q ss_pred HCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCC---CCC
Q ss_conf 12342046776555557789888642001121100134555543210123101233210001111222111111---100
Q gi|254780843|r 163 LGNLASPNTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRF---TMG 239 (420)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 239 (420)
...+ |+............. . .... .. ++..... +.+.++++++.++.........+...+++.. ...
T Consensus 167 ~~~G-WR~~F~ig~lp~ll~-~---~~r~-~l-pESp~~~---~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 236 (426)
T PRK12307 167 EAYG-WRAAFFVGLLPVLLV-I---YIRA-RA-PESKEWE---EAKLSGPGKHSQSAWSVFSLSMKGLFNRAQFPLTLCV 236 (426)
T ss_pred HCCC-HHHHHHHHHHHHHHH-H---HHHH-HC-CCCHHHH---HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 5778-499999999999999-9---9998-28-9987789---8664442322330266643569999887699999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf 01110001355677899998754201222101246888999987643100111111000000000124555545676899
Q gi|254780843|r 240 AVCIFLYVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILS 319 (420)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (420)
....+...........+.+.+... .+.+.................+....++..||.++++..........+.....
T Consensus 237 ~~~~~~~~~~~~~~~~~~p~~l~~---~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~DriGRr~~~~~~~i~~~i~~~~~ 313 (426)
T PRK12307 237 FIVLFSIFGANWPIFGLLPTYLAG---EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPL 313 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999998---69989999999999999999999999999999876999999999999999999
Q ss_pred HH-CCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 62-233689999999999--999999999999996301565699--9999999999999999999999961237999999
Q gi|254780843|r 320 SY-TTGFISGWSLIAVGL--FNSIMFPTIFSLASASLEDQASGG--SGIICTTISGGVIIPLGVGYLVDIASLRDAMFVP 394 (420)
Q Consensus 320 ~~-~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~i~p~i~G~l~d~~g~~~~~~~~ 394 (420)
.. .......+...+.++ ......+.......|.+|.+.+.. +.....+.+|+.++|.+.|++.|++|...+....
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ElfPt~vR~tg~G~~~~~grigg~~~P~i~~~L~~~~G~~~a~~~~ 393 (426)
T PRK12307 314 FRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTFI 393 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
T ss_conf 99971389999999999999999999999999998498989999999999999999999999999999887945899999
Q ss_pred --HHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf --9999999999998531110201279
Q gi|254780843|r 395 --AVCYIIIAIYGIYCCYKENNFEQNT 419 (420)
Q Consensus 395 --~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (420)
..+..+..+.++....+.++.+|||
T Consensus 394 ~~~~~~~~~~~~~l~~p~~~~~~~e~~ 420 (426)
T PRK12307 394 VAFWTATILLIIGLSIPDRLKARRESF 420 (426)
T ss_pred HHHHHHHHHHHHHHCCHHHHCHHHHHH
T ss_conf 999999999999972803011117877
No 9
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=100.00 E-value=0 Score=249.16 Aligned_cols=386 Identities=18% Similarity=0.088 Sum_probs=264.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
Q ss_conf 11200599999999999999998738998999999809998999-----9999999999999999999999852628999
Q gi|254780843|r 5 IARNIQCTKIYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQA-----MLVEAIFFSCYFFFSIPAGMFIQRYGYIKGI 79 (420)
Q Consensus 5 ~~k~~~~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~-----g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l 79 (420)
...|.|..++.+++..|+..+..+++.|.+|.+.+|+|.+..+. |++.+++.+...+.+|++|.++||+|||+++
T Consensus 6 ~~~~w~~~l~~l~~~~f~~~~g~~~i~P~lP~y~~~lg~~~~~~~~~~~Gli~s~~~l~~~i~sp~~G~lsDr~GRK~il 85 (406)
T PRK09874 6 TPINWKRNLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIML 85 (406)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 98675399999999999999999999999999999949980779999999999999999999999999999980648999
Q ss_pred HHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
Q ss_conf 99999764321000000132024678999887775678887653100001230357887766443110000345478888
Q gi|254780843|r 80 CTGLLIMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGS 159 (420)
Q Consensus 80 ~~~~~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 159 (420)
+.+++..+++.++++++ ++++.+.+.|+++|++.+. .++..+++.|..|+++|++.++........|..+||.+++
T Consensus 86 l~gl~~~~i~~~l~~~a---~s~~~ll~~R~l~Gi~~~~-~~~a~a~iad~~p~~~rg~~~g~~~~~~~~G~~~GP~iGg 161 (406)
T PRK09874 86 LRSALGMGIVMVLMGMA---QNIWQFLILRALLGLLGGF-VPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGG 161 (406)
T ss_pred HHHHHHHHHHHHHHHHH---CCHHHHHHHHHHHHHCCCH-HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999873---6099999999999870550-8889999998467756999999999999988888876799
Q ss_pred HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCC-
Q ss_conf 8641234204677655555778988864200112110013455554321012310123321000111122211111110-
Q gi|254780843|r 160 VLMLGNLASPNTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTM- 238 (420)
Q Consensus 160 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 238 (420)
.+.+...+...+................... +... +.++ +++.+.++.....++++...
T Consensus 162 ~l~~~~g~~~~F~~~a~~~~~~~ll~~~~~~---------------~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~ 221 (406)
T PRK09874 162 LLADHYGLRPVFFITASVLFLCFLVTLFCIR---------------EKFQ-PVSK----KEMLHVREVVTSLKNPKLVLS 221 (406)
T ss_pred HHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC---------------CCCC-CCCC----CCCCCHHHHHHHHCCCHHHHH
T ss_conf 9999736299999999999999999998636---------------4568-8542----111206689988535369999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHH
Q ss_conf 0011100013556778999987542012-221012468889999876431001111110000000001245555456768
Q gi|254780843|r 239 GAVCIFLYVGAEVAIGSIMANYLMRHDT-LHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVI 317 (420)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (420)
.................+.+.|..+... .+......+.............+...+++.||+++++..............
T Consensus 222 ~~~~~~~~~~~~~~~~~~l~~y~~~~~~~~~~~~~~~g~~~~~~gi~~~l~~~~~G~l~dr~g~~~~~~~~~~~~~~~l~ 301 (406)
T PRK09874 222 LFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIISVLLLI 301 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999998365444999999999999999999999999999873839999999999999999
Q ss_pred HHHHCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 996223368-999999999999999999999999630156-56999999-999999999999999999961237999999
Q gi|254780843|r 318 LSSYTTGFI-SGWSLIAVGLFNSIMFPTIFSLASASLEDQ-ASGGSGII-CTTISGGVIIPLGVGYLVDIASLRDAMFVP 394 (420)
Q Consensus 318 ~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~g~~i~p~i~G~l~d~~g~~~~~~~~ 394 (420)
.....+..+ ......+.|++.+...|...+...+..|++ ++.+.+.. ....+|..+||.+.|.+.|..|++..|+++
T Consensus 302 ~l~~~~~~~~l~i~~~l~G~g~g~~~P~~~~~~~~~~~~~~~G~~~g~~~~~~~lG~~~GPll~G~l~~~~G~~~~f~i~ 381 (406)
T PRK09874 302 PMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVT 381 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 99999759999999999999999999999999987588847779999999999999999999999999974859999999
Q ss_pred HHHHHHHHHHHHHHHHHHHC
Q ss_conf 99999999999985311102
Q gi|254780843|r 395 AVCYIIIAIYGIYCCYKENN 414 (420)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~ 414 (420)
+...++.+++.....||++.
T Consensus 382 a~~~l~~~~~~~~~~r~~r~ 401 (406)
T PRK09874 382 AGVVLFNAIYSWNSLRRRRI 401 (406)
T ss_pred HHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999998843436
No 10
>PRK03893 putative sialic acid transporter; Provisional
Probab=100.00 E-value=0 Score=246.58 Aligned_cols=410 Identities=12% Similarity=0.058 Sum_probs=272.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
Q ss_conf 53112005999999999999999987389989999998099989999999999999999999999999852628999999
Q gi|254780843|r 3 DTIARNIQCTKIYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTG 82 (420)
Q Consensus 3 ~~~~k~~~~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~ 82 (420)
++++|.++.......+..++.+++..+++...|.+++|||+|..|.|++.|+.++++.++++..|+++||+|||++++++
T Consensus 5 r~lsr~qw~i~~~~~lg~~~d~~D~~~~~~~~p~i~~~~~ls~~~~g~~~s~~~~g~~iGa~~~G~laDr~GRr~~~~~~ 84 (486)
T PRK03893 5 RHLNRAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVIS 84 (486)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_conf 67999999999999999999999999999999999988597988999999999999999999999999984569999999
Q ss_pred HHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 99764321000000132024678999887775678887653100001230357887766443110000345478888864
Q gi|254780843|r 83 LLIMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLM 162 (420)
Q Consensus 83 ~~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 162 (420)
.+++++++++++++ ++++.+.+.|+++|+|.+...+...+++.|+.|+++|++..++.+.++.+|..+++.+...+.
T Consensus 85 ~~~~~~~~~~~a~a---~~~~~l~~~R~l~G~g~Gg~~~~~~~~~~E~~P~~~Rg~~~~~~~~g~~~G~~la~~~~~~~~ 161 (486)
T PRK03893 85 IVLFSAGTLACGFA---PGYTTMFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVLAAQVYSLVV 161 (486)
T ss_pred HHHHHHHHHHHHHH---CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999999999982---889999999999742261202489999998775604799999999999999999999999981
Q ss_pred HCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH---H---HCCCCCCHHH--HHHHCCCCCCC--CCCC
Q ss_conf 12342046776555557789888642001121100134555543---2---1012310123--32100011112--2211
Q gi|254780843|r 163 LGNLASPNTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWL---C---WMQRNSFADH--KRNHISFLKTL--DILA 232 (420)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~--~~~~~~~~~~~--~~~~ 232 (420)
...+ |+...................+..............+.. . +.+++..+.. ........... ....
T Consensus 162 ~~~g-WR~~f~iG~lP~ll~l~lr~~LPESprwl~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (486)
T PRK03893 162 PVWG-WRALFFIGILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRILNIVLTLAAAAALWFCFAGNLQN 240 (486)
T ss_pred CCCC-HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 1535-699999999999999999980999878998765231577899998513442102455320003566652022342
Q ss_pred CC----------------------CCCC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 11----------------------1110----001110001355677899998754201222101246888999987643
Q gi|254780843|r 233 NP----------------------RFTM----GAVCIFLYVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAM 286 (420)
Q Consensus 233 ~~----------------------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (420)
.. ..+. ......+..........+.+++.... .+.+.............+..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~fl~~w~~~~~lPt~L~~~--~g~~~~~~~~~~~~~~lg~~ 318 (486)
T PRK03893 241 AAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTD--LGYDPHTVANVLFFSGFGAA 318 (486)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHHHH
T ss_conf 0468889998889999999873135789999999999999999988999999999975--18888899999999999999
Q ss_pred HHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHC-CHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q ss_conf 100111111000000000124555545676899622-336--8999999999999999999999999630156569999-
Q gi|254780843|r 287 IGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYT-TGF--ISGWSLIAVGLFNSIMFPTIFSLASASLEDQASGGSG- 362 (420)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~- 362 (420)
.+....+++.||+++++................... ... ......+..+++....+...+.+..|.+|.+.+..+.
T Consensus 319 vG~l~~g~L~DriGrr~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~l~f~~~~~~~G~~~~~~~y~~E~yPT~vRaTG~G 398 (486)
T PRK03893 319 VGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGIAGLLPKLIGGYFDTEQRAAGLG 398 (486)
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_conf 99999999998948589999999999999999999756469999999999999999999999999887488969889999
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf -999999999999999999999612379999999--99999999999853111020127
Q gi|254780843|r 363 -IICTTISGGVIIPLGVGYLVDIASLRDAMFVPA--VCYIIIAIYGIYCCYKENNFEQN 418 (420)
Q Consensus 363 -~~~~~~~g~~i~p~i~G~l~d~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 418 (420)
....+.+|++++|.+.|.+++..|...+..... .+++++.+.++....+.||.-++
T Consensus 399 ~a~~vGRlG~ii~P~i~g~L~~~~~lg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 457 (486)
T PRK03893 399 FTYNVGALGGALAPILGALIAQRLGLGTALGSLSFSLTFVVILLIGLDMPSRVQRWLRP 457 (486)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCC
T ss_conf 99999999999999999999870895189999999999999999995077985766896
No 11
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=2.8e-45 Score=243.38 Aligned_cols=382 Identities=9% Similarity=-0.032 Sum_probs=280.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
Q ss_conf 59999999999999999873899899999980999899999999999999999999999998526289999999976432
Q gi|254780843|r 10 QCTKIYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLG 89 (420)
Q Consensus 10 ~~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~ 89 (420)
|...+.+.+.-|..|.+..+...++|++.+|||.|..|+|++.|.|.+++.+++|+.|.++||+|||++++.++.++.++
T Consensus 2 ~~~l~~Lal~~F~~gt~Ef~~~GlLp~ia~~l~vs~~~aG~lvt~yal~~ai~~p~~~~l~~r~~Rk~~ll~~l~~f~~~ 81 (389)
T PRK10091 2 KKVILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIG 81 (389)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 28999999999999888897994359899785999899999999999999999999999982368099999999999999
Q ss_pred HHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCH
Q ss_conf 10000001320246789998877756788876531000012303578877664431100003454788888641234204
Q gi|254780843|r 90 CILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASP 169 (420)
Q Consensus 90 ~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~ 169 (420)
+++++++ +||+.+.+.|+++|.+.+...+....+..|..|+++|++.++....+..++...|+.+++.+.+...|+.
T Consensus 82 ~~l~a~a---~~~~~ll~~R~l~G~~~g~~~~~~~~~~~~~~p~~~~g~a~a~v~~g~s~a~v~G~p~g~~l~~~~gWR~ 158 (389)
T PRK10091 82 NAMFTLS---SSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIDPGKVTAAVAGMVSGMTVANLFGIPLGTYLSQEFSWRY 158 (389)
T ss_pred HHHHHHC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
T ss_conf 9999986---8899999999999966579999999999996887789999999999999999999999999987448899
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 67765555577898886420011211001345555432101231012332100011112221111111000111000135
Q gi|254780843|r 170 NTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYVGA 249 (420)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (420)
.+..............+.... +.++++ +...++..+..+++..+............
T Consensus 159 ~F~~~~~l~~~~~~~~~~~lP-----------------~~~~~~-------~~~~~~~~~~l~~~~~~~~~~~~~l~~~~ 214 (389)
T PRK10091 159 TFLLIAVFNIAVLASIWFWVP-----------------DIRDEA-------DGGLREQFHFLRSPAPWLIFAATMFGNAG 214 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHCC-----------------CCCCCC-------CCCHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 999999999999999999789-----------------998878-------89858899883681999999999999999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHC--CHHHH
Q ss_conf 5677899998754201222101246888999987643100111111000000000124555545676899622--33689
Q gi|254780843|r 250 EVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYT--TGFIS 327 (420)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 327 (420)
......+...+..+. .+.+....+.....+..+...+....++..||.++++................... .....
T Consensus 215 ~f~~~tyi~p~L~~~--~g~s~~~i~~~l~~~Gig~i~G~~l~Grl~Dr~g~~~~~~~~~~~~~~~ll~l~~~~~~~~~~ 292 (389)
T PRK10091 215 VFAWFSYIKPYMMFI--SGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTTS 292 (389)
T ss_pred HHHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999984--299977999999999999999999999997622741599999999999999999988769999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999630156569999999-9999999999999999996-123799999999999999999
Q gi|254780843|r 328 GWSLIAVGLFNSIMFPTIFSLASASLEDQASGGSGIIC-TTISGGVIIPLGVGYLVDI-ASLRDAMFVPAVCYIIIAIYG 405 (420)
Q Consensus 328 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~i~p~i~G~l~d~-~g~~~~~~~~~~~~~~~~~~~ 405 (420)
.....+.+.+.....+..+....+..|+....++..+. ..++|.++|+.+.|.+.|+ .|++...++.++..++.....
T Consensus 293 ~v~~~l~~~~~~~~~~~~q~~~~~~a~~~~~~a~al~~sa~nlGialGs~~GG~~l~~g~g~~~~~~~ga~l~~~al~~~ 372 (389)
T PRK10091 293 LIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAGGQIAFNLGSAIGAYCGGLMLTLGLAYNYVALPAALLSFAAMSSL 372 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99999999999997799999999878897668999999999999999999999999769994038999999999999999
Q ss_pred HHHHHHHHCCCCCCC
Q ss_conf 985311102012797
Q gi|254780843|r 406 IYCCYKENNFEQNTP 420 (420)
Q Consensus 406 ~~~~~~~~~~~~~~P 420 (420)
+...|++++...+.|
T Consensus 373 l~~~r~~r~~~~~~~ 387 (389)
T PRK10091 373 LLYGRYKRQQAADSP 387 (389)
T ss_pred HHHHHHHHCCCCCCC
T ss_conf 999876502311288
No 12
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=0 Score=248.93 Aligned_cols=396 Identities=11% Similarity=0.003 Sum_probs=265.9
Q ss_pred CCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
Q ss_conf 531120059999999999----9999998738998999999809998999999999999999999999999985262899
Q gi|254780843|r 3 DTIARNIQCTKIYIFILF----FLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKG 78 (420)
Q Consensus 3 ~~~~k~~~~~~i~i~~~f----f~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~ 78 (420)
|...|..+..++-+++.. ..+-+++...+.+.|.++||+|+|.+|.|++.|+++++|++++++.|.++||+|.|+.
T Consensus 18 ~~~~~~~~~~~~~~f~~~figY~~~Y~~R~nfs~a~p~l~~elgls~~~lG~I~Saf~i~Yaigkf~~G~l~Dr~~~R~f 97 (463)
T PRK09556 18 EVRRKMWFKPFMQSYLVVFIGYLTMYLIRKNFNIAQNDMIETYGLSMTELGMIGLGFSITYGVGKTLVSYYADGKNTKQF 97 (463)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHH
T ss_conf 99998999999999999999999999702028976799998839898899999999999999987545244531574155
Q ss_pred HHHHHHHHHHHHHCCHHC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHH
Q ss_conf 999999764321000000--132024678999887775678887653100001230357887766443110000345478
Q gi|254780843|r 79 ICTGLLIMSLGCILFTAT--IEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPY 156 (420)
Q Consensus 79 l~~~~~~~~i~~ll~~~a--~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 156 (420)
+..++++.++.+++++.+ ...++++.+.+.+++.|..++..+|+....+..|+++++|++.+++++...++|..+++.
T Consensus 98 l~~gl~ls~i~~~~fG~~~~~~~~s~~~~~~l~~lnG~fQ~~GwP~~~~~l~~WF~~~eRG~~~giwn~s~nvG~~l~~~ 177 (463)
T PRK09556 98 LPFMLILSAICMLGFSASMGSGSVSLFLMIAFYALSGFFQSTGGPCSYSTITKWTPRRKRGTYLGFWNISHNIGGAGAAG 177 (463)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHH
T ss_conf 99999999999999999886368899999999999887844545089999999739311213324774201037889999
Q ss_pred HHHHHHHCCC--CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH--HCCCCCCHHHHHHHCC--CCCCCCC
Q ss_conf 8888641234--20467765555577898886420011211001345555432--1012310123321000--1111222
Q gi|254780843|r 157 IGSVLMLGNL--ASPNTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLC--WMQRNSFADHKRNHIS--FLKTLDI 230 (420)
Q Consensus 157 ~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~ 230 (420)
+......... ++........................ .+........++. +..++++.+.++++.. ..-....
T Consensus 178 ia~~~~~~~~~~~~~~~Fi~pgii~i~~~i~~~~~~~d--~Pe~~Gl~~~ee~~~~~~~~~~~~~~~~~~s~~~~~~~~v 255 (463)
T PRK09556 178 VALFGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSD--SPEEYGLGKAEELFGEEISEEDKETESNDMTKWQIFVEYV 255 (463)
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC--CHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 99999999824329999999999999999999998179--9777599975655145422111111223454578999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHH
Q ss_conf 11111110001110001355677899998754201222101246888999987643100111111000000000124555
Q gi|254780843|r 231 LANPRFTMGAVCIFLYVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFAT 310 (420)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (420)
.+++..|......++.....+....|.|.|..+.. +.+....+...+.+..+.+.+....++++|+.+.|+.......
T Consensus 256 l~np~vw~lala~~f~y~Vryg~~~WlP~YL~~~~--g~s~~~a~~~~~lfevggi~G~ll~G~iSD~~~GRR~~~~~~~ 333 (463)
T PRK09556 256 LKNKVIWLLCFANIFLYIVRIGIDQWSPVYAFQEL--KFSKEDAIQGFTLFEIGALVGTLLWGWLSDLANGRRALVACIA 333 (463)
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 72729999999999999999999876499999714--9997787699999999999899989899874158608999999
Q ss_pred HHHHHHHHHH--H-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH-HHHH-HHHHHHHHHHHHHHHH
Q ss_conf 5456768996--2-233689999999999999999999999996301565-6999999-9999-9999999999999996
Q gi|254780843|r 311 TACSLVILSS--Y-TTGFISGWSLIAVGLFNSIMFPTIFSLASASLEDQA-SGGSGII-CTTI-SGGVIIPLGVGYLVDI 384 (420)
Q Consensus 311 ~~~~~~~~~~--~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~-~g~~i~p~i~G~l~d~ 384 (420)
.......+.. . ++.......+.++|++...-...+...+.|..|+++ +.++++. .+++ +|.+.++...|.+.|.
T Consensus 334 l~~~~~~l~~y~~~~~~~~~~~~l~~iGf~I~GP~~Lig~~a~~~~pk~a~gta~G~~G~f~yl~G~~~a~~~~g~i~d~ 413 (463)
T PRK09556 334 LALIIFTLGVYQHATSVYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVADGIKGTFAYLIGDSFAKLGLGMIADG 413 (463)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999817858999999999999980299999999998504535545441210589887588787779988614
Q ss_pred H------HHHHHHHHHHHHHHHHH
Q ss_conf 1------23799999999999999
Q gi|254780843|r 385 A------SLRDAMFVPAVCYIIIA 402 (420)
Q Consensus 385 ~------g~~~~~~~~~~~~~~~~ 402 (420)
+ ||+..|+++.++.+++.
T Consensus 414 ~~~~~~~GW~~~F~~l~~~~~~~~ 437 (463)
T PRK09556 414 TPIFGLTGWAGTFAALDIAAIGCI 437 (463)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 555666771158899999999999
No 13
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=100.00 E-value=1.4e-45 Score=244.69 Aligned_cols=379 Identities=13% Similarity=0.074 Sum_probs=260.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHH
Q ss_conf 99999999999873899899999980999899999999999999999999999998526289999999976432100000
Q gi|254780843|r 16 IFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTA 95 (420)
Q Consensus 16 i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~ 95 (420)
.+.+..+.-+...++-|.+|++++|||.|++++++..|.|++++++++++.|+++||+||||+++.|+.++.++++++.+
T Consensus 8 ~~~l~~l~plaiD~ylPalP~i~~~f~~s~~~~qltis~f~~g~a~~ql~~GplsD~~GRr~vll~gl~l~~i~s~~~~~ 87 (392)
T PRK10473 8 SFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGALLFIIASLLCSL 87 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999998899999996199999997979999999999999999999999899999848839999999999999999998
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf 01320246789998877756788876531000012303578877664431100003454788888641234204677655
Q gi|254780843|r 96 TIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSMLA 175 (420)
Q Consensus 96 a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~ 175 (420)
+ ++++.+...|+++|+|.+...+...+++.|.+++++|++.++.......++..++|.+++.+.+...|...++...
T Consensus 88 a---~~~~~ll~~R~lqG~g~~~~~v~~~aii~D~~~~~~~~~~~s~~~~~~~~~p~~aP~lGg~l~~~~gW~~~F~~l~ 164 (392)
T PRK10473 88 A---ETSSLFLAGRFLQGLGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMA 164 (392)
T ss_pred H---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_conf 6---3699999999999968877999999999997699999799899999999988888889999998749499999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 55577898886420011211001345555432101231012332100011112221111111000111000135567789
Q gi|254780843|r 176 DTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYVGAEVAIGS 255 (420)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (420)
............... +..++++ ++.....+......+++..................+..
T Consensus 165 ~~~~l~~l~~~~~lp---------------ET~~~~~-----~~~~~~~~~~~~~l~~r~fl~~~l~~~l~~~~~f~fis 224 (392)
T PRK10473 165 AMGIAVLLLSLFILK---------------ETRPARA-----PAASSKPRENSESLLNRFFLSRLVITTLSVSVILTFVN 224 (392)
T ss_pred HHHHHHHHHHHHHCC---------------CCCCCCC-----CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999687---------------8899876-----64024899999998082379999999999999999998
Q ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHH
Q ss_conf 999875420122210124688899998764310011111100000000012455554567689962-2336899999999
Q gi|254780843|r 256 IMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSY-TTGFISGWSLIAV 334 (420)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 334 (420)
..+.. ..+..+.+....+............+.....+..+|++.+++................. ...........+.
T Consensus 225 ~sp~i--~~~~~gls~~~fg~~f~~~~~~~~~gs~l~~~l~~r~g~~~ll~~g~~l~l~~~~~l~~~~~~~~~l~~~~l~ 302 (392)
T PRK10473 225 TSPVL--LMEQMGFERGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGFTLI 302 (392)
T ss_pred HCHHH--HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 07999--9999189889999999999999999999999999995799999999999999999999988888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Q ss_conf 99999999999999996301565699999999-9999999999999999961237999999999999999-999853111
Q gi|254780843|r 335 GLFNSIMFPTIFSLASASLEDQASGGSGIICT-TISGGVIIPLGVGYLVDIASLRDAMFVPAVCYIIIAI-YGIYCCYKE 412 (420)
Q Consensus 335 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~i~p~i~G~l~d~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~ 412 (420)
..+.+..+|...+.+.+..|+.++.+++.... ...++++++.+.|.+.|..- .....++..|-++..+ +.+....|.
T Consensus 303 ~~g~~~~~~~~~a~Al~~~~~~AGtASal~G~~q~~~~al~~~l~~~l~~~~~-~~~~~~m~~~s~lal~~~l~v~~~~~ 381 (392)
T PRK10473 303 CAGFSVGFGVAMSQALGPFSLRAGVASSTLGIAQVCGSSLWIWLAAVLGISAW-NMLIGILIACSIVSLLLILFVAPGRP 381 (392)
T ss_pred HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH-HHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99999999999999966575141199999999999999999999998678847-89999999999999999999818987
Q ss_pred HCCCCCCC
Q ss_conf 02012797
Q gi|254780843|r 413 NNFEQNTP 420 (420)
Q Consensus 413 ~~~~~~~P 420 (420)
-+.+|++|
T Consensus 382 ~~~~~~~~ 389 (392)
T PRK10473 382 VAAHEEIP 389 (392)
T ss_pred CCCCCCCC
T ss_conf 86767899
No 14
>TIGR00895 2A0115 MFS transporter, aromatic acid:H+ symporter (AAHS) family; InterPro: IPR004746 Benzoate transport proteins belong to this group. Benzyl alcohol, benzaldehyde, benzoate, and anthranilate are metabolized via catechol, cis,cis-muconate, and the beta-ketoadipate pathway in some bacteria.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=100.00 E-value=0 Score=249.11 Aligned_cols=376 Identities=14% Similarity=0.054 Sum_probs=289.0
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----H
Q ss_conf 97531120059999999999999999873899899999980999899999999999999999999999998526-----2
Q gi|254780843|r 1 MKDTIARNIQCTKIYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYG-----Y 75 (420)
Q Consensus 1 m~~~~~k~~~~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G-----r 75 (420)
+|++++|......++.++..++-|+|..+.+...|.+++|+++|+.|.|++.|.-.+|.++++++.|+++|||| |
T Consensus 7 ~~~~~~r~~~~~~~~~~l~~l~DG~Dl~~~gf~ap~l~~~w~l~~~~~G~l~S~gL~G~~~Gal~~G~~aDr~GhlGvsR 86 (413)
T TIGR00895 7 RKQPLSRYQWRAIILSFLIMLVDGLDLAALGFAAPALSAEWGLDPVQLGFLLSAGLIGMAFGALFFGPLADRIGHLGVSR 86 (413)
T ss_pred HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
T ss_conf 32788568999999999999962599999999976888885889141007899999999987999987878650354139
Q ss_pred HHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHH
Q ss_conf 89999999976432100000013202467899988777567888765310000123035788776644311000034547
Q gi|254780843|r 76 IKGICTGLLIMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFP 155 (420)
Q Consensus 76 r~~l~~~~~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 155 (420)
||+++.+.+++++.+++++++ ++++.+.+.|++.|+|.|...|...++.+|+.|+|+|+...+....++.+|...|.
T Consensus 87 ~r~l~~~~llF~~ft~~~a~A---~~~~qL~~~R~~AGlGlGg~~pn~~aL~sEY~p~r~R~~~vg~~~~Gy~~G~~~gg 163 (413)
T TIGR00895 87 KRVLLWSILLFSVFTLLCALA---TNVTQLLILRFLAGLGLGGLMPNLIALVSEYAPKRFRGTAVGLMFCGYAIGAAVGG 163 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999998874---04799999999985549999999999998435763346688888876789999999
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH--------HHHHH---C--------CCCCCHH
Q ss_conf 888886412342046776555557789888642001121100134555--------54321---0--------1231012
Q gi|254780843|r 156 YIGSVLMLGNLASPNTSMLADTMKDYQTDTARVISQMYLVLAIILFLA--------TWLCW---M--------QRNSFAD 216 (420)
Q Consensus 156 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~---~--------~~~~~~~ 216 (420)
.+++.++....|...+..-.............+++............. ...+. + .++++.+
T Consensus 164 ~l~~~LiP~~GWr~~F~vGG~~Pl~ll~~l~~~LPES~~fl~~kg~~~~~~~~~~n~I~p~~~~~~~~Rfvl~~~~~~~~ 243 (413)
T TIGR00895 164 FLAGWLIPAFGWRSLFYVGGIIPLLLLLLLMRFLPESIDFLVEKGKRPEKVRRIVNAIAPQLQAEAQSRFVLALPEQKSA 243 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCH
T ss_conf 99888754440799999999999999999997768768989770887579999987754542257654257763354100
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 3321000111122211111110001110-001355677899998754201222101246888999987643100111111
Q gi|254780843|r 217 HKRNHISFLKTLDILANPRFTMGAVCIF-LYVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWI 295 (420)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (420)
++..+...+-.++....+.....+.... +.....+....|+|.+...+ .+.+.............+.+.+....+.+
T Consensus 244 ~~~~~~~~~~lF~~~~~~~T~~LW~~y~G~~~~~~Y~l~~WlP~~L~~~--~G~~~~~~~~~~~~~~~Gg~~G~~~~g~l 321 (413)
T TIGR00895 244 QKTKRSVVKLLFQGKTAKITVLLWLLYFGMLLVGVYFLTNWLPSKLMVE--LGFSLSKAAIVGALFNFGGVIGSIIFGWL 321 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 1357899998733468757799999999999999999996113456653--48677789999999999899999999999
Q ss_pred CCHHHCCCHHHHHHHHHHHHHHHHH---HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHH
Q ss_conf 0000000001245555456768996---2233689999999999999999999999996301565--6999999999999
Q gi|254780843|r 296 LSRFSAEKTLCAFATTACSLVILSS---YTTGFISGWSLIAVGLFNSIMFPTIFSLASASLEDQA--SGGSGIICTTISG 370 (420)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g 370 (420)
.||+++++..........+...... ..+........++.|++........+++..+.+|... ...+.....+..|
T Consensus 322 ~Drl~~~~~~~~~~l~~avf~~~~~~~~~~~~~~~l~~~~~~G~~~~G~~~~~~a~m~~~Yp~~~RaTGvGw~~giGR~G 401 (413)
T TIGR00895 322 ADRLGPRFVTALLLLLGAVFAVLVGSSTLFSPTLLLLLGAIAGLFVNGGQSGLYALMAEFYPTAIRATGVGWAIGIGRLG 401 (413)
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHH
T ss_conf 99937619999999999999999998641029999999999999988588989875251040102146788888756899
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999999
Q gi|254780843|r 371 GVIIPLGVGYL 381 (420)
Q Consensus 371 ~~i~p~i~G~l 381 (420)
+.++|.+.|++
T Consensus 402 a~~gP~~~G~L 412 (413)
T TIGR00895 402 AIIGPILAGVL 412 (413)
T ss_pred HHHHHHHHHHH
T ss_conf 98999999882
No 15
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=100.00 E-value=2.8e-45 Score=243.83 Aligned_cols=382 Identities=12% Similarity=0.061 Sum_probs=255.9
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
Q ss_conf 1120059999999999-999999873899899999980999899999999999999999999999998526289999999
Q gi|254780843|r 5 IARNIQCTKIYIFILF-FLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGL 83 (420)
Q Consensus 5 ~~k~~~~~~i~i~~~f-f~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~ 83 (420)
|+|+.+..++++..+. .+.-+...++-|.+|++++|||.|++++++..|.|++++++++++.|+++||+||||+++.|+
T Consensus 1 m~~~~~~~~i~~l~~l~~~~~la~d~ylPalP~ia~~~~~s~~~vq~tls~f~~g~a~~ql~~GpLSDr~GRk~vll~gl 80 (394)
T PRK11652 1 MKRQRNVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGALQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGM 80 (394)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 99875547999999999999999988986099999996989989999999999999999999999998828869999999
Q ss_pred HHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 97643210000001320246789998877756788876531000012303578877664431100003454788888641
Q gi|254780843|r 84 LIMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLML 163 (420)
Q Consensus 84 ~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 163 (420)
.++.++++.+.++ +|++.+...|+++|+|.+...+...+.+.|.++++++++.++.......++..++|.+++.+.+
T Consensus 81 ~lf~i~s~~~a~a---~si~~ll~~R~lQG~Ga~~~~v~~~AiirD~~~g~~~ak~~s~~~~~~~~~p~laP~iGg~l~~ 157 (394)
T PRK11652 81 SIFILGTLVALTA---HSLTVLIAASAIQGMGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILFSPLLAPLIGGLLTT 157 (394)
T ss_pred HHHHHHHHHHHHH---HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 9999999999987---6799999999982766510000999998863689999999999889999851026169999980
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 23420467765555577898886420011211001345555432101231012332100011112221111111000111
Q gi|254780843|r 164 GNLASPNTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCI 243 (420)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (420)
...|...+..............+...... .+++ +++++.....+...+++..+......
T Consensus 158 ~~gWr~~F~~l~~~~~~~~l~~~~~lpET---------------~~~~------~~~~~~~~~y~~ll~~~~f~~~~l~~ 216 (394)
T PRK11652 158 LFGWRACYLFLLVFGAGVTFSMARWMPET---------------LPKD------ARRTRVLASYKTLLGNRRFNCYLLML 216 (394)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHCCCC---------------CCCC------CCCHHHHHHHHHHHHCHHHHHHHHHH
T ss_conf 05599999999999999999999968888---------------9964------56301899999998675799999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHH----
Q ss_conf 0001355677899998754201222101246888999987643100111111000000000124555545676899----
Q gi|254780843|r 244 FLYVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILS---- 319 (420)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 319 (420)
.........+....+.. ..+.++.+....+............+....++..+|.++..................
T Consensus 217 ~~~~~~~~~f~~~~p~v--~~~~~gls~~~~g~~f~~~~~~~~~g~~l~~rl~~r~~~~~~~g~~~~~~~~~~~l~~~~~ 294 (394)
T PRK11652 217 IATLAGIAVFEACAGVL--MGAVLGLSSMTVSILFILPIPGYFFGAWFAGRPNKRFSTLMWQSVICCLLGGLFMWIPGWF 294 (394)
T ss_pred HHHHHHHHHHHHHHHHH--HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999964999--9998279889999999999999999999999999999999999999999999999999988
Q ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 62233689999999999999999999999996301565699999999-99999999999999999612379999999999
Q gi|254780843|r 320 SYTTGFISGWSLIAVGLFNSIMFPTIFSLASASLEDQASGGSGIICT-TISGGVIIPLGVGYLVDIASLRDAMFVPAVCY 398 (420)
Q Consensus 320 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~i~p~i~G~l~d~~g~~~~~~~~~~~~ 398 (420)
...+.+.......+..++.+..+|...+.+.+..|++++.+++.... ...++++.+.+.|.+.|..-...+.... .+
T Consensus 295 ~~~~~~~l~~~~~l~~~g~G~~~p~~~a~al~~~~~~aGtAsal~g~~q~~~~~~~~~l~~~l~~~~~~~l~~~~~--~~ 372 (394)
T PRK11652 295 GVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPFLAGTAGALLGGLQNIGSGLAALLSAMLPQTGQGSLGLLMT--LM 372 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH--HH
T ss_conf 7745999999999999999988899999997648430309999999999999999999999713697689999999--99
Q ss_pred HHHHHHHHHHHHHHHC
Q ss_conf 9999999985311102
Q gi|254780843|r 399 IIIAIYGIYCCYKENN 414 (420)
Q Consensus 399 ~~~~~~~~~~~~~~~~ 414 (420)
.++.+.+.+..++|++
T Consensus 373 ~~~~l~~~l~l~~r~~ 388 (394)
T PRK11652 373 GLLILLCWLPLASRMS 388 (394)
T ss_pred HHHHHHHHHHHHHHCC
T ss_conf 9999999999986344
No 16
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=100.00 E-value=1.7e-44 Score=239.31 Aligned_cols=367 Identities=11% Similarity=0.046 Sum_probs=254.4
Q ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCCCCHHHH
Q ss_conf 99873899899999980999899999999999999999999999998526289999999976432100000013202467
Q gi|254780843|r 25 GITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATIEITTFKV 104 (420)
Q Consensus 25 ~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~~~~~~~ 104 (420)
+..+++-|.+|++++|||.|++|+++..|.|.+++++++++.|+++||+|||++++.++.++.++++++.++ +++..
T Consensus 5 l~~d~~lPalp~i~~~~~~s~~~~~~~~s~~~l~~a~~~l~~G~lsD~~GRr~~~~~~~~~~~i~~~~~~~a---~~~~~ 81 (377)
T PRK11102 5 LAIDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALA---QTIDQ 81 (377)
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH---CCHHH
T ss_conf 898799986999999979499899999999999999999999999998188899999999999999999985---67999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 89998877756788876531000012303578877664431100003454788888641234204677655555778988
Q gi|254780843|r 105 FLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSMLADTMKDYQTD 184 (420)
Q Consensus 105 ~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 184 (420)
+.+.|+++|++.+...+...+++.|.+++++|++.++.......++..++|.+++.+.+...|...++............
T Consensus 82 l~~~R~lqG~~~~~~~~~~~a~i~d~~~~~~~~~~~~~~~~~~~~~~~~~p~iGg~l~~~~gWr~~F~~~~~~~~l~~~l 161 (377)
T PRK11102 82 LIVMRFLQGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGYLLVWFSWHSIFWVLALAAILASAL 161 (377)
T ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99999998653001305889999970799999998799999999704888887799981356689999999999999999
Q ss_pred HHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 86420011211001345555432101231012332100011112221111111000111000135567789999875420
Q gi|254780843|r 185 TARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYVGAEVAIGSIMANYLMRH 264 (420)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (420)
.+.... +..+++++++.+.+...++.....+++..+.......+............+.+..
T Consensus 162 ~~~~lp-----------------et~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~f~~~~p~~~~-- 222 (377)
T PRK11102 162 VFFLIP-----------------ETLPPENRQPFHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYI-- 222 (377)
T ss_pred HHHHCC-----------------CCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_conf 999754-----------------4578446788779999999999995868999999999999999999983479999--
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHC---C-H-HHHHHHHHHHHHHHH
Q ss_conf 1222101246888999987643100111111000000000124555545676899622---3-3-689999999999999
Q gi|254780843|r 265 DTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYT---T-G-FISGWSLIAVGLFNS 339 (420)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~-~~~~~~~~~~g~~~~ 339 (420)
+.++.+..+.+............+....++..||+++++................... . . +.......+...+.+
T Consensus 223 ~~~gls~~~~gl~~~~~~~~~~~gs~l~grl~~r~g~~~~~~~gl~i~~~~~~~l~~~~~~~~~~~~~~i~~~l~~~~~g 302 (377)
T PRK11102 223 EIYGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCIS 302 (377)
T ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98299989999999999999999999999999995889999999999999999999999987779999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 999999999996301565699999999-999999999999999996123799999999999999999985311102
Q gi|254780843|r 340 IMFPTIFSLASASLEDQASGGSGIICT-TISGGVIIPLGVGYLVDIASLRDAMFVPAVCYIIIAIYGIYCCYKENN 414 (420)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~i~p~i~G~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (420)
...|...+...+..|+.++.+++.... ...++++...+.|.+.|...+..+.. ...|.++..+..++..|.+||
T Consensus 303 ~~~~~~~a~a~~~~p~~aG~Asal~g~~~~~~ga~~~~l~~~~~~~~~~~l~~~-~~~~~~la~l~~l~~~R~~~~ 377 (377)
T PRK11102 303 MISSNAMAVILDEFPHMAGTASSLAGTLRFGIGAIVGALLSLAPFNSAWPMIWS-MAFCSILSILFYLYASRPKKK 377 (377)
T ss_pred HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH-HHHHHHHHHHHHHHHHCCCCC
T ss_conf 999999999976671177999999999999999999999998537987999999-999999999999999073579
No 17
>PRK11043 inner membrane transport protein YdhC; Provisional
Probab=100.00 E-value=3e-43 Score=233.10 Aligned_cols=376 Identities=14% Similarity=0.080 Sum_probs=259.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
Q ss_conf 59999999999999999873899899999980999899999999999999999999999998526289999999976432
Q gi|254780843|r 10 QCTKIYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLG 89 (420)
Q Consensus 10 ~~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~ 89 (420)
|...+++..+..+--+...++-|.+|++.+||+.|++++++..|.|++++++++++.|+++||+|||++++.|+.++.++
T Consensus 5 ~~~l~lLa~l~algplaiDiyLPalP~ia~~f~~~~~~~qltls~fl~g~a~gql~~GplsD~~GRr~~ll~gl~~~~~~ 84 (401)
T PRK11043 5 KGFLVYLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSIFALG 84 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf 68999999999999999999984299999996969999999999999999999999999998827879999999999999
Q ss_pred HHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCH
Q ss_conf 10000001320246789998877756788876531000012303578877664431100003454788888641234204
Q gi|254780843|r 90 CILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASP 169 (420)
Q Consensus 90 ~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~ 169 (420)
++.+.++ +|+..+.+.|+++|+|.+...+...+.+.|.++++++.+.++.......++..++|.+++.+.....|..
T Consensus 85 s~~~~~a---~~~~~li~~R~lQg~g~~~~~v~~~aiirD~~~~~~~~~~~s~~~~~~~i~p~laP~iGg~l~~~~gWr~ 161 (401)
T PRK11043 85 SLGMLWV---ESAAMLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKAQRIFATIMPLVALSPALAPLLGAWLLNHFGWQA 161 (401)
T ss_pred HHHHHHH---HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf 9999988---8999999999998731014678888999841789999999999999999999999889999970478699
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 67765555577898886420011211001345555432101231012332100011112221111111000111000135
Q gi|254780843|r 170 NTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYVGA 249 (420)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (420)
.+............... ...+++++ .+.+..........+++..+............
T Consensus 162 iF~~l~~~gvll~l~~~-------------------~~~~e~~~----~~~~~~~~~y~~lL~~r~F~~~~l~~~~~~~~ 218 (401)
T PRK11043 162 IFATLFAITLLLILPTL-------------------WLKPSKKA----RNNSQDGLTFKQLLKSKTYLGNVLIFAACSAA 218 (401)
T ss_pred HHHHHHHHHHHHHHHHH-------------------HCCCCCCC----CCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_conf 99999999999999998-------------------65887788----87542356899998086889999999999999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHH---HHHC---C
Q ss_conf 567789999875420122210124688899998764310011111100000000012455554567689---9622---3
Q gi|254780843|r 250 EVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVIL---SSYT---T 323 (420)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~ 323 (420)
...+....+.. .+ ..+.+....+..........+.+.....+..+|++.++............... .... .
T Consensus 219 ~fayis~spfi-l~--~~G~s~~~fGl~f~~~~l~~i~Gs~l~~rl~~r~g~~~~l~~g~~l~~l~~~~l~~~~~~~~~~ 295 (401)
T PRK11043 219 FFAWLTGSPFI-ME--QMGYSPAVIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIFLAGLLSHVS 295 (401)
T ss_pred HHHHHHHHHHH-HH--HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999966999-99--9299999999999999999999999999999880899999999999999999999999870424
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 3689999999999999999999999996301565699999999-999999999999999996123799999999999999
Q gi|254780843|r 324 GFISGWSLIAVGLFNSIMFPTIFSLASASLEDQASGGSGIICT-TISGGVIIPLGVGYLVDIASLRDAMFVPAVCYIIIA 402 (420)
Q Consensus 324 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~i~p~i~G~l~d~~g~~~~~~~~~~~~~~~~ 402 (420)
.+.....+.+..++.+..+|...+.+.+..|+.++.+++.... ....+++...+.|.+.|..-...+... ..|. +++
T Consensus 296 ~~~l~~~~~l~~~g~G~i~pn~~a~Al~~f~~~AGtASaL~G~lQ~~~gal~s~lv~~~~~~~~~~m~~~m-~~~~-~~~ 373 (401)
T PRK11043 296 IVPILIPFCVMAAANGAIYPIVVAQALRPFPQATGKAAGLQNTLQLGLCFLASLLVSALISTPLLTTGSVM-LSTV-VLV 373 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH-HHHH-HHH
T ss_conf 99999999999999999999999999734813060999999999999999999999965369837999999-9999-999
Q ss_pred HHHHHHHHHHHCCCC
Q ss_conf 999985311102012
Q gi|254780843|r 403 IYGIYCCYKENNFEQ 417 (420)
Q Consensus 403 ~~~~~~~~~~~~~~~ 417 (420)
..+++ .+|+++++|
T Consensus 374 ~l~~~-l~r~~~~~~ 387 (401)
T PRK11043 374 ALGYK-LQRHAEWGE 387 (401)
T ss_pred HHHHH-HHHHHHHHH
T ss_conf 99999-986177503
No 18
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=2.2e-42 Score=228.78 Aligned_cols=366 Identities=12% Similarity=0.022 Sum_probs=252.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHC
Q ss_conf 999999999999987389989999-9980999899999999999999999999999998526289999999976432100
Q gi|254780843|r 14 IYIFILFFLFGGITSLNSILVPKL-QNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCIL 92 (420)
Q Consensus 14 i~i~~~ff~~g~~~~~~~~~~p~l-~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll 92 (420)
+.+.+.-|+..+..++.-|.+|.. +|++|.|+.++|++.++|.++..+.++++|+++||+||||+++.|++.++++.++
T Consensus 20 ~~i~~~~Fl~~l~~g~~~PvlP~y~~~~lg~s~~~iGli~~~f~l~~~i~~p~~G~lsDr~GRk~vll~gl~~~~l~~~~ 99 (395)
T PRK05122 20 VSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAVVAGLVISLQYFATLLSRPHAGRLADTLGPKKAVVFGLCGCFLSGLL 99 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999869998999999747996989999999999999999998999998348629899999999999999
Q ss_pred CHHCCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 0000132-----02467899988777567888765310000123035788776644311000034547888886412342
Q gi|254780843|r 93 FTATIEI-----TTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLA 167 (420)
Q Consensus 93 ~~~a~~~-----~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 167 (420)
+.++... .++..+...|+++|++.+...++..+++.|..|+++|++.++........|..+||.+++.+.+....
T Consensus 100 ~~~a~~~~~~~~~~l~~L~~~R~l~Gi~~a~~~~a~~a~~~~~~p~~rrg~~mg~~g~~~~lg~~iGP~iG~~l~~~~g~ 179 (395)
T PRK05122 100 YLLAGLLAAWPVLSLLLLLAGRLLLGIGESLAGTGSILWGIGRVGSEHTGRVISWNGIATYGALAIGAPLGVLLYHWGGL 179 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
T ss_conf 99998752003779999999999989899999999999998616898899999999999999999999999999997269
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 04677655555778988864200112110013455554321012310123321000111122211111110001110001
Q gi|254780843|r 168 SPNTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYV 247 (420)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (420)
............... ... ...+++++++ +++. +..+..+ .............
T Consensus 180 ~~~f~~~~~l~~~~~----~~~---------------~~~~~~~~~~----~~~~---~~~~~~~--~~~~~~~~~~l~~ 231 (395)
T PRK05122 180 AALGLLIMLLALLGL----LLA---------------RPRPPVPPVK----GERL---PFRRVLG--RVWPYGMGLALAS 231 (395)
T ss_pred HHHHHHHHHHHHHHH----HHH---------------HCCCCCCCCC----CCCC---CHHHHHH--HHHHHHHHHHHHH
T ss_conf 999999999999999----997---------------1278998767----7788---7899999--8899999999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCH-HH
Q ss_conf 35567789999875420122210124688899998764310011111100000000012455554567689962233-68
Q gi|254780843|r 248 GAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYTTG-FI 326 (420)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 326 (420)
........+.+.|... .+.+.. +.............+...++..||.++.++......+...........+. +.
T Consensus 232 ~~~~~i~~f~~ly~~~---~g~~~~--~~~~~~~~~~~~~~r~~~g~l~dr~g~~~~i~~~~~l~~~~l~ll~~~~~~~~ 306 (395)
T PRK05122 232 IGFGTIATFITLYYAA---RGWDGA--ALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLAVEILGLLLLWLAPSPWV 306 (395)
T ss_pred HHHHHHHHHHHHHHHH---CCCHHH--HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999988---273136--99999999999999998327878606448999999999999999998720999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999999630156-56999999-9999999999999999999612379999999999999999
Q gi|254780843|r 327 SGWSLIAVGLFNSIMFPTIFSLASASLEDQ-ASGGSGII-CTTISGGVIIPLGVGYLVDIASLRDAMFVPAVCYIIIAIY 404 (420)
Q Consensus 327 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~g~~i~p~i~G~l~d~~g~~~~~~~~~~~~~~~~~~ 404 (420)
......+.|++.+..+|...+...+..|++ ++.+.+.. ....+|..++|++.|++.|+.|++..|.+.++..++...+
T Consensus 307 ll~a~~l~G~G~g~~~P~l~a~~~~~~p~~~rG~a~g~~~~~~dlG~~iG~~l~G~la~~~G~~~~f~~~a~~~l~~~~l 386 (395)
T PRK05122 307 ALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFFDLSLGITGPLAGLVASWFGYPSIFLFAALAAALGLAL 386 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf 99999999999988889999999864987245799999999999999999999999999738368999999999999999
Q ss_pred HHHHHHHH
Q ss_conf 99853111
Q gi|254780843|r 405 GIYCCYKE 412 (420)
Q Consensus 405 ~~~~~~~~ 412 (420)
.++..||+
T Consensus 387 ~~~~~rr~ 394 (395)
T PRK05122 387 TLLLKRRP 394 (395)
T ss_pred HHHHHCCC
T ss_conf 99980689
No 19
>PRK12382 hypothetical protein; Provisional
Probab=100.00 E-value=1.4e-42 Score=229.75 Aligned_cols=369 Identities=12% Similarity=0.053 Sum_probs=259.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999873899899999-9809998999999999999999999999999985262899999999764321
Q gi|254780843|r 12 TKIYIFILFFLFGGITSLNSILVPKLQ-NSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGC 90 (420)
Q Consensus 12 ~~i~i~~~ff~~g~~~~~~~~~~p~l~-~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ 90 (420)
.++.+....|+.-+..+++-|.+|... +|+|.|+.++|++.++|.++..+.+|++|+++||+||||+++.|++++++..
T Consensus 16 ~l~~l~~~~F~~~~g~~~~~PvlP~y~~~~LGas~~~vGli~~~f~la~~~~~p~~G~l~Dr~GRk~vll~gl~~~a~~~ 95 (393)
T PRK12382 16 SLFRIAFAVFLTYMTVGLPLPVIPLFVHHELGYGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAG 95 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 79999999999999998799999999997369868899999999999999999988899980497089999999999999
Q ss_pred HCCHHCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
Q ss_conf 00000013-----2024678999887775678887653100001230357887766443110000345478888864123
Q gi|254780843|r 91 ILFTATIE-----ITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGN 165 (420)
Q Consensus 91 ll~~~a~~-----~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 165 (420)
+++..+.. ..+++.+.+.|.+.|.+.+...++..+++.|..|+++|++.++........+..+||.+++.+.+..
T Consensus 96 lly~~a~~~~~~~~~~~~~L~~~R~l~G~~~a~~~~~~~a~~~d~~p~~~rG~~mg~~g~~~~~g~aiGp~lG~~l~~~~ 175 (393)
T PRK12382 96 LAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPQHSGKVMSWNGMAMYGALAAGAPLGLLIHSHF 175 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999988777678999999999999898899999989999998647332328989988999999999998999999986
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 42046776555557789888642001121100134555543210123101233210001111222111111100011100
Q gi|254780843|r 166 LASPNTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFL 245 (420)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (420)
.......... ... ..... ... +.+++++ ++++.+ ...+.. +..+........
T Consensus 176 g~~~~~~~~~----~l~--l~~~~-------------~~~--~~~~~~~-~~~~~~-~~~~~~-----~~~~~~~l~~~l 227 (393)
T PRK12382 176 GFAALALTTM----VLP--LLAWA-------------FNG--TVRKVPA-LAGERP-SLWSVV-----GLIWKPGLGLAL 227 (393)
T ss_pred HHHHHHHHHH----HHH--HHHHH-------------HHC--CCCCCCC-CCCCCC-CHHHHH-----HHHHHHHHHHHH
T ss_conf 6999999999----999--99999-------------834--5778876-555566-589999-----999998999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCH-
Q ss_conf 0135567789999875420122210124688899998764310011111100000000012455554567689962233-
Q gi|254780843|r 246 YVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYTTG- 324 (420)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 324 (420)
....+.....+.+.|..+. +.+ ..+.....+.......+...+++.||++++++......+...........++
T Consensus 228 ~~~~~~~i~~f~~ly~~~~---~~~--~~g~~~~~~~~~~~l~r~~~G~l~Dr~G~~~v~~~gl~l~a~gl~~l~~~~~~ 302 (393)
T PRK12382 228 QGVGFAVIGTFVSLYFASK---GWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTA 302 (393)
T ss_pred HHHHHHHHHHHHHHHHHHC---CHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCH
T ss_conf 9999999999999999873---606--89999999999999999998289887085388999999999999999986209
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 68999999999999999999999999630156-56999999-99999999999999999996123799999999999999
Q gi|254780843|r 325 FISGWSLIAVGLFNSIMFPTIFSLASASLEDQ-ASGGSGII-CTTISGGVIIPLGVGYLVDIASLRDAMFVPAVCYIIIA 402 (420)
Q Consensus 325 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~g~~i~p~i~G~l~d~~g~~~~~~~~~~~~~~~~ 402 (420)
+......++.|++.+..+|...++..+..|++ ++.+.+.. ....+|..++|++.|.+.|+.|++..|++.+++.++..
T Consensus 303 ~~ll~~~~l~G~G~g~~~P~l~al~~~~~~~~~rG~a~g~~~~~~dlG~~~Gp~~~G~va~~~G~~~~F~~~av~~l~~l 382 (393)
T PRK12382 303 WVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGI 382 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 99999999999999887888999999758933103799999999999999999999999997493899999999999999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99998531110
Q gi|254780843|r 403 IYGIYCCYKEN 413 (420)
Q Consensus 403 ~~~~~~~~~~~ 413 (420)
...++..||.+
T Consensus 383 ~v~~~~~rr~~ 393 (393)
T PRK12382 383 GVTILSFRRGQ 393 (393)
T ss_pred HHHHHHHCCCC
T ss_conf 99999963889
No 20
>PRK10504 multidrug efflux system protein MdtE; Provisional
Probab=100.00 E-value=2.2e-42 Score=228.74 Aligned_cols=378 Identities=16% Similarity=0.139 Sum_probs=263.8
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
Q ss_conf 97531120059999999999999999873899899999980999899999999999999999999999998526289999
Q gi|254780843|r 1 MKDTIARNIQCTKIYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGIC 80 (420)
Q Consensus 1 m~~~~~k~~~~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~ 80 (420)
|+|+.. +.||....+.+-+|+..++.+++++.+|.+++|||.|..+..|+.+.|.+.+....+++|+++|||||||+++
T Consensus 1 ~~~~p~-~~rW~l~iv~l~~Fm~~ld~TivnvALP~i~~~l~~s~~~~~Wv~taY~L~~a~~~p~~G~laDrfG~rrvf~ 79 (471)
T PRK10504 1 MTDLPD-STRWQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADKVGVRNIFF 79 (471)
T ss_pred CCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_conf 999997-5379999999999999999979999999999986988737999999999999999999999999948779999
Q ss_pred HHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf 99997643210000001320246789998877756788876531000012303578877664431100003454788888
Q gi|254780843|r 81 TGLLIMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSV 160 (420)
Q Consensus 81 ~~~~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 160 (420)
.++.++.+++++++++ +|+..+.+.|.++|+|.+...|.....+.+.+|+++|++++++......+|..+||.+++.
T Consensus 80 ~gl~~F~~gSllca~A---~s~~~Li~~R~lQGiG~a~~~P~~~~ii~~~~p~~~~~~a~g~~~~~~~~g~~lGP~lGG~ 156 (471)
T PRK10504 80 TAIVLFTLGSLFCALS---GTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQIGPLLGPALGGL 156 (471)
T ss_pred HHHHHHHHHHHHHHHH---CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCH
T ss_conf 9999999999999971---7789999999998527621023034103423776889999999999999998853121001
Q ss_pred HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH------------HHHHHHCCCCCCH-------------
Q ss_conf 641234204677655555778988864200112110013455------------5543210123101-------------
Q gi|254780843|r 161 LMLGNLASPNTSMLADTMKDYQTDTARVISQMYLVLAIILFL------------ATWLCWMQRNSFA------------- 215 (420)
Q Consensus 161 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~------------- 215 (420)
+.+...|.+.+............................+.. ........+....
T Consensus 157 l~~~~~WrwiF~invPi~ii~~~~~~~~~p~~~~~~~~~D~~G~~l~~~~l~~l~~~l~~~~~~~~~~~~~~~l~~~~~~ 236 (471)
T PRK10504 157 LVEYASWHWIFLINIPVGIIGAIATLMLMPNYTMQTRRFDLSGFLLLAVGMAVLTLALDGSKGTGLSPLAIAGLVAVGVV 236 (471)
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
T ss_conf 01101023598760699999999999948876655566782879999999999999992677777546999999999999
Q ss_pred ------HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf ------23321000111122211111110001110001355677899998754201222101246888999987643100
Q gi|254780843|r 216 ------DHKRNHISFLKTLDILANPRFTMGAVCIFLYVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGR 289 (420)
Q Consensus 216 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (420)
.+++..++..-..+..+++.+.....................+.|. +...|.+..+.+..............
T Consensus 237 ~~~~f~~~~~r~~~Pll~l~Lfr~r~f~~~~~~~~~~~~~~~~~~fl~pl~l--Q~~~G~Sp~~aGl~llP~~~~~~~~~ 314 (471)
T PRK10504 237 ALVLYLLHARNNNRALFSLKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFL--QIGLGFSPFHAGLMMIPMVLGSMGMK 314 (471)
T ss_pred HHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999998189886498993631699999999999999999999999999--99659889999999999999999999
Q ss_pred CCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Q ss_conf 111111000000000124555545676899622----3368999999999999999999999999630156-56999999
Q gi|254780843|r 290 FIGTWILSRFSAEKTLCAFATTACSLVILSSYT----TGFISGWSLIAVGLFNSIMFPTIFSLASASLEDQ-ASGGSGII 364 (420)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 364 (420)
...++..||++.++................... ..+.......+.|++.+..++...+...+..|++ .+.+++..
T Consensus 315 ~~~g~l~~r~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~g~~l~~~~~~~~~~~~vp~~~~g~as~l~ 394 (471)
T PRK10504 315 RIVVQVVNRFGYRRVLVATTLGLALVSLLFMTVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLL 394 (471)
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHH
T ss_conf 99999988608358999999999999999998703454999999999999999999999999998639977416499999
Q ss_pred -HHHHHHHHHHHHHHHHHHHH
Q ss_conf -99999999999999999996
Q gi|254780843|r 365 -CTTISGGVIIPLGVGYLVDI 384 (420)
Q Consensus 365 -~~~~~g~~i~p~i~G~l~d~ 384 (420)
....+|+++|..+.|.+...
T Consensus 395 ~~~rqlg~slGvAv~g~~l~~ 415 (471)
T PRK10504 395 SMIMQLSMSIGVTIAGLLLGL 415 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999998
No 21
>TIGR00885 fucP L-fucose:H+ symporter permease; InterPro: IPR005275 This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by at least four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. .
Probab=100.00 E-value=1.5e-44 Score=239.64 Aligned_cols=395 Identities=29% Similarity=0.520 Sum_probs=327.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999998738998999999809998999999999999999999999999985262899999999764321
Q gi|254780843|r 11 CTKIYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGC 90 (420)
Q Consensus 11 ~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ 90 (420)
..++++..+|+++|+++++.+|++|.+++-+.+|++|.++++++|+.||...++|+|.+..|+..|--++.|+.++++|.
T Consensus 3 iPF~LitSlFaLWg~ANditnpmv~~Fq~~f~~~a~~aaLvQ~AFYgGYf~~aiPAa~f~~k~SYKAGillGL~LYA~GA 82 (427)
T TIGR00885 3 IPFVLITSLFALWGFANDITNPMVKAFQKVFELTAFEAALVQVAFYGGYFIMAIPAALFIKKLSYKAGILLGLALYALGA 82 (427)
T ss_pred CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 31699998999998875002157999998840655420266666762012356558999987346888999899999988
Q ss_pred HCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHH
Q ss_conf 00000013202467899988777567888765310000123035788776644311000034547888886412342046
Q gi|254780843|r 91 ILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPN 170 (420)
Q Consensus 91 ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~ 170 (420)
.++..|....+|..+++..++...|.++..+++++++....+++...+++++.+++++.|+.+|..++..++........
T Consensus 83 fLFwPAa~~~~y~~FLv~lfIlt~GL~fLET~aNPyil~mG~e~tatrRLNlAQsFNp~Gsi~g~~va~~lil~nl~~~~ 162 (427)
T TIGR00885 83 FLFWPAAEIEEYTLFLVGLFILTAGLGFLETAANPYILVMGDEETATRRLNLAQSFNPLGSIIGMVVAQQLILSNLESQS 162 (427)
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 86313775235127999999999626666424286376127888421022256302157899999999898863288766
Q ss_pred HHHH---------HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC-----HHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 7765---------5555778988864200112110013455554321012310-----1233210001111222111111
Q gi|254780843|r 171 TSML---------ADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSF-----ADHKRNHISFLKTLDILANPRF 236 (420)
Q Consensus 171 ~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 236 (420)
.... ...........+..+..++.................|-+. .++.++-+-.....+..+.++.
T Consensus 163 ~D~~Gnlif~~ls~~e~~aik~sdla~~~~PY~iig~vvlav~llI~l~K~Pa~qsDn~~~a~qisF~~~lsRla~~~~y 242 (427)
T TIGR00885 163 QDVLGNLIFDKLSEEELSAIKESDLASVRTPYLIIGLVVLAVLLLIRLTKMPALQSDNHEDAKQISFSASLSRLARKRKY 242 (427)
T ss_pred CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 42578789884297888886465576661238999999999999985413774225772003465505899999864246
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCCCHH----HHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHH
Q ss_conf 10001110001355677899998754201---2221012----4688899998764310011111100000000012455
Q gi|254780843|r 237 TMGAVCIFLYVGAEVAIGSIMANYLMRHD---TLHLDGI----SAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFA 309 (420)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
+....+.+++.+......+++..|..+.. ..|.++. ...............+|..+.++.+|+...+++...+
T Consensus 243 RegViAQffYVGvQi~CWtfii~Ya~rl~~~~~~G~~~~saevlsqqy~i~aMviF~isRFi~T~l~~yl~a~k~L~~~A 322 (427)
T TIGR00885 243 REGVIAQFFYVGVQIMCWTFIIQYAVRLIFGKTAGFAAKSAEVLSQQYNIVAMVIFIISRFIGTFLLKYLAAEKLLMLYA 322 (427)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_conf 89999999998789999999999765614784320013457888753456678777667889999998628658999999
Q ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----
Q ss_conf 5545676899622336899999999999999999999999963015656999999999999999999999999961----
Q gi|254780843|r 310 TTACSLVILSSYTTGFISGWSLIAVGLFNSIMFPTIFSLASASLEDQASGGSGIICTTISGGVIIPLGVGYLVDIA---- 385 (420)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~p~i~G~l~d~~---- 385 (420)
.......+...+..+.+..+++++...+++.++|++++.+.+..+++++-+++..+|+.+||++.||+.|.+.|..
T Consensus 323 i~g~~~~Lg~iF~~g~~GLycL~l~SafMsl~fPTIygialkglg~d~k~GaaglvMaI~GG~~~pPl~g~iiD~~E~~~ 402 (427)
T TIGR00885 323 IIGMLLILGSIFLDGVVGLYCLVLVSAFMSLMFPTIYGIALKGLGEDTKYGAAGLVMAIIGGGILPPLQGFIIDQKEVAA 402 (427)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHEEECHHHHHC
T ss_conf 99999999999980248999999997321032246899985146400001057899988610320101404223378603
Q ss_pred --HHHHHHHHHHHHHHHHHHHH
Q ss_conf --23799999999999999999
Q gi|254780843|r 386 --SLRDAMFVPAVCYIIIAIYG 405 (420)
Q Consensus 386 --g~~~~~~~~~~~~~~~~~~~ 405 (420)
..+.++++++.|++|+..|+
T Consensus 403 ~pavn~sfilPl~CF~VI~iyg 424 (427)
T TIGR00885 403 LPAVNVSFILPLLCFVVIIIYG 424 (427)
T ss_pred CCCCCHHHHHHHHHHHHHHHHC
T ss_conf 8886588998999998888630
No 22
>TIGR00893 2A0114 d-galactonate transporter; InterPro: IPR004744 D-galactonate transporters and other proteins that belong to the phthalate permease family are members of this group.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=100.00 E-value=3.5e-41 Score=222.72 Aligned_cols=373 Identities=14% Similarity=0.094 Sum_probs=281.1
Q ss_pred HHHHHHHHHHHH-HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHCCHHCC---CC
Q ss_conf 998738998999-99980999899999999999999999999999998526-28999999997643210000001---32
Q gi|254780843|r 25 GITSLNSILVPK-LQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYG-YIKGICTGLLIMSLGCILFTATI---EI 99 (420)
Q Consensus 25 ~~~~~~~~~~p~-l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G-rr~~l~~~~~~~~i~~ll~~~a~---~~ 99 (420)
.|+..++.+-|+ +|||||+|+.|.|++.|+|+++|.++++|.|++.||+| -|+++...+++|++.+.+.++.. ..
T Consensus 8 lDR~~~S~Aa~~Gl~~DLg~~~~~~g~~~saF~~gY~~~~~p~g~~Ldr~Gh~~~~~~~~~v~Wg~f~~~~af~~~Fs~~ 87 (427)
T TIGR00893 8 LDRANLSFAAPTGLQEDLGLSAAQYGYVFSAFSIGYVLGQFPGGLLLDRIGHARKTLAVAIVLWGVFTLLQAFAGGFSTV 87 (427)
T ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98989999998666876088776888999999999999966689887521158999999999999999999755654467
Q ss_pred CHHHHHHHHHHHHHHH--HHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC-----CCHHHH
Q ss_conf 0246789998877756--788876531000012303578877664431100003454788888641234-----204677
Q gi|254780843|r 100 TTFKVFLIALCILAIG--VVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNL-----ASPNTS 172 (420)
Q Consensus 100 ~~~~~~~~~~~i~g~g--~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~-----~~~~~~ 172 (420)
..+..++..|++.|.+ ++...|+...++++|+|++||+++.+...++..+|..+++.+.+.+..... +|...+
T Consensus 88 ~~~~~l~~lR~l~G~aGLEa~~~Pg~~~~~~~WFP~~eR~~~~s~f~~~~~lg~~~~~Pl~~~i~~~~~~~g~~gW~~~F 167 (427)
T TIGR00893 88 TAYVSLYILRVLLGAAGLEAPLFPGIIKIVASWFPAKERATAVSIFNSAQYLGGIIGGPLVGWILVHFSSMGMKGWQWVF 167 (427)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
T ss_conf 68999999999985656777751368998730046557577999999999999999989999999874466520138999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC-----CCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 655555778988864200112110013455554321012-----310123321000111122211111110001110001
Q gi|254780843|r 173 MLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQR-----NSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYV 247 (420)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (420)
.............+................+++....+. ++..++++.+.+..+..+..++++.+......++..
T Consensus 168 ~~~G~~~~~~gv~~~~~~~d~p~~a~~~~~e~~~~~~~~~~~~~~~~~~k~~~~~k~~~~~~~L~~r~~~~~~~~~~~~~ 247 (427)
T TIGR00893 168 IIEGILGIILGVLWLKFIKDKPQKAKWLTEEEKYIVVGGLLAEQDDSKGKGPSEPKKYQIKELLKDRRVWGLALGQFLVN 247 (427)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHH
T ss_conf 99979999999999986079754766454899987640342000033456787760899999981559989999999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCC----HHHHHHHHHHHH-----HH-
Q ss_conf 35567789999875420122210124688899998764310011111100000000----012455554567-----68-
Q gi|254780843|r 248 GAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEK----TLCAFATTACSL-----VI- 317 (420)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-----~~- 317 (420)
........|.|.|..+. .+.+..+.+.+.....+...++....+..+|...+|+ .-+.......+. ..
T Consensus 248 ~~~~~f~~W~P~yl~~~--~g~~~l~~g~~~~~P~~~g~~G~~L~g~~SD~~~~r~~~fW~~l~~a~~~~~~~~~~~s~~ 325 (427)
T TIGR00893 248 ILLYFFLTWFPTYLKQE--RGLSILEAGFLASLPGIVGFVGMVLGGILSDLLLRRGARFWKSLVFARKTAIIAGLVLSLL 325 (427)
T ss_pred HHHHHHHHHHHHHHHHH--HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98899999999998653--1458999999999999999999999998678876235413566789999999999999999
Q ss_pred --HHH-HCC--HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHH-HHHHHHHHHHHHHHHHHHH-H
Q ss_conf --996-223--3689999999999-999999999999996301565699--9999999-9999999999999999612-3
Q gi|254780843|r 318 --LSS-YTT--GFISGWSLIAVGL-FNSIMFPTIFSLASASLEDQASGG--SGIICTT-ISGGVIIPLGVGYLVDIAS-L 387 (420)
Q Consensus 318 --~~~-~~~--~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~g~~i~p~i~G~l~d~~g-~ 387 (420)
... ... .....+....+.+ +.....+..++...+..|++.... +.+...+ .+|+.++|.+.|++.|.+| .
T Consensus 326 ~~~~~~~~~Gm~~~~~~~~~~l~~fg~~~l~~~~w~~~s~~~~~~~~g~~~G~i~~~GY~~~~i~~P~~~G~~~~~~G~f 405 (427)
T TIGR00893 326 MFATNSLVNGMPPWAALALVALAFFGAGLLGAILWAVISDVLPGNIAGLTGGLINSLGYNLGGIVGPIVIGYIAATTGSF 405 (427)
T ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
T ss_conf 99861031017999999999999999999887665540310575124568899999999899999999997763266623
Q ss_pred HHHHHHHHHHHH
Q ss_conf 799999999999
Q gi|254780843|r 388 RDAMFVPAVCYI 399 (420)
Q Consensus 388 ~~~~~~~~~~~~ 399 (420)
...+.+.+....
T Consensus 406 ~~~~~~~~~~~~ 417 (427)
T TIGR00893 406 AGALLVVAALAL 417 (427)
T ss_pred HHHHHHHHHHHH
T ss_conf 899999999999
No 23
>PRK10054 putative MFS-type transporter YdeE; Provisional
Probab=100.00 E-value=4.4e-39 Score=212.20 Aligned_cols=387 Identities=10% Similarity=0.076 Sum_probs=250.6
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
Q ss_conf 97531120059999999999999999873899899-99998099989999999999999999999999999852628999
Q gi|254780843|r 1 MKDTIARNIQCTKIYIFILFFLFGGITSLNSILVP-KLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGI 79 (420)
Q Consensus 1 m~~~~~k~~~~~~i~i~~~ff~~g~~~~~~~~~~p-~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l 79 (420)
||.|+.|.... +..--|+..+.+++.-|++. ++.+++|+|.+++|++.++..+...++++++|+++||+||||++
T Consensus 1 ~~~~~~~~~~~----Ll~~~~l~~~g~~~~~Pfl~iYl~~~~gls~~~vG~il~~~~~~~~~~~l~gG~L~DR~Grk~v~ 76 (395)
T PRK10054 1 MNLSLRRSTSA----LLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYM 76 (395)
T ss_pred CCHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 97648888899----99999999999999999999999986299889999999999999999885201446632844999
Q ss_pred HHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
Q ss_conf 99999764321000000132024678999887775678887653100001230357887766443110000345478888
Q gi|254780843|r 80 CTGLLIMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGS 159 (420)
Q Consensus 80 ~~~~~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 159 (420)
+.+.++.+++...+.++ ++++.+.....+.|.+.+...|+..+++.|..++++|.+..++.....++|..+||.+++
T Consensus 77 l~g~~~~a~~~~~l~~~---~~~~~~~l~~~l~g~~~~~~~pa~~A~iaD~~~~~~R~~~f~l~y~~~NlG~aiGpllGg 153 (395)
T PRK10054 77 LLAITAFASGFIAIPLV---NNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGT 153 (395)
T ss_pred HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999---889999999999999999899999999984388778989999999999999999999999
Q ss_pred HHHHCCCCCHHHHHHHHHHHHH-HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 8641234204677655555778-988864200112110013455554321012310123321000111122211111110
Q gi|254780843|r 160 VLMLGNLASPNTSMLADTMKDY-QTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTM 238 (420)
Q Consensus 160 ~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (420)
.+....... .+......... ........ ++ .+.+. ++++....+.+...+++....
T Consensus 154 ~l~~~~~~~--~F~~~a~~~~~~~~~i~~~~-----------------~~-~~~~~---~~~~~~~~~~~~~l~dr~~~~ 210 (395)
T PRK10054 154 LLVMQSINL--PFWLAAICSAFPLVFIQIWV-----------------KR-SEKAI---ATETASVWSPKVLLRDKALLW 210 (395)
T ss_pred HHHHHCCCH--HHHHHHHHHHHHHHHHHHHH-----------------HC-CCCCC---CCCCCCCCCCHHHHCCCCHHH
T ss_conf 999965118--99999999999999999997-----------------14-56664---455566677315522501799
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 00111000135567789999875420122210124688899998764310011111100000000012455554567689
Q gi|254780843|r 239 GAVCIFLYVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVIL 318 (420)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (420)
...................+.|.......+.+....+..........+.......+..+|.+.++....+..........
T Consensus 211 ~~~~~~l~~~~~~q~~~~l~~~~~~~~~~~~~~~~~~~l~~~N~v~Vv~lq~~v~r~~~~~~~~~~l~~G~ll~~~g~~~ 290 (395)
T PRK10054 211 FTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVG 290 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999988999998114650989999999999999998999999985168159999999999999999
Q ss_pred HHHC-CH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9622-33-689999999999999999999999996301565-69999999999999999999999999612379999999
Q gi|254780843|r 319 SSYT-TG-FISGWSLIAVGLFNSIMFPTIFSLASASLEDQA-SGGSGIICTTISGGVIIPLGVGYLVDIASLRDAMFVPA 395 (420)
Q Consensus 319 ~~~~-~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~i~p~i~G~l~d~~g~~~~~~~~~ 395 (420)
.... +. +...+......++.....|...+...+..|++. ++..+....+.+|.+++|.+.|.+.|+.+....|.+++
T Consensus 291 ~~~~~~~~~~~~i~~~ifTiGE~i~~P~~~~~v~~laP~~~RG~Y~g~~sl~~lG~~igP~~gG~ll~~~~~~~~f~~~~ 370 (395)
T PRK10054 291 FIFSGNNLLFWGMSAAVFTVGEIIYAPGEYMLIDNIAPPGMKASYFSAQSLGWLGAAVNPLVSGVILTTLPPWSLFVILA 370 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_conf 99987789999999999999999986559999987399340325898999999999999999999998726669999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 99999999999853111020127
Q gi|254780843|r 396 VCYIIIAIYGIYCCYKENNFEQN 418 (420)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~ 418 (420)
++.++..++.....| ++.++|+
T Consensus 371 ~~~~~~~l~~~~g~~-~~~~~~~ 392 (395)
T PRK10054 371 LAIVAAWLLMLKGMR-ARPWGQP 392 (395)
T ss_pred HHHHHHHHHHHCCCC-CCCCCCC
T ss_conf 999999999972667-8864578
No 24
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.9e-39 Score=214.05 Aligned_cols=386 Identities=12% Similarity=0.065 Sum_probs=289.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
Q ss_conf 53112005999999999999999987389989999998099989999999999999999999999999852628999999
Q gi|254780843|r 3 DTIARNIQCTKIYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTG 82 (420)
Q Consensus 3 ~~~~k~~~~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~ 82 (420)
++-.|+.+...+.+..+-|..|....+...++|++.+|||+|..++|+..|.|.+++.+++|+...+.||+.||++++..
T Consensus 5 ~~~~~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~ 84 (394)
T COG2814 5 ATARKPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGL 84 (394)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf 32333633899999999999884788688222889988399888999999999999999889999987133538999999
Q ss_pred HHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 99764321000000132024678999887775678887653100001230357887766443110000345478888864
Q gi|254780843|r 83 LLIMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLM 162 (420)
Q Consensus 83 ~~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 162 (420)
+.++.++++++.++ +||+.+.+.|++.|...+...+.......+..|+++|+++++....+..+..+.|..++.++.
T Consensus 85 l~lFi~~n~l~alA---p~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig 161 (394)
T COG2814 85 LALFIVSNLLSALA---PSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLG 161 (394)
T ss_pred HHHHHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_conf 99999998999995---319999999999998889999999999998759521245999999779999998512899999
Q ss_pred HCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 12342046776555557789888642001121100134555543210123101233210001111222111111100011
Q gi|254780843|r 163 LGNLASPNTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVC 242 (420)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (420)
+..+|+..+..............+...+ +.+.+++.+....+..+..+++..+.....
T Consensus 162 ~~~GWR~~F~~ia~l~ll~~~~~~~~lP----------------------~~~~~~~~~~~~~~~~~~l~~p~v~~~l~~ 219 (394)
T COG2814 162 QLFGWRATFLAIAVLALLALLLLWKLLP----------------------PSEISGSLPGPLRTLLRLLRRPGVLLGLLA 219 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCC----------------------CCCCCCCCCCCHHHHHHHHCCCHHHHHHHH
T ss_conf 8863899999999999999999999699----------------------966778777644679989668458999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 10001355677899998754201222101246888999987643100111111000000000124555545676899622
Q gi|254780843|r 243 IFLYVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYT 322 (420)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (420)
..+.....+..+.|+..+..+. .+.+..........+......+...+++..|| +.++...................
T Consensus 220 t~l~~~g~F~~ftYi~P~L~~v--~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~ 296 (394)
T COG2814 220 TFLFMTGHFALYTYIRPFLESV--AGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFT 296 (394)
T ss_pred HHHHHCCHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999816244489579999873--59987688999999989999987777640202-10669999999999999999983
Q ss_pred -CHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf -336-89999999999999999999999996301565699999999-999999999999999996123799999999999
Q gi|254780843|r 323 -TGF-ISGWSLIAVGLFNSIMFPTIFSLASASLEDQASGGSGIICT-TISGGVIIPLGVGYLVDIASLRDAMFVPAVCYI 399 (420)
Q Consensus 323 -~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~i~p~i~G~l~d~~g~~~~~~~~~~~~~ 399 (420)
... .......+.++..............+..|+....+++.+.. .++|.++|..+.|.+.|+.|+....++.++..+
T Consensus 297 ~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~ 376 (394)
T COG2814 297 GASPALALALLFLWGFAFSPALQGLQTRLARLAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLL 376 (394)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_conf 11199999999999998630156788875024777437999999999999999999998999981035778999999999
Q ss_pred HHHHHHHHHHHHHHCCC
Q ss_conf 99999998531110201
Q gi|254780843|r 400 IIAIYGIYCCYKENNFE 416 (420)
Q Consensus 400 ~~~~~~~~~~~~~~~~~ 416 (420)
......+...+++++.+
T Consensus 377 ~a~~~~~~~~~~~~~~~ 393 (394)
T COG2814 377 LALLLALLSARKDRRTA 393 (394)
T ss_pred HHHHHHHHHHHCCCCCC
T ss_conf 99999999874014468
No 25
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=100.00 E-value=1.3e-39 Score=214.81 Aligned_cols=374 Identities=13% Similarity=0.046 Sum_probs=240.2
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCH
Q ss_conf 99999999999873899899-99998099989999999999999999999999999852628999999997643210000
Q gi|254780843|r 16 IFILFFLFGGITSLNSILVP-KLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFT 94 (420)
Q Consensus 16 i~~~ff~~g~~~~~~~~~~p-~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~ 94 (420)
+..--++.....+++-|++| ++.+++|.|..++|++.+.+.+...+.++++|+++||+|||++++.|+.+.+++.++++
T Consensus 15 L~~~~~l~~lG~~mv~Pfl~iyl~~~lg~s~~~iGlil~~~~l~~~~~~~~~G~LsDR~GrK~vii~gl~~~a~~~~~~a 94 (400)
T PRK11646 15 LLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMG 94 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999860799889999999999999999986146888861881999999999999999999
Q ss_pred HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHH
Q ss_conf 00132024678999887775678887653100001230357887766443110000345478888864123420467765
Q gi|254780843|r 95 ATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSML 174 (420)
Q Consensus 95 ~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~ 174 (420)
++ ++.+.+.+.|.+.|++.+...|+..+++.|..++++|.+.+++.....++|..+||.+++.+...... .....
T Consensus 95 ~a---~s~~~l~~~~~l~G~g~~~~~pa~~Aliad~t~~~~R~~~f~l~~~a~niG~~iGpllGg~l~~~~~~--~~f~~ 169 (400)
T PRK11646 95 IA---HEPWLLWFSCILSGLGGTLFDPPRSALVIKLIRPQQRGRFFSLLMMQDSAGAVIGALLGSWLLQYDFR--LVCAT 169 (400)
T ss_pred HH---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHH
T ss_conf 97---35999999999999985646799999999708876899999999999999999999999999986489--99999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 55557789888642001121100134555543210123101233210001111222111111100011100013556778
Q gi|254780843|r 175 ADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYVGAEVAIG 254 (420)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (420)
.............. .. + +.+.++ ++....++.++..+++....................
T Consensus 170 ~a~~~~l~~~~~~~-~~---------------p--~~~~~~---~~~~~~~~~~~vl~dr~f~~~~l~~~~~~~~~~q~~ 228 (400)
T PRK11646 170 GAVLFVLAAAFNAW-LL---------------P--AYKLST---VRTPVREGMTRVLRDKRFVTYVLTLAGYYMLAVQVM 228 (400)
T ss_pred HHHHHHHHHHHHHH-HC---------------C--CCCCCC---CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999-57---------------8--666666---676367789999726889999999999999999999
Q ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHHH-HHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCC-HHHHHHHHH
Q ss_conf 9999875420122210124688899998-76431001111110000000001245555456768996223-368999999
Q gi|254780843|r 255 SIMANYLMRHDTLHLDGISAGQHTAIYW-GSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYTT-GFISGWSLI 332 (420)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 332 (420)
...+.+..+ .+.+....+....... ...........+..+|.+.+........+...........+ .........
T Consensus 229 ~~lpl~~~~---~~~~~~~~g~l~~~~~~v~v~lq~pl~~~~~kr~~~~~~l~~G~~l~~~g~~~~~~~~~~~~~~i~~~ 305 (400)
T PRK11646 229 LMLPIMVND---IAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLIC 305 (400)
T ss_pred HHHHHHHHH---HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999998---55878999999999999999999999999998547299999999999999999999988999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999630156-5699999999-99999999999999999612---379999999999999999998
Q gi|254780843|r 333 AVGLFNSIMFPTIFSLASASLEDQ-ASGGSGIICT-TISGGVIIPLGVGYLVDIAS---LRDAMFVPAVCYIIIAIYGIY 407 (420)
Q Consensus 333 ~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~g~~i~p~i~G~l~d~~g---~~~~~~~~~~~~~~~~~~~~~ 407 (420)
+..++.....|...+...+..|++ ++..-+.... ..+|.++||.+.|++.|... .....|+....+.+++..++.
T Consensus 306 lftiGe~l~~P~~~s~va~lap~~~rG~y~G~~~~~~~lG~~~Gp~~gG~L~d~~~~~~~p~~~W~~~~~~~~l~~~~l~ 385 (400)
T PRK11646 306 LFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALHQPELPWMMLGIIGIITLLALG 385 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99999999975489999983896543237629999999999988989999995530248985799999999999999999
Q ss_pred HHHHHHCCCCC
Q ss_conf 53111020127
Q gi|254780843|r 408 CCYKENNFEQN 418 (420)
Q Consensus 408 ~~~~~~~~~~~ 418 (420)
...++||..+.
T Consensus 386 ~~~~~~~~~~~ 396 (400)
T PRK11646 386 WQFSQKRIARR 396 (400)
T ss_pred HHHHHHHHHHH
T ss_conf 99989999865
No 26
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=100.00 E-value=8e-38 Score=205.90 Aligned_cols=344 Identities=21% Similarity=0.242 Sum_probs=256.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999999998738998999999809998999999999999999999999999985262899999999764321000
Q gi|254780843|r 14 IYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILF 93 (420)
Q Consensus 14 i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~ 93 (420)
..+...+|+.+++....++++|.+++|+|.|+.|+|++.+++.+++.+++++.|+++||+||||++..+.+++.++.+.+
T Consensus 2 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~D~~grk~~~~~~~~~~~i~~i~~ 81 (352)
T cd06174 2 LLLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLL 81 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999979399999999999999999999999999998096999999999999999999
Q ss_pred HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHH
Q ss_conf 00013202467899988777567888765310000123035788776644311000034547888886412342046776
Q gi|254780843|r 94 TATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSM 173 (420)
Q Consensus 94 ~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~ 173 (420)
..+ ++++.+...|++.|.+.+...+....+..|+.++++|++..+........|..+++.+++.+.+...+......
T Consensus 82 ~~~---~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~ig~~i~~~l~~~~~~~~~~~~ 158 (352)
T cd06174 82 AFA---SSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLI 158 (352)
T ss_pred HHH---CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_conf 976---32999999999986221001079999986048999999999998988756789999999999986448999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 55555778988864200112110013455554321012310123321000111122211111110001110001355677
Q gi|254780843|r 174 LADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYVGAEVAI 253 (420)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (420)
. ............... +..+................
T Consensus 159 ~-~~~~~~~~i~~~~~~-------------------------------------------~~~~~~~~~~~~~~~~~~~~ 194 (352)
T cd06174 159 L-AILGLLLALLLLFLL-------------------------------------------RLLLLLALAFFLLSFGYYGL 194 (352)
T ss_pred H-HHHHHHHHHHHHHHH-------------------------------------------HHHHHHHHHHHHHHHHHHHH
T ss_conf 9-999999999999999-------------------------------------------99999999999999999999
Q ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHH-HHHHHHHHHHHHHHH-CCHHHHHHHH
Q ss_conf 89999875420122210124688899998764310011111100000000012-455554567689962-2336899999
Q gi|254780843|r 254 GSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLC-AFATTACSLVILSSY-TTGFISGWSL 331 (420)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~ 331 (420)
..+.+.+.... .+.+....+............+....+...||.++++... ............... .+........
T Consensus 195 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (352)
T cd06174 195 LTYLPLYLQEV--LGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVAL 272 (352)
T ss_pred HHHHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999982--4898777778889999999999999999999827389999999999999999999886599999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999630156-569999-99999999999999999999961237999999999999999999
Q gi|254780843|r 332 IAVGLFNSIMFPTIFSLASASLEDQ-ASGGSG-IICTTISGGVIIPLGVGYLVDIASLRDAMFVPAVCYIIIAIYGI 406 (420)
Q Consensus 332 ~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~g~~i~p~i~G~l~d~~g~~~~~~~~~~~~~~~~~~~~ 406 (420)
.+.+.+.+...+.......+..|++ ++...+ ......+|+.++|++.|.+.|..|++..+++.+++..+..++..
T Consensus 273 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~i~g~i~~~~g~~~~~~i~~~~~~i~~i~~~ 349 (352)
T cd06174 273 LLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999879607999999999999999999999999999987899999999999999999999
No 27
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=4.7e-38 Score=207.08 Aligned_cols=371 Identities=15% Similarity=0.069 Sum_probs=277.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
Q ss_conf 53112005999999999999999987389989999998099989999999999999999999999999852628999999
Q gi|254780843|r 3 DTIARNIQCTKIYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTG 82 (420)
Q Consensus 3 ~~~~k~~~~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~ 82 (420)
|..+|..+...+.+.+.-|..+....+..-++|++.+|||.|..++|++.|.|.+++.+++|+...+.||++||++++..
T Consensus 12 ~~~~~~~W~av~~La~~~F~~~ttEf~~~GlLp~iA~dl~Vs~~~aG~lVT~yAl~~ai~aP~l~~lt~r~~Rr~lLl~~ 91 (394)
T PRK10213 12 DAITRPNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILF 91 (394)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf 76564556999999999999998999999743989967799978999999999999999889999986678838999999
Q ss_pred HHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 99764321000000132024678999887775678887653100001230357887766443110000345478888864
Q gi|254780843|r 83 LLIMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLM 162 (420)
Q Consensus 83 ~~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 162 (420)
+.++.+++++.+++ ++|+.+...|++.|...+...+....+..+..|+++|+++++....+..++.+.|..++..+.
T Consensus 92 l~~f~~~n~l~Ala---~~f~~Ll~~R~l~g~~~g~f~~~a~~~a~~lvp~~~~grAiaiv~~G~s~A~v~GvPlgt~ig 168 (394)
T PRK10213 92 AVLLTLSCLLVSFA---NSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLG 168 (394)
T ss_pred HHHHHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_conf 99999999999994---879999999999982547899999999999769302236999998899999998210898886
Q ss_pred HCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 12342046776555557789888642001121100134555543210123101233210001111222111111100011
Q gi|254780843|r 163 LGNLASPNTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVC 242 (420)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (420)
+..+|+..+..............+... + ..+. ++....++..+..+++..+.....
T Consensus 169 ~~~GWR~~F~~ia~l~~i~~~~~~~~l--P---------------~~~~-------~~~~~~~~~~~~l~~~~v~~~l~~ 224 (394)
T PRK10213 169 ELIGWRNVFNAAAVMGVLCIFWIIKSL--P---------------SLPG-------EPSHQKQNTFRLLQRPGVMAGMIA 224 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHC--C---------------CCCC-------CCCCCHHHHHHHHCCHHHHHHHHH
T ss_conf 001399999999999999999999837--7---------------7888-------887565789999567899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 10001355677899998754201222101246888999987643100111111000000000124555545676899622
Q gi|254780843|r 243 IFLYVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYT 322 (420)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (420)
..+.....+..++|...+..+. .+.+..........+......+....++..||..+..+.............+....
T Consensus 225 ~~l~~~g~f~~yTYi~p~l~~~--~g~~~~~is~~L~~fGi~~~~Gn~l~G~l~dr~~~~~l~~~~~~l~~~~~~l~~~~ 302 (394)
T PRK10213 225 IFMSFAGQFAFFTYIRPVYMNL--AGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPLVLALSALVLTLWG 302 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999899679999984--18986489999999999999999999999631087899999999999999999987
Q ss_pred CHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 336-89999999999999999999999996301565699999999-9999999999999999961237999999999999
Q gi|254780843|r 323 TGF-ISGWSLIAVGLFNSIMFPTIFSLASASLEDQASGGSGIICT-TISGGVIIPLGVGYLVDIASLRDAMFVPAVCYII 400 (420)
Q Consensus 323 ~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~i~p~i~G~l~d~~g~~~~~~~~~~~~~~ 400 (420)
... .......+.|+..+...+.......+..|+....+++.+.. .++|.++|+.+.|.+.|+.|.....++..+..++
T Consensus 303 ~~~~~~~~~~~lwG~~~~~~~~~~q~~i~~~a~~a~~~a~al~~safnlgia~Ga~iGG~~l~~~G~~~~~~~~~~~~~~ 382 (394)
T PRK10213 303 SDKIVATGVAIIWGLTFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLL 382 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf 45999999999999999988999999999878686769999999999999999999999999765713789999999999
Q ss_pred HH
Q ss_conf 99
Q gi|254780843|r 401 IA 402 (420)
Q Consensus 401 ~~ 402 (420)
..
T Consensus 383 ~~ 384 (394)
T PRK10213 383 TA 384 (394)
T ss_pred HH
T ss_conf 99
No 28
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=2.1e-37 Score=203.80 Aligned_cols=373 Identities=13% Similarity=0.049 Sum_probs=276.0
Q ss_pred HHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
Q ss_conf 0599999999999999998----738998999999809998999999999999999999999999985262899999999
Q gi|254780843|r 9 IQCTKIYIFILFFLFGGIT----SLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLL 84 (420)
Q Consensus 9 ~~~~~i~i~~~ff~~g~~~----~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~ 84 (420)
-++.+.++....++.+++. ..++|++|++++|+|+|.+|+|++.+...+.+.+.+++.++++||+|.||++..+++
T Consensus 3 ~~~~~~l~l~~i~lva~nLR~~itsv~Pll~~I~~dl~ls~~~~GlLttlP~l~fgl~s~~a~~larR~G~~r~l~~al~ 82 (393)
T PRK09705 3 SKFPLNFMLLVLVLIGLNMRPLLTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLL 82 (393)
T ss_pred CHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_conf 71679999999999997051454130521999998819988899999999999999998878999998680889999999
Q ss_pred HHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
Q ss_conf 76432100000013202467899988777567888765310000123035788776644311000034547888886412
Q gi|254780843|r 85 IMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLG 164 (420)
Q Consensus 85 ~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 164 (420)
+..+|..+-... ++...+.....+.|.|.+..++....++.+++| +|.+..++.+......|..++..+...+.+.
T Consensus 83 ll~~G~~lR~~~---~~~~~ll~gt~l~G~GIai~nvllP~~vk~~fP-~r~g~~tglY~~~m~~ga~l~~~l~~~l~~~ 158 (393)
T PRK09705 83 LIAVGALMRELY---PQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQH 158 (393)
T ss_pred HHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999843---438999999999998998864410999997723-2058999999999999999999999999987
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 34204677655555778988864200112110013455554321012310123321000111122211111110001110
Q gi|254780843|r 165 NLASPNTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIF 244 (420)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (420)
..+|+.....+..........|.... + +.+...+ +......+..+++..|.......
T Consensus 159 ~~~Wr~al~~wai~allal~~w~~~~-----------------~--~~~~~~~----~~~~~~~~~~rs~~aW~l~~ffg 215 (393)
T PRK09705 159 SETWYQTLAWWALPAVVALFAWWWQS-----------------A--REVASSH----KTTTTPVRVVFTPRAWTLGVYFG 215 (393)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHH-----------------C--CCCCCCC----CCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 27789999999999999999999971-----------------5--7877788----88877644113807999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCH
Q ss_conf 00135567789999875420122210124688899998764310011111100000000012455554567689962233
Q gi|254780843|r 245 LYVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYTTG 324 (420)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (420)
.....++....|++.+..+ .|.+....+...+.+......+........++.+++....................+.
T Consensus 216 lqS~~~Y~~~aWLP~il~~---~G~s~~~AG~lls~~~~~~~~~~l~~P~la~~~~~~~~l~~~~~~~~ig~~gl~~~p~ 292 (393)
T PRK09705 216 LINGGYASLIAWLPAFYIE---IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPL 292 (393)
T ss_pred HHHHHHHHHHHHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999998---6999999999999999999999999999973467404999999999999999999887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Q ss_conf 689999999999999999999999996301--5656999999-9999999999999999999612-37999999999999
Q gi|254780843|r 325 FISGWSLIAVGLFNSIMFPTIFSLASASLE--DQASGGSGII-CTTISGGVIIPLGVGYLVDIAS-LRDAMFVPAVCYII 400 (420)
Q Consensus 325 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~g~~i~p~i~G~l~d~~g-~~~~~~~~~~~~~~ 400 (420)
....+...++|++.+..+|........... +.+...++.. ..++..++++|.+.|.+.|.+| ++.++.+..++.++
T Consensus 293 ~~~~~~~~l~Gig~G~~F~lal~l~~~rt~~~~~a~~LSg~~Q~vGYllAalgP~~~G~l~d~tg~w~~~~~~l~~~~l~ 372 (393)
T PRK09705 293 QLPVLWAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVG 372 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf 79999999999987789999999998736998899999999999989999999999999999829958999999999999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999985311
Q gi|254780843|r 401 IAIYGIYCCYK 411 (420)
Q Consensus 401 ~~~~~~~~~~~ 411 (420)
..+.++....+
T Consensus 373 ~~v~~~~~~p~ 383 (393)
T PRK09705 373 LMIITLRFAPA 383 (393)
T ss_pred HHHHHHHCCCC
T ss_conf 99999735940
No 29
>pfam00083 Sugar_tr Sugar (and other) transporter.
Probab=100.00 E-value=5.7e-38 Score=206.65 Aligned_cols=393 Identities=13% Similarity=0.055 Sum_probs=224.5
Q ss_pred HHHHHHHHHHHHHHHHHH--HHHHHHHHC---------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
Q ss_conf 999999999998738998--999999809---------998999999999999999999999999985262899999999
Q gi|254780843|r 16 IFILFFLFGGITSLNSIL--VPKLQNSFS---------LTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLL 84 (420)
Q Consensus 16 i~~~ff~~g~~~~~~~~~--~p~l~~~~~---------~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~ 84 (420)
..+-+++.|++...++.. .|..+++++ +|..+.|++.|++++|++++++.+|+++||+|||++++.+.+
T Consensus 5 ~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~s~~~iG~~iG~~~~G~l~Dr~GRk~~l~~~~~ 84 (449)
T pfam00083 5 AALGGFLFGYDTGVIGAFLTLIKFFKRFGALTSIGACAASTVLSGLIVSIFSVGCLIGSLFAGKLGDRFGRKKSLLIGNV 84 (449)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_conf 26878999898989999997499999739877777778879899999999999999999999999874077999999999
Q ss_pred HHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
Q ss_conf 76432100000013202467899988777567888765310000123035788776644311000034547888886412
Q gi|254780843|r 85 IMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLG 164 (420)
Q Consensus 85 ~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 164 (420)
++.+++++.+++.. .+++.+.+.|++.|++.+...+....++.|+.|+++|++..+..+.....|..+++.++..+...
T Consensus 85 ~~~i~~~l~~~a~~-~~~~~l~i~R~l~G~~~G~~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~ 163 (449)
T pfam00083 85 LFVIGALLQGFAKG-KSFYMLIVGRVIVGLGVGGISVLVPMYISEIAPKKLRGALGSLYQLGITFGILVAAIIGLGLNKY 163 (449)
T ss_pred HHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999998675-73999999999999999999999999999868873446878988788889999999999999514
Q ss_pred CC--CCHHHHHHHHHHHHHHHHHHHHHCCCCCCC---HHHHHHHHHHHHCC--CCCCH--------HHHHHHCCCCCCCC
Q ss_conf 34--204677655555778988864200112110---01345555432101--23101--------23321000111122
Q gi|254780843|r 165 NL--ASPNTSMLADTMKDYQTDTARVISQMYLVL---AIILFLATWLCWMQ--RNSFA--------DHKRNHISFLKTLD 229 (420)
Q Consensus 165 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~--~~~~~--------~~~~~~~~~~~~~~ 229 (420)
.. .|+...................+....... ...........+.. +.+++ .+++.+........
T Consensus 164 ~~~~~Wr~~~~i~~~~~~l~~~~~~~lpESPr~l~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (449)
T pfam00083 164 SNSDGWRIPLGLQFVPAILLLIGLLFLPESPRWLVLKGKLEEARAVLAKLRGVSDVDQEIQEEKDSLERSVEAEKASWLE 243 (449)
T ss_pred CCCCCHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHH
T ss_conf 88643000111421648764210137899868999848599999999998288854288999999999987530210688
Q ss_pred CCCCCCCCCCHHH-H---HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHH
Q ss_conf 2111111100011-1---00013556778999987542012221012468889999876431001111110000000001
Q gi|254780843|r 230 ILANPRFTMGAVC-I---FLYVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTL 305 (420)
Q Consensus 230 ~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (420)
..+.+........ . ............+......... +.+... ............+........||.+||+..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~i~~~~~~~~~~~~~~l~d~~GRr~~~ 319 (449)
T pfam00083 244 LFRGKTVRQRLLMGVMLQIFQQLTGINAIFYYSPTIFETL--GLSDSL--LVTIIVGVVNFVFTFIAIFLVDRFGRRPLL 319 (449)
T ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCHHH--HHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
T ss_conf 8627205799999999999987675779998789999984--997689--999999999999998788875460869999
Q ss_pred HHHHHHHHHHHHHHHHC------CHH---HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHH
Q ss_conf 24555545676899622------336---89999999999999-999999999996301565699--9999999999999
Q gi|254780843|r 306 CAFATTACSLVILSSYT------TGF---ISGWSLIAVGLFNS-IMFPTIFSLASASLEDQASGG--SGIICTTISGGVI 373 (420)
Q Consensus 306 ~~~~~~~~~~~~~~~~~------~~~---~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~i 373 (420)
........+........ ... .......+...+.+ ...|..+....|..|.+.+.. +.....+.+|+.+
T Consensus 320 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~lg~~v 399 (449)
T pfam00083 320 LLGAAGMAICFLVLGVALLGVAKSKGAGIVAIVFILLFIAFFALGWGPVPWVIVSELFPLGVRPKAMAIATAANWLANFL 399 (449)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999985346612699999999999999997788999999786375869999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 99999999996123799999999999999999985311102
Q gi|254780843|r 374 IPLGVGYLVDIASLRDAMFVPAVCYIIIAIYGIYCCYKENN 414 (420)
Q Consensus 374 ~p~i~G~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (420)
+|.+.+.+.|..+.. .+++.+.+.++..++..+..++.|+
T Consensus 400 ~~~~~~~l~~~~~~~-~~~i~~~~~~~~~i~~~~~~PETkg 439 (449)
T pfam00083 400 IGFLFPIITGAIGGY-VFLVFAGLLVLFILFVFFFVPETKG 439 (449)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHEEEECCCC
T ss_conf 999999999987298-9999999999999997505423999
No 30
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.6e-40 Score=217.16 Aligned_cols=384 Identities=12% Similarity=0.072 Sum_probs=269.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCCC
Q ss_conf 99999998738998999999809998999999999999999999999999985262899999999764321000000132
Q gi|254780843|r 20 FFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATIEI 99 (420)
Q Consensus 20 ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~~ 99 (420)
+..+-+.+...+.+.|.++||.++|.+|.|++.|++++.|.++....|.++||.++|+.+..|+++.++..++++++
T Consensus 38 Ya~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs--- 114 (448)
T COG2271 38 YAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFS--- 114 (448)
T ss_pred HHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHH---
T ss_conf 99999999767630677887459898999999999999999988876652146787544258799999999998621---
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH--HHHHHCCCCCHHHHHHHHH
Q ss_conf 02467899988777567888765310000123035788776644311000034547888--8864123420467765555
Q gi|254780843|r 100 TTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIG--SVLMLGNLASPNTSMLADT 177 (420)
Q Consensus 100 ~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~--~~l~~~~~~~~~~~~~~~~ 177 (420)
++++.+.++.++.|..++...|.+...+..|+++++|++..++++...++|..+.|.+. +.+.... +|+........
T Consensus 115 ~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~-~w~~~f~~pgi 193 (448)
T COG2271 115 PSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHG-GWRAAFYFPGI 193 (448)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEEEHHHHHCCCCHHHHHHHHHHHHHCC-CHHHHHHHHHH
T ss_conf 79999999999989885279837786899875854567468874544422350579999999997542-56567788789
Q ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHH---HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 577898886420011211001345555432101231012332---10001111222111111100011100013556778
Q gi|254780843|r 178 MKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKR---NHISFLKTLDILANPRFTMGAVCIFLYVGAEVAIG 254 (420)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (420)
....................-.+..++...+..+.. +++++ ......-.....+||..|.................
T Consensus 194 iaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~-~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~ 272 (448)
T COG2271 194 IAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIY-EEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGIN 272 (448)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHH-HHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999479911149998788606822233-3202578864999999999728099999999999999999986
Q ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHC-CCHHHH--HHHHHHHHHHHHHHCC-H--HHHH
Q ss_conf 99998754201222101246888999987643100111111000000-000124--5555456768996223-3--6899
Q gi|254780843|r 255 SIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSA-EKTLCA--FATTACSLVILSSYTT-G--FISG 328 (420)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~-~--~~~~ 328 (420)
.|.+.|..+. .+++...+....+.+-.+.+.+.++.++.+||..+ +|.... .......+.......+ . ....
T Consensus 273 dW~p~YL~e~--k~~s~~~a~~a~~lfE~agl~G~LL~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~ 350 (448)
T COG2271 273 DWGPLYLSEV--KGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAPNGSYLLDA 350 (448)
T ss_pred HHHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
T ss_conf 4278999980--18777778899999999762788999998876504664649999999999999987628775599999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999996301565-6999999-99999-999999999999996123799999999999999999
Q gi|254780843|r 329 WSLIAVGLFNSIMFPTIFSLASASLEDQA-SGGSGII-CTTIS-GGVIIPLGVGYLVDIASLRDAMFVPAVCYIIIAIYG 405 (420)
Q Consensus 329 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~-g~~i~p~i~G~l~d~~g~~~~~~~~~~~~~~~~~~~ 405 (420)
+.+..+|+....-.-.+-..+.|..|+++ ++++++. .++++ |.+.+....|++.|.+||...|++..++.++..+..
T Consensus 351 ~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll 430 (448)
T COG2271 351 ILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLL 430 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_conf 99999999983599999999842651743010202033488877488607763046753687515999999999999999
Q ss_pred HHHHH
Q ss_conf 98531
Q gi|254780843|r 406 IYCCY 410 (420)
Q Consensus 406 ~~~~~ 410 (420)
+...+
T Consensus 431 ~~~~~ 435 (448)
T COG2271 431 LPVWN 435 (448)
T ss_pred HHHHH
T ss_conf 99985
No 31
>pfam07690 MFS_1 Major Facilitator Superfamily.
Probab=100.00 E-value=4.3e-38 Score=207.25 Aligned_cols=337 Identities=18% Similarity=0.171 Sum_probs=230.8
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHH
Q ss_conf 99999999998738998999-99980999899999999999999999999999998526289999999976432100000
Q gi|254780843|r 17 FILFFLFGGITSLNSILVPK-LQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTA 95 (420)
Q Consensus 17 ~~~ff~~g~~~~~~~~~~p~-l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~ 95 (420)
++..|+.++.++++.|++|. ++||+|+|++|+|++.+++.+++.+++++.|.++||+|||++++.+..+.+++.++++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~ig~~~s~~~~~~~i~~~~~G~l~Dr~g~k~~~i~~~~~~~i~~~~~~~ 81 (345)
T pfam07690 2 FLAAFLAGLGRSLLGPALPLYLAEDLGISPTEIGLLLTAFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLLF 81 (345)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 49999999999999999999999883989999999999999999999999999999909699999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf 01320246789998877756788876531000012303578877664431100003454788888641234204677655
Q gi|254780843|r 96 TIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSMLA 175 (420)
Q Consensus 96 a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~ 175 (420)
+ ++++.+.+.|++.|++.+...+...+++.|+.|+++|++.+++.+.....|..++|.+.+.+.....+.. .....
T Consensus 82 ~---~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~ig~~i~~~l~~~~~~~~-~f~~~ 157 (345)
T pfam07690 82 A---SSLWLLLVLRVLQGLGGGALFPAAAALIADWFPPEERGRALGLLSAGFGLGAALGPLLGGLLASLFGWRA-AFLIL 157 (345)
T ss_pred H---CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH-HHHHH
T ss_conf 7---5799999999998702210008999999840899999999999988602454312489999997014889-99999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 55577898886420011211001345555432101231012332100011112221111111000111000135567789
Q gi|254780843|r 176 DTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYVGAEVAIGS 255 (420)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (420)
.............. ..+.+.++++ +.++++........+..+++.....................
T Consensus 158 ~~~~~i~~i~~~~~--------------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (345)
T pfam07690 158 AILALLAAVLAALL--------------LPRPPPESKR-PKPAEEAPAPLVPWKLLLRDPVLWLLLALLLFGFAFFALFT 222 (345)
T ss_pred HHHHHHHHHHHHHH--------------HCCCCCCCCC-CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999--------------4888532223-43022201202359998757999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHH---H-HCCHHHHHHHH
Q ss_conf 9998754201222101246888999987643100111111000000000124555545676899---6-22336899999
Q gi|254780843|r 256 IMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILS---S-YTTGFISGWSL 331 (420)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~ 331 (420)
+.+.+ ....+.+....+............++...+...||.++++..........+..... . ...........
T Consensus 223 ~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 299 (345)
T pfam07690 223 YLPLY---QEVLGLSALLAGLLLGLAGLLGAIGRLLLGRLSDRLGRRRRLLLALLLLILAALGLALLSLTESSLWLLVAL 299 (345)
T ss_pred HHHHH---HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999---998099889999999999999999999999999990737999999999999999999998612199999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH-HHHHHHHHHHHH
Q ss_conf 99999999999999999996301565-699999-999999999999
Q gi|254780843|r 332 IAVGLFNSIMFPTIFSLASASLEDQA-SGGSGI-ICTTISGGVIIP 375 (420)
Q Consensus 332 ~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~g~~i~p 375 (420)
.+.|++.+..++...+...+..|++. +.+.+. .....+|++++|
T Consensus 300 ~i~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ig~~igP 345 (345)
T pfam07690 300 LLLGFGAGLVFPALNALASDLAPKEERGTASGLYNTAGSLGGALGP 345 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9999999999999999999878998999999999999999888392
No 32
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily; InterPro: IPR004812 The drug resistance transporter Bcr/CflA proteins are predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in Escherichia coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=100.00 E-value=2e-37 Score=203.95 Aligned_cols=354 Identities=14% Similarity=0.084 Sum_probs=262.3
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999-998738998999999809998999999999999999999999999985262899999999764321
Q gi|254780843|r 12 TKIYIFILFFLFG-GITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGC 90 (420)
Q Consensus 12 ~~i~i~~~ff~~g-~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ 90 (420)
+.++...++++-+ +...++-|.+|.+++||+.+.++++.-.|.|..|.+++|+..|+++||+||||+++.|.+++++++
T Consensus 5 ~~~~~L~~L~~L~pl~~DMYLPa~p~i~~~L~~~as~vQ~tLt~yl~G~a~GQL~~GPlSD~~GRrPvlL~G~~~fa~~S 84 (400)
T TIGR00710 5 AFVLLLGLLSILGPLGIDMYLPAFPEIAKDLSVSASLVQLTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLLIFALSS 84 (400)
T ss_pred HHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 99999989876320211252120789898628786689999999999999989865233320367238899999999999
Q ss_pred HCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC-HHHHHHHHHHHHHHCCCHHHHHHHHHH--HHHHCCCC
Q ss_conf 000000132024678999887775678887653100001230-357887766443110000345478888--86412342
Q gi|254780843|r 91 ILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGD-PNTAVSRLTFAQFFNSLGTAIFPYIGS--VLMLGNLA 167 (420)
Q Consensus 91 ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~--~l~~~~~~ 167 (420)
+.+..+ +|-..+.+.|+++|++.+...+...+.+.|.++ ++|-.+.++.......+...++|.+++ ++..+..|
T Consensus 85 l~~~~~---~ni~~L~~lRF~Qa~gasA~~V~~~AlvRD~Y~G~~e~s~~~s~l~~~~~~~P~~aP~~Ggai~~~~~l~W 161 (400)
T TIGR00710 85 LGLALS---NNIETLLVLRFLQAFGASAALVISQALVRDIYPGREELSKIYSILMLVLALAPAVAPLIGGAIYVLVFLSW 161 (400)
T ss_pred HHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999998---51999999999999999899999998885020325789999999999999998788888699999985209
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 04677655555778988864200112110013455554321012310123321000111122211111110001110001
Q gi|254780843|r 168 SPNTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYV 247 (420)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (420)
+..+..+...........+..+ ++.+.+++..+.+.....++.....|+|..+..........
T Consensus 162 haIF~~L~l~~~~l~a~~f~~~-----------------pET~~~~~r~P~~~~~~~~~f~~l~k~k~~~gY~L~~ga~~ 224 (400)
T TIGR00710 162 HAIFAVLSLIGILLSALIFFLL-----------------PETLPKEKRIPLQISTSVETFLLLLKDKEFLGYALIYGASF 224 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHC-----------------CCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999855-----------------12274010374030013999867887688899999999986
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHH---------HHHHHHHHHH
Q ss_conf 3556778999987542012221012468889999876431001111110000000001245---------5554567689
Q gi|254780843|r 248 GAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAF---------ATTACSLVIL 318 (420)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 318 (420)
+..+.+....|....+ ..+.++...+..........+.+....++..+|.+.+...... ..+..+....
T Consensus 225 g~~Faf~~~~Pfv~~~--~~gVsp~~fg~lf~~~~~a~i~g~f~~gr~~~k~~~~~~lr~~~GfifslCGl~~~~~~a~~ 302 (400)
T TIGR00710 225 GGFFAFLSGAPFVYID--IMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKIGAKSLLRIAVGFIFSLCGLVLFIVSAVL 302 (400)
T ss_pred HHHHHHHHHHHHHHHH--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8789999841788640--01465677899999999999999999986665431001478999999999999999999999
Q ss_pred HHHCCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHH
Q ss_conf 9622336------899999999999999999999999963015656999999999--99999999999999996123
Q gi|254780843|r 319 SSYTTGF------ISGWSLIAVGLFNSIMFPTIFSLASASLEDQASGGSGIICTT--ISGGVIIPLGVGYLVDIASL 387 (420)
Q Consensus 319 ~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~i~p~i~G~l~d~~g~ 387 (420)
...+.-. .....+...+.+.+...+...+.+.|..|+.+|+++++..+- .+++.+++.+.-.+...+-+
T Consensus 303 l~~~~~~~l~~~~~~i~~~~~~~~g~~~~~s~a~~~AL~~f~h~aGtA~al~g~l~~~l~a~vg~lvs~~i~~~Ta~ 379 (400)
T TIGR00710 303 LVITALLGLGSWLLIIGPMIFVGIGVSMVSSIAMALALEKFPHVAGTASALLGTLRLVLGAIVGLLVSSLIKINTAW 379 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
T ss_conf 99999986799999999999999768899999999986215874101999999999999999999999751676148
No 33
>PRK03633 putative MFS family transporter protein; Provisional
Probab=100.00 E-value=4e-36 Score=197.41 Aligned_cols=355 Identities=15% Similarity=0.146 Sum_probs=240.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHC
Q ss_conf 99999999999999873899899999980999899999999999999999999999998526289999999976432100
Q gi|254780843|r 13 KIYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCIL 92 (420)
Q Consensus 13 ~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll 92 (420)
...+....++.+...++.+|++|...++.|.|++++|++.|.|++|..++++..+++.||+|+||++..+..+.+++.++
T Consensus 8 i~~L~~~~~l~~l~~Gl~~pll~l~l~~~G~s~~~iGl~~s~~~~G~llg~~~~~~li~r~G~~r~~~~~~~l~a~~~l~ 87 (381)
T PRK03633 8 VMLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGMVSSSYFTGNLVGTLLTGYVIKRIGFNRSYYLASLIFAAGCVG 87 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999998889999999986998789999999999999999987799999818899999999999999999
Q ss_pred CHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHH
Q ss_conf 00001320246789998877756788876531000012303578877664431100003454788888641234204677
Q gi|254780843|r 93 FTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTS 172 (420)
Q Consensus 93 ~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~ 172 (420)
+.+ .++++.+...|++.|++.+..+....+++.+..++++|++.++++......|...||.+.+..-... ....
T Consensus 88 ~~l---~~~~~~W~~lR~l~G~~~a~~~v~~EsWln~~a~~~~RGrv~~iY~~~~~~g~~~Gp~ll~~~~~~~---~~~f 161 (381)
T PRK03633 88 LGL---MVGFWSWLGWRFLAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTEL---MSVL 161 (381)
T ss_pred HHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH---HHHH
T ss_conf 998---8129999999999999999999999999854497333589999999999999999999984167006---7899
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 65555577898886420011211001345555432101231012332100011112221111111000111000135567
Q gi|254780843|r 173 MLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYVGAEVA 252 (420)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (420)
....... . ... .. ....+.+.++ .+++++. +.++..+.+..................
T Consensus 162 ~~~~~l~--~---~al----------ip---i~~~~~~~p~--~~~~~~~---~~~~l~~~~~ap~~~~~~~~~G~~~~~ 218 (381)
T PRK03633 162 PWVTGLV--L---AGI----------LP---LLFTRVLNQQ--AENHDST---SIWPMLKLRQARLGVNGCIISGIVLGS 218 (381)
T ss_pred HHHHHHH--H---HHH----------HH---HHHCCCCCCC--CCCCCCC---CHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 9999999--9---999----------99---9963788999--8887777---789898850258999999999999999
Q ss_pred HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Q ss_conf 78999987542012221012468889999876431001111110000000001245555456768996223368999999
Q gi|254780843|r 253 IGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYTTGFISGWSLI 332 (420)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (420)
.....|.|.. ..|.+..+.+...+....+....+...++++||++|+++................ .........+
T Consensus 219 ~~sl~Pvy~~---~~Gls~~~ia~~~~~~~~Gg~l~Q~PiG~LSDr~dRr~vl~~~~~~~~~~~~~~~--~~~~~~~~lf 293 (381)
T PRK03633 219 LYGLMPLYLN---HQGMSNASIGFWMAVLVSAGILGQWPMGRLADRFGRLLVLRVQVFVVILGSIAML--SQAAMAPALF 293 (381)
T ss_pred HHHHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH
T ss_conf 9988899999---8499888999999999999999982459998873729999999999999999999--8899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999996301565-69-999999999999999999999999612379999999999999
Q gi|254780843|r 333 AVGLFNSIMFPTIFSLASASLEDQA-SG-GSGIICTTISGGVIIPLGVGYLVDIASLRDAMFVPAVCYIII 401 (420)
Q Consensus 333 ~~g~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~g~~i~p~i~G~l~d~~g~~~~~~~~~~~~~~~ 401 (420)
+.|......||...+...|..+++. .. .+.......+|+.+||++.|...|..|.+..|+..+....+.
T Consensus 294 ~~G~~~~~lY~l~lA~~~d~~~~~~~v~a~a~~~~~~~~Gsi~GP~~ag~~M~~~G~~~lf~~~a~~~l~~ 364 (381)
T PRK03633 294 ILGAAGFTLYPVAMAWACEKVEHHQLVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIY 364 (381)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 99999854799999998662778889999999999998198872899999999858128999999999999
No 34
>TIGR00881 2A0104 phosphoglycerate transporter family protein; InterPro: IPR000849 Proteins in this group are involved in the transport system that mediates the uptake of a number of sugar phosphates as well as the regulatory components that are responsible for induction of this transport system by external glucose 6-phosphate. In Escherichia coli its role in transmembrane signalling may involve sugar-phosphate-binding sites and transmembrane orientations similar to those of the transport protein . The following proteins in this entry, involved in the uptake of phosphorylated metabolites, are evolutionary related , : E. coli, Bacillus subtilis and Haemophilus influenzae glycerol-3- phosphate transporter (gene glpT). Salmonella typhimurium phosphoglycerate transporter (gene pgtP). E. coli and S. typhimurium hexose-6-phosphate transporter (gene uhpT). E. coli and S. typhimurium protein uhpC. UhpC is necessary for the expression of uhpT and seems to act jointly with the uhpB sensor/kinase protein. Human glucose 6-phosphate translocase . These proteins of about 50 kDa apparently contain 12 transmembrane regions.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=100.00 E-value=1.3e-38 Score=209.94 Aligned_cols=369 Identities=11% Similarity=0.080 Sum_probs=274.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCC-C
Q ss_conf 999999987389989999998099989999999999999999999999999852628999999997643210000001-3
Q gi|254780843|r 20 FFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATI-E 98 (420)
Q Consensus 20 ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~-~ 98 (420)
++.+-+.+...+.+.|+|+||+++|.+|+|++.|.+.+.|.++..+.|.++||.+.|..+.+|++++++.++.++++. .
T Consensus 4 Y~~~Y~~Rknf~~a~P~l~E~~~L~~~dlG~~~s~~~i~Yg~sK~~~G~~sDr~~~r~fl~~GL~l~a~v~~~~gfs~wa 83 (404)
T TIGR00881 4 YAAYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGMVSDRSNPRVFLAIGLILCAIVNIFFGFSTWA 83 (404)
T ss_pred EEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCH
T ss_conf 10237775319988899886228887578899999999998746775665326764899999999999999998852235
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHH--HHHHH
Q ss_conf 2024678999887775678887653100001230357887766443110000345478888864123420467--76555
Q gi|254780843|r 99 ITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNT--SMLAD 176 (420)
Q Consensus 99 ~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~--~~~~~ 176 (420)
..+++.+.+++++.|+.+|...|.+..++..|+|+++|++..++++...++|..+.|.+..........|... .....
T Consensus 84 tS~l~~~~~l~~l~G~fQG~G~P~~~r~~~~W~~~~eRGt~~~~wn~~~nvGG~~~pp~~~~~~~~~~~w~~~~~~~~~g 163 (404)
T TIGR00881 84 TSSLWVMAALMALNGLFQGMGWPPCGRLLTKWFSRSERGTWVAIWNISHNVGGGLLPPLVLFGIALLYSWHVVSSFIVPG 163 (404)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 78999999999999887750675212402321576531126677888988757899999999999881655688999999
Q ss_pred HHHHHHHHHHHHHCCCC-CCCHHHHHHHHHHHH----CCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 55778988864200112-110013455554321----0123101233210001111222111111100011100013556
Q gi|254780843|r 177 TMKDYQTDTARVISQMY-LVLAIILFLATWLCW----MQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYVGAEV 251 (420)
Q Consensus 177 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (420)
................. ......+..+...++ .++++++++++.+++........+++..|.........+....
T Consensus 164 ~~aii~s~~~~~~~~~~p~~~GL~~~e~~~~~~~~~l~~~~~~~~~~~~~~~~i~~~~vl~n~~lW~is~~~~fVy~vr~ 243 (404)
T TIGR00881 164 IIAIIVSLICLLLLRDSPQSVGLPKLEEMPNEEGGGLPEEDKEKKEEELTKKEIFLQYVLLNKVLWYISLGYVFVYVVRT 243 (404)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf 99999988954411577777886975567688886336503344353031577656777416135689999999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCH-----H-HCCCHHHHHHHHHHHH--HHHH---H
Q ss_conf 77899998754201222101246888999987643100111111000-----0-0000012455554567--6899---6
Q gi|254780843|r 252 AIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSR-----F-SAEKTLCAFATTACSL--VILS---S 320 (420)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~--~~~~---~ 320 (420)
....|.+.|..+.. +.+..........+..+.+++.+..++.+|| . ..+|..........+. .... .
T Consensus 244 ~~~~W~~~YL~~~k--g~s~~~~~~~~~~~E~gglvGtll~GW~SDkA~~~~~~~~~R~~~~~~~~ali~~~~~~~~~~~ 321 (404)
T TIGR00881 244 GILDWGPLYLTQEK--GFSKEKASAAFTLFELGGLVGTLLAGWLSDKATRKFLFKGRRAPLAVIFMALIIVSLLVYWLIP 321 (404)
T ss_pred HHHCCHHHHHHHHC--CCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99703056656530--6551023144578888788999999999999999885158853568999999999999998742
Q ss_pred HCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH-HHHHHHH-HHHHHHHHHHHH------HHHHH
Q ss_conf 223---3689999999999999999999999996301565-6999999-9999999-999999999999------61237
Q gi|254780843|r 321 YTT---GFISGWSLIAVGLFNSIMFPTIFSLASASLEDQA-SGGSGII-CTTISGG-VIIPLGVGYLVD------IASLR 388 (420)
Q Consensus 321 ~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~g~-~i~p~i~G~l~d------~~g~~ 388 (420)
..+ .....+..+.+|++.......+...+.|..|++. +.+.++. .++++|+ ...+...|++.| .+||.
T Consensus 322 ~~~~~n~~~~~~~~~~~Gf~~yGp~~L~g~~A~~~aP~~a~G~a~G~~Gf~ay~gGs~~A~~~~g~~~~~tPvfG~~gW~ 401 (404)
T TIGR00881 322 AANYTNKLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGSILAGLPLGYLADGTPVFGVFGWA 401 (404)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCEEEEECCCC
T ss_conf 26887358999999999988889999999999720158899998999998888799888624462343144023205776
Q ss_pred HH
Q ss_conf 99
Q gi|254780843|r 389 DA 390 (420)
Q Consensus 389 ~~ 390 (420)
.+
T Consensus 402 g~ 403 (404)
T TIGR00881 402 GA 403 (404)
T ss_pred CC
T ss_conf 67
No 35
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-37 Score=203.32 Aligned_cols=385 Identities=16% Similarity=0.178 Sum_probs=287.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
Q ss_conf 53112005999999999999999987-38998999999809998999999999999999999999999985262899999
Q gi|254780843|r 3 DTIARNIQCTKIYIFILFFLFGGITS-LNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICT 81 (420)
Q Consensus 3 ~~~~k~~~~~~i~i~~~ff~~g~~~~-~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~ 81 (420)
+...|+...+-+.+....|..+|..+ +.+++.+.+++|+|+|+.|.+++.+...+.-.+..+|.|.+.||+|.|++...
T Consensus 5 ~~~~k~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~ 84 (417)
T COG2223 5 EARGKRIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTIL 84 (417)
T ss_pred HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
T ss_conf 74354400579999999999999999999998865412148898889999999998747899877753401284379999
Q ss_pred HHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf 99976432100000013202467899988777567888765310000123035788776644311000034547888886
Q gi|254780843|r 82 GLLIMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVL 161 (420)
Q Consensus 82 ~~~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 161 (420)
+.++..+-++....+...++++.++..+.+.|++.+.. .+..+.++.++|+++++.++++.. ..+.|..+...+...+
T Consensus 85 s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~GasF-av~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v 162 (417)
T COG2223 85 SMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGASF-AVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLV 162 (417)
T ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEE-HCCCCCCCCCCCHHHHHHHHHHHC-CCCCCHHHHHHHHHHH
T ss_conf 99999999999999712875689999999970166300-002544211188544418988760-5530199999988999
Q ss_pred HHCCCC--CHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCC-CCCCCCCCCCCCCC
Q ss_conf 412342--046776555557789888642001121100134555543210123101233210001-11122211111110
Q gi|254780843|r 162 MLGNLA--SPNTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISF-LKTLDILANPRFTM 238 (420)
Q Consensus 162 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 238 (420)
...... |......+.............. . . +.... +...+... .+.+...++++.|.
T Consensus 163 ~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~----~---------~-d~p~~------r~~~~~~~~~~~~~v~~~~~~W~ 222 (417)
T COG2223 163 AVAFGFLAWRNVAGIYVVALAIAAVLAWLG----M---------N-DVPEH------RASVKPQLPAQLKAVFSNKDTWL 222 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----H---------C-CCHHH------HCCCCCCCHHHHHHHHCCCCHHH
T ss_conf 999725899999999999999999999998----4---------7-68665------23555320057788863820699
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 00111000135567789999875420122210124688899998764310011111100000000012455554567689
Q gi|254780843|r 239 GAVCIFLYVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVIL 318 (420)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (420)
....+....+.......+++.|...+ ++.+....+.............|..+++++||++.++........+++....
T Consensus 223 lsllY~~tFG~Fvgfs~~l~~~~~~~--fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~ 300 (417)
T COG2223 223 LSLLYFATFGGFVGFSAYLPMYLVTQ--FGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAAL 300 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999986--4987231889999878899999850444433135344799999999999999
Q ss_pred HHHCC--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH-HH
Q ss_conf 96223--------36899999999999999999999999963015656999999-9999999999999999999612-37
Q gi|254780843|r 319 SSYTT--------GFISGWSLIAVGLFNSIMFPTIFSLASASLEDQASGGSGII-CTTISGGVIIPLGVGYLVDIAS-LR 388 (420)
Q Consensus 319 ~~~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~i~p~i~G~l~d~~g-~~ 388 (420)
..... ..........++++.+......+.+.....++..+.+.++. ..+.+|+...|...|...|.+| ++
T Consensus 301 l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~ 380 (417)
T COG2223 301 LSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYT 380 (417)
T ss_pred HHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHEEECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHH
T ss_conf 97056344667643999999999999915676300331318778664678879988542566540489999998426379
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999985311
Q gi|254780843|r 389 DAMFVPAVCYIIIAIYGIYCCYK 411 (420)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~ 411 (420)
.+|++...+++++...-.....|
T Consensus 381 ~~f~~~~~~~~~a~v~~~~~y~r 403 (417)
T COG2223 381 GAFMLLLAFYLVALVLTWALYAR 403 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999971
No 36
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=4.6e-34 Score=187.04 Aligned_cols=394 Identities=10% Similarity=-0.019 Sum_probs=229.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCHHHHHHHH--HHH---HHHHHHHHHHHHHHHHHHCHHHHH
Q ss_conf 120059999999999999999873899899999980-99989999999--999---999999999999999852628999
Q gi|254780843|r 6 ARNIQCTKIYIFILFFLFGGITSLNSILVPKLQNSF-SLTYLQAMLVE--AIF---FSCYFFFSIPAGMFIQRYGYIKGI 79 (420)
Q Consensus 6 ~k~~~~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~-~~s~~~~g~i~--s~~---~~~~~i~~~~~G~l~Dr~Grr~~l 79 (420)
.|+.|...+.-.+.-++--||..+.+.+.+.+.+.| .-++...+++. +.| ++..-+++++.|++.||+|||+++
T Consensus 11 ~~~~rk~i~a~~~G~~lEwyDF~iYg~~A~~i~~~FFP~~~~~~~ll~tfa~favgf~~RPlGgivfG~lgDr~GRk~~L 90 (490)
T PRK10642 11 DGKLRKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKIL 90 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
T ss_conf 89999999999986899999999999999999986199999469999999999999998857999999999852109999
Q ss_pred HHHHHHHHHHHHCCHHCCCCCHHH-----HHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHH
Q ss_conf 999997643210000001320246-----789998877756788876531000012303578877664431100003454
Q gi|254780843|r 80 CTGLLIMSLGCILFTATIEITTFK-----VFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIF 154 (420)
Q Consensus 80 ~~~~~~~~i~~ll~~~a~~~~~~~-----~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g 154 (420)
.++++++++++.+.++.+...+.. ++.++|+++|++.|.......+++.|..|+++|+...++.+.+...|..++
T Consensus 91 ~~ti~lM~~~T~ligllPtY~~IGi~ApilLvllRllQG~s~GGE~~ga~~~l~E~aP~~~RG~~~s~~~~g~~~G~lla 170 (490)
T PRK10642 91 AITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLG 170 (490)
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHH
T ss_conf 99999999999999874779988999999999999998886314276899999985897650201238988899999999
Q ss_pred HHHHHHHHHCC-------CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCC
Q ss_conf 78888864123-------42046776555557789888642001121100134555543210123101233210001111
Q gi|254780843|r 155 PYIGSVLMLGN-------LASPNTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKT 227 (420)
Q Consensus 155 ~~~~~~l~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (420)
..+...+.... .+|+..+......... ..+++...... .. . .....+.++++.+...+....+.
T Consensus 171 a~~~~~l~~~l~~~~~~~wGWRIPFlig~~l~li----gl~iR~~l~ES-P~-F---~~~~e~~~~~~~~~~~~~~~~pl 241 (490)
T PRK10642 171 AGVVVLISTIVGEANFLDWGWRIPFFIALPLGII----GLYLRHALEET-PA-F---QQHVDKLEQGDREGLQDGPKVSF 241 (490)
T ss_pred HHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHH----HHHHHHCCCCC-HH-H---HHHHHHHHHHHCCCCCCCCCCCH
T ss_conf 9999999986698776265529999999999999----99999808998-76-8---98887764210000134654449
Q ss_pred CCCCCC-C-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHH
Q ss_conf 222111-1-11100011100013556778999987542012221012468889999876431001111110000000001
Q gi|254780843|r 228 LDILAN-P-RFTMGAVCIFLYVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTL 305 (420)
Q Consensus 228 ~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (420)
....++ + ................+....+.+.|.... .+.+...................+..++++||++++++.
T Consensus 242 ~e~~~~~~r~ll~~~gl~~~~~~~~Y~~~~y~ptyl~~~--l~~s~~~~~~~~~~~~v~~~~~~pl~G~LSDriGRr~vl 319 (490)
T PRK10642 242 KEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHN--LHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFV 319 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
T ss_conf 999998479999999999999999999999999999980--299877899999999999999999999999882648999
Q ss_pred HHHHHHHHHHHH---HHHHCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
Q ss_conf 245555456768---9962233-68999999999999999999999999630156569---9999999999999999999
Q gi|254780843|r 306 CAFATTACSLVI---LSSYTTG-FISGWSLIAVGLFNSIMFPTIFSLASASLEDQASG---GSGIICTTISGGVIIPLGV 378 (420)
Q Consensus 306 ~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~i~p~i~ 378 (420)
........+... ....... ........+.++..+..+....+...|.+|.+.+. +-+++....+| ...|.+.
T Consensus 320 i~g~i~~~vl~~P~f~ll~~~~~~~i~~~~~il~~~~~~~~g~~~a~l~ElFPt~vR~TG~~~~Ynl~~~~g-G~tP~I~ 398 (490)
T PRK10642 320 ILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLIA-GLTPTLA 398 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH-HHHHHHH
T ss_conf 999999999999999998479699999999999999999988999999986887067798879999999999-8999999
Q ss_pred HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999961237--9999999999999999998531110
Q gi|254780843|r 379 GYLVDIASLR--DAMFVPAVCYIIIAIYGIYCCYKEN 413 (420)
Q Consensus 379 G~l~d~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (420)
.++.+.+|.. .+++++.. .++.+...+..++.+
T Consensus 399 t~Li~~Tg~~~~pa~Yl~~~--a~i~lia~~~~~ET~ 433 (490)
T PRK10642 399 AWLVESSQNLMMPAYYLMVV--AVIGLITGVTMKETA 433 (490)
T ss_pred HHHHHHHCCCCHHHHHHHHH--HHHHHHHHHHCCCCC
T ss_conf 99999879970899999999--999999999564248
No 37
>TIGR00711 efflux_EmrB drug resistance MFS transporter, drug:H+ antiporter-1 (14 Spanner) (DHA2) family; InterPro: IPR004638 This subfamily of drug efflux proteins, a part of the major facilitator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in Escherichia coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.; GO: 0006810 transport, 0016021 integral to membrane.
Probab=100.00 E-value=1.1e-34 Score=190.22 Aligned_cols=365 Identities=13% Similarity=0.081 Sum_probs=278.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999999998738998999999809998999999999999999999999999985262899999999764321000
Q gi|254780843|r 14 IYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILF 93 (420)
Q Consensus 14 i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~ 93 (420)
+.+.+-.|+.=+|..+.++++|.+..||+.|.++..|+.+.|.++.++.=|..|+++||+|.||.++++.+.+++++++|
T Consensus 5 ~~l~~g~FMa~LD~Tiv~va~p~~~~~lg~s~~~~~Wv~TsY~~A~a~~IPl~gwLa~R~G~r~lFl~~~~~Ft~~S~~C 84 (501)
T TIGR00711 5 IVLMLGTFMAVLDSTIVNVAIPTLAGDLGASLSQVQWVITSYMLANAIVIPLTGWLAKRFGTRKLFLISTLAFTLGSLLC 84 (501)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999987763211441002323146788899999889999987084478999999999999999
Q ss_pred HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHH
Q ss_conf 00013202467899988777567888765310000123035788776644311000034547888886412342046776
Q gi|254780843|r 94 TATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSM 173 (420)
Q Consensus 94 ~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~ 173 (420)
+.| +|+..+++.|.+||++.|...|...+.+...+||++|+++++++.....++.+.||.++|++.+...|++.++.
T Consensus 85 g~A---~nl~~lIifR~~QG~~gG~l~Pl~~~~l~~~~PP~~Rg~~~~~~Gl~v~~AP~~GP~LGGwI~e~~~Wrw~F~~ 161 (501)
T TIGR00711 85 GVA---NNLELLIIFRVIQGFGGGLLIPLSFSLLLNIYPPEKRGLAMAIWGLTVLVAPALGPTLGGWIIENYEWRWIFYI 161 (501)
T ss_pred HHH---HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHCCCCCCHHHHHHCCCCHHEEEH
T ss_conf 985---20899999999988622048999999999747912158356421066874202353104688732622220212
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCHHHHHHH------------HHHH-HCCCCCCHH----------------------H-
Q ss_conf 555557789888642001121100134555------------5432-101231012----------------------3-
Q gi|254780843|r 174 LADTMKDYQTDTARVISQMYLVLAIILFLA------------TWLC-WMQRNSFAD----------------------H- 217 (420)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~-~~~~~~~~~----------------------~- 217 (420)
............+................. .... ..+.+++.. +
T Consensus 162 NvPiG~~v~~~a~~~l~~d~~~~~~~~~~D~~G~~L~~~g~~~Ll~~ls~g~~~GW~~~~~il~~~i~~~~~~~~fv~~s 241 (501)
T TIGR00711 162 NVPIGIIVVVVALFILPEDREKEKASKNLDFLGLLLLSVGLGSLLYVLSEGQEEGWFDSNLILILSIVGLVAIIAFVVRS 241 (501)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 57899999999999844666661666311278899999999999987521566889986315699999999999999978
Q ss_pred HHHHCCCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC-C
Q ss_conf 3210001111222111111100-0111000135567789999875420122210124688899998764310011111-1
Q gi|254780843|r 218 KRNHISFLKTLDILANPRFTMG-AVCIFLYVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTW-I 295 (420)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 295 (420)
+-.+++..-..+.++.+.+... ...........+.....+|.|.+.. .+++..+.|.......+......++.+. .
T Consensus 242 el~~~nP~~D~~~F~~~~Ft~~f~~~~~~~~~~lyg~~~LLP~~Lq~~--~~~~~~~~Gl~~~P~gl~~~l~sPIaG~~~ 319 (501)
T TIGR00711 242 ELTDDNPLVDLRLFKYRNFTIGFCVYSLLLGLGLYGAVYLLPLYLQQV--LGYTALQAGLHILPVGLAPLLSSPIAGRML 319 (501)
T ss_pred HHCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 741468800443402025788999999999999999999999999986--279978999999889999999707999998
Q ss_pred CCHHHCCCHHHHHHHHHHHHHHHHHHC-----CHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH-HHH
Q ss_conf 000000000124555545676899622-----33689999-99999999999999999999630156-56999999-999
Q gi|254780843|r 296 LSRFSAEKTLCAFATTACSLVILSSYT-----TGFISGWS-LIAVGLFNSIMFPTIFSLASASLEDQ-ASGGSGII-CTT 367 (420)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~ 367 (420)
.||.+.|+.........+......... +....... ....|++.+..+-.+.+.+.+..|++ .+.+++.. ...
T Consensus 320 ~~k~~~R~l~~ig~~~~a~~~y~~~~~~~~~~~f~~~~~~G~~i~G~g~~~~fmP~~~~al~~Lp~~~~~~gs~L~n~~R 399 (501)
T TIGR00711 320 GDKIDPRLLVTIGLILYAVGFYLRAFTLTPDTDFLAIALPGQFIRGFGMGCFFMPLTTIALSKLPAEKVARGSSLSNFLR 399 (501)
T ss_pred HCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 41468068999999999999988852215578618888677999999999999875577761252357622689999999
Q ss_pred HHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999
Q gi|254780843|r 368 ISGGVIIPLGVGYLVD 383 (420)
Q Consensus 368 ~~g~~i~p~i~G~l~d 383 (420)
.+||.+|..+...+.+
T Consensus 400 ~~gGSiGTal~t~~~~ 415 (501)
T TIGR00711 400 QLGGSIGTALITTILT 415 (501)
T ss_pred HHHHHHHHHHHHHHHH
T ss_conf 9888999999999998
No 38
>KOG2532 consensus
Probab=100.00 E-value=5.7e-35 Score=191.59 Aligned_cols=376 Identities=15% Similarity=0.143 Sum_probs=269.1
Q ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99809998999999999999999999999999985262899999999764321000000132024678999887775678
Q gi|254780843|r 38 QNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATIEITTFKVFLIALCILAIGVV 117 (420)
Q Consensus 38 ~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~ 117 (420)
+.++++|..|.|++.|+++.|+.++++|.|+++||+|.|+++..+.++.++.++++..+.... ++.+.+.|+++|++.+
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~-~~~~~~~R~lqGl~~g 143 (466)
T KOG2532 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIG-FYLLLVLRFLQGLGQG 143 (466)
T ss_pred CCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHCCHHHH
T ss_conf 641135855434764899999999982379999891853889999999999999999999826-2287899997104676
Q ss_pred HHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
Q ss_conf 88765310000123035788776644311000034547888886412342046776555557789888642001121100
Q gi|254780843|r 118 IIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSMLADTMKDYQTDTARVISQMYLVLA 197 (420)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (420)
...++.......|.|++||++..+...++...|.+++..+.+.+.+...+|...+...+.........+..........
T Consensus 144 ~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~- 222 (466)
T KOG2532 144 VLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSK- 222 (466)
T ss_pred HHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH-
T ss_conf 6644031020105888889999999999989989998864899862576987799998799898877655531488342-
Q ss_pred HHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf 13455554321012310123321000111122211111110001110001355677899998754201222101246888
Q gi|254780843|r 198 IILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYVGAEVAIGSIMANYLMRHDTLHLDGISAGQH 277 (420)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (420)
.......+.+.-++...+++..+....+.++..+++..|......++..........+.|.|..+. ++.+....+..
T Consensus 223 -h~~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~V--L~f~v~~~G~~ 299 (466)
T KOG2532 223 -HPNISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEV--LGFDVRETGFL 299 (466)
T ss_pred -CCCCCHHHHHHHHHCCCHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH--CCCCHHHHHHH
T ss_conf -797689999999827440003788999989997084999999999998899999999771999973--28785454699
Q ss_pred HHHHHHHHHHHCCCCCCCCCHHHCC--------CH-HHHHHHHHHHHHHHHHHCCHHHH--HHHHHHHHH-HHHHHHHHH
Q ss_conf 9999876431001111110000000--------00-12455554567689962233689--999999999-999999999
Q gi|254780843|r 278 TAIYWGSAMIGRFIGTWILSRFSAE--------KT-LCAFATTACSLVILSSYTTGFIS--GWSLIAVGL-FNSIMFPTI 345 (420)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~-~~~~~~~~~ 345 (420)
.+.............+.+.||...+ +. -........+......+...... .+....+.. ..+...+..
T Consensus 300 salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf 379 (466)
T KOG2532 300 SALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGF 379 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHH
T ss_conf 87699999999999999988987536865799999998889999998765300588751589999999999864011103
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH-H--HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCCCC
Q ss_conf 9999963015656999999-999999999999999999-9--61237999999999999-999999853111020127
Q gi|254780843|r 346 FSLASASLEDQASGGSGII-CTTISGGVIIPLGVGYLV-D--IASLRDAMFVPAVCYII-IAIYGIYCCYKENNFEQN 418 (420)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~-~~~~~g~~i~p~i~G~l~-d--~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 418 (420)
+.-..+..|++++...+.. ..+.+.+.++|.+.|.+. | ...|+..|++.++.+.+ ..+|.++..-+...|+|+
T Consensus 380 ~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f~s~e~~~w~~~ 457 (466)
T KOG2532 380 YKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFFGSGEPAPWTKS 457 (466)
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCC
T ss_conf 442021026679999999999999999888782013507999799999999999999987566155624743576677
No 39
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=1.8e-32 Score=179.08 Aligned_cols=411 Identities=12% Similarity=0.003 Sum_probs=214.4
Q ss_pred CCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH----CC----CHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 97531120059999999-999999999873899899999980----99----9899999999999999999999999998
Q gi|254780843|r 1 MKDTIARNIQCTKIYIF-ILFFLFGGITSLNSILVPKLQNSF----SL----TYLQAMLVEAIFFSCYFFFSIPAGMFIQ 71 (420)
Q Consensus 1 m~~~~~k~~~~~~i~i~-~~ff~~g~~~~~~~~~~p~l~~~~----~~----s~~~~g~i~s~~~~~~~i~~~~~G~l~D 71 (420)
|+.--+++..+...++. +-.+++|+|.++++..+|.+++++ +. ++...|++.+.+.+|..++++..|+++|
T Consensus 1 ~~~~~~~~~~~~~~~~a~lg~~~fGYd~~~is~~~~~~~~~~~~~~~~~~~~~~~~~g~i~s~~~iG~~iGal~~g~l~D 80 (486)
T PRK10077 1 MNTQYNSSYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSS 80 (486)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98765769999999999999999998371684689989998436667885305789999999999999999999999987
Q ss_pred HHCHHHHHHHHHHHHHHHHHCCHH---------------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHH
Q ss_conf 526289999999976432100000---------------01320246789998877756788876531000012303578
Q gi|254780843|r 72 RYGYIKGICTGLLIMSLGCILFTA---------------TIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTA 136 (420)
Q Consensus 72 r~Grr~~l~~~~~~~~i~~ll~~~---------------a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r 136 (420)
|+|||+++.++.+++.++.+..++ ....++...+.+.|++.|+|.|...+..+.+++|..|++.|
T Consensus 81 r~GRk~~l~~~~~~~~i~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~R~i~G~g~G~~~~~~p~yisE~ap~~~R 160 (486)
T PRK10077 81 RFGRRDSLKIAAVLFFISAVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIR 160 (486)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
T ss_conf 74559999999999999999987665555530312578888875799999999999855987888999999984878674
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHCC-------CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCH---HHHHHHHHH
Q ss_conf 87766443110000345478888864123-------42046776555557789888642001121100---134555543
Q gi|254780843|r 137 VSRLTFAQFFNSLGTAIFPYIGSVLMLGN-------LASPNTSMLADTMKDYQTDTARVISQMYLVLA---IILFLATWL 206 (420)
Q Consensus 137 ~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 206 (420)
++..+..+.....|..++..++..+.... ..|+............................ ..+......
T Consensus 161 G~~~~~~~~~~~~G~l~~~~v~~~~~~~~~~~~~~~~~WR~~~~~~~ipa~~~~~~~~~lPESPrwL~~kgr~eeA~~~l 240 (486)
T PRK10077 161 GKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYFVPESPRWLMSRGKQEQAESIL 240 (486)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHH
T ss_conf 14756999999999999999999986078721257733899999899999999999996786709999869999999999
Q ss_pred HHCCCCCCHHH--HHH----HCCCCCCCCCCCCCCCCCCHHHHHHHH----HHHHHHHHHHHHHHHHHCCCCCCHHHHHH
Q ss_conf 21012310123--321----000111122211111110001110001----35567789999875420122210124688
Q gi|254780843|r 207 CWMQRNSFADH--KRN----HISFLKTLDILANPRFTMGAVCIFLYV----GAEVAIGSIMANYLMRHDTLHLDGISAGQ 276 (420)
Q Consensus 207 ~~~~~~~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (420)
.+...+++.++ ++. +....+..+..+.. ............ ........+.+.... . .+.+......
T Consensus 241 ~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~q~~Gi~~i~~y~~~i~~-~--~g~~~~~~~~ 316 (486)
T PRK10077 241 RKIMGNTLATQALQEIKHSLDHGRKTGGRLLMFG-VGVIVIGVLLSVFQQFVGINVVLYYAPEIFK-T--LGASTDIALL 316 (486)
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H--CCCCCCHHHH
T ss_conf 9983983078999999999999887544777514-2999999999999999815459963999999-8--3998746999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHH---C--CHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Q ss_conf 899998764310011111100000000012455554567689962---2--336899999999999-9999999999999
Q gi|254780843|r 277 HTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSY---T--TGFISGWSLIAVGLF-NSIMFPTIFSLAS 350 (420)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~g~~-~~~~~~~~~~~~~ 350 (420)
....................||.+||.+.........+....... . ..........+...+ .....|..+....
T Consensus 317 ~~~~~~~~~~~~~~~~~~lvdr~GRR~lli~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~gp~~~~~~s 396 (486)
T PRK10077 317 QTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLS 396 (486)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999998877999999987253877999999999999999999998853141899999999999999879899884238
Q ss_pred HHHHHHHHHHH-HHH-HHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 63015656999-999-99999999999999999------9961237999999999999999999853111020
Q gi|254780843|r 351 ASLEDQASGGS-GII-CTTISGGVIIPLGVGYL------VDIASLRDAMFVPAVCYIIIAIYGIYCCYKENNF 415 (420)
Q Consensus 351 ~~~~~~~~~~~-~~~-~~~~~g~~i~p~i~G~l------~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (420)
|..|.+.+..+ ++. ....+++.+.+.....+ .+..+...+|++.+.+.++..++..+..++.|+.
T Consensus 397 EifPt~iR~~g~~i~~~~~~~~~~iv~~~~p~l~~~~~~~~~~~~~~~~~if~~~~~i~~~~~~~~~PETKGr 469 (486)
T PRK10077 397 EIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGK 469 (486)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHEEECCCCCC
T ss_conf 4166607999999999999999999999999999877677761316999999999999999986041279789
No 40
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=3.4e-32 Score=177.69 Aligned_cols=386 Identities=11% Similarity=0.008 Sum_probs=217.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH-CCCHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHCHHHHHHHH
Q ss_conf 5999999999999999987389989999-9980-999899999999-----99999999999999999852628999999
Q gi|254780843|r 10 QCTKIYIFILFFLFGGITSLNSILVPKL-QNSF-SLTYLQAMLVEA-----IFFSCYFFFSIPAGMFIQRYGYIKGICTG 82 (420)
Q Consensus 10 ~~~~i~i~~~ff~~g~~~~~~~~~~p~l-~~~~-~~s~~~~g~i~s-----~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~ 82 (420)
|...+.-.+-.++--+|..+.+.+.+.+ .+.| .-++...+++.+ +-++...+++++.|++.||+|||+++.++
T Consensus 21 rr~~~a~~~G~~lE~yDf~iy~~~a~~i~~~~FFp~~~~~~~ll~~~~~fa~gfl~RPlGg~ifG~~gDr~GRk~~L~~s 100 (438)
T PRK09952 21 RRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAMGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLT 100 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_conf 59999999888999999999999999997872499999079999999999999998758999999999730339999999
Q ss_pred HHHHHHHHHCCHHCCCCCHHHH-----HHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHH
Q ss_conf 9976432100000013202467-----89998877756788876531000012303578877664431100003454788
Q gi|254780843|r 83 LLIMSLGCILFTATIEITTFKV-----FLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYI 157 (420)
Q Consensus 83 ~~~~~i~~ll~~~a~~~~~~~~-----~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 157 (420)
.+++++++.++++.++.++... +.+.|+++|++.|...+....++.|..|+++|+...++.+.+...|..++..+
T Consensus 101 i~~m~~~T~lig~lPty~~IGi~ApilLv~~R~lQGl~~GGE~~~a~~~~~E~~p~~~Rg~~~s~~~~~~~~G~llas~~ 180 (438)
T PRK09952 101 VWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGL 180 (438)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHH
T ss_conf 99999999999974768988889999999999997888761288999999996887773244049999889999999999
Q ss_pred HHHHHHCC-------CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCC
Q ss_conf 88864123-------42046776555557789888642001121100134555543210123101233210001111222
Q gi|254780843|r 158 GSVLMLGN-------LASPNTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDI 230 (420)
Q Consensus 158 ~~~l~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (420)
...+.... .+|+..+.......... ..++. ...+...- ++ +++++++++.+....+..
T Consensus 181 ~~~l~~~l~~~~~~~wGWRipFlig~l~~li~----l~iR~-----~l~Esp~f---~~-~~~~~~~~~~~~p~~e~~-- 245 (438)
T PRK09952 181 VSLISMMTTDEQFLSWGWRIPFLFSIVLVLIA----LWVRN-----GMEESAEF---EQ-QQHEQAAAKKRIPVIEAL-- 245 (438)
T ss_pred HHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHH----HHHHH-----HCCCCHHH---HH-HHHHCCCCCCCCCHHHHH--
T ss_conf 99999836888885314299999999999999----99998-----27888789---99-876233443346699999--
Q ss_pred CCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHH
Q ss_conf 11111110001-11000135567789999875420122210124688899998764310011111100000000012455
Q gi|254780843|r 231 LANPRFTMGAV-CIFLYVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFA 309 (420)
Q Consensus 231 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
.+++....... .........+....+.+.|..... +.+......................+++.||+++++......
T Consensus 246 ~~~~~~~l~~~~l~~~~~~~~y~~~~~~~~y~~~~l--~~~~~~~~~~~~i~~~i~~~~~~~~G~LsDriGRr~~~~~~~ 323 (438)
T PRK09952 246 LRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNL--GLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGA 323 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 986599999999999999999999999999999872--888999999999999999999999999999836349999999
Q ss_pred HHHHHHHHH---HHHCCH-HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 554567689---962233-6899-99999999999999999999996301565699---999999999999999999999
Q gi|254780843|r 310 TTACSLVIL---SSYTTG-FISG-WSLIAVGLFNSIMFPTIFSLASASLEDQASGG---SGIICTTISGGVIIPLGVGYL 381 (420)
Q Consensus 310 ~~~~~~~~~---~~~~~~-~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~i~p~i~G~l 381 (420)
....+.... ...... .... ....+.++..+..++...+...|.+|.+.+.. -+++....+++...|.+..++
T Consensus 324 l~~~l~~~p~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~ElFPt~vR~TG~g~~Ynig~~i~Gg~aP~i~~~L 403 (438)
T PRK09952 324 LIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAAL 403 (438)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999998438689999999999999999998899999998688605576899999999999999999999999
Q ss_pred HHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 9961237---99999999999999999985311102
Q gi|254780843|r 382 VDIASLR---DAMFVPAVCYIIIAIYGIYCCYKENN 414 (420)
Q Consensus 382 ~d~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (420)
.+.++-+ .++++.. ..++.+...+..|+.||
T Consensus 404 ~~~~~~~~~~~a~y~~~--~~~i~l~~~l~~r~~~~ 437 (438)
T PRK09952 404 VTYFGGSWHSVAIYLLA--GCLISAMTALLMKDNQR 437 (438)
T ss_pred HHHHCCCCHHHHHHHHH--HHHHHHHHHHHCCCCCC
T ss_conf 99768994799999999--99999999998055579
No 41
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=1.3e-30 Score=169.78 Aligned_cols=392 Identities=13% Similarity=0.072 Sum_probs=257.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
Q ss_conf 11200599999999999999998738998999999809998999999999999999999999999985262899999999
Q gi|254780843|r 5 IARNIQCTKIYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLL 84 (420)
Q Consensus 5 ~~k~~~~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~ 84 (420)
+.||..+.++...-.+-..| +++....+|.+.-|..-|..+.|++..+..+...+.+++.|.++||++|||+++.+-.
T Consensus 13 Lr~nr~Fr~l~~~~~~S~lG--~~~~~iAl~~~v~~~TgS~~~~glv~~~~~lp~ll~~~~~GvlaDR~~Rr~vmi~~~~ 90 (416)
T PRK10489 13 LKTHPAFRAVFLARFISIVS--LGLLGVAVPVQIQMMTHSTWQVGLSVTLTGGAMFVGLMVGGVLADRYERKKVILLARG 90 (416)
T ss_pred HCCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 20492699999999999999--9999999999999885999999999999999999999999999994484299999999
Q ss_pred HHHHHHHCCHH--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 76432100000--0132024678999887775678887653100001230357887766443110000345478888864
Q gi|254780843|r 85 IMSLGCILFTA--TIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLM 162 (420)
Q Consensus 85 ~~~i~~ll~~~--a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 162 (420)
..++....... .....+.+.++...++.|+..+...|+..+.+.+..|+++..++.++.+...+.+...||.+++.++
T Consensus 91 ~~~~~~~~l~~~~~~~~~~~~~l~~~~~l~g~~~a~~~pA~~a~lp~lV~~~~L~~Anal~~~~~~~~~iiGP~lgG~li 170 (416)
T PRK10489 91 TCGIGFIGLCLNALLPEPSLLAIYLLGLWDGFFASLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPMIGGLLL 170 (416)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999998173409999999999999988888999999998447898999999999999999898648899999
Q ss_pred HCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 12342046776555557789888642001121100134555543210123101233210001111222111111100011
Q gi|254780843|r 163 LGNLASPNTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVC 242 (420)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (420)
................ .......... + +.+++++++++..++..+......+++........
T Consensus 171 ~~~g~~~~~~i~a~~~---~~s~~~l~~l-----------~----~~~~~~~~~~~~~~~~~eG~r~l~~~~~l~~~~l~ 232 (416)
T PRK10489 171 ATGGVAWNYGLAAAGT---FITLLPLLRL-----------P----ALPPPPQPREHPLRSLLAGFRFLLASPLVGGIALL 232 (416)
T ss_pred HHHCHHHHHHHHHHHH---HHHHHHHHHC-----------C----CCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHH
T ss_conf 8713349999999999---9999999718-----------7----78999888875478999999999817799999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 10001355677899998754201222101246888999987643100111111000000000124555545676899622
Q gi|254780843|r 243 IFLYVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYT 322 (420)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (420)
. .............+.+ .+..+.+....+...+....+...+........++.++.+...................
T Consensus 233 ~-~~~~~~~~~~~l~p~~---~~~l~~~~~~~G~l~aa~gvG~llG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (416)
T PRK10489 233 G-GLLTMASAVRVLYPAL---ADNWQMSAAQIGLLYAAIPLGAAIGALTSGWLAHSRRPGLLMLLSTLGSFLAIGLFGLM 308 (416)
T ss_pred H-HHHHHHHHHHHHHHHH---HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9-9999999999999999---99808987899999999999999999999985245663899999999999999999861
Q ss_pred -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf -3368999999999999999999999999630156-5699999999-999999999999999996123799999999999
Q gi|254780843|r 323 -TGFISGWSLIAVGLFNSIMFPTIFSLASASLEDQ-ASGGSGIICT-TISGGVIIPLGVGYLVDIASLRDAMFVPAVCYI 399 (420)
Q Consensus 323 -~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~g~~i~p~i~G~l~d~~g~~~~~~~~~~~~~ 399 (420)
+.+.......+.|++.+.......+...+..|++ .+++.+...+ ...+..+++.+.|++.|..|.+.++.++.+..+
T Consensus 309 ~~~~~~~~~~~~~G~~~~~~~v~~~t~iQ~~~P~~~rGRV~s~~~~~~~~~~plG~~~~G~la~~~G~~~~~~~~g~~~~ 388 (416)
T PRK10489 309 PMWILGVACLALFGWLSAISSLLQYTLLQTQTPEAMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLA 388 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 59999999999999999999999999999859999875999999999999899899999999999778999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCC
Q ss_conf 999999985311102012797
Q gi|254780843|r 400 IIAIYGIYCCYKENNFEQNTP 420 (420)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~P 420 (420)
++.........+-+|.+++.|
T Consensus 389 ~~~~~~~~~~~~~r~~~~~~~ 409 (416)
T PRK10489 389 IIGVLLLLVLGELRRFRQTPP 409 (416)
T ss_pred HHHHHHHHHCHHHCCCCCCCC
T ss_conf 999999997714203789998
No 42
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=3.6e-31 Score=172.54 Aligned_cols=386 Identities=11% Similarity=-0.016 Sum_probs=217.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHCHHHH
Q ss_conf 1120059999999999999999873899899999980-99989999999-----99999999999999999985262899
Q gi|254780843|r 5 IARNIQCTKIYIFILFFLFGGITSLNSILVPKLQNSF-SLTYLQAMLVE-----AIFFSCYFFFSIPAGMFIQRYGYIKG 78 (420)
Q Consensus 5 ~~k~~~~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~-~~s~~~~g~i~-----s~~~~~~~i~~~~~G~l~Dr~Grr~~ 78 (420)
-.|+.++..+.-.+--++--+|..+.+.+.|.+.+.| --++...+++. ++-++...+++++.|++.||+|||++
T Consensus 16 ~~r~~~~~i~a~~~G~~~E~yDf~iy~~~a~~i~~~FFp~~~~~~~ll~t~~~fa~gf~~RPlG~iifG~igDr~GRk~~ 95 (432)
T PRK10406 16 DTRRRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKS 95 (432)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
T ss_conf 38999999999997479999999999999999999608999936999999999999999886699999998873010999
Q ss_pred HHHHHHHHHHHHHCCHHCCCCCHH-----HHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHH
Q ss_conf 999999764321000000132024-----678999887775678887653100001230357887766443110000345
Q gi|254780843|r 79 ICTGLLIMSLGCILFTATIEITTF-----KVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAI 153 (420)
Q Consensus 79 l~~~~~~~~i~~ll~~~a~~~~~~-----~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 153 (420)
+.++++++++++.+.++.++.++. ..+.++|+++|++.|...+...+++.|..|+++|+...++.+.+...|..+
T Consensus 96 l~~si~lm~i~T~lig~lPty~~IGi~ApilLvl~RllQG~~~GGE~~ga~~~l~E~ap~~rRG~~~s~~~~g~~~G~ll 175 (432)
T PRK10406 96 MLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLL 175 (432)
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHH
T ss_conf 99999999999999994885888788999999999999998615758999999998477777135530999999999999
Q ss_pred HHHHHHHHHHCC-------CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCC
Q ss_conf 478888864123-------4204677655555778988864200112110013455554321012310123321000111
Q gi|254780843|r 154 FPYIGSVLMLGN-------LASPNTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLK 226 (420)
Q Consensus 154 g~~~~~~l~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (420)
+..+...+.... .+|+..+......... ..+++... .+ .+ +.+++.+++...
T Consensus 176 a~~v~~~l~~~l~~~~~~~wGWRipFlig~i~~li----~l~lR~~l-----~E--------s~----~~~~~~~~~~~~ 234 (432)
T PRK10406 176 ALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVV----ALWLRRQL-----DE--------TS----QQETRALKEAGS 234 (432)
T ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH----HHHHHHCC-----CC--------CH----HHHHHCCCCCCC
T ss_conf 99999999740682222251099999999999999----99999727-----77--------82----678630455553
Q ss_pred CCCCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHH
Q ss_conf 12221111111000-11100013556778999987542012221012468889999876431001111110000000001
Q gi|254780843|r 227 TLDILANPRFTMGA-VCIFLYVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTL 305 (420)
Q Consensus 227 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (420)
.+...+++...... ..........+....+.+.|..... +.+......................+.+.||+++++..
T Consensus 235 ~~~l~~~~~~~l~~~~~~~~~~~~~y~~~~~~~t~l~~~~--~~~~~~~~~~~~~~~~~~~i~~~l~G~LsDriGRr~~~ 312 (432)
T PRK10406 235 LKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTA--GMHANVASGIMTAALFVFMLIQPLFGALSDKIGRRTSM 312 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
T ss_conf 7999873599999999999999999999999999998755--99889999999999999999999999999884732999
Q ss_pred HHHHHHHHHHHHH--HHH--CCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
Q ss_conf 2455554567689--962--233689999999999-99999999999999630156569---999999999999999999
Q gi|254780843|r 306 CAFATTACSLVIL--SSY--TTGFISGWSLIAVGL-FNSIMFPTIFSLASASLEDQASG---GSGIICTTISGGVIIPLG 377 (420)
Q Consensus 306 ~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~i~p~i 377 (420)
........+.... ... ............... ..+...+.......|.+|.+.+. .-+.+....+++...|.+
T Consensus 313 ~~~~~~~~~~~~p~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~aElFPt~vR~tG~g~~Yni~~~l~GG~aP~I 392 (432)
T PRK10406 313 LCFGSLATIFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYV 392 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999973875999999999999999998789999999868860555588799999999999999999
Q ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 9999996123799--9999999999999999853111020
Q gi|254780843|r 378 VGYLVDIASLRDA--MFVPAVCYIIIAIYGIYCCYKENNF 415 (420)
Q Consensus 378 ~G~l~d~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (420)
.-++. .+|...+ +++.. +.++..+..+...||.|..
T Consensus 393 a~~L~-~~g~~~~~~~Y~~~-~a~i~~i~~l~l~r~~kg~ 430 (432)
T PRK10406 393 ALSLK-SIGMETAFFWYVTL-MAVVAFLVSLMLHRKGKGM 430 (432)
T ss_pred HHHHH-HHCCCCHHHHHHHH-HHHHHHHHHHHHEECCCCC
T ss_conf 99999-84997389999999-9999999999840056999
No 43
>TIGR00883 2A0106 MFS transporter, metabolite:H+ symporter (MHS) family protein; InterPro: IPR004736 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognized and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated . The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified . Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognized MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found . Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 prove to be a characteristic of virtually all of the more than 300 MFS proteins identified. This entry represents the metabolite-H(+) symport (MHS) subfamily of the MFS. Members include citrate-proton symporters , alpha-ketoglutarate permease , shikimate transporters , and the proline/betaine transporter ProP .; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=100.00 E-value=1.8e-31 Score=174.11 Aligned_cols=373 Identities=15% Similarity=0.040 Sum_probs=239.8
Q ss_pred HHHHHHHHHHHHHHHH-H-CCCHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCC
Q ss_conf 9987389989999998-0-999899999-----99999999999999999999852628999999997643210000001
Q gi|254780843|r 25 GITSLNSILVPKLQNS-F-SLTYLQAML-----VEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATI 97 (420)
Q Consensus 25 ~~~~~~~~~~p~l~~~-~-~~s~~~~g~-----i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~ 97 (420)
||..+++..-..+-++ | +-++...+. +.++-|+...+|+.+.|++.||+||||+++++++++++++++.++-+
T Consensus 7 fDF~lYg~~A~lvf~~~Ffp~~dp~~~~~~~~atFa~gFl~RP~Gg~~FG~~GDr~GRk~~L~~tl~~Mg~~T~~IGLlP 86 (413)
T TIGR00883 7 FDFYLYGFAAVLVFNTFFFPSGDPLVALLATFATFAVGFLARPLGGIVFGHFGDRIGRKKTLVITLLMMGIGTVLIGLLP 86 (413)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 87899999999973002789888278999999999999999889999998863235469999999999857665312247
Q ss_pred CCCHH-----HHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHH
Q ss_conf 32024-----6789998877756788876531000012303578877664431100003454788888641234204677
Q gi|254780843|r 98 EITTF-----KVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTS 172 (420)
Q Consensus 98 ~~~~~-----~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~ 172 (420)
+..+. .++...|++||++.|..+..+..+..|..|++||+-.-+..+.+..+|..++......+......... .
T Consensus 87 sY~~IG~~APiLL~~~Rl~QGfs~GGE~gGaa~~~~E~A~~gkRG~~gSf~~~g~~~G~llA~l~~~~~s~~~~~~~P-~ 165 (413)
T TIGR00883 87 SYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLVESAPPGKRGFYGSFQQVGAPVGLLLAALVVLLLSYLLGDEAP-L 165 (413)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-H
T ss_conf 601177899999999999843567899999999999750022037888899986789999999999999997266520-3
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 65555577898886420011211001345555432101231012332100011112221111111000111000135567
Q gi|254780843|r 173 MLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYVGAEVA 252 (420)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (420)
..|.+...+...........++.....+....+ .++++++.+..+++.........+.+..........+.....+.
T Consensus 166 ~~WGWRiPFl~s~~l~~~gL~lR~~L~Et~~f~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~fY~ 242 (413)
T TIGR00883 166 LEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFE---KAQEKHKTRTGKKRIPLAELLTKHRKAFLLVLGLVIATTTTFYL 242 (413)
T ss_pred HHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH---HHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_conf 310314589999999999999816564577999---98852125303767409999872229999999999998999999
Q ss_pred HHHHHHHHHHHHCC---------CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHH--HHH
Q ss_conf 78999987542012---------2210124688899998764310011111100000000012455554567689--962
Q gi|254780843|r 253 IGSIMANYLMRHDT---------LHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVIL--SSY 321 (420)
Q Consensus 253 ~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 321 (420)
...+.+.|...... ++.+............+......++.+.++||++||+.++.......+.... ...
T Consensus 243 ~t~y~~~Y~~~~~~vsEAGYA~GLg~~~~~~~~~~~~~~i~~~~~~P~~G~LsDriGRR~~~i~~~~~~~~~~~p~l~~l 322 (413)
T TIGR00883 243 ITTYLPTYLTTTLGVSEAGYALGLGLSANSALLVLMLSLILFFVVIPLSGALSDRIGRRRVLIIFTVLAALLAVPLLMAL 322 (413)
T ss_pred HHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999998865167514568773268766899999999999999999999997553653999999999999999999987
Q ss_pred C-CH--HHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Q ss_conf 2-33--6899999--99999999999999999996301565---699999999999999999999999996123-79999
Q gi|254780843|r 322 T-TG--FISGWSL--IAVGLFNSIMFPTIFSLASASLEDQA---SGGSGIICTTISGGVIIPLGVGYLVDIASL-RDAMF 392 (420)
Q Consensus 322 ~-~~--~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~i~p~i~G~l~d~~g~-~~~~~ 392 (420)
. .. ....... ....+..+..+....+...|.+|.+. +.+-+....+.+|+.+.|.+...+.+.++- ..+..
T Consensus 323 ~~~~y~~~~~~~~~~~~~~~i~~~~~g~~~~~~~ElFPt~vR~~G~~l~y~~A~~~~GG~aP~iA~~L~~~~~~~~~~~g 402 (413)
T TIGR00883 323 LDSGYSPFTLVFFLLLGLALIGGMYTGPMGSLLPELFPTEVRYTGASLAYNLAGAIGGGLAPYIAAALVAITGDDLYAIG 402 (413)
T ss_pred HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
T ss_conf 41787689999999999999999878769998772334407899887999999998656899999999972178874389
Q ss_pred HHHHHHHHH
Q ss_conf 999999999
Q gi|254780843|r 393 VPAVCYIII 401 (420)
Q Consensus 393 ~~~~~~~~~ 401 (420)
....+.+++
T Consensus 403 ~yl~~~a~~ 411 (413)
T TIGR00883 403 YYLAALALI 411 (413)
T ss_pred HHHHHHHHH
T ss_conf 999999997
No 44
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter; InterPro: IPR004745 Na(+)-dependent inorganic phosphate cotransporter proteins belong to this group. The mammalian proteins are important for the resorption of phosphate by the kidney and may be involved in actively transporting phosphate into cells via sodium ion cotransport in the renal brush border membrane.; GO: 0015114 phosphate transmembrane transporter activity, 0006817 phosphate transport, 0016021 integral to membrane.
Probab=100.00 E-value=5.6e-34 Score=186.63 Aligned_cols=382 Identities=15% Similarity=0.108 Sum_probs=281.9
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCCCCHHHH-HHHHHHHH
Q ss_conf 99999980999899999999999999999999999998526289999999976432100000013202467-89998877
Q gi|254780843|r 34 VPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATIEITTFKV-FLIALCIL 112 (420)
Q Consensus 34 ~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~~~~~~~-~~~~~~i~ 112 (420)
+|+=.++|++|..+.|.+.|.++.|+.+.++|.|+++||||.|+++..++.+..+.+++...++.. ++.+ +.++|+++
T Consensus 80 ipy~~~~f~Ws~~~QG~ilSS~fyG~~~~qiP~G~la~~Y~~k~~iG~~~~~~~v~~~liP~aA~~-g~~~G~~~~Rv~q 158 (514)
T TIGR00894 80 IPYKNPEFNWSEDQQGLILSSFFYGSVIIQIPVGYLAGKYGTKKVIGFALLLSSVLSFLIPIAAGV-GFAWGVIVLRVLQ 158 (514)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHEEEEEECCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHC-CCCEEEEEEEEHH
T ss_conf 666888847867763688756666125234160356314043799999999999999874655412-1011023453212
Q ss_pred HHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC-----CCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 75678887653100001230357887766443110000345478888864123-----4204677655555778988864
Q gi|254780843|r 113 AIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGN-----LASPNTSMLADTMKDYQTDTAR 187 (420)
Q Consensus 113 g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 187 (420)
|.+.|...|+...+...|.||+||++..+...++..+|..+..++.|.+.+.. ++|...+.............|.
T Consensus 159 G~~~G~~~p~~h~l~~KW~PP~ER~r~~s~~~sG~~~G~~i~lp~~G~i~~~~GskF~~GWP~vFYifGivG~~~~~~W~ 238 (514)
T TIGR00894 159 GIGQGLVSPAQHELLAKWIPPNERSRLTSAVLSGFQLGTFIVLPISGLICESDGSKFLLGWPMVFYIFGIVGTAVSIAWF 238 (514)
T ss_pred HHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 01233114643022663058875057999986268898999986304555356740147761467788999999999989
Q ss_pred HHCCC-CCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 20011-21100134555543210123101233210001111222111111100011100013556778999987542012
Q gi|254780843|r 188 VISQM-YLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYVGAEVAIGSIMANYLMRHDT 266 (420)
Q Consensus 188 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (420)
..... ..........+.......-.++...++.++...+.+...+.+..|......+...........+.|.|.....
T Consensus 239 ~l~~D~P~~HP~is~~Ek~YI~~sL~~~~~~krn~r~~~P~KAi~kS~P~W~~~~a~~~~~w~~~~l~~~~P~f~~~~L- 317 (514)
T TIGR00894 239 VLVYDDPSDHPCISESEKKYINSSLVQQVSSKRNSRQSLPIKAILKSLPVWAIVFASFGHIWGLNTLMTYLPTFISSVL- 317 (514)
T ss_pred HHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_conf 8731375457423357899998877752012225789884456565459999999987533078999997779998873-
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHH---------HCCCHHHHHHHHHH-HHHHHHHHCC---HH-HHHHHHH
Q ss_conf 221012468889999876431001111110000---------00000124555545-6768996223---36-8999999
Q gi|254780843|r 267 LHLDGISAGQHTAIYWGSAMIGRFIGTWILSRF---------SAEKTLCAFATTAC-SLVILSSYTT---GF-ISGWSLI 332 (420)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~-~~~~~~~~~~---~~-~~~~~~~ 332 (420)
+.+....|++.+.......+...+.+...|.. ..||+....+...- +......+.. .. ...+.+.
T Consensus 318 -~~~~~~nGlLSsLPyL~~~l~~~~~~~~AD~l~~~~~ls~t~~RKl~t~ig~~~~~~~~~al~Y~snl~~~~~~i~~L~ 396 (514)
T TIGR00894 318 -HVNIRENGLLSSLPYLLAWLCGVLASQLADYLLSRKILSLTAVRKLFTFIGLLGPGIFVVALPYLSNLYNAYSTIIILT 396 (514)
T ss_pred -CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf -4653125404367999999999999987589871465026778899999998889999999998868989999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHH-HHHH
Q ss_conf 99999999999999999963015656999999-999999999999999999961------237999999999999-9999
Q gi|254780843|r 333 AVGLFNSIMFPTIFSLASASLEDQASGGSGII-CTTISGGVIIPLGVGYLVDIA------SLRDAMFVPAVCYII-IAIY 404 (420)
Q Consensus 333 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~i~p~i~G~l~d~~------g~~~~~~~~~~~~~~-~~~~ 404 (420)
+.....+...+....-..|..|++.+...++. ..+..+|.+.|.++|.+.+.- .|+..|.+++...+. ..+|
T Consensus 397 lA~~~~g~~~~G~lin~lDLaP~y~Gf~~g~~~~~g~~~Gl~~~~~~G~~l~~~~~pv~~~W~~vF~l~a~~~~~~~ifY 476 (514)
T TIGR00894 397 LANALAGFVLSGVLINALDLAPRYAGFIKGVTTLIGSLGGLISSTLAGQLLSQDSKPVISAWKKVFLLMAFVNVISGIFY 476 (514)
T ss_pred HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98763001000078888762257899999999999878878999999986248894047777999999999999878885
Q ss_pred HHHHHHHHHCCCCC
Q ss_conf 99853111020127
Q gi|254780843|r 405 GIYCCYKENNFEQN 418 (420)
Q Consensus 405 ~~~~~~~~~~~~~~ 418 (420)
.+|..-+++.|+|+
T Consensus 477 ~lf~~~e~q~Wa~~ 490 (514)
T TIGR00894 477 LLFASAEIQDWAKN 490 (514)
T ss_pred HHHCCCCCCCCHHC
T ss_conf 55302103620104
No 45
>KOG2533 consensus
Probab=100.00 E-value=4.8e-32 Score=176.94 Aligned_cols=373 Identities=14% Similarity=0.065 Sum_probs=241.3
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHH
Q ss_conf 38998999999809998999999999999999999999999985262899999999764321000000132024678999
Q gi|254780843|r 29 LNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATIEITTFKVFLIA 108 (420)
Q Consensus 29 ~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~~~~~~~~~~~ 108 (420)
+....+-.+++|.+....|.+.+.++|+++|+++++|+|.|.||++..+.+....+.+++-.++... .++++.+.+.
T Consensus 64 i~~a~l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~---~~s~~~~ial 140 (495)
T KOG2533 64 IVNASLSGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAA---VHSFPGLIAL 140 (495)
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH---HHCHHHHHHH
T ss_conf 2078771874014511326768689999999999856999987478789999999999999999998---8356899999
Q ss_pred HHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-----CCCCCHHHHHHHHHHHHHHH
Q ss_conf 8877756788876531000012303578877664431100003454788888641-----23420467765555577898
Q gi|254780843|r 109 LCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLML-----GNLASPNTSMLADTMKDYQT 183 (420)
Q Consensus 109 ~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~ 183 (420)
|++.|+.++..+|+...++..|+.+++|+..++++.+...+|.+.|.++...+.. ...+|++.....+.......
T Consensus 141 r~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~g 220 (495)
T KOG2533 141 RFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLG 220 (495)
T ss_pred HHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 99999987146169999998753814554788999983624568899999888874367776661047999999999988
Q ss_pred HHHHHHCCCCCCCHHHHHHHHHH----HHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88642001121100134555543----21012310123321000111122211111110001110001355677899998
Q gi|254780843|r 184 DTARVISQMYLVLAIILFLATWL----CWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYVGAEVAIGSIMAN 259 (420)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (420)
.......+...... ......+ .+..++......+++.+.....+..+.+..+......++..........|.+.
T Consensus 221 i~~f~~lp~~P~~~--~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl 298 (495)
T KOG2533 221 IVVFFFLPDNPSKA--WFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPL 298 (495)
T ss_pred HHEEEEECCCHHCC--CCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 74368816981006--6676366542245665345666544447899999990637799999999998637307889999
Q ss_pred HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHH----HCCCHHHHHHHHHHHHH-HHHHHCC-HHHHHHHHHH
Q ss_conf 7542012221012468889999876431001111110000----00000124555545676-8996223-3689999999
Q gi|254780843|r 260 YLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRF----SAEKTLCAFATTACSLV-ILSSYTT-GFISGWSLIA 333 (420)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~ 333 (420)
+... ..+.+..+...+........+++....+...||. .++........+..... ....... ..........
T Consensus 299 ~l~~--~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~ 376 (495)
T KOG2533 299 YLKS--NGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLAAAVLPGAYGAFLI 376 (495)
T ss_pred HHHC--CCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 9873--79857555000063899989999999999999875124689999999999999999999870222688899987
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999996301565---6999999999999999999-999999961237999-99999999999999985
Q gi|254780843|r 334 VGLFNSIMFPTIFSLASASLEDQA---SGGSGIICTTISGGVIIPL-GVGYLVDIASLRDAM-FVPAVCYIIIAIYGIYC 408 (420)
Q Consensus 334 ~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~i~p~-i~G~l~d~~g~~~~~-~~~~~~~~~~~~~~~~~ 408 (420)
...+.....+.......+....++ ...+........++.+.|. ..+....++++...+ .+...|.....+...+.
T Consensus 377 ~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~~~~~~~~~~~~~v~~~ 456 (495)
T KOG2533 377 GPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVFYMLVAACVGIVLLLVILF 456 (495)
T ss_pred HHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 03400178999998513044775432355578898776887745654444238754454035689999999999999999
No 46
>TIGR00892 2A0113 monocarboxylate transporter; InterPro: IPR004743 Proton-linked monocarboxylate transporters catalyse the rapid transport across the plasma membrane of many monocarboxylates such as lactate, pyruvate, branched-chain oxo acids derived from leucine, valine and isoleucine, and the ketone bodies acetoacetate, beta-hydroxybutyrate and acetate.; GO: 0015355 secondary active monocarboxylate transmembrane transporter activity, 0015711 organic anion transport, 0016021 integral to membrane.
Probab=100.00 E-value=7.2e-32 Score=176.04 Aligned_cols=392 Identities=11% Similarity=0.027 Sum_probs=266.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
Q ss_conf 2005999999999999999987---3899899999980999899999999999999999999999998526289999999
Q gi|254780843|r 7 RNIQCTKIYIFILFFLFGGITS---LNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGL 83 (420)
Q Consensus 7 k~~~~~~i~i~~~ff~~g~~~~---~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~ 83 (420)
..--|.|+.+..+|...||++. .+++...++++||+.|++|++|+.|+.....--+.|++..|.+|||.|+++++|.
T Consensus 19 PDGGWGWvVl~a~fv~~GfsYaFPkav~VFF~El~~~F~a~~Se~aWiSSImLAvlY~~GP~sSiLVn~fG~RPv~~~GG 98 (475)
T TIGR00892 19 PDGGWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGG 98 (475)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHH
T ss_conf 68745789988999987652023654511248888861789762025768999998666983345567878459999879
Q ss_pred HHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 97643210000001320246789998877756788876531000012303578877664431100003454788888641
Q gi|254780843|r 84 LIMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLML 163 (420)
Q Consensus 84 ~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 163 (420)
++.+.|.++..++.+... +.+..-++.|.|.++-.....+++..++. +||..+.++..++..+.-..-+.+...+.+
T Consensus 99 lLas~GmilASFs~~~~e--LYlT~G~itGLGlAfnlqPsLt~lG~YF~-rrRPLANGLA~aGsPvFLS~L~Pl~q~L~~ 175 (475)
T TIGR00892 99 LLASLGMILASFSSNVLE--LYLTAGFITGLGLAFNLQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFE 175 (475)
T ss_pred HHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CCCHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 998668999998647999--99998888878898732046877323245-445357888861762378765678899876
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHH--------------HHHHCCCCCCCC
Q ss_conf 234204677655555778988864200112110013455554321012310123--------------321000111122
Q gi|254780843|r 164 GNLASPNTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADH--------------KRNHISFLKTLD 229 (420)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~ 229 (420)
..+|...+....................... . .....+.++..++..+.++. ..++.++.-...
T Consensus 176 ~fGWrG~FLilGGllLhcC~aGa~mRP~~~~-~-~~~k~~~K~~~~~~~~S~~~~~~~~g~~~~~k~~~~~~~~~~LDf~ 253 (475)
T TIGR00892 176 SFGWRGSFLILGGLLLHCCVAGALMRPVGPS-Q-RQSKSKSKEGLPEDGKSDENIDLIDGTKKLSKKSTAEKINKFLDFS 253 (475)
T ss_pred HCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC-C-CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 1585047899999999877614210678788-7-6643225788887786401221147851023235689988877577
Q ss_pred CCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHH--HCCC--H
Q ss_conf 2111-111100011100013556778999987542012221012468889999876431001111110000--0000--0
Q gi|254780843|r 230 ILAN-PRFTMGAVCIFLYVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRF--SAEK--T 304 (420)
Q Consensus 230 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~ 304 (420)
..++ +.+...................++.. +.++.+.+...++.+.+......+..|+..+....+. +++. .
T Consensus 254 ~f~hnrGF~vY~~g~~~~~LGlF~P~ifL~p---YAkd~gv~~~~AAfLLSi~gF~DifaRP~~Gl~Ag~~~~rP~~~Yl 330 (475)
T TIGR00892 254 LFTHNRGFLVYLSGNVIMFLGLFVPIIFLVP---YAKDKGVDEYEAAFLLSIIGFVDIFARPSVGLIAGLKLIRPRVQYL 330 (475)
T ss_pred HHHCCCCEEEHHHHHHHHHHHCCCHHHHCCC---CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
T ss_conf 6417872362278899999720110333475---2125689767789999999998888866668761752201146789
Q ss_pred HHHHHHHHHHHHHHHHHCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 1245555456768996223368-999999999999999999999999630156--5699999999999999999999999
Q gi|254780843|r 305 LCAFATTACSLVILSSYTTGFI-SGWSLIAVGLFNSIMFPTIFSLASASLEDQ--ASGGSGIICTTISGGVIIPLGVGYL 381 (420)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~i~p~i~G~l 381 (420)
.......-.++-++......+. ..+.....|+.++.+.+.++...+|.+|.. .++.+-....-...-.++||++|.+
T Consensus 331 FS~A~l~nGlt~L~ca~a~~Y~~LV~y~~~FG~sfG~vgal~Fe~LMd~VG~~rFssA~GLvt~ve~~avL~GPPlAG~L 410 (475)
T TIGR00892 331 FSLALLFNGLTHLLCALASDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRL 410 (475)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHH
T ss_conf 99999985178886130137401125777897688889999999987305874451578899999534653286236788
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHH
Q ss_conf 99612-37999999999999999999
Q gi|254780843|r 382 VDIAS-LRDAMFVPAVCYIIIAIYGI 406 (420)
Q Consensus 382 ~d~~g-~~~~~~~~~~~~~~~~~~~~ 406 (420)
.|.++ |+..|+.+....+..++|..
T Consensus 411 ~D~~~~Y~y~f~~~G~~v~~aglfl~ 436 (475)
T TIGR00892 411 VDATKNYKYIFYASGSIVVLAGLFLA 436 (475)
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 56644535678899899999999999
No 47
>pfam05977 DUF894 Bacterial protein of unknown function (DUF894). This family consists of several bacterial proteins, many of which are annotated as putative transmembrane transport proteins.
Probab=100.00 E-value=1.7e-28 Score=159.12 Aligned_cols=383 Identities=15% Similarity=0.099 Sum_probs=264.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
Q ss_conf 20059999999999999999873899899999980999899999999999999999999999998526289999999976
Q gi|254780843|r 7 RNIQCTKIYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIM 86 (420)
Q Consensus 7 k~~~~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~ 86 (420)
|+..+..+.+..+.- .+.+++..+....+.-|+.-|....|+++.+.++...+.++++|.++||+.|||+++.+-...
T Consensus 8 r~~~FR~lw~a~lvS--~~Gtwmq~VA~~Wlv~~lT~S~~~vglV~~a~~LP~~ll~l~aGvlADr~dRRr~ll~~q~~~ 85 (524)
T pfam05977 8 RNGTFRWIWIASLVS--NLGWLMQTVAASWLMTDISASPLMVALVQAAATLPIFLLSIPAGAIADNFDRRKVMLAGQLLM 85 (524)
T ss_pred CCCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 772289999999999--999999999999998765089999999999999889999999999998225089999999999
Q ss_pred HHHHHCCHHC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
Q ss_conf 4321000000--13202467899988777567888765310000123035788776644311000034547888886412
Q gi|254780843|r 87 SLGCILFTAT--IEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLG 164 (420)
Q Consensus 87 ~i~~ll~~~a--~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 164 (420)
.+........ ....+.+.++...++.|++.+...|+..+.+.+..|+++...+.++.....+.+..+||.+++.++..
T Consensus 86 ~~~a~~La~l~~~g~~~~~~Ll~l~f~~G~~~A~~~PA~qA~vp~lVpr~~L~~AvALns~~~N~aR~iGPAlgG~Lia~ 165 (524)
T pfam05977 86 AIASALLTVLAALGLLSPWLLLAFTFLIGIGTALNDPAWQASVGDLVPRRDVPAAVALNSVGYNLARSVGPALGGLLVAA 165 (524)
T ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999859874999999999999999998789999999857997889899998589988999888999999997
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 34204677655555778988864200112110013455554321012310123321000111122211111110001110
Q gi|254780843|r 165 NLASPNTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIF 244 (420)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (420)
.+....+..............+.+-. ...+.....+...............++..........
T Consensus 166 ~G~~~~F~lnAlSyl~~i~~L~~~~~-----------------~~~~~~~p~e~~~~a~~~Glryv~~sp~lr~vl~~~~ 228 (524)
T pfam05977 166 FGAATAFAVNALSYFAVIVAIARWKR-----------------DVPPSPLPRENLFGALRAGLRYTAMSREIRSVLVRAA 228 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCC-----------------CCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf 72699999999999999999994787-----------------7889888887768899999999970966999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCH
Q ss_conf 00135567789999875420122210124688899998764310011111100000000012455554567689962233
Q gi|254780843|r 245 LYVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYTTG 324 (420)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (420)
.+..........+|.+.. +.++.+....+.+.+.+..+.+.+......+.+|.++.+++...................
T Consensus 229 ~~~~~~~~~~aLLPl~Ar--~~l~gga~~yGlLl~~~G~GAv~GAl~l~~lr~~~~~~~lv~~~~~~~a~~~~~la~~~~ 306 (524)
T pfam05977 229 AFGLSASAVWALLPLVAR--DLLGGDAGFYGILLGAFGAGAVLGALILSRLRRRLSSERLVLLASVGFALCCLSLALSPS 306 (524)
T ss_pred HHHHHHHHHHHHHHHHHH--HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCH
T ss_conf 999999999999999999--983798147899999999889999998898750157243899999999999999996518
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf -68999999999999999999999999630156-569999999999-999999999999999612379999999999999
Q gi|254780843|r 325 -FISGWSLIAVGLFNSIMFPTIFSLASASLEDQ-ASGGSGIICTTI-SGGVIIPLGVGYLVDIASLRDAMFVPAVCYIII 401 (420)
Q Consensus 325 -~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~g~~i~p~i~G~l~d~~g~~~~~~~~~~~~~~~ 401 (420)
+.....+.+.|++.-....+.+....-..|+. .+++.++..+.. -|.++|+.+.|.++|++|...+..+.+++.++.
T Consensus 307 ~~l~~~~l~~~G~awi~~lst~n~~vQ~~~P~wvRgR~lslY~~v~~Ggma~Gs~~WG~vA~~~g~~~aL~~aa~~l~~~ 386 (524)
T pfam05977 307 LWVAAIALLLGGACWITALSTLNVAVQLASPRWVVGRALSVYLTVFFGGMAAGSWLWGTVAEALGLTGALLLAAAALLAG 386 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 99999999999899999999998999970879999999999999998567888999999873007499999999999999
Q ss_pred HHHHHHHHH
Q ss_conf 999998531
Q gi|254780843|r 402 AIYGIYCCY 410 (420)
Q Consensus 402 ~~~~~~~~~ 410 (420)
........-
T Consensus 387 ~~~~~~~~l 395 (524)
T pfam05977 387 AALGLRLRL 395 (524)
T ss_pred HHHHHCCCC
T ss_conf 998712027
No 48
>KOG2504 consensus
Probab=99.98 E-value=8.7e-30 Score=165.61 Aligned_cols=389 Identities=15% Similarity=0.100 Sum_probs=247.9
Q ss_pred HHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
Q ss_conf 9999999999999999873---8998999999809998999999999999999999999999985262899999999764
Q gi|254780843|r 11 CTKIYIFILFFLFGGITSL---NSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMS 87 (420)
Q Consensus 11 ~~~i~i~~~ff~~g~~~~~---~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~ 87 (420)
|.++.+...|....+.+++ .+.+.++++++|+-+.+|++|+.|+....+.+..|+.+.+.||+|.|++.+.|.++.+
T Consensus 43 ~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~ 122 (509)
T KOG2504 43 WGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAA 122 (509)
T ss_pred EEHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 20196899999999765125324232899998728982068899999999998624067998876074488877889999
Q ss_pred HHHHCCHHCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
Q ss_conf 321000000132024678-9998877756788876531000012303578877664431100003454788888641234
Q gi|254780843|r 88 LGCILFTATIEITTFKVF-LIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNL 166 (420)
Q Consensus 88 i~~ll~~~a~~~~~~~~~-~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 166 (420)
+|.++..++. +++.+ ....++.|+|.++........+. .+.+++|+.+.++..++.++|..+-|.+...+....+
T Consensus 123 ~g~~lssF~~---~i~~l~lt~gvi~G~G~g~~~~paiviv~-~YF~kkR~lA~Gia~~GsGvG~~~~~~l~~~l~~~~G 198 (509)
T KOG2504 123 LGLLLSSFAT---SLWQLYLTFGVIGGLGLGLIYLPAVVILG-TYFEKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYG 198 (509)
T ss_pred HHHHHHHHHH---HHHHHHHHHHHHHCCCCHHHHCCHHHHHH-HHHHHHHHHHHHHEEECCCCEEEEHHHHHHHHHHHCC
T ss_conf 8999998884---79999999999833521533113899887-7767545445420122476346756789999988708
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH--------------HHHHHHHHHHC-CC-CC------CHHHHHHHC--
Q ss_conf 20467765555577898886420011211001--------------34555543210-12-31------012332100--
Q gi|254780843|r 167 ASPNTSMLADTMKDYQTDTARVISQMYLVLAI--------------ILFLATWLCWM-QR-NS------FADHKRNHI-- 222 (420)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~-~~-~~------~~~~~~~~~-- 222 (420)
|+.............................. ........... .. .. ....++.+.
T Consensus 199 wr~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (509)
T KOG2504 199 WRGALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKW 278 (509)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHCCCCE
T ss_conf 68999999999999999998307876566851444321320011033331110357778888766654405676068510
Q ss_pred -----CCCC---CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf -----0111---12221111111000111000135567789999875420122210124688899998764310011111
Q gi|254780843|r 223 -----SFLK---TLDILANPRFTMGAVCIFLYVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTW 294 (420)
Q Consensus 223 -----~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (420)
.... ..+..+++..+.......+..........+++.+. ...+.+........+......+.+|+..+.
T Consensus 279 ~~~~~~~~l~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~---~~~g~~~~~~a~l~sii~~~~i~gRi~~G~ 355 (509)
T KOG2504 279 RNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYA---KSLGLSSNDAAFLLSIIGVSDIIGRIILGL 355 (509)
T ss_pred ECCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEHHHH---HHCCCCHHHHHHHHHHHHHHCCCHHEEHHH
T ss_conf 01530000320207886155899999999999998763344408778---555984788999999998751206401265
Q ss_pred CCCHHHCCCHHH--HHHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHH
Q ss_conf 100000000012--4555545676899622336-899999999999999999999999963015--65699999999999
Q gi|254780843|r 295 ILSRFSAEKTLC--AFATTACSLVILSSYTTGF-ISGWSLIAVGLFNSIMFPTIFSLASASLED--QASGGSGIICTTIS 369 (420)
Q Consensus 295 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 369 (420)
+.|+...++... .......+........... .......+.|++.+...........+..+. ...+.+.......+
T Consensus 356 laD~~~~~~~~~~~~~l~~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi 435 (509)
T KOG2504 356 LADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGI 435 (509)
T ss_pred HCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 51676301579899999999999998861357899999999998524478875668999863987503699999999899
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999612-37999999999999999999
Q gi|254780843|r 370 GGVIIPLGVGYLVDIAS-LRDAMFVPAVCYIIIAIYGI 406 (420)
Q Consensus 370 g~~i~p~i~G~l~d~~g-~~~~~~~~~~~~~~~~~~~~ 406 (420)
+..++|++.|.+.|.+| |...|+.+.++..+.+...+
T Consensus 436 ~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~ 473 (509)
T KOG2504 436 GALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLL 473 (509)
T ss_pred HHHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHHHHHHH
T ss_conf 98700213413220047730189870539999999999
No 49
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.98 E-value=2.1e-28 Score=158.66 Aligned_cols=363 Identities=13% Similarity=0.092 Sum_probs=265.9
Q ss_pred HHHHHH----HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHC
Q ss_conf 999999----8738998999999809998999999999999999999999999985262899999999764321000000
Q gi|254780843|r 21 FLFGGI----TSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTAT 96 (420)
Q Consensus 21 f~~g~~----~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a 96 (420)
.+.+++ ...++|+++++++|+|+|.+++|++++...+.+.+.++...++++|+|.++.+..++++.++|.++-...
T Consensus 18 vlia~NLR~~itsvgPlL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~llli~~G~~iR~~~ 97 (395)
T COG2807 18 VLIAFNLRPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG 97 (395)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99972353145300310999987716618888899988999999887540799998756889999999999999998205
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf 13202467899988777567888765310000123035788776644311000034547888886412342046776555
Q gi|254780843|r 97 IEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSMLAD 176 (420)
Q Consensus 97 ~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~ 176 (420)
+.+.++....+.|.|.+..+...+..+.+.+|+ +-+..++.+......+..+++.+...+.....+|......+.
T Consensus 98 ----~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk-~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WA 172 (395)
T COG2807 98 ----GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPK-RVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWA 172 (395)
T ss_pred ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_conf ----388999999999746999988626999866454-012687699999989998876626579886261799999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 55778988864200112110013455554321012310123321000111122211111110001110001355677899
Q gi|254780843|r 177 TMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYVGAEVAIGSI 256 (420)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (420)
.........|..- ..++ +..+.+....+..+..+++..|.....+......++....|
T Consensus 173 l~allAl~~WlPq-------------------~~r~---~~~~~~~~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~W 230 (395)
T COG2807 173 LLALLALLIWLPQ-------------------ALRE---QAASIATKLVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGW 230 (395)
T ss_pred HHHHHHHHHHHHH-------------------CCCC---CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999998653-------------------0352---11012456675550035840689999997668899999999
Q ss_pred HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHH-HHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Q ss_conf 99875420122210124688899998764310011111100000000012-45555456768996223368999999999
Q gi|254780843|r 257 MANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLC-AFATTACSLVILSSYTTGFISGWSLIAVG 335 (420)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 335 (420)
++.+..+ .|.+....+...+.................+|.+.++... .......+..+...+.+.........++|
T Consensus 231 LP~ili~---~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw~~llG 307 (395)
T COG2807 231 LPAILID---RGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILWALLLG 307 (395)
T ss_pred HHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999997---5878787502999999999989878899998831523499999999999998899840147999999990
Q ss_pred HHHHHHHHHHHHHHHHHHHH--HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999963015--656999999-9999999999999999999612-3799999999999999999985311
Q gi|254780843|r 336 LFNSIMFPTIFSLASASLED--QASGGSGII-CTTISGGVIIPLGVGYLVDIAS-LRDAMFVPAVCYIIIAIYGIYCCYK 411 (420)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~g~~i~p~i~G~l~d~~g-~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (420)
++.+..+|...........+ .+..-++.. ..+++-.+.+|+++|++.|.+| ++......+.+-+...++++...|+
T Consensus 308 ~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a~r~ 387 (395)
T COG2807 308 LGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLRAGRN 387 (395)
T ss_pred CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHH
T ss_conf 76103789999999860578678899888763015898744016676789722880889999999999999986530612
Q ss_pred HH
Q ss_conf 10
Q gi|254780843|r 412 EN 413 (420)
Q Consensus 412 ~~ 413 (420)
++
T Consensus 388 ~~ 389 (395)
T COG2807 388 RY 389 (395)
T ss_pred HH
T ss_conf 77
No 50
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.98 E-value=5.5e-28 Score=156.60 Aligned_cols=382 Identities=13% Similarity=0.064 Sum_probs=219.2
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH--HHHHHHHC-CHHC
Q ss_conf 99999987389989999-99809998999999999999999999999999985262899999999--76432100-0000
Q gi|254780843|r 21 FLFGGITSLNSILVPKL-QNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLL--IMSLGCIL-FTAT 96 (420)
Q Consensus 21 f~~g~~~~~~~~~~p~l-~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~--~~~i~~ll-~~~a 96 (420)
|.+-+..++.-|..|.. +|+.|+|.+|+|++.|+..+...+.+|..|.++||.|.||-++.-.. ....+... ..+.
T Consensus 18 f~yF~~~g~~~pf~~vwL~~~~Gls~~qIGli~s~~~~~~l~~~p~~G~lsDk~g~~k~ll~~~~~~~~~~~~~f~~vf~ 97 (418)
T PRK09528 18 FFFFFIWSSYFSFFPIWLHDINGLSKTDTGIIFSAISLFALLFQPLYGVISDKLGLKKYLLWIISGLLVLFGPFFIYVFA 97 (418)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999676789899999999999999999998889997420241278999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHH--HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHH
Q ss_conf 1320246789998877756788876531000012303578--87766443110000345478888864123420467765
Q gi|254780843|r 97 IEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTA--VSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSML 174 (420)
Q Consensus 97 ~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r--~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~ 174 (420)
+... .-......+.++..+....+..+....+..+..| +...+..-...++|.+++..+.+.+........ . +.
T Consensus 98 pll~--~~~~lg~~~~~i~~~~~~~a~~pl~ds~~~~~s~~~~~~YG~iRlwGSiGfavas~~~G~l~~~~~~~~-f-~~ 173 (418)
T PRK09528 98 PLLQ--YNILVGAIVGGIYLGFGFNAGAGAIEAYIEKVSRNSGFEYGRARMFGSLGWALCAFFAGILFNINPQIN-F-WL 173 (418)
T ss_pred HHHH--HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH-H-HH
T ss_conf 9999--999999999999999987346638999999998775897624789999999999999889876173289-9-99
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 55557789888642001121100134555543210123101233210001111222111111100011100013556778
Q gi|254780843|r 175 ADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYVGAEVAIG 254 (420)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (420)
.............. .........+..+++..++.+...++..+..++++.+.................
T Consensus 174 ~s~~~li~~~ll~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llk~~~~~~f~l~~~~~~~~~~~~d 241 (418)
T PRK09528 174 GSGCALILAVLLFF------------AKPDAPSTATVANAVGANPSAVSLKDALALFKLPKFWFLVLYVIGVACIYDVFD 241 (418)
T ss_pred HHHHHHHHHHHHHH------------HCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999998------------467653221000000146688779999998367499999999999999999999
Q ss_pred HHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH-HH
Q ss_conf 999987-5420122210124688899998764310011111100000000012455554567689962233689999-99
Q gi|254780843|r 255 SIMANY-LMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYTTGFISGWS-LI 332 (420)
Q Consensus 255 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 332 (420)
...+.| .......+.+....+...+.....-+......++..+|++.++.+........+-.......+....... -.
T Consensus 242 ~~f~~f~~~~~~~~~~g~~~~G~l~s~gv~~Ei~~m~~~~~l~~r~g~k~~Llla~~~~~lRw~~~~~~~~~~~i~~~ql 321 (418)
T PRK09528 242 QQFPNFFASFFATHEQGTRVFGYLNSFQVFLEALIMFFAPLIINRIGAKNALLLAGTIMAVRIIGSAFATNALEVSILKL 321 (418)
T ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 88889999997701667136769999999999999999999998608099999999999999998630013899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999963015656999-99--9999999999999999999961237999999999999999999853
Q gi|254780843|r 333 AVGLFNSIMFPTIFSLASASLEDQASGGS-GI--ICTTISGGVIIPLGVGYLVDIASLRDAMFVPAVCYIIIAIYGIYCC 409 (420)
Q Consensus 333 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~g~~i~p~i~G~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~ 409 (420)
+-++-.+...........+..|++-.... .+ .....+|..+++++.|++.|+.|++..|.++.++.+...+++.+..
T Consensus 322 LHa~tf~l~~~a~~~yI~~~~~~~l~aT~~~v~~~~~~gl~~~i~s~~~G~lyD~~G~~~~y~~~g~i~~~~tlis~f~l 401 (418)
T PRK09528 322 LHAFEVPFLLVGIFKYITSNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQDTYLVLGLIVLGFTLISAFTL 401 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999985888889999999999999999999742068899984457999999999999999999973
Q ss_pred HHHHCCCCC
Q ss_conf 111020127
Q gi|254780843|r 410 YKENNFEQN 418 (420)
Q Consensus 410 ~~~~~~~~~ 418 (420)
+|+|+..+.
T Consensus 402 ~~~~~~~~~ 410 (418)
T PRK09528 402 SGKRPLSGL 410 (418)
T ss_pred CCCCCCCCC
T ss_conf 578867532
No 51
>KOG1330 consensus
Probab=99.97 E-value=1.4e-31 Score=174.58 Aligned_cols=355 Identities=14% Similarity=0.051 Sum_probs=223.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCCCCH
Q ss_conf 99999873899899999980999899999999999999999999999998526289999999976432100000013202
Q gi|254780843|r 22 LFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATIEITT 101 (420)
Q Consensus 22 ~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~~~~ 101 (420)
+--.+...+.-..+++++.||++++..|++++.+.+.+.+++|+.|+++|||.||+++.+|..+|.++.++++++ ..
T Consensus 44 mny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs---~~ 120 (493)
T KOG1330 44 MNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFS---NH 120 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHH---HH
T ss_conf 987434120015677887608890205601489999999999889988764274158755889999999998889---99
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf 46789998877756788876531000012303578877664431100003454788888641234204677655555778
Q gi|254780843|r 102 FKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSMLADTMKDY 181 (420)
Q Consensus 102 ~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ 181 (420)
||++.+.|.+.|+|++...+..++.++|.+++.+|++.+++.+....+|..+|...+..+.....+|++...........
T Consensus 121 Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi 200 (493)
T KOG1330 121 FWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVI 200 (493)
T ss_pred HHHHHHHHHHHCCCHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCEEEEEEEEHHHHHH
T ss_conf 99999999884240544110202676640760256677887542101356414774015415766368988740089999
Q ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98886420011211001345555432101231012332100011112221111111000111000135567789999875
Q gi|254780843|r 182 QTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYVGAEVAIGSIMANYL 261 (420)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (420)
............... ..++...+.....+.....++.+...+++........+....+....+..|.+.+.
T Consensus 201 ~~~L~~~f~~eP~rg---------a~~~~~~~~~~~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~ 271 (493)
T KOG1330 201 VGLLVFLFVREPERG---------ARDEVDGENKMVKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFI 271 (493)
T ss_pred HHHHHHHHCCCCCCC---------CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 999987503574223---------21012367767788522678899987067013005899999883064323456678
Q ss_pred HHHCC-CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH----CCCHHHHH---H---HHHHHHH-HHHHHC--CHHHH
Q ss_conf 42012-2210124688899998764310011111100000----00001245---5---5545676-899622--33689
Q gi|254780843|r 262 MRHDT-LHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFS----AEKTLCAF---A---TTACSLV-ILSSYT--TGFIS 327 (420)
Q Consensus 262 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~---~---~~~~~~~-~~~~~~--~~~~~ 327 (420)
..... .+.+.............+..++...++...|+.. +....... + ....+.. .+.... .....
T Consensus 272 ~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~ 351 (493)
T KOG1330 272 YYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIF 351 (493)
T ss_pred HHHHHHHCCCCCCCHHHHHHHHHHCHHHHEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88998707764422255568986052440212788888887426643054778987611458999999998611488999
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHH-HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHH-HHH
Q ss_conf 999999999999999-9999999963015-656999999--999999999999999999961-237
Q gi|254780843|r 328 GWSLIAVGLFNSIMF-PTIFSLASASLED-QASGGSGII--CTTISGGVIIPLGVGYLVDIA-SLR 388 (420)
Q Consensus 328 ~~~~~~~g~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~--~~~~~g~~i~p~i~G~l~d~~-g~~ 388 (420)
.+.++++|....... ++......+.+|+ ++..+.++. ....+|.+-+|++.|.+.|+. |++
T Consensus 352 ~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~g~~ 417 (493)
T KOG1330 352 GLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKLRGYK 417 (493)
T ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHCCC
T ss_conf 999999999998616556643136862755320899999999998324888614046788861899
No 52
>TIGR00896 CynX cyanate transporter; InterPro: IPR004747 This family of proteins is involved in active transport of cyanate. The cyanate transporter (CynX) in Escherichia coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=99.97 E-value=1.6e-28 Score=159.34 Aligned_cols=346 Identities=14% Similarity=0.051 Sum_probs=267.4
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHH
Q ss_conf 73899899999980999899999999999999999999999998526289999999976432100000013202467899
Q gi|254780843|r 28 SLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATIEITTFKVFLI 107 (420)
Q Consensus 28 ~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~~~~~~~~~~ 107 (420)
+.++|+++++++++|+|.+++|++++...+++++.++.+.++..|+|.+|++..++++.++|.++-- ..+.-..++.
T Consensus 17 TSvgPLL~~~R~~lgmS~~~AGLLT~LP~L~fa~l~~~Ap~LarRfG~eR~v~~~Ll~i~aG~l~R~---~~~~~~~Lf~ 93 (372)
T TIGR00896 17 TSVGPLLEEVRSALGMSASVAGLLTALPVLCFAVLAPLAPKLARRFGEERSVLAGLLLIAAGILIRE---SAPGTALLFA 93 (372)
T ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHC---CCCCHHHHHH
T ss_conf 7488789999877351588899987578999998887545887662527999999999999999830---4773059999
Q ss_pred HHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC-CHHHHHHHHHHHHHHHHHH
Q ss_conf 988777567888765310000123035788776644311000034547888886412342-0467765555577898886
Q gi|254780843|r 108 ALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLA-SPNTSMLADTMKDYQTDTA 186 (420)
Q Consensus 108 ~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~ 186 (420)
...+.|.|.+..+...+..+.+.+| ++-+..++.+......+..++.-..-.+.+...+ |......+..........|
T Consensus 94 gtal~G~GIai~nVLlP~lIKR~Fp-~~~g~m~GlYs~al~~gaaLaaa~tVPL~~~~~g~W~~~L~~W~~~allAll~W 172 (372)
T TIGR00896 94 GTALAGVGIAIINVLLPSLIKRDFP-ERVGLMTGLYSMALALGAALAAAATVPLAQALGGRWQQALALWALLALLALLLW 172 (372)
T ss_pred HHHHHHHHHHHHHHHHCCHHCCCCC-CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 9999998999977570301002145-543046789999999887666133245562467841899999999999999820
Q ss_pred HHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 42001121100134555543210123101233210001111222111111100011100013556778999987542012
Q gi|254780843|r 187 RVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYVGAEVAIGSIMANYLMRHDT 266 (420)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (420)
..-. ..+.......+..+++++.+..+++.+.+.....+.|.-|.....+......++....|++.+..+
T Consensus 173 ~PQ~-------r~~~a~~~~~~~APrPedGrsaekrael~~~~i~rsp~AW~vt~f~GL~s~~~Y~~igWlP~Ili~--- 242 (372)
T TIGR00896 173 LPQV-------RRRKAANQTAKRAPRPEDGRSAEKRAELTPKRIWRSPLAWQVTVFFGLQSLLYYIVIGWLPAILIS--- 242 (372)
T ss_pred CHHH-------CCCCCHHHCCCCCCCCCCCCCHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
T ss_conf 2020-------142151102677978877640333301576521315058999999989999999999999999986---
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCC-CHHHHHHHHHHHHHHHHHHCCHHHHHH-HHHHHHHHHHHHHHH
Q ss_conf 221012468889999876431001111110000000-001245555456768996223368999-999999999999999
Q gi|254780843|r 267 LHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAE-KTLCAFATTACSLVILSSYTTGFISGW-SLIAVGLFNSIMFPT 344 (420)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~ 344 (420)
.|.|..+.|...+..........+......+|.+.+ ........+..+..+...+.+...... ...++|++.|..+|.
T Consensus 243 ~G~sa~~AG~ll~l~~~~~~~~~ll~P~~A~r~kdqR~i~~~~~~~~L~G~~Gl~~~P~~~~~~iW~~~~G~G~G~~f~L 322 (372)
T TIGR00896 243 HGVSAATAGLLLALMQLAQLASALLIPLLASRVKDQRGIVVVVAVLQLVGLCGLLFAPLHGLWAIWALVLGLGQGGAFSL 322 (372)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf 38877568999999999987689998899704885699999999999999999998504599999999983012036999
Q ss_pred HHHHHHHHHHHHH--HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999996301565--6999999-99999999999999999996123
Q gi|254780843|r 345 IFSLASASLEDQA--SGGSGII-CTTISGGVIIPLGVGYLVDIASL 387 (420)
Q Consensus 345 ~~~~~~~~~~~~~--~~~~~~~-~~~~~g~~i~p~i~G~l~d~~g~ 387 (420)
..++......+.+ ..-+++. ..+++=.+.+|++.|.+.|++|-
T Consensus 323 aLtli~lRs~~a~~AA~LS~maQs~GYllA~~GP~~vG~L~d~~g~ 368 (372)
T TIGR00896 323 ALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLLVGVLHDISGN 368 (372)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 9999999621688999998887889999986458888888721568
No 53
>TIGR00898 2A0119 cation transport protein; InterPro: IPR004749 Organic cation transport proteins belong to this group. The protein from human is a sodium-dependent, high affinity carnitine transporter that also transports organic cations without the involvement of sodium. It is involved in the active cellular uptake of carnitine.; GO: 0015075 ion transmembrane transporter activity, 0006811 ion transport, 0016021 integral to membrane.
Probab=99.97 E-value=9.6e-29 Score=160.40 Aligned_cols=379 Identities=13% Similarity=0.079 Sum_probs=238.1
Q ss_pred HHHHHHHHHHCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHH
Q ss_conf 989999998099---98999999999999999999999999985262899999999764321000000132024678999
Q gi|254780843|r 32 ILVPKLQNSFSL---TYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATIEITTFKVFLIA 108 (420)
Q Consensus 32 ~~~p~l~~~~~~---s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~~~~~~~~~~~ 108 (420)
+..+.+..|||+ ++.+..+.+|++++|.++|+...|.++||||||+++.++.+..++...+.+++ ++|..+.+.
T Consensus 123 ~~~stiv~EW~LvC~~~~~~~L~~s~~~~G~L~Gs~~~G~lsDrfGRk~~L~~s~l~~~~~g~~~a~S---P~~~~~~vf 199 (557)
T TIGR00898 123 TFSSTIVTEWDLVCEDAWKVDLTQSLFFVGVLLGSLVLGYLSDRFGRKKVLLLSTLVTAVSGVLTAFS---PNYTVFLVF 199 (557)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHH
T ss_conf 44873588527430025776688999999999868888778635204899999999998878651275---689999999
Q ss_pred HHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHH-HHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH-H
Q ss_conf 8877756788876531000012303578877664-4311000034547888886412342046776555557789888-6
Q gi|254780843|r 109 LCILAIGVVIIQVALNPFISLLGDPNTAVSRLTF-AQFFNSLGTAIFPYIGSVLMLGNLASPNTSMLADTMKDYQTDT-A 186 (420)
Q Consensus 109 ~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~ 186 (420)
|++.|.+.+...+...++..|+.|.+.|.....+ ...++.+|.++-|.++...-+. .|.+................ |
T Consensus 200 R~L~G~~~~g~~~~~~~L~~E~~~~~~R~~~~~lG~~~~~~~G~~~L~l~AY~~~~S-gWR~L~l~~s~P~~~~~~~~rw 278 (557)
T TIGR00898 200 RLLVGMGIAGIWVVAVVLNTEFLPKKQRAIVGILGIQVFFSLGLLLLPLVAYFIPDS-GWRWLQLAVSLPLFIFLLLSRW 278 (557)
T ss_pred HHHHHHHHCCEEEEEEEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999613100202577776775327366157661035888887699987788653785-5899999999889999999877
Q ss_pred HHHCCCCCC---CHHHHHHHHHH------HH------CC----CCC-CHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 420011211---00134555543------21------01----231-012332100011112221111111000111000
Q gi|254780843|r 187 RVISQMYLV---LAIILFLATWL------CW------MQ----RNS-FADHKRNHISFLKTLDILANPRFTMGAVCIFLY 246 (420)
Q Consensus 187 ~~~~~~~~~---~~~~~~~~~~~------~~------~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (420)
...--+... ........... .+ .. +.+ +++..+++.......+..+.+..+...+.....
T Consensus 279 ~vpESpRWL~~~gr~~~A~~~L~~~A~~Ng~~~eg~~~~~~~~~~~~~~~~~~~k~~~~~~~~L~rtp~lr~~tl~l~~~ 358 (557)
T TIGR00898 279 FVPESPRWLISQGRIEEALKILQRVAKINGKKEEGGKLPAEVLSLSLEKELSSKKAQKPSFLDLFRTPQLRKTTLILMML 358 (557)
T ss_pred HHHCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHH
T ss_conf 71013125642485789999999985337861553326603330025666542200143215540687899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCC---------------------HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHH
Q ss_conf 135567789999875420122210---------------------12468889999876431001111110000000001
Q gi|254780843|r 247 VGAEVAIGSIMANYLMRHDTLHLD---------------------GISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTL 305 (420)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (420)
... ....++-. ......++.+ ....-.-.......-..+.++.....||++|+...
T Consensus 359 Wf~-~~f~YyGL--~l~~~~l~~n~D~C~~~~~~~~~~~~~C~~L~~~~Y~~~~~~glve~Pa~~~~~l~i~~LgRr~~~ 435 (557)
T TIGR00898 359 WFT-TAFSYYGL--VLDLENLGGNGDVCSISLFKKAVEAKVCEYLSKEIYLDLFISGLVELPAKLITLLLIDRLGRRYTM 435 (557)
T ss_pred HHH-HHHHHHHH--HHHHHCCCCCCCEECCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 999-88999877--753211478744002310004410022211008999999999998889999889887621776799
Q ss_pred HHHHHHHHHHHHHHHHCCHH------HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH
Q ss_conf 24555545676899622336------8999999999-999999999999999630156569--99999999999999999
Q gi|254780843|r 306 CAFATTACSLVILSSYTTGF------ISGWSLIAVG-LFNSIMFPTIFSLASASLEDQASG--GSGIICTTISGGVIIPL 376 (420)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~i~p~ 376 (420)
...........+...+.+.. .....+..+| .+.+..|...+-+..|.+|...+. .+....++.+|+.+.|.
T Consensus 436 a~~~~~ag~~~l~~~~~~~~~~~~~G~l~t~L~~~g~~~~~~aF~~~ylyt~ELYPT~~Rn~G~g~~S~m~r~G~i~~P~ 515 (557)
T TIGR00898 436 AASLLLAGVALLLLLFVPEELYFYNGWLRTALAVLGKAGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPF 515 (557)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999986312355306999999999999888872542220565015899999999999999875799999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 999999961237999999999999999999853111020127
Q gi|254780843|r 377 GVGYLVDIASLRDAMFVPAVCYIIIAIYGIYCCYKENNFEQN 418 (420)
Q Consensus 377 i~G~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (420)
+. +..+.......+.+...+..+.+...++....++..-.|
T Consensus 516 ~~-~~~~~~~~~lP~~~fG~~~~l~~~~~l~LPEt~g~~Lpe 556 (557)
T TIGR00898 516 LV-YRLGEVWLFLPLVIFGVLALLAGILTLLLPETKGVPLPE 556 (557)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 99-998554454589999999999999988521016888889
No 54
>TIGR00891 2A0112 MFS transporter, sialate:H+ symporter (SHS) family; InterPro: IPR004742 The sugar transporters belong to a family of membrane proteins responsible for the transport of various sugars in a wide range of prokaryotic and eukaryotic organisms . These integral membrane proteins are predicted to comprise twelve membrane spanning domains. It is likely that the transporters have evolved from an ancient protein present in living organisms before the divergence into prokaryotes and eukaryotes . In mammals, these proteins are expressed in a number of organs . Proteins transporting sugars and other substrates are related in this broader family. Sialic acid transporters belong to this group.; GO: 0015144 carbohydrate transmembrane transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=99.97 E-value=5e-30 Score=166.82 Aligned_cols=376 Identities=10% Similarity=-0.003 Sum_probs=265.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
Q ss_conf 53112005999999999999999987389989999998099989999999999999999999999999852628999999
Q gi|254780843|r 3 DTIARNIQCTKIYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTG 82 (420)
Q Consensus 3 ~~~~k~~~~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~ 82 (420)
.++++.++..+..-++-+-+-+|+...+.....+++++||.+..|+.++.++.++..-+|++..|...||+|||..++.+
T Consensus 4 r~lt~~qwnaF~a~~lgwl~dafdfflv~lv~a~~a~~f~~t~~d~a~l~~a~l~~R~~Gal~fGlw~Dr~gRr~p~~t~ 83 (453)
T TIGR00891 4 RKLTRDQWNAFFAAYLGWLLDAFDFFLVALVLAEVAEEFDRTTKDVAFLLSAVLIVRSVGALLFGLWADRVGRRLPLVTS 83 (453)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
T ss_conf 66567888999999999998545300123565010420068447899999999999758899998874225560378888
Q ss_pred HHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 99764321000000132024678999887775678887653100001230357887766443110000345478888864
Q gi|254780843|r 83 LLIMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLM 162 (420)
Q Consensus 83 ~~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 162 (420)
..+++++.++|+++ ++|..+.+.|.+.|+|.+..+....++..|-.|.+.|+...|+...++..|.+++......+.
T Consensus 84 ~~lfs~~~l~c~fa---p~y~~~~i~Rl~~GigMgG~yG~~aa~~iE~~P~~~R~~~SGll~sgya~G~~~A~~~y~~v~ 160 (453)
T TIGR00891 84 VVLFSVATLLCAFA---PTYEKLLIVRLVIGIGMGGEYGLAAALAIEKVPAKLRSVLSGLLISGYAVGYVLAAVVYRVVV 160 (453)
T ss_pred HHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 79999999750557---607889999999964410046679989998403876223325888899999999999999888
Q ss_pred HCCC-CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCC--------------
Q ss_conf 1234-2046776555557789888642001121100134555543210123101233210001111--------------
Q gi|254780843|r 163 LGNL-ASPNTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKT-------------- 227 (420)
Q Consensus 163 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 227 (420)
.... +|+..+.... ........++.... ............+..+...++....+...+..
T Consensus 161 ~~~g~~Wr~LF~~sI-~p~i~~l~~R~~~p----E~e~w~~~~~~~~l~~t~~~~~~gge~~~~~~~~~~~~~talWfCf 235 (453)
T TIGR00891 161 NFLGLSWRILFFLSI-LPAILALFLRLRVP----EAEVWKKALKAKKLVKTRVDKVLGGEALVKAIVKTKAVATALWFCF 235 (453)
T ss_pred HHHCCHHHHHHHHHH-HHHHHHHHHHCCCC----CCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 762325899999999-99999999850386----2067999984036416689986278602799999999999999988
Q ss_pred ---------------------------CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH--CCCCCCHHHHHHHH
Q ss_conf ---------------------------2221111111000111000135567789999875420--12221012468889
Q gi|254780843|r 228 ---------------------------LDILANPRFTMGAVCIFLYVGAEVAIGSIMANYLMRH--DTLHLDGISAGQHT 278 (420)
Q Consensus 228 ---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 278 (420)
....+.+............+.........+|+|...+ ++.+++......+.
T Consensus 236 aGnlqnaaivavlGllCaaifisfM~~~~~KrW~~fvyLvvl~~~~n~~sh~~QdllPT~L~a~tdhGlgls~~tv~~iv 315 (453)
T TIGR00891 236 AGNLQNAAIVAVLGLLCAAIFISFMKRSVQKRWLLFVYLVVLLVAANYLSHAIQDLLPTYLKADTDHGLGLSKDTVAVIV 315 (453)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCEEEE
T ss_conf 41013689999999999999999987740312478999999999988752104553220121354201345731416877
Q ss_pred HHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHH-HHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9998764310011111100000000012455554-5676899622--336899999999999999999999999963015
Q gi|254780843|r 279 AIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTA-CSLVILSSYT--TGFISGWSLIAVGLFNSIMFPTIFSLASASLED 355 (420)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 355 (420)
....++.+++..+.+.+.++.++|+....++... +.....+... +........++.-++.-..+..+-.+..|..|+
T Consensus 316 v~~niGAi~Gg~~fG~l~~~~grR~~~v~~~~~g~l~i~P~Fa~~G~~~a~Lglg~F~~q~~vqG~wGilP~hl~e~~p~ 395 (453)
T TIGR00891 316 VVSNIGAIVGGLVFGTLSEVLGRRLALVIALLLGQLLIVPVFALSGAEAAVLGLGLFLLQVLVQGVWGILPKHLAELAPA 395 (453)
T ss_pred EEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCH
T ss_conf 87262468775530215566668999999998601233025652141799999999999998415765579886045903
Q ss_pred HHHHHH-HH-HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 656999-99-99999999999999999999612
Q gi|254780843|r 356 QASGGS-GI-ICTTISGGVIIPLGVGYLVDIAS 386 (420)
Q Consensus 356 ~~~~~~-~~-~~~~~~g~~i~p~i~G~l~d~~g 386 (420)
..+... ++ ...+.++++..|++--.++|+..
T Consensus 396 d~Ra~~~G~tYqlGnL~~A~a~~I~~~lA~r~~ 428 (453)
T TIGR00891 396 DARAVVAGLTYQLGNLAAALASIIEERLAERYD 428 (453)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 324644363145777898762378887563157
No 55
>TIGR00712 glpT glycerol-3-phosphate transporter; InterPro: IPR005267 This family includes very hydrophobic proteins, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. ; GO: 0015169 glycerol-3-phosphate transmembrane transporter activity, 0015794 glycerol-3-phosphate transport, 0016021 integral to membrane.
Probab=99.97 E-value=1.2e-29 Score=164.89 Aligned_cols=407 Identities=12% Similarity=0.033 Sum_probs=270.8
Q ss_pred HHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
Q ss_conf 112005999999999999----99998738998999999809-9989999999999999999999999999852628999
Q gi|254780843|r 5 IARNIQCTKIYIFILFFL----FGGITSLNSILVPKLQNSFS-LTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGI 79 (420)
Q Consensus 5 ~~k~~~~~~i~i~~~ff~----~g~~~~~~~~~~p~l~~~~~-~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l 79 (420)
+....|+.+.=+++-.|+ +-+.+.-...++|.++|+ | .|.++.|++.|+-.++|.+..++.|..+||-.+|.-+
T Consensus 19 ~D~~YkRLR~QvF~GIF~GYAaYYlvR~NF~lA~PyL~~~-GlfSk~eLG~~lsa~siAYG~SKFiMg~vSDRsNPR~FL 97 (468)
T TIGR00712 19 IDATYKRLRWQVFIGIFFGYAAYYLVRKNFALAIPYLVEQ-GLFSKAELGLVLSAVSIAYGFSKFIMGSVSDRSNPRVFL 97 (468)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
T ss_conf 3757878999999999998999999987586327056755-752103578999999998645678860355676721687
Q ss_pred HHHHHHHHHHHHCCHHCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf 999997643210000001320-2467899988777567888765310000123035788776644311000034547888
Q gi|254780843|r 80 CTGLLIMSLGCILFTATIEIT-TFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIG 158 (420)
Q Consensus 80 ~~~~~~~~i~~ll~~~a~~~~-~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 158 (420)
-.|+++.++..+++...+..+ +..++.+..|+.|--+|+.+|.+-....+|+..+||+..+++++...++|+.+-+.+.
T Consensus 98 ~~GL~Lsa~v~~l~~~~PW~TSsiaiMfv~~Fl~GWFQGMGWPPCGRTMvHW~S~~ERGt~vSiWN~AHNiGG~i~~~lv 177 (468)
T TIGR00712 98 PAGLLLSAIVMLLMGLVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSKSERGTIVSIWNVAHNIGGGIPAALV 177 (468)
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCEEEEECCCCCCCCCHHHHHH
T ss_conf 78899999999998421403579999999999821104887988544200000235778625762152002530589999
Q ss_pred HHHHH-----------CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH-CCCCCCH-HHHHHHCCCC
Q ss_conf 88641-----------234204677655555778988864200112110013455554321-0123101-2332100011
Q gi|254780843|r 159 SVLML-----------GNLASPNTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCW-MQRNSFA-DHKRNHISFL 225 (420)
Q Consensus 159 ~~l~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~ 225 (420)
..-.. ....|....................+........-.+..++.+.. +++..++ .+++...+..
T Consensus 178 ~Lg~A~F~~~~g~ea~akd~W~~~ly~Pa~~Aii~a~~~~~~~RDTPQSCGLP~IE~yrNDYP~~~~~~~~E~eLTaK~I 257 (468)
T TIGR00712 178 LLGIAIFVSTHGIEAQAKDTWKSALYFPAIIAIIVALLVFLLMRDTPQSCGLPPIEEYRNDYPDDYNEKTAEKELTAKEI 257 (468)
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHH
T ss_conf 99999987520100223566788764479999999999988761787788668820015788234541001210147777
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHH
Q ss_conf 11222111111100011100013556778999987542012221012468889999876431001111110000000001
Q gi|254780843|r 226 KTLDILANPRFTMGAVCIFLYVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTL 305 (420)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (420)
-..-..+|+..|....+..+.....++...|.|.|..+.++...+....++ ..+-...+.+.+++++.+||+-+.+-.
T Consensus 258 ~~~YVL~NKlLWYIA~ANVFVYl~RYGvl~WsP~YL~EvK~F~~~~s~WaY--~lYEyAgiPGTlLCGW~SDk~Fkg~Rg 335 (468)
T TIGR00712 258 FVQYVLKNKLLWYIAIANVFVYLVRYGVLDWSPTYLKEVKHFSLEDSAWAY--FLYEYAGIPGTLLCGWVSDKVFKGKRG 335 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHH--HHHHHHCCCCHHHHHHHHHHHCCCCCC
T ss_conf 777765004789999999998887640102362146541145767651466--776764264100021243000024642
Q ss_pred HHHHHHHHHHHHHH---HH----------------CCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Q ss_conf 24555545676899---62----------------233--689999999999999999999999996301565-699999
Q gi|254780843|r 306 CAFATTACSLVILS---SY----------------TTG--FISGWSLIAVGLFNSIMFPTIFSLASASLEDQA-SGGSGI 363 (420)
Q Consensus 306 ~~~~~~~~~~~~~~---~~----------------~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 363 (420)
..+...+....... .. .++ .+-.+.+..+|+....-.-.+--.+.|..||++ ++++++
T Consensus 336 ~~Gv~FM~lv~~Av~vYW~NPAgpeaela~y~awyeNPy~lvD~i~~~~IGFLIYGPVMLIGL~AleLAPKKAAGTAAG~ 415 (468)
T TIGR00712 336 ATGVLFMILVTIAVVVYWLNPAGPEAELANYSAWYENPYQLVDFILLIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGF 415 (468)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 05789999999998887437997403566545552270578989999998888754799998889740674011121003
Q ss_pred H-HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 9-9999999-9999999999996123799999999999999999985311102
Q gi|254780843|r 364 I-CTTISGG-VIIPLGVGYLVDIASLRDAMFVPAVCYIIIAIYGIYCCYKENN 414 (420)
Q Consensus 364 ~-~~~~~g~-~i~p~i~G~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (420)
. .++++|| +.+..+.|+..|++||..+|.++...++++.++.+....++||
T Consensus 416 TGlFGYlGGsv~A~Ai~G~~v~~f~WdGGF~v~Igg~iLAv~lL~~v~~~ekr 468 (468)
T TIGR00712 416 TGLFGYLGGSVAASAIVGFVVDRFGWDGGFIVLIGGSILAVVLLLVVMVEEKR 468 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEHHHHHHHHHHHHHHHHCCCC
T ss_conf 45555333576455553123220126865365324579999999998724889
No 56
>pfam06609 TRI12 Fungal trichothecene efflux pump (TRI12). This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster.It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes.
Probab=99.97 E-value=8.8e-27 Score=150.57 Aligned_cols=163 Identities=13% Similarity=0.081 Sum_probs=134.1
Q ss_pred HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
Q ss_conf 200599999--999999999998738998999999809998999999999999999999999999985262899999999
Q gi|254780843|r 7 RNIQCTKIY--IFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLL 84 (420)
Q Consensus 7 k~~~~~~i~--i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~ 84 (420)
|+.+...++ +.+..|+..++..++++++|.+.+|||-.+. .+|+.++|.++....+++.|+++|.||||++++.+.+
T Consensus 38 ~~~~~~~~~~~l~l~~~~~~ld~tivatAlP~I~~dl~~~~~-~~W~~taylLast~~~pl~GkLsDifGRK~~~l~~~~ 116 (598)
T pfam06609 38 RSPRIIASFAAFSLNVCATYFVLQASASALPNILQDIGQSEN-QGLFSTLWTMGQAVSILMMGRLTDRFGRRPFVIATHI 116 (598)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-EEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_conf 763389999999999999995002766347169987089877-3549999999999999737689878367999999999
Q ss_pred HHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
Q ss_conf 76432100000013202467899988777567888765310000123035788776644311000034547888886412
Q gi|254780843|r 85 IMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLG 164 (420)
Q Consensus 85 ~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 164 (420)
++.+|+++++.+ ++...+...|.++|.|.+.... ....+.|..++++|...+.........+...||.+++.+.+.
T Consensus 117 lf~vGsiic~~A---~s~~~lI~grai~G~gaG~~~~-~~~ii~~~~~~r~r~~g~~~~~~~~~~~s~~GPllGg~~~~~ 192 (598)
T pfam06609 117 IGLVGAIVGCTA---NKFNTLLAAMTLLGVAAGPAGA-SPLFIGELMSNKTKFLGLLIVSAPTIAMNGAGPYFGQRLAIQ 192 (598)
T ss_pred HHHHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 999999999546---6699999999999984788888-887612551654113230599999999976678878884247
Q ss_pred CCCCHHHHHH
Q ss_conf 3420467765
Q gi|254780843|r 165 NLASPNTSML 174 (420)
Q Consensus 165 ~~~~~~~~~~ 174 (420)
..|++.++..
T Consensus 193 ~sWRW~Fyin 202 (598)
T pfam06609 193 GNWRWIFYIY 202 (598)
T ss_pred CCCEEEEEHH
T ss_conf 8842886221
No 57
>pfam01306 LacY_symp LacY proton/sugar symporter. This family is closely related to the sugar transporter family.
Probab=99.97 E-value=9.6e-27 Score=150.36 Aligned_cols=378 Identities=12% Similarity=0.048 Sum_probs=217.1
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH--HHH-CCHHC
Q ss_conf 999999873899899999-98099989999999999999999999999999852628999999997643--210-00000
Q gi|254780843|r 21 FLFGGITSLNSILVPKLQ-NSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSL--GCI-LFTAT 96 (420)
Q Consensus 21 f~~g~~~~~~~~~~p~l~-~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i--~~l-l~~~a 96 (420)
|.+-+..++.-|..|..- |+.|+|.+|+|.+.|+..+...+.+|+.|.++||.|.||-++.......+ +.. .....
T Consensus 17 f~yF~~~g~~~pf~~lwL~~~~Gls~~~IGil~s~~~~~~il~qp~~G~lsDk~g~rk~ll~~i~~~l~l~~~ffi~~~~ 96 (413)
T pfam01306 17 FFYFFIMSAYFPFFPIWLHDVNHLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLRKHLLWCITGLLVLFAPFFIYVFG 96 (413)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999899999777579899999999999999999982789986034455018999999999999999999997
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHH--HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHH
Q ss_conf 1320246789998877756788876531000012303578--87766443110000345478888864123420467765
Q gi|254780843|r 97 IEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTA--VSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSML 174 (420)
Q Consensus 97 ~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r--~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~ 174 (420)
+.... -......+.++..+....+..+....+..+..| +...+......++|.+++..+.|.+........ . +.
T Consensus 97 pll~~--~~~l~~lv~~i~~~~~~~~~~pl~ea~~~~~sr~~~~~YGriRlwGSiGfai~a~~~G~l~~~~p~~~-f-~~ 172 (413)
T pfam01306 97 PLLQS--NILVGAIVGGVYLGFVFSAGAGAIEAYIEKVSRRSNFEYGKARMFGCVGWALCASIAGILFSIDPQIV-F-WL 172 (413)
T ss_pred HHHHH--HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHH-H-HH
T ss_conf 89899--99999999999999998554279999999998763774213688999999999998678875285289-9-99
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 55557789888642001121100134555543210123101233210001111222111111100011100013556778
Q gi|254780843|r 175 ADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYVGAEVAIG 254 (420)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (420)
........ ....... .++.....+..+....+++....++..+..++++.+.................
T Consensus 173 ~s~~~~i~-~ll~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~llk~~~~~~f~l~v~g~~~~y~v~d 240 (413)
T pfam01306 173 GSGFALIL-ALLLMFA-----------KPDKSSSAIVADALGANKSAFSLRLALELFRMPKFWVFVLYVVGVACVYDVFD 240 (413)
T ss_pred HHHHHHHH-HHHHHHC-----------CCCCCCHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999-9999980-----------78764102331010124577647779999615479999999999999988777
Q ss_pred HHHHH-HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHH-HHH
Q ss_conf 99998-7542012221012468889999876431001111110000000001245555456768996223368999-999
Q gi|254780843|r 255 SIMAN-YLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYTTGFISGW-SLI 332 (420)
Q Consensus 255 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 332 (420)
...+. +.......+.+....+...+.....-........+..+|++.++.+.....+..+-.......++.+..+ .-.
T Consensus 241 ~~f~~f~~~~~~~~~~g~~~~G~l~s~~v~~E~~~m~~~~~l~~R~G~k~~Llla~~i~~iR~~~~~~~~~~~~ii~~ql 320 (413)
T pfam01306 241 QQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRILGSSFATTALEVVILKM 320 (413)
T ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 77899999996342768431219999999999999999899998708398999999999999999743230699999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999630156569-9999--9999999999999999999961237999999999999999999853
Q gi|254780843|r 333 AVGLFNSIMFPTIFSLASASLEDQASG-GSGI--ICTTISGGVIIPLGVGYLVDIASLRDAMFVPAVCYIIIAIYGIYCC 409 (420)
Q Consensus 333 ~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~g~~i~p~i~G~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~ 409 (420)
+-++-.+...........+..|++-.. +-.+ .....+|+.+++++.|++.|+.|++..|.++....++..+++.+..
T Consensus 321 LH~~t~~l~~va~~kyI~~~f~~rl~aT~~~v~~~~~~g~~~~i~s~~~G~l~D~~G~~~ty~il~~i~l~~tiis~f~l 400 (413)
T pfam01306 321 LHMFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFSKQLAMILLSTLAGIMYDSIGFQGAYLVLGGIVLSFTLISVFTL 400 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
T ss_conf 99989999999999999986793022149999999999888998611288899970378999999999999999983266
Q ss_pred HHHHC
Q ss_conf 11102
Q gi|254780843|r 410 YKENN 414 (420)
Q Consensus 410 ~~~~~ 414 (420)
+|++.
T Consensus 401 ~~~~~ 405 (413)
T pfam01306 401 SGSGP 405 (413)
T ss_pred CCCCC
T ss_conf 58996
No 58
>KOG0569 consensus
Probab=99.96 E-value=2.5e-26 Score=148.28 Aligned_cols=413 Identities=12% Similarity=0.082 Sum_probs=243.2
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHC--CCHHHHH----HHHHHHHHHHHHHHHHH
Q ss_conf 97531120059999999999999999873899899999--------9809--9989999----99999999999999999
Q gi|254780843|r 1 MKDTIARNIQCTKIYIFILFFLFGGITSLNSILVPKLQ--------NSFS--LTYLQAM----LVEAIFFSCYFFFSIPA 66 (420)
Q Consensus 1 m~~~~~k~~~~~~i~i~~~ff~~g~~~~~~~~~~p~l~--------~~~~--~s~~~~g----~i~s~~~~~~~i~~~~~ 66 (420)
+|+...++.-+..+.....-|-+|+....+++..+.++ +.+| +|+.+.. .+.+++++|.+++++..
T Consensus 1 ~~~~~t~~L~~~~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~ 80 (485)
T KOG0569 1 TKPKLTRRLLLAVIVATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSS 80 (485)
T ss_pred CCCCCCHHHHHHHHHHHHHCHHHHHHHEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99874199999999999814042143100486099999999989998459999867999999999999999999999989
Q ss_pred HHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHH
Q ss_conf 99998526289999999976432100000013202467899988777567888765310000123035788776644311
Q gi|254780843|r 67 GMFIQRYGYIKGICTGLLIMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFF 146 (420)
Q Consensus 67 G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 146 (420)
|.++||+|||..+.++.++..++.+++..+...+++..+...|++.|+..+........++.|..|.+.||......+.+
T Consensus 81 ~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~ 160 (485)
T KOG0569 81 GLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIG 160 (485)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHH
T ss_conf 99987316267899999999999999999988515899999999999986898868889985059053012788999999
Q ss_pred CCCHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH-----HHHHHHHHHHCCCC---CCH--
Q ss_conf 000034547888886412-3420467765555577898886420011211001-----34555543210123---101--
Q gi|254780843|r 147 NSLGTAIFPYIGSVLMLG-NLASPNTSMLADTMKDYQTDTARVISQMYLVLAI-----ILFLATWLCWMQRN---SFA-- 215 (420)
Q Consensus 147 ~~~g~~~g~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~---~~~-- 215 (420)
...|..++..++..-+.. ...|+..................+.......... ............++ ++.
T Consensus 161 ~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~ 240 (485)
T KOG0569 161 VVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEE 240 (485)
T ss_pred HHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHH
T ss_conf 99999999997338755997525999998999999999999537999606989759799999999998299862467999
Q ss_pred -HHHHHHC-----CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-HHH-HHHCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf -2332100-----011112221111111000111000135567789999-875-42012221012468889999876431
Q gi|254780843|r 216 -DHKRNHI-----SFLKTLDILANPRFTMGAVCIFLYVGAEVAIGSIMA-NYL-MRHDTLHLDGISAGQHTAIYWGSAMI 287 (420)
Q Consensus 216 -~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (420)
.++.++. +.....+..+++..+..................... .|. ......|.+...+.............
T Consensus 241 ~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~ 320 (485)
T KOG0569 241 MLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLL 320 (485)
T ss_pred HHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99999985125546785999966801467999999999999844720107799999998699878889999999999999
Q ss_pred HCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCH-------HHHHH---HHHHHHHHHH-HHHHHHHHHHHHHHHHH
Q ss_conf 0011111100000000012455554567689962233-------68999---9999999999-99999999999630156
Q gi|254780843|r 288 GRFIGTWILSRFSAEKTLCAFATTACSLVILSSYTTG-------FISGW---SLIAVGLFNS-IMFPTIFSLASASLEDQ 356 (420)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~---~~~~~g~~~~-~~~~~~~~~~~~~~~~~ 356 (420)
....+..+.||.+||.+.........+...+...... +..+. ...+..+..+ ...|.-+-...|.+|+.
T Consensus 321 ~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~ 400 (485)
T KOG0569 321 STLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQS 400 (485)
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC
T ss_conf 99999999971498689999999999999999999999998666999999999999997531477761178889747954
Q ss_pred HHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 569999--9999999999999999999996123799999999999999999985311102
Q gi|254780843|r 357 ASGGSG--IICTTISGGVIIPLGVGYLVDIASLRDAMFVPAVCYIIIAIYGIYCCYKENN 414 (420)
Q Consensus 357 ~~~~~~--~~~~~~~g~~i~p~i~G~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (420)
.+.++. ..........+.....-.+.+..|- ..|++..+.+.+..+|-.+...+.|+
T Consensus 401 ~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~y~~lPETkg 459 (485)
T KOG0569 401 ARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKG 459 (485)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 068999999999999999999989999987343-65389899999999999995967699
No 59
>TIGR00879 SP MFS transporter, sugar porter (SP) family; InterPro: IPR003663 The sugar transporters belong to a superfamily of membrane proteins responsible for the binding and transport of various carbohydrates, organic alcohols, and acids in a wide range of prokaryotic and eukaryotic organisms . These integral membrane proteins are predicted to comprise twelve membrane spanning domains. It is likely that the transporters have evolved from an ancient protein present in living organisms before the divergence into prokaryotes and eukaryotes . In mammals, these proteins are expressed in a number of organs . This family includes just the sugar transporters. ; GO: 0005351 sugar:hydrogen ion symporter activity, 0008643 carbohydrate transport, 0016020 membrane.
Probab=99.96 E-value=5e-27 Score=151.77 Aligned_cols=399 Identities=14% Similarity=0.088 Sum_probs=245.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCC--------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999873899899999980999--------------------------899999999999999999999999998
Q gi|254780843|r 18 ILFFLFGGITSLNSILVPKLQNSFSLT--------------------------YLQAMLVEAIFFSCYFFFSIPAGMFIQ 71 (420)
Q Consensus 18 ~~ff~~g~~~~~~~~~~p~l~~~~~~s--------------------------~~~~g~i~s~~~~~~~i~~~~~G~l~D 71 (420)
..-+++|+++..++-.++....++..+ ..+.+++.+++.+|..++++..|+++|
T Consensus 80 ~~g~~~GyDt~~i~~~~~~~~~~~~~~~~~~EVCW~~~~~~~~vn~c~~~~~~~~~~~~~v~~~~~G~~~g~l~~g~~~~ 159 (572)
T TIGR00879 80 LGGLLFGYDTGVISGALALPAFEFKFTSAISEVCWLLSDGSQEVNECTGSYYSSSLWGLVVSIFLVGGFIGALFAGWLSD 159 (572)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99987753478999997333543136664110322058884201265215889988999999999999999987556777
Q ss_pred HHCHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHH
Q ss_conf 52628999999997643210000001320246789998877756788876531000012303578877664431100003
Q gi|254780843|r 72 RYGYIKGICTGLLIMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGT 151 (420)
Q Consensus 72 r~Grr~~l~~~~~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 151 (420)
|+|||+.++++.+++.+|.++...+....+++.+.+.|.+.|+|.|......+.|++|..|++.|++..++++.+...|.
T Consensus 160 ~~GRk~~l~~~~~~~v~g~~~~~~~~~~~~~~~~~~gR~l~G~g~G~~s~~~P~Y~sE~AP~~lRG~~~~~~ql~~t~G~ 239 (572)
T TIGR00879 160 RFGRKKSLLIVALLFVIGAILMGAAATALSVEMLIVGRVLLGIGVGIASALVPMYISEIAPKALRGALVSLYQLAITIGI 239 (572)
T ss_pred HHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHH
T ss_conf 53362688999999999999999753102058899999999985318999899989733856557401257899999999
Q ss_pred HHHHHHHH------HH-HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCH---HHHH-HHHHHHHCCCCC-------
Q ss_conf 45478888------86-412342046776555557789888642001121100---1345-555432101231-------
Q gi|254780843|r 152 AIFPYIGS------VL-MLGNLASPNTSMLADTMKDYQTDTARVISQMYLVLA---IILF-LATWLCWMQRNS------- 213 (420)
Q Consensus 152 ~~g~~~~~------~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~------- 213 (420)
.++..... .. ......|+...................++....... .... ......+....+
T Consensus 240 l~a~~~~~~~A~~~~~~~~~~~~w~~~~g~~~~~~~~~~~~~~~~PeSPrwLv~k~~~~~~A~~~L~~~~~~~~~~~~~~ 319 (572)
T TIGR00879 240 LVAYGFGYGLANSGTVSLNNTLGWRIPLGLQLIPAALLFLGLFFLPESPRWLVEKGKVEEFARKSLARLRGTSSEDKEIL 319 (572)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHH
T ss_conf 99999999998766552123222215667778999999999987312146675167658888999997548974247899
Q ss_pred ----------CHHHHHHHCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHH-HHHCCCCCCH-HHHHHHHHH
Q ss_conf ----------0123321000111122211111-11000111000135567789999875-4201222101-246888999
Q gi|254780843|r 214 ----------FADHKRNHISFLKTLDILANPR-FTMGAVCIFLYVGAEVAIGSIMANYL-MRHDTLHLDG-ISAGQHTAI 280 (420)
Q Consensus 214 ----------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~ 280 (420)
+.+.+.......+.....+++. .+............+.........|. ......|.+. .........
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~l~~~qQ~~GiN~~~YY~~~if~~~G~~~~~~~~~~si~ 399 (572)
T TIGR00879 320 DELELIDIARSIEKEQVNQSWGELFSLKRRKVERRRLFLGVVLQAFQQFTGINAIMYYSPTIFENAGVSTTDTAFLVSII 399 (572)
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 99998876545656532543146662178524688999999999987643145145106799997177402357766789
Q ss_pred HHHHHHHHCCCCCCCCCHHHCCCHHHHH---HHHHHHHHHHHHH-----CCH---------HH-HHHHHHHHHH---H-H
Q ss_conf 9876431001111110000000001245---5554567689962-----233---------68-9999999999---9-9
Q gi|254780843|r 281 YWGSAMIGRFIGTWILSRFSAEKTLCAF---ATTACSLVILSSY-----TTG---------FI-SGWSLIAVGL---F-N 338 (420)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-----~~~---------~~-~~~~~~~~g~---~-~ 338 (420)
.........++..+..||++||.+.+.+ ...++++...... ... .. .....+.+.+ + .
T Consensus 400 ~g~~n~~~T~~a~~~vd~~GRr~~l~~G~~~~~~~~~~~~~~g~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~f~a~f~ 479 (572)
T TIGR00879 400 VGAVNFIFTFVAIFLVDRFGRRPLLLIGGIEAAGMAICLFVLGILGASFVTGKGKAQDSSKSAAGNVAIVFILLFIAFFA 479 (572)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999984430578898888999999999999864001000456653321567888899999999999973
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999963015656999999--9999999999999999999---------612379999999999999999998
Q gi|254780843|r 339 SIMFPTIFSLASASLEDQASGGSGII--CTTISGGVIIPLGVGYLVD---------IASLRDAMFVPAVCYIIIAIYGIY 407 (420)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~i~p~i~G~l~d---------~~g~~~~~~~~~~~~~~~~~~~~~ 407 (420)
-...|..+-+..|.+|.+.+..+... ....+.+.+-....-...+ ..+....|++.+...++..++..+
T Consensus 480 ~g~gp~~wv~~sE~Fp~~~R~~~~~~a~~~~w~~nf~~~~~fp~~~~~~~~G~gn~~~~~g~~f~~f~~l~~~~~~~~~f 559 (572)
T TIGR00879 480 MGWGPVPWVIVSEIFPLSVRPKAIAIAVAANWLANFLVGFLFPTMLENSSLGAGNQAIGQGGVFIFFGGLNVLALIFVYF 559 (572)
T ss_pred CCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHH
T ss_conf 25235888773126786551568999999999999999999887633666788765333662365287899999877765
Q ss_pred HHHHHHCCC
Q ss_conf 531110201
Q gi|254780843|r 408 CCYKENNFE 416 (420)
Q Consensus 408 ~~~~~~~~~ 416 (420)
...+.|..+
T Consensus 560 ~~pETkg~~ 568 (572)
T TIGR00879 560 FVPETKGLT 568 (572)
T ss_pred HCCCCCCCC
T ss_conf 103468875
No 60
>TIGR00886 2A0108 nitrite transporter; InterPro: IPR004737 This family represents nitrate/nitrite antiporters in bacteria, fungi, algae and marine diatoms. Nitrate transporters in Escherichia coli are involved in excretion of nitrite produced by the dissimilatory reduction of nitrate. NarK is polytopic membrane protein with 12 transmembrane domains which is involved in nitrate uptake and nitrite excretion and is thought to function as a nitrate/nitrite antiporter. At low concentrations of nitrate, NarK mediates the electrogenic excretion of nitrite rather than nitrate/nitrite exchange. This process prevents intracellular accumulation of toxic levels of nitrite and allows further detoxification in the periplasm through the action of nitrite reductase . In the opportunistic fungal pathogen Aspergillus fumigatus the nitrate transporter crnA clusters with nitrite reductase (niiA) and nitrate reductase (niaD). NiaD, niiA and crnA are induced by nitrate and repressed by ammonium at the transcriptional level . In Hebeloma cylindrosporum the nitrate transporter polypeptide (NRT2) is characterised by 12 transmembrane domains and presents both a long putative intracellular loop and a short C-terminal tail, two structural features which distinguish fungal high-affinity transporters from their plant homologues. Transcription is repressed by ammonium and strongly stimulated by nitrate but also by organic nitrogen or nitrogen deficiency. ; GO: 0015103 inorganic anion transmembrane transporter activity, 0015698 inorganic anion transport, 0016021 integral to membrane.
Probab=99.96 E-value=1.6e-26 Score=149.26 Aligned_cols=337 Identities=15% Similarity=0.133 Sum_probs=227.2
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHH---HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q ss_conf 99999999999987-3899899999---9809998999999999999999999999999985262899999999764321
Q gi|254780843|r 15 YIFILFFLFGGITS-LNSILVPKLQ---NSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGC 90 (420)
Q Consensus 15 ~i~~~ff~~g~~~~-~~~~~~p~l~---~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ 90 (420)
.+....|..+|..+ ..+|+.+.+. +||++|.+|.+++..+-..+.++..++.|.+.||||+|++...+++..++-+
T Consensus 4 ~~S~~~F~lsF~~W~~~~~L~~~~~~G~~dl~Ls~~Q~~~~~~~p~~~g~~~R~~~G~l~d~~GpR~~~~~~~~~~~IP~ 83 (472)
T TIGR00886 4 FFSWFGFFLSFLVWFAFSPLAVQIIKGKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRKTTTLSLLLLAIPC 83 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf 45788999999999998777865415763314799999999999999999999998863477671899999999999999
Q ss_pred HCCHHCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH---HHHH--
Q ss_conf 00000013--2024678999887775678887653100001230357887766443110000345478888---8641--
Q gi|254780843|r 91 ILFTATIE--ITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGS---VLML-- 163 (420)
Q Consensus 91 ll~~~a~~--~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~---~l~~-- 163 (420)
+..+++.. ..+|..+.+.|++.|++.+.+ ..+...+++++|+++.|.++++.....+.|..+...+.. .+..
T Consensus 84 ~~~~~~~~~p~~s~~~L~~~rlf~Gi~Gg~F-a~~~~~~s~fFp~~~~GtA~gl~aG~GN~G~~~~~~~~Pa~f~i~~~~ 162 (472)
T TIGR00886 84 LLAGLAVQDPSTSYSVLLLLRLFIGIAGGSF-ASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPALFAIIASL 162 (472)
T ss_pred HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9998412689989999999999996755468-876656630688220146758861432678999999999999999986
Q ss_pred -------------CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH---H---------HHHH-------HHHHHCCC
Q ss_conf -------------23420467765555577898886420011211001---3---------4555-------54321012
Q gi|254780843|r 164 -------------GNLASPNTSMLADTMKDYQTDTARVISQMYLVLAI---I---------LFLA-------TWLCWMQR 211 (420)
Q Consensus 164 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---------~~~~-------~~~~~~~~ 211 (420)
....|++............................ . .... .....+.+
T Consensus 163 ~~~~f~G~p~~F~~~~~~g~~~~~~~~~i~~~~~~l~~~~~~~~~~~~ws~r~~~ARGl~v~~~~~~~~~~~~~~~~~~~ 242 (472)
T TIGR00886 163 IKGAFGGLPQTFDAHLAWGWAFVIVPALILLLIALLIFFVVADTPPGKWSERHKSARGLEVTTLKDDYFLLIMNLPATAK 242 (472)
T ss_pred HCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCHHCCCCCCCC
T ss_conf 22112789840110136504467698999999999999999862467644577655775410335430320102577754
Q ss_pred CCCH-----------------------------------HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 3101-----------------------------------23321000111122211111110001110001355677899
Q gi|254780843|r 212 NSFA-----------------------------------DHKRNHISFLKTLDILANPRFTMGAVCIFLYVGAEVAIGSI 256 (420)
Q Consensus 212 ~~~~-----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (420)
.... ++-.......+..+..+++..|.....+.+..+.+.+....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~~~l~Y~~tFGsflg~~s~ 322 (472)
T TIGR00886 243 LSVKSARLSKIAFLVAALKVVVEPLLGTEALATYNIWVLNAIIESLSLKEQLKVFRDKHTWILALLYSVTFGSFLGVSSI 322 (472)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHCCHHHHHHHH
T ss_conf 45201003677767754223210212133233443577788741556432798743631477776565224069999999
Q ss_pred HHH---HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHC-----CCHHHHHHHHHHHHHHHHHH-CC----
Q ss_conf 998---754201222101246888999987643100111111000000-----00012455554567689962-23----
Q gi|254780843|r 257 MAN---YLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSA-----EKTLCAFATTACSLVILSSY-TT---- 323 (420)
Q Consensus 257 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-~~---- 323 (420)
++. |.. +.++.+..+.+.+.+.........|+.++.++||.+. .|.........+.+...... ..
T Consensus 323 ~~~vfl~~~--~~fg~~~~~aG~~a~~~~~~g~~~RP~GG~lsD~~gg~~g~~ar~~~~~~~~~~~g~~~~~~~~~~~~~ 400 (472)
T TIGR00886 323 FAMVFLLFK--DQFGLSKVQAGAYASLGGLLGLLARPLGGLLSDRLGGRFGTRARKLLMSFLGVAMGAALVVLGLVGPGS 400 (472)
T ss_pred HHHHHHHHC--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 988998741--679988733999999999898886376668998726866824999999999999987655330016886
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf ---3689999999999999999999999996301
Q gi|254780843|r 324 ---GFISGWSLIAVGLFNSIMFPTIFSLASASLE 354 (420)
Q Consensus 324 ---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 354 (420)
.......+..+.++.+......+.+.....|
T Consensus 401 ~~~l~~~~~~~~~~~~f~~~GnGs~F~~vP~~~~ 434 (472)
T TIGR00886 401 SGSLAVFIVLFVALFFFVGAGNGSTFALVPHIFR 434 (472)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
T ss_conf 4058899999999999863310654032243262
No 61
>TIGR00890 2A0111 Oxalate/Formate Antiporter; InterPro: IPR004741 Oxalate/formate antiporters and many, as yet, uncharacterised proteins belong to this group.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=99.95 E-value=2.9e-25 Score=142.96 Aligned_cols=382 Identities=12% Similarity=0.043 Sum_probs=248.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
Q ss_conf 9999999999999999873899899999980999-----89999999999999999999999999852628999999997
Q gi|254780843|r 11 CTKIYIFILFFLFGGITSLNSILVPKLQNSFSLT-----YLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLI 85 (420)
Q Consensus 11 ~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s-----~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~ 85 (420)
+..+-..++.+..+..+ ..+-+.|.+.+.|+++ ..+...-.+.+.++.+++++.+|.+.||||+|.+.+.|.++
T Consensus 4 ~~~~g~~~m~~~~g~~Y-tW~L~~~~l~~~l~~~~~Pdm~~a~~~~ft~~~~~~a~s~~~gG~~~d~fGpR~~~mlggil 82 (429)
T TIGR00890 4 LVLVGTVIMCFVSGYVY-TWTLLAPPLGRKLGVKMYPDMVSAVAVSFTLLLIVLAVSQPVGGKLADKFGPRLVAMLGGIL 82 (429)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHH
T ss_conf 99999999999999877-45544578887507888862268999999999999862222124221000663889999999
Q ss_pred HHHHH--HCCHHCCCCCHHHHHHHHHH-HHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 64321--00000013202467899988-7775678887653100001230357887766443110000345478888864
Q gi|254780843|r 86 MSLGC--ILFTATIEITTFKVFLIALC-ILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLM 162 (420)
Q Consensus 86 ~~i~~--ll~~~a~~~~~~~~~~~~~~-i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 162 (420)
..+|. ...+. .+|+..+++... +.++|.+..+.........|+|+ |||.+.++...+++.|...-..+-..++
T Consensus 83 ~~~G~Gs~~~a~---~~s~~~LyL~~G~l~s~G~Gi~Yg~al~tA~kWFPD-k~GLA~G~~~~GyGlGs~~~~PL~~~~~ 158 (429)
T TIGR00890 83 LGLGFGSIFAAL---ADSLAALYLTYGVLASAGVGIVYGIALSTAVKWFPD-KRGLASGIIIGGYGLGSLVLSPLITSVL 158 (429)
T ss_pred HHHHHHHHHHHH---HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 997688999875---021899999987887799999999897203122655-3038999999986478886303577633
Q ss_pred H---CCCCCHHHHH--------HHHHHHHHHHHHHHHHCCCCCC-CHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCC
Q ss_conf 1---2342046776--------5555577898886420011211-00134555543210123101233210001111222
Q gi|254780843|r 163 L---GNLASPNTSM--------LADTMKDYQTDTARVISQMYLV-LAIILFLATWLCWMQRNSFADHKRNHISFLKTLDI 230 (420)
Q Consensus 163 ~---~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (420)
. .......+.. ...................... .......+.....+++++.+++.+..++..+..+.
T Consensus 159 ~PldyrvndqGfftqedl~~~~~~aF~~~G~~~l~~i~~~a~~~~~P~~~WlPkG~~~E~~~~~~~~~~~~~~d~~~~~~ 238 (429)
T TIGR00890 159 EPLDYRVNDQGFFTQEDLLEGVEAAFVYMGIVALLVIVLLAFLIKYPPGDWLPKGIHVEEEQEVKKSIEVSEKDYTVAEM 238 (429)
T ss_pred CCHHCEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHH
T ss_conf 60210032564200455664579999999999999999999987078866676656520033134002300023311776
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHH
Q ss_conf 11111110001110001355677899998754201222-10124688899998764310011111100000000012455
Q gi|254780843|r 231 LANPRFTMGAVCIFLYVGAEVAIGSIMANYLMRHDTLH-LDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFA 309 (420)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
.|.+..|.......+..............|-. .+. .+........+...+....+|++.+.++||.++.+.+....
T Consensus 239 lr~~~fWvL~~~f~~~a~~~L~~~g~~~~yg~---~L~~~~~g~l~~~vs~~~~~Ng~~R~~~G~~sDk~gr~~~m~~~~ 315 (429)
T TIGR00890 239 LRTPQFWVLYVSFFLAAVSGLLLIGLLKPYGR---SLGDLDVGALVLAVSIISLFNGGGRPVLGAVSDKIGRLKTMSIVF 315 (429)
T ss_pred HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 42336999999999988899999999999888---888889999999999999999888999999974310055667776
Q ss_pred HHHHHHHHHHHHCCHHH---H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH--------------HHHHHHHH
Q ss_conf 55456768996223368---9-999999999999999999999996301565-69999--------------99999999
Q gi|254780843|r 310 TTACSLVILSSYTTGFI---S-GWSLIAVGLFNSIMFPTIFSLASASLEDQA-SGGSG--------------IICTTISG 370 (420)
Q Consensus 310 ~~~~~~~~~~~~~~~~~---~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~--------------~~~~~~~g 370 (420)
.+..+..+......... . ....++.++..|..+....++..|.++++. +.--+ .+....++
T Consensus 316 ~isav~~~~~~~~~~~~n~V~FlA~~~~~~ft~Gg~~~lFP~l~s~~FG~~~~~~NYG~~y~A~aGyrireymntfqs~a 395 (429)
T TIGR00890 316 GISAVGMLAMLFIPKISNDVLFLALVALVAFTWGGTFSLFPSLVSDIFGPKYSAANYGLLYTAKAGYRIREYMNTFQSVA 395 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89999999999899874228999999999842301321110221000010221453037876331368999988888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999961237999999999999
Q gi|254780843|r 371 GVIIPLGVGYLVDIASLRDAMFVPAVCYII 400 (420)
Q Consensus 371 ~~i~p~i~G~l~d~~g~~~~~~~~~~~~~~ 400 (420)
+.++..+.+.+....|++..|+++++..+.
T Consensus 396 gi~gg~~~~~~~~~~G~~~~f~~~~~~~l~ 425 (429)
T TIGR00890 396 GIFGGLIASLVLTEIGFKVTFLVTAALALL 425 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999888499999999999999
No 62
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.95 E-value=2.2e-23 Score=133.51 Aligned_cols=382 Identities=12% Similarity=0.056 Sum_probs=236.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----CHHH-HHHHHHHHHHHH
Q ss_conf 9999999999987389989999998099989999999999999999999999999852-----6289-999999976432
Q gi|254780843|r 16 IFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRY-----GYIK-GICTGLLIMSLG 89 (420)
Q Consensus 16 i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~-----Grr~-~l~~~~~~~~i~ 89 (420)
+..++|..|+-..+....+|.+-+|-|+|.+++|++ +...+.+.+ .+.++++.||+ |||| -++..-...++.
T Consensus 4 ~~~Lyfa~GlP~~~~~~~l~~~Lr~~Gvsl~~IGl~-~ll~LPw~l-KfLWAP~vDr~~~p~lG~rR~Wil~~Q~~l~~~ 81 (402)
T PRK11902 4 MLVLGFASGLPLALTSGTLQAWMTVEGLDIQTIGFF-SLVGQAYIF-KFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAAS 81 (402)
T ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHH-HHHHHHHHH-HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 999999876439999999999998879988999999-999999999-999988886407766887407999999999999
Q ss_pred HHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCH
Q ss_conf 10000001320246789998877756788876531000012303578877664431100003454788888641234204
Q gi|254780843|r 90 CILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASP 169 (420)
Q Consensus 90 ~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~ 169 (420)
...++...-.++++.+....++..+..+..+.+...+..|..++++|+...+....++.+|..++.-..-.+.+...+|.
T Consensus 82 l~~la~~~p~~~~~~l~~~~~l~af~sAtqDIA~Da~~ie~l~~~e~g~~n~~~v~Gyr~g~ligGg~~l~l~~~~~gW~ 161 (402)
T PRK11902 82 IMAMAFLPPHSALWPLALLAVLVAFLSASQDIVFDAYSTDVLRPEERGAGAAVKVLGYRLAMLVSGGLALILADRVLGWG 161 (402)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99998079666799999999999999999999998999985599889999999999999999998999999999888699
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 67765555577898886420011211001345555432101231012332100011112221111111000111000135
Q gi|254780843|r 170 NTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYVGA 249 (420)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (420)
.................... ++++++++..++..+....+.+...+++..+.......++...
T Consensus 162 ~~~~~la~l~ll~~~~~l~~-----------------~e~~~~~~~~~~~~~~~~~~~~~f~~r~~~~~~l~fillyrlg 224 (402)
T PRK11902 162 NTYLLMAGLMLAGALTTLWA-----------------PEPEVPARAPRSLGEAVVGPLRDFFSRRGAWWLLLLIVLYKLG 224 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHC-----------------CCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 99999999999999999928-----------------8877544241037899999999999726799999999999989
Q ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH-HHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHH---HCCHH
Q ss_conf 56778999987542012221012468889999-876431001111110000000001245555456768996---22336
Q gi|254780843|r 250 EVAIGSIMANYLMRHDTLHLDGISAGQHTAIY-WGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSS---YTTGF 325 (420)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 325 (420)
..........+.. ++.|.+..+.+...... ....+.+...++...+|++.++.............+... .....
T Consensus 225 d~~~~~m~~pFll--~dlG~s~~~ig~~~~~~G~~a~i~G~~lGG~l~~r~g~~~~L~~~~~~~~l~~l~~~~la~~~~~ 302 (402)
T PRK11902 225 DAFAGSLSTTFLI--RGAGFSAGEVGIVNKTLGLAATIVGALAGGSLMVRLGLYRSLMLFGVLQAVSNLGYWLLAVTPKH 302 (402)
T ss_pred HHHHHHHHHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 9999998789999--75299999999998799999999999999999999738999999999999999999999966775
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf --89999999999999999999999996301565-69-999999999999999999999999612379999999999999
Q gi|254780843|r 326 --ISGWSLIAVGLFNSIMFPTIFSLASASLEDQA-SG-GSGIICTTISGGVIIPLGVGYLVDIASLRDAMFVPAVCYIII 401 (420)
Q Consensus 326 --~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~g~~i~p~i~G~l~d~~g~~~~~~~~~~~~~~~ 401 (420)
........-.++.+......++..++...++. ++ .+.......++..+...+.|.+.|+.||..-|++...+.+..
T Consensus 303 ~~~l~~~i~~~~~~~g~~~~a~~a~~m~l~~~~~~atqyal~~sl~~l~~~~~~~~sG~la~~~Gy~~fFi~~~~~~ip~ 382 (402)
T PRK11902 303 LWLMGLAIGVENLCGGMGTAAFVALLMALCNRSFSATQYALLSALASVGRVYVGPTSGYLVEALGWPGFYLGTVLIALPG 382 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf 79999999999999999999999999998288663999999999999989998843999999819699999999999999
Q ss_pred HHHHHHHHHHHHCCCCC
Q ss_conf 99999853111020127
Q gi|254780843|r 402 AIYGIYCCYKENNFEQN 418 (420)
Q Consensus 402 ~~~~~~~~~~~~~~~~~ 418 (420)
.+...+..+|-||.|++
T Consensus 383 l~ll~~~~~~~~~~~~~ 399 (402)
T PRK11902 383 LALLWLMRNTIDRYEAQ 399 (402)
T ss_pred HHHHHHHHHHHHHHHHH
T ss_conf 99999988898876654
No 63
>TIGR01272 gluP glucose/galactose transporter WARNING; InterPro: IPR005964 This model describes the glucose/galactose transporter in bacteria. Putative transporters in bacterial species have been isolated by functional complementation, which restored its functional activity .; GO: 0005354 galactose transmembrane transporter activity, 0005355 glucose transmembrane transporter activity, 0015757 galactose transport, 0015758 glucose transport, 0009276 1-2nm peptidoglycan-based cell wall, 0016021 integral to membrane.
Probab=99.95 E-value=1.5e-25 Score=144.38 Aligned_cols=309 Identities=37% Similarity=0.604 Sum_probs=250.0
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHH---
Q ss_conf 01320246789998877756788876531000012303578877664431100003454788888641234204677---
Q gi|254780843|r 96 TIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTS--- 172 (420)
Q Consensus 96 a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~--- 172 (420)
++....|...+...|+.+.|....+.+.++++.-..+.|...+++.+.+.++.++.+++|.+++.++-.........
T Consensus 4 ~a~~~~Y~~~L~aLFVlaSG~T~~Q~A~NPYv~iLG~~E~Aa~Rl~l~~~~N~l~~~~AP~~~~~L~L~~~~d~s~~~A~ 83 (322)
T TIGR01272 4 AASYRVYVLFLGALFVLASGLTILQVAANPYVSILGKIETAASRLALTQAFNSLGTTVAPLFGGVLILSGAGDLSMQVAT 83 (322)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 05799999999999999833788776431023105882147899999999876557888899999999999998899873
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH-----CCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 655555778988864200112110013455554321-----012310123321000111122211111110001110001
Q gi|254780843|r 173 MLADTMKDYQTDTARVISQMYLVLAIILFLATWLCW-----MQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYV 247 (420)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (420)
......-.........+..+++..+........... .-+++++...++++...++...+..+..+.....++.+.
T Consensus 84 a~pa~keqllaA~A~~v~~PYLllA~~laVLAi~~~~~~LP~~~~~~~~~~~~~~~~~~Kt~~~Q~~HL~LG~~g~FVYV 163 (322)
T TIGR01272 84 ANPAMKEQLLAAEAEKVKLPYLLLAGALAVLAIIFAFLKLPELQEADVNRSSSKDTTLQKTSAFQFTHLVLGALGIFVYV 163 (322)
T ss_pred CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEE
T ss_conf 07678888998878651666899999999999999984388767420012222100011103678888998787754100
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC-HHHCCCHHHHHHHHHHHHHHHHHHCCHHH
Q ss_conf 35567789999875420122210124688899998764310011111100-00000001245555456768996223368
Q gi|254780843|r 248 GAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILS-RFSAEKTLCAFATTACSLVILSSYTTGFI 326 (420)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (420)
+........+.+|..+.+..|.+..+.....+.++++.+.++..+.-..+ +....+.+........+..+....+++.+
T Consensus 164 G~EV~~G~~l~~f~~~~~~~Glp~~~a~~~~a~~~G~~~~G~~~G~Av~~n~I~~~~~La~~A~~a~lL~~~a~~T~G~v 243 (322)
T TIGR01272 164 GAEVSVGSFLVNFLSEAHVLGLPEDQAAHFVAYTWGGALVGRFIGSAVMRNKISQGRVLALNAFLAVLLVLVAVLTSGYV 243 (322)
T ss_pred CCHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHH
T ss_conf 00101335887406886164276677899999999999999999999875203313113899999999999998631379
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Q ss_conf 999999999999999999999999630156569999999999999999999999999612379999-999999999999
Q gi|254780843|r 327 SGWSLIAVGLFNSIMFPTIFSLASASLEDQASGGSGIICTTISGGVIIPLGVGYLVDIASLRDAMF-VPAVCYIIIAIY 404 (420)
Q Consensus 327 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~p~i~G~l~d~~g~~~~~~-~~~~~~~~~~~~ 404 (420)
..+....+|++++.+||++++++.+..++++...|++.+++..||++-|.+.|.+.|..|.+.+|. ++.+|+..+.+|
T Consensus 244 a~~~v~a~Gl~N~~MfP~IF~LAl~~LG~~T~~GS~~L~laI~GGAIvP~l~~~L~~~l~~~L~F~Gl~v~CY~yIlFY 322 (322)
T TIGR01272 244 AMWAVLALGLFNSIMFPTIFSLALNALGRHTSQGSGILILAIVGGAIVPLLQGSLADALGIQLAFLGLPVVCYLYILFY 322 (322)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC
T ss_conf 9999999988887764568999997412310124799999986367899999999886350025354669989988439
No 64
>KOG0254 consensus
Probab=99.95 E-value=2.9e-23 Score=132.95 Aligned_cols=164 Identities=17% Similarity=0.080 Sum_probs=128.0
Q ss_pred HHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHH-----CCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
Q ss_conf 59999999999999999--873899899999980-----9998--99999999999999999999999998526289999
Q gi|254780843|r 10 QCTKIYIFILFFLFGGI--TSLNSILVPKLQNSF-----SLTY--LQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGIC 80 (420)
Q Consensus 10 ~~~~i~i~~~ff~~g~~--~~~~~~~~p~l~~~~-----~~s~--~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~ 80 (420)
....+.....-+.+|.+ .+..++..+.++++. ..+. ++.+|+.+++.++.+++++++|+++|++|||+.++
T Consensus 44 ~~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~i~s~~~lga~~g~l~~g~l~d~~GRk~~l~ 123 (513)
T KOG0254 44 ILLALVAALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLL 123 (513)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_conf 99999999999996241222203788999984043234443046777679999999999999999999997843399999
Q ss_pred HHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf 99997643210000001320246789998877756788876531000012303578877664431100003454788888
Q gi|254780843|r 81 TGLLIMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSV 160 (420)
Q Consensus 81 ~~~~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 160 (420)
.+.+.+.+|.++++.+ +++..+.++|++.|+|.|........+++|..|++.|+...+..+.....|...+...+..
T Consensus 124 ~~~i~~~iG~ii~~~a---~~~~~l~~GR~l~G~g~G~~~~~~piyisEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~ 200 (513)
T KOG0254 124 LAVVLFLIGAIIIALA---PSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYG 200 (513)
T ss_pred HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999997---0499999999998545278766336776303765268899999999999999999998662
Q ss_pred HHHCCCCCHHHHHHHH
Q ss_conf 6412342046776555
Q gi|254780843|r 161 LMLGNLASPNTSMLAD 176 (420)
Q Consensus 161 l~~~~~~~~~~~~~~~ 176 (420)
......+|+.......
T Consensus 201 ~~~~~~~Wr~~~~~~~ 216 (513)
T KOG0254 201 TSKVYAGWRIPLGLAL 216 (513)
T ss_pred HCCCCCCHHHHHHHHH
T ss_conf 0245655899999999
No 65
>pfam03825 Nuc_H_symport Nucleoside H+ symporter.
Probab=99.94 E-value=6.9e-23 Score=131.02 Aligned_cols=373 Identities=14% Similarity=0.074 Sum_probs=206.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHCCHHC
Q ss_conf 999999999873899899999980999899999999999999999999999998526-2899999999764321000000
Q gi|254780843|r 18 ILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYG-YIKGICTGLLIMSLGCILFTAT 96 (420)
Q Consensus 18 ~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G-rr~~l~~~~~~~~i~~ll~~~a 96 (420)
..+|+.-+..+..-|..+..-++.|.|.+|+|++.++..+...+.++++|.++||++ |||++.++.+..++.....
T Consensus 9 ~~yFl~F~~~G~~~P~~~~yL~~~Gfs~~qIG~i~a~~~i~~iv~p~~wG~lADr~~~~~~vl~~~~~~~~~~~~~~--- 85 (400)
T pfam03825 9 VMMFLQLFIWGAWLVTLGSYMGMTGFAGAQIGLVYSSWGIAAIVMPFLSGIIADRWFSAERVLAVCHLIGAVALFGA--- 85 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---
T ss_conf 99999999999999999999860798999999999999999999999999998345647899999999999999999---
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf 13202467899988777567888765310000123035788776644311000034547888886412342046776555
Q gi|254780843|r 97 IEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSMLAD 176 (420)
Q Consensus 97 ~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~ 176 (420)
...++++.+.....+.........+...++..+..+++ +...+..-...++|.+.+....+.................
T Consensus 86 ~~~~~f~~~~~~~~~~~~~~~p~lpL~dsi~~~~l~~~--~~~Yg~iRlwGSiGfi~a~~~~g~~~~~~~~~~~~~~~~~ 163 (400)
T pfam03825 86 AQVTTFWPFFAVYLVNSLAYMPTLALTNSIAFANLRDP--VTDFPPIRVGGTVGWILASWPFVMWLVSLATVELSRWQLL 163 (400)
T ss_pred HHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC--CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_conf 98524999999999999998350578999999971275--6778720357649999999889999999501205679999
Q ss_pred HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 55778988864200112110013455554321012310123321000111122211111110001110001355677899
Q gi|254780843|r 177 TMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYVGAEVAIGSI 256 (420)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (420)
........... .....++.+++++.+++..+....+..+..|++.....................+
T Consensus 164 i~~~~~~ll~~--------------~~~~lp~~p~~~~~~~~~~~~~~~~~~~lLk~~~~~~Fl~~~~l~~~~h~~yy~F 229 (400)
T pfam03825 164 IAAGVSALLAG--------------YALTLPHTPAKRKADDSVDKLLGLDAFKLLKNPRMAVFFVFSFLLGAILQIYNVF 229 (400)
T ss_pred HHHHHHHHHHH--------------HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999--------------9973888887665554200020257999965914999999999999899999998
Q ss_pred HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCHHH------HHHH
Q ss_conf 9987542012221012468889999876431001111110000000001245555456768996223368------9999
Q gi|254780843|r 257 MANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYTTGFI------SGWS 330 (420)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 330 (420)
...|..+.. +.+....+...+.....-+......++..+|++.++++........+=..+......+. ....
T Consensus 230 ~s~yl~~~g--g~~~~~~~~~~~lgvvaEI~~f~~~~~ll~r~g~~~lll~a~~~~~lR~~l~a~~~~~~~~~~~~l~l~ 307 (400)
T pfam03825 230 ANAFLTNFV--GFAVKLASIVLSLGQVAEIIFMLTLPFFLKRFGIKVVMLVGVVAWALRFAFFAYGADPVPFGVALLLLS 307 (400)
T ss_pred HHHHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 999999847--726779999999999999999999999999848999999999999999999994267403799999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH-H-HHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHH
Q ss_conf 999999999999999999996301565-69999999-9-99999999999999999612------379999999999999
Q gi|254780843|r 331 LIAVGLFNSIMFPTIFSLASASLEDQA-SGGSGIIC-T-TISGGVIIPLGVGYLVDIAS------LRDAMFVPAVCYIII 401 (420)
Q Consensus 331 ~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~-~~~g~~i~p~i~G~l~d~~g------~~~~~~~~~~~~~~~ 401 (420)
..+-|+..+..+........+..|++. +++-+... . ..+|+++|..+.|++.|++. |..-+.+.+...+++
T Consensus 308 q~LHg~tfg~f~~a~~~~v~~~~p~~~ra~~Q~l~~~~~~G~g~~iG~~~~G~l~~~f~~~~~~~w~~~w~~~~~~~~~~ 387 (400)
T pfam03825 308 MIVHGVAYDFFNITGYIFVDKEVPKDIRASAQGLFNLMINGVGNVLGSILSGMLVGMFTTDGSVDWQTLWLVFAGMALAL 387 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999868855387999999999970899999999999999970677687399999999999999
Q ss_pred H-HHHHHHHHH
Q ss_conf 9-999985311
Q gi|254780843|r 402 A-IYGIYCCYK 411 (420)
Q Consensus 402 ~-~~~~~~~~~ 411 (420)
+ +|.++..+|
T Consensus 388 ~~~f~~~f~~~ 398 (400)
T pfam03825 388 AVLFMLFFRYP 398 (400)
T ss_pred HHHHHHHHCCC
T ss_conf 99999983688
No 66
>KOG0255 consensus
Probab=99.94 E-value=9.4e-23 Score=130.37 Aligned_cols=333 Identities=14% Similarity=0.025 Sum_probs=186.8
Q ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99809998999999999999999999999999985262899999999764321000000132024678999887775678
Q gi|254780843|r 38 QNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATIEITTFKVFLIALCILAIGVV 117 (420)
Q Consensus 38 ~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~ 117 (420)
.+.+..+.....+.++.+++|..+++++.|.++||+|||++++.++++..++.+..+++ ++++.+.+.|++.|++.+
T Consensus 110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a---~~~~~~~~~Rfl~G~~~~ 186 (521)
T KOG0255 110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFA---PNYWMFLIFRFLSGFFGS 186 (521)
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHH
T ss_conf 65741539999999999999999999999988774376069999999999988999973---309999999999998631
Q ss_pred HHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
Q ss_conf 88765310000123035788776644311000034547888886412342046776555557789888642001121100
Q gi|254780843|r 118 IIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSMLADTMKDYQTDTARVISQMYLVLA 197 (420)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (420)
........+..|+.++++|+..+.+ ......+...++...+.+.. .|+...+............+...........
T Consensus 187 ~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~---~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~ 262 (521)
T KOG0255 187 GPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR---DWRWLFWIISIPSGLFLLLWFLPPESPRWLL 262 (521)
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_conf 0899999999852265576688999-87877999999999999987---2899999999999999999998765877999
Q ss_pred HH---HHHHHHHHHCCC----CCCHHH-HHHHCCCCC-----------CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 13---455554321012----310123-321000111-----------12221111111000111000135567789999
Q gi|254780843|r 198 II---LFLATWLCWMQR----NSFADH-KRNHISFLK-----------TLDILANPRFTMGAVCIFLYVGAEVAIGSIMA 258 (420)
Q Consensus 198 ~~---~~~~~~~~~~~~----~~~~~~-~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (420)
.. ........+..+ .....+ .+......+ .....+.+........ ............+..
T Consensus 263 ~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~-~~~~~~~~~~~y~gl 341 (521)
T KOG0255 263 SKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLY-LLFIWFVFSLVYYGL 341 (521)
T ss_pred HHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_conf 8387777999999987543555665888999988877665215663229999805899999999-999999988889778
Q ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCHH----HHHHHHHHH
Q ss_conf 8754201222101246888999987643100111111000000000124555545676899622336----899999999
Q gi|254780843|r 259 NYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYTTGF----ISGWSLIAV 334 (420)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 334 (420)
.......+.+..... ..................++.+|+...........+..+........ .......+.
T Consensus 342 --~~~~~~lg~~~~~~~---~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (521)
T KOG0255 342 --SLNVSGLGGNIYLNF---TLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLG 416 (521)
T ss_pred --HHHHHHCCCHHHHHH---HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_conf --642430363088999---999999999988412134214189999999999999999999984444206999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999963015656--9999999999999999999999999
Q gi|254780843|r 335 GLFNSIMFPTIFSLASASLEDQAS--GGSGIICTTISGGVIIPLGVGYLVD 383 (420)
Q Consensus 335 g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~i~p~i~G~l~d 383 (420)
.++.+..+...+....+..|...+ ..+.....+.+|+.++|.+.-....
T Consensus 417 ~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~ 467 (521)
T KOG0255 417 KFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ 467 (521)
T ss_pred HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999877250899899999999999999999999999998
No 67
>KOG2615 consensus
Probab=99.94 E-value=8.9e-25 Score=140.51 Aligned_cols=364 Identities=14% Similarity=0.050 Sum_probs=196.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCCCCH
Q ss_conf 99999873899899999980999899999999999999999999999998526289999999976432100000013202
Q gi|254780843|r 22 LFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATIEITT 101 (420)
Q Consensus 22 ~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~~~~ 101 (420)
++.+.+.++-.+.-...++-+.+..-.|.+.|.|.+..++.++.+|.++||+|||+++.+|++..++..++.+.+ .+
T Consensus 44 L~~~~~~~V~~F~~a~~~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S---~~ 120 (451)
T KOG2615 44 LYPFVVFMVRDFNIAIGEPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALS---RN 120 (451)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH---HH
T ss_conf 257788854788870178655530012247658999999766554225665076189999999999999999988---87
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-C--CCCCHHHHHHHHHH
Q ss_conf 46789998877756788876531000012303578877664431100003454788888641-2--34204677655555
Q gi|254780843|r 102 FKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLML-G--NLASPNTSMLADTM 178 (420)
Q Consensus 102 ~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~--~~~~~~~~~~~~~~ 178 (420)
|..+...|++.|+..+... ...++++|..++++|+..++.....+++|.++||.+++.+.. . .+..+.... ....
T Consensus 121 F~afv~aR~l~Gi~kgnl~-v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP-~~~v 198 (451)
T KOG2615 121 FAAFVLARFLGGIFKGNLS-VIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALP-CLLV 198 (451)
T ss_pred HHHHHHHHHHHHHCCCCHH-HHHHHHHHHCCHHHCCCEEEEEEHHHHCCHHHCCHHHHHHHHHHHHHCCCCHHHH-HHHH
T ss_conf 9999999986355067569-9999998625854315312441045430311010456678764765246806789-9999
Q ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC--CHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH---HHHHHHHH
Q ss_conf 77898886420011211001345555432101231--01233210001111222111111100011100---01355677
Q gi|254780843|r 179 KDYQTDTARVISQMYLVLAIILFLATWLCWMQRNS--FADHKRNHISFLKTLDILANPRFTMGAVCIFL---YVGAEVAI 253 (420)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 253 (420)
...... -.+....+.... .+.....+...+..+ +.+.+..+..........+++........... ....+...
T Consensus 199 ~i~a~~-~v~~~~~~lpET-L~~rk~~~~~~~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l 276 (451)
T KOG2615 199 FILAAG-DVTFFPWFLPET-LPLRKRNDEHSTLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLEL 276 (451)
T ss_pred HHHHHH-HHHHHHHHCCCC-CCCHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 999998-899888857755-640431244355544421266624636655556522853100699999999999999999
Q ss_pred HHHHHHHH--HHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH-CCC-HHHHHHHHHHHHHHHHHHC-CHHHHH
Q ss_conf 89999875--420122210124688899998764310011111100000-000-0124555545676899622-336899
Q gi|254780843|r 254 GSIMANYL--MRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFS-AEK-TLCAFATTACSLVILSSYT-TGFISG 328 (420)
Q Consensus 254 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~ 328 (420)
......+. ......+++..+.+...+.....+...........++.. ..+ ..........-...+.... ......
T Consensus 277 ~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~ 356 (451)
T KOG2615 277 FSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLY 356 (451)
T ss_pred HHHHHHHHHHHHCCCCCCCHHHHEEEEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_conf 99997537876047668772352145200008999878740124453346405679999999999999980466530122
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Q ss_conf 999999999999999999999963015656-999999-999999999999999999961-2379999
Q gi|254780843|r 329 WSLIAVGLFNSIMFPTIFSLASASLEDQAS-GGSGII-CTTISGGVIIPLGVGYLVDIA-SLRDAMF 392 (420)
Q Consensus 329 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~g~~i~p~i~G~l~d~~-g~~~~~~ 392 (420)
....+..+......+.+..+.....|+..+ ...++. ..+.++-++||.+.|.+.... +-+.++.
T Consensus 357 ~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~~~~~a~~ 423 (451)
T KOG2615 357 LGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQGAQPAYI 423 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEE
T ss_conf 8999999998876688999997407811005788899989999998600322105777358985364
No 68
>PRK11195 major facilitator family transporter; Provisional
Probab=99.93 E-value=9.5e-23 Score=130.33 Aligned_cols=397 Identities=12% Similarity=0.047 Sum_probs=217.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHC
Q ss_conf 99999999999999873899899999980999899999999999999999999999998526289999999976432100
Q gi|254780843|r 13 KIYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCIL 92 (420)
Q Consensus 13 ~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll 92 (420)
+..++..=|+..|.++.+=.+.-.+-++.+.++....++...|.+.|.+.++++|.++||+.+++++.+.-.+-.+++++
T Consensus 5 F~~l~~tQfl~AfnDN~ll~~~i~ll~~~~~~~~~~~ll~~~FiLPfvLfsa~aG~lADr~~K~~vm~~~~~iki~~~~~ 84 (415)
T PRK11195 5 FYTIMAAQFFSALADNALLFAAIALLKELHAPDWSQPLLQMVFVLAYVLLAPFVGAFADSFPKGRVMFIANGIKLAGCLL 84 (415)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 09999999996877899999999999965581899999999999999999764778766153289999999999999999
Q ss_pred CHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHH
Q ss_conf 00001320246789998877756788876531000012303578877664431100003454788888641234204677
Q gi|254780843|r 93 FTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTS 172 (420)
Q Consensus 93 ~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~ 172 (420)
+.+.. .. ....++.|.+.+...|+-+.++.|..++++-.++.++..+....+...|..+++.+.+.........
T Consensus 85 ~~~g~----~~--ll~~~l~g~~sA~f~PaKYgiLpell~~~~L~~aNglve~~T~~AILlGti~gg~L~~~~~~~~~~~ 158 (415)
T PRK11195 85 MLFGA----HP--LLAYGLVGLGAAAYSPAKYGILTELLPGDKLVKANGWIEGSTIAAILLGTVLGGVLADPHVASHLLA 158 (415)
T ss_pred HHHHH----HH--HHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_conf 99999----99--9999999998898450998789987594020566629999999999999999999973310001320
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCHHHHH-HHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 65555577898886420011211001345-55543210123101233210001111222111111100011100013556
Q gi|254780843|r 173 MLADTMKDYQTDTARVISQMYLVLAIILF-LATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYVGAEV 251 (420)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (420)
............ ...+...+........ .+......++.+.+.....++..+..+...+++..+........+.+...
T Consensus 159 ~~~~~~~~~~~a-~~vv~~~~~la~~~sl~IP~~~a~~~~~~~~~~~l~~~~~~~~~~L~~~~~~~~sllg~s~FW~vga 237 (415)
T PRK11195 159 HLPLIDTPAEAA-LAVIALAYALAALANLFIPDTGARYPGQSWNPIALTRDFADACRVLWRDKLGQISLAVTTLFWGAGA 237 (415)
T ss_pred CCHHHHHHHHHH-HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 110101159999-9999999999999967699999767777778778999999999999867399999999999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Q ss_conf 77899998754201222101246888999987643100111111000000000124555545676899622336899999
Q gi|254780843|r 252 AIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYTTGFISGWSL 331 (420)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (420)
......+.+.. ...+.+....+.+......+...+....++..++....+..-................+.+.....+
T Consensus 238 ~l~~~~~~~a~--~~Lg~~~~~~~~Lla~~avGIaiGs~la~~l~~~~~~~~~lP~Gi~mg~~v~~~~~~~~~~~a~~ll 315 (415)
T PRK11195 238 TLRFLVLKWAP--VALGIDLSTAAYLQAVVAIGIAVGAGAAARLVPLRTVLRVLPAGILMGVVVILMALQHSLLPAYPLL 315 (415)
T ss_pred HHHHHHHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99998999999--9859968899999999999999999999999379722063229999999999999860079999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Q ss_conf 9999999999999999999630156--5699-9999999999999999999999961237999999999-9999999998
Q gi|254780843|r 332 IAVGLFNSIMFPTIFSLASASLEDQ--ASGG-SGIICTTISGGVIIPLGVGYLVDIASLRDAMFVPAVC-YIIIAIYGIY 407 (420)
Q Consensus 332 ~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~g~~i~p~i~G~l~d~~g~~~~~~~~~~~-~~~~~~~~~~ 407 (420)
.++|.+.+...-..+++..+..|+. ++.. +.-+....++-.+...+.+ +.-..|......+...+ +...+.+.++
T Consensus 316 ~llG~~gG~fvVPLnAliQ~r~~~~~~aGr~iA~qN~~~n~~m~~~~~~~~-~~~~~g~~~~~~~~~~g~~~~~~~~~~~ 394 (415)
T PRK11195 316 ILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYS-LLVKLGVPVVPVIVGFGLFVALAMWLLW 394 (415)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHCCCCCEEEEHHHHHHHHHHHHHHHHH-HHHHCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 999997253001656998754722024566532001999999999999999-9998799799999999999999999999
Q ss_pred HHHHHHCCCCCC
Q ss_conf 531110201279
Q gi|254780843|r 408 CCYKENNFEQNT 419 (420)
Q Consensus 408 ~~~~~~~~~~~~ 419 (420)
.-+|+|..++|.
T Consensus 395 ~~~~~~~~~~~~ 406 (415)
T PRK11195 395 RWHRRNQRQFDS 406 (415)
T ss_pred HHHHHCCCCCCH
T ss_conf 998710342665
No 69
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.93 E-value=2.4e-21 Score=123.32 Aligned_cols=345 Identities=11% Similarity=-0.014 Sum_probs=212.9
Q ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH-HHHHHHHHHHHHHHCCHHCCCCCHHH
Q ss_conf 99873899899999980999899999999999999999999999998526289-99999997643210000001320246
Q gi|254780843|r 25 GITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIK-GICTGLLIMSLGCILFTATIEITTFK 103 (420)
Q Consensus 25 ~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~-~l~~~~~~~~i~~ll~~~a~~~~~~~ 103 (420)
+..++..|..|..-++.|+|.+|+|.+.++..+...+.+++.|+++||.++|+ .+........+..... ....++++
T Consensus 18 ~~~G~~~Pf~~l~L~~~G~s~~~IGii~a~~~~~~~v~~~~~~~l~d~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~f~ 95 (383)
T PRK11128 18 FAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVFRFLGSLLIAPRVKDPSQLIPALRLLALLTLIFAVAF--WFGAHSFW 95 (383)
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH--HHHHHHHH
T ss_conf 9999999999999973898989999999999999999988899998634434899999999999999999--99876899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf 78999887775678887653100001230357887766443110000345478888864123420467765555577898
Q gi|254780843|r 104 VFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSMLADTMKDYQT 183 (420)
Q Consensus 104 ~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 183 (420)
...+...+.+.......|...++..+...+ ++...+..-...++|..++....+.+.+...................
T Consensus 96 ~~~~~~~l~~~~~~~~~pl~dsl~~~~~~~--~~~~YG~iRlwGSiGf~~~~l~~G~l~~~~g~~~i~~~~~~~~~~~~- 172 (383)
T PRK11128 96 LMFVAIGLFNLFFSPLVPLTDALANTWQKQ--IGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASML- 172 (383)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH-
T ss_conf 999999999999844763799999999655--45641588899889999999999999987270179999999999999-
Q ss_pred HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88642001121100134555543210123101233210001111222111111100011100013556778999987542
Q gi|254780843|r 184 DTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYVGAEVAIGSIMANYLMR 263 (420)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (420)
...... ++..++++.++++.+..+..+..+++..+..................+...|..
T Consensus 173 --l~~l~~-----------------~~~~~~~~~~~~~~~~~~~~~llk~~~~~~fll~~~l~~~sh~~~y~F~~i~~~- 232 (383)
T PRK11128 173 --LGQLLR-----------------PTVMPQGESRQQESAGPAWLALLKEPTVWRFLLCVSLIQGSHAAYYSFSAIYWQ- 232 (383)
T ss_pred --HHHHHC-----------------CCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_conf --999967-----------------877864333234556520999870818999999999999998999999999999-
Q ss_pred HCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHHHHH
Q ss_conf 0122210124688899998764310011111100000000012455554567689962233-689999999999999999
Q gi|254780843|r 264 HDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYTTG-FISGWSLIAVGLFNSIMF 342 (420)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~ 342 (420)
+.|.+....+...+.....-+......++..+|++.++++........+=..+....++ +.......+-++..+..+
T Consensus 233 --~~G~s~~~iG~lw~~~v~aEI~~f~~~~rl~~r~g~~~ll~ia~~~~~lRw~l~a~~~~~~~~~~~QlLHg~tFg~~~ 310 (383)
T PRK11128 233 --AAGYSASTIGYLWSLGVVAEVLIFAFSKRLFRRWSARDLLLLSAVCGVIRWGLMGSTTALPWLILVQILHCGTFAVCH 310 (383)
T ss_pred --HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_conf --859967399999999999999999999999998298999999999999999999986039999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999963015656999999--999999999999999999961237999999999
Q gi|254780843|r 343 PTIFSLASASLEDQASGGSGII--CTTISGGVIIPLGVGYLVDIASLRDAMFVPAVC 397 (420)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~i~p~i~G~l~d~~g~~~~~~~~~~~ 397 (420)
........+..+++..+..+.. ....+|.+++..+.|++.|+.|. .+|+.+++.
T Consensus 311 ~a~i~~i~~~~~~~~~~~Q~ly~~~~~Glg~~ig~~~~G~ly~~~G~-~~f~~ma~~ 366 (383)
T PRK11128 311 LAAIRYIAARPGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALI 366 (383)
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH-HHHHHHHHH
T ss_conf 99999998569422789999999999889999999999999998567-899999999
No 70
>TIGR00899 2A0120 sugar efflux transporter; InterPro: IPR004750 This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both Gram-negative and Gram-positive bacteria.; GO: 0015542 sugar efflux transmembrane transporter activity, 0008643 carbohydrate transport, 0016021 integral to membrane.
Probab=99.93 E-value=2.1e-21 Score=123.61 Aligned_cols=363 Identities=15% Similarity=0.071 Sum_probs=253.8
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH-HHHHHHHHHHHCCHH
Q ss_conf 99999999987389989-9999980999899999999999999999999999998526289999-999976432100000
Q gi|254780843|r 18 ILFFLFGGITSLNSILV-PKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGIC-TGLLIMSLGCILFTA 95 (420)
Q Consensus 18 ~~ff~~g~~~~~~~~~~-p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~-~~~~~~~i~~ll~~~ 95 (420)
+..|+.|+.-...-|.+ -.++||.+.++..+||..|...+.....+...+.-+||-|.||.++ .++++-.+.+++++.
T Consensus 4 l~aFL~g~Agalq~PtLS~fL~~E~~~~p~~vG~f~t~~ai~gi~vs~~la~~sD~~gdr~~Lil~cclla~l~~~lfA~ 83 (377)
T TIGR00899 4 LVAFLTGIAGALQTPTLSLFLSEEVRARPAMVGLFYTGSAIVGILVSQLLATRSDKQGDRKKLILFCCLLAVLACLLFAW 83 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 78899999999876899999988750285111143455589999999999861113477189999999999999999998
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHH--HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHH
Q ss_conf 013202467899988777567888765310000123035788--776644311000034547888886412342046776
Q gi|254780843|r 96 TIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAV--SRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSM 173 (420)
Q Consensus 96 a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~--~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~ 173 (420)
. .+|-.+.....+...-.+...|-..++..|..+++.|. ...+..-.-.+++.++||++...+..+..-......
T Consensus 84 n---r~Y~~l~~~gVLLss~~sta~Pq~faLarehad~~gr~~vMFss~~Raq~SLawvigpp~a~~La~~~~F~vmf~~ 160 (377)
T TIGR00899 84 N---RNYFVLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVLRAQISLAWVIGPPLAFALALGFGFTVMFLA 160 (377)
T ss_pred H---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 5---0068899999999978867516889999998665227612789999999999999999999998742028999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 55555778988864200112110013455554321012310123321000111122211111110001110001355677
Q gi|254780843|r 174 LADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYVGAEVAI 253 (420)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (420)
............+...+ ..++.. .......+.....+++..+..........+.....
T Consensus 161 aa~~f~~~~~l~~~~LP-----------------s~~~~~-----~~~~~~~~~~g~~~~r~~rLLfv~~~Lmw~~n~ly 218 (377)
T TIGR00899 161 AAVAFVLCGVLVWLLLP-----------------SVPRGA-----PGATTTLEVRGRLARRDTRLLFVACTLMWGCNILY 218 (377)
T ss_pred HHHHHHHHHHHHHHHCC-----------------CCCCCC-----CHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999998677-----------------310001-----00100001477432354279999999997504788
Q ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH-H
Q ss_conf 899998754201222101246888999987643100111111000000000124555545676899622336899999-9
Q gi|254780843|r 254 GSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYTTGFISGWSL-I 332 (420)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 332 (420)
....+.+..+ +++.+....|.......+.-+......++..+|+++++++.................+........ .
T Consensus 219 ~i~mpl~li~--EL~l~~kl~G~~~g~AAGlEiP~M~~Agy~~~R~Gkr~Lm~~A~~~g~~fy~~~~~~~~~~~~~~lq~ 296 (377)
T TIGR00899 219 IINMPLFLIN--ELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRLGKRRLMLLAVVAGVAFYTGLLLANSLWALLMLQL 296 (377)
T ss_pred HHHHHHHHHH--HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_conf 8522789998--62584189999999976556479999778888875899999999999999999985162899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH-HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999963015656-999999-9999-9999999999999996123799999999999999999985
Q gi|254780843|r 333 AVGLFNSIMFPTIFSLASASLEDQAS-GGSGII-CTTI-SGGVIIPLGVGYLVDIASLRDAMFVPAVCYIIIAIYGIYC 408 (420)
Q Consensus 333 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~-~g~~i~p~i~G~l~d~~g~~~~~~~~~~~~~~~~~~~~~~ 408 (420)
+-+.+.|...|...-+..|..|++.+ .+.... .... +|..+...+.|.+.|.++++..|++..++..+. .+.+..
T Consensus 297 lna~fiGi~~g~gmlYfqdLmP~~~gs~AttLy~n~~~G~G~i~ag~v~G~~~e~W~~~Avy~~~~~~~~~a-~~~l~~ 374 (377)
T TIGR00899 297 LNAIFIGILAGIGMLYFQDLMPGRAGSAATTLYTNTSRGVGWIIAGSVAGILAEIWSYHAVYWFAIVMLIVA-LLVLLR 374 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
T ss_conf 999999999988999998627314458999999875213899999988669888755799999999999999-999988
No 71
>KOG3764 consensus
Probab=99.93 E-value=6.8e-25 Score=141.08 Aligned_cols=331 Identities=16% Similarity=0.087 Sum_probs=209.2
Q ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 98099989999999999999999999999999852628999999997643210000001320246789998877756788
Q gi|254780843|r 39 NSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATIEITTFKVFLIALCILAIGVVI 118 (420)
Q Consensus 39 ~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~ 118 (420)
++.+-+++|+|++...+.+...+.+++.|.+.||+|+|-.+++|+.++...++++++. ++|+.+.+.|.++|+|.++
T Consensus 99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg---~sy~~l~vAR~LQgvgsA~ 175 (464)
T KOG3764 99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFG---NSYPMLFVARSLQGVGSAF 175 (464)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHH
T ss_conf 3755432002378999999999745442156777356427999999999999999870---5107899999986443888
Q ss_pred HHHHHHCCHHCCCCHHH-HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
Q ss_conf 87653100001230357-88776644311000034547888886412342046776555557789888642001121100
Q gi|254780843|r 119 IQVALNPFISLLGDPNT-AVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSMLADTMKDYQTDTARVISQMYLVLA 197 (420)
Q Consensus 119 ~~~~~~~~~~~~~~~~~-r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (420)
...+..+++++.+|+++ |++.++....+.+.|..+||..++.+.+..+....+.........-.......
T Consensus 176 ~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~v--------- 246 (464)
T KOG3764 176 ADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLV--------- 246 (464)
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHE---------
T ss_conf 87533899998715530444789999998750332158744005764487574899999999999999865---------
Q ss_pred HHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf 13455554321012310123321000111122211111110001110001355677899998754201222101246888
Q gi|254780843|r 198 IILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYVGAEVAIGSIMANYLMRHDTLHLDGISAGQH 277 (420)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (420)
. ++.+.+++...+..+..+..+.+..+...................++....+. ...+....+..
T Consensus 247 -----------i--~p~~~~~~~~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~--m~~p~w~~G~~ 311 (464)
T KOG3764 247 -----------I--EPTEMDPDSTEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLET--MFTPGWEVGLA 311 (464)
T ss_pred -----------E--CCCCCCCCCCCCCCCHHHHHHCCHHHHHHCCHHHCCCHHHHHCCCCHHHHHHH--CCCCCCCEEEE
T ss_conf -----------5--83346864466673289988472475553302211210887575108899976--16887501246
Q ss_pred HHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHH--HHHCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99998764310011111100000000012455554567689--96223368-9999999999999999999999996301
Q gi|254780843|r 278 TAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVIL--SSYTTGFI-SGWSLIAVGLFNSIMFPTIFSLASASLE 354 (420)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 354 (420)
.-........+..+.+.+.||+++.+.......+....... ....+... .++....++++.+.......+.....+.
T Consensus 312 fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd 391 (464)
T KOG3764 312 FLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVD 391 (464)
T ss_pred ECCCCCCHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 11025313106730799987667335899987799998884314755528988663578889888878877646677603
Q ss_pred -HH------HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf -56------56999999-99999999999999999996123799999999
Q gi|254780843|r 355 -DQ------ASGGSGII-CTTISGGVIIPLGVGYLVDIASLRDAMFVPAV 396 (420)
Q Consensus 355 -~~------~~~~~~~~-~~~~~g~~i~p~i~G~l~d~~g~~~~~~~~~~ 396 (420)
++ .+.+.++. .+..+|.+++|.+.|.+.+..|+.+...+..+
T Consensus 392 ~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~ 441 (464)
T KOG3764 392 PRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGI 441 (464)
T ss_pred HHHCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCHHEEEHHHHHHHHHHHH
T ss_conf 42226653111189999878787421156443011000127889999999
No 72
>TIGR00900 2A0121 H+ Antiporter protein; InterPro: IPR004751 Drug antiporters which use the proton motive force for the active efflux of the drug .; GO: 0016021 integral to membrane.
Probab=99.92 E-value=1.4e-22 Score=129.56 Aligned_cols=356 Identities=14% Similarity=0.041 Sum_probs=240.8
Q ss_pred HHHHHHHHHHHHHHHH--HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCC
Q ss_conf 9999998738998999--99980999899999999999999999999999998526289999999976432100000013
Q gi|254780843|r 21 FLFGGITSLNSILVPK--LQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATIE 98 (420)
Q Consensus 21 f~~g~~~~~~~~~~p~--l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~ 98 (420)
.+......+..+++|. .-.+.+-|..+.++...+.++++.+..|+.|.+.||++||++++..-++-++..........
T Consensus 9 ~~s~~G~ai~~vAl~llA~vl~~~g~~~~l~la~~~~~~p~~~~~piaG~~~DR~~Rk~~~~~~Dlirav~~~~l~~~~~ 88 (387)
T TIGR00900 9 LISLLGSAITQVALPLLAYVLAGTGSASVLSLAALAGLLPYVVLSPIAGVLVDRYDRKKVMIGADLIRAVLVAVLPFVAL 88 (387)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999850476668999999988764143033002311577116678888999999999999998
Q ss_pred CC-----HHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHH--HHHHHHHHHHHHCCCHH-HHHHHHHHHHHHCCCCCHH
Q ss_conf 20-----2467899988777567888765310000123035--78877664431100003-4547888886412342046
Q gi|254780843|r 99 IT-----TFKVFLIALCILAIGVVIIQVALNPFISLLGDPN--TAVSRLTFAQFFNSLGT-AIFPYIGSVLMLGNLASPN 170 (420)
Q Consensus 99 ~~-----~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~-~~g~~~~~~l~~~~~~~~~ 170 (420)
.. +.|..++..++.++...+..|+..+++.+..|+| +-.++.+..+....+.. .+||.+++.+.......+.
T Consensus 89 ~~Gvd~l~~~~~~v~~~i~~~~~~Ff~pa~~a~~P~~vp~e~W~l~~Ans~~~~~~~~~~r~vgPgigg~~~~~~g~~~~ 168 (387)
T TIGR00900 89 LGGVDVLEIWMVYVVAFILAIAQAFFTPAYQAMLPDLVPEEKWQLTRANSLSQLVRSLFYRIVGPGIGGLLYATLGIKWA 168 (387)
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 46501234999999999999776421302220020002112347999987999999998875679999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH-HHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 7765555577898886420011211001345555-432101231012332100011112221111111000111000135
Q gi|254780843|r 171 TSMLADTMKDYQTDTARVISQMYLVLAIILFLAT-WLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYVGA 249 (420)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (420)
......... .......... .+.... ......+++...++-.++..+-.+-..++|..+............
T Consensus 169 ~~~~a~~F~---~s~~l~~~~r------~p~~~~~~~~~~~~rkts~~~~~rd~~eG~~~~~~~~~L~~l~~~~~~~~~~ 239 (387)
T TIGR00900 169 ILVDAVGFL---ISALLIVSVR------IPEKAASEIEPLSERKTSLKAVLRDILEGLKFVLKNKVLRTLLLLALLFNLV 239 (387)
T ss_pred HHHHHHHHH---HHHHHHHHCC------CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf 999999999---9999986505------7666788888875256589999999999999997076899999999999998
Q ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC-----CCCCHHHCCCHHHHHHHHHHHHHHHHHHCCH
Q ss_conf 56778999987542012221012468889999876431001111-----1100000000012455554567689962233
Q gi|254780843|r 250 EVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGT-----WILSRFSAEKTLCAFATTACSLVILSSYTTG 324 (420)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (420)
..........|... +..+.+....+.....+..+...+....+ ...++..+..+.........+......+.++
T Consensus 240 ~~p~~~~l~P~~~~-~~~~~~~~~~G~~~~af~~G~l~G~L~~~~~L~~~~~~~~~r~~l~~~a~~~~g~~~~~~~~~~~ 318 (387)
T TIGR00900 240 FAPIIVVLFPYVTS-KYLNRTSVHVGWVLAAFGLGALLGALLLGSILRRLLGRYFKRIALITGAVLVIGLAILVVGLLPP 318 (387)
T ss_pred HHHHHHHHHHHHEE-EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 51278876303214-44078622567999999999999999999999887611343489999999999999898762389
Q ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Q ss_conf -----6899999999999999999999999963015-65699999999-99999999999999999612
Q gi|254780843|r 325 -----FISGWSLIAVGLFNSIMFPTIFSLASASLED-QASGGSGIICT-TISGGVIIPLGVGYLVDIAS 386 (420)
Q Consensus 325 -----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~g~~i~p~i~G~l~d~~g 386 (420)
+......+.+|++.+.......+...+..|+ ..+++.+...+ .....-++=++.|.+.|+.|
T Consensus 319 ~~~~~~~~l~~~~~~G~~~~~~~~~~~~~~q~~v~~~~~GRV~~~~~~~~~~a~Plgl~l~G~L~~~~G 387 (387)
T TIGR00900 319 RNSGFLLLLVLAFAIGVGVGLINVPIGTLLQRSVPAELLGRVFGLQFSLSSAAGPLGLILAGPLADKLG 387 (387)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 614899999999986420345587788788875007851589999999999999988999998886309
No 73
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.92 E-value=1.1e-20 Score=119.96 Aligned_cols=394 Identities=13% Similarity=0.042 Sum_probs=220.3
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
Q ss_conf 97531120059999999999999999873899-8999999809998--99999999999999999999999998526289
Q gi|254780843|r 1 MKDTIARNIQCTKIYIFILFFLFGGITSLNSI-LVPKLQNSFSLTY--LQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIK 77 (420)
Q Consensus 1 m~~~~~k~~~~~~i~i~~~ff~~g~~~~~~~~-~~p~l~~~~~~s~--~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~ 77 (420)
||+-++++. ++-.+..-|+-.|.++..-. ++..+...++-++ .-..++..+|.+.+.+++.++|.++|||.+++
T Consensus 3 ~~~ll~~r~---F~p~f~tqflgAfnDn~~K~~l~~~~~~~~~~~~~~~l~~l~~~lFiLPF~Lfsa~aG~lADr~~K~~ 79 (1150)
T PRK08633 3 MKNLLKIGG---FIPFLLIQFLNAFNDLGHKIIIQNTLIKAYDGSEAGILTAIVNALILLPFLLFSSPAGFLADKFPKNR 79 (1150)
T ss_pred HHHHHHHCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf 566657437---59999999980999999999999999998185135799999999999999998642777423074889
Q ss_pred HHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHH
Q ss_conf 99999997643210000001320246789998877756788876531000012303578877664431100003454788
Q gi|254780843|r 78 GICTGLLIMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYI 157 (420)
Q Consensus 78 ~l~~~~~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 157 (420)
++...-..-.+..++...+-...+++.++...++.|...+...|+-+.++.|..++++-....++..+...++...|..+
T Consensus 80 vir~~k~~Ei~im~l~~~~~~~~~~~~l~~~lflmg~qSa~fgPaKYgiLpe~l~~~eL~~aNglve~~Tf~AIL~Gti~ 159 (1150)
T PRK08633 80 VIVIVALFEVGLTLLIVAGYYLGWFWLAFAATFLLGAQSAIYSPAKYGIIKELVGKENLSRANGLIEAVTIVAILAGTAL 159 (1150)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999972299999999999999987617999888876792205276609999999999999999
Q ss_pred HHHHHHCCCCCHH-------HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCC
Q ss_conf 8886412342046-------776555557789888642001121100134555543210123101233210001111222
Q gi|254780843|r 158 GSVLMLGNLASPN-------TSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDI 230 (420)
Q Consensus 158 ~~~l~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (420)
++.+.+....... .+.............+............. ...+. ..+..+.-+...........
T Consensus 160 gg~l~~~~~~~~~~~~~~~~~~~~~~~l~~~Av~g~~~s~~IP~~~~~~-----p~~~~-~~n~~~~~~~~~~~~~l~~~ 233 (1150)
T PRK08633 160 FSFLFESLYGYNQTSEILQRIAPLGIVLLAVALIELFFAFRLPKVPATA-----ANRPL-VFNPKDYLRGSLLIENLKLL 233 (1150)
T ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-----CCCCC-CCCHHHHHHHHHHHHHHHHH
T ss_conf 9999986435555310255789999999999999999982098998888-----88833-57826877467799999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH-HHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHH
Q ss_conf 111111100011100013556778999987542012221012-4688899998764310011111100000000012455
Q gi|254780843|r 231 LANPRFTMGAVCIFLYVGAEVAIGSIMANYLMRHDTLHLDGI-SAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFA 309 (420)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
.+++..+...+....+..........++.+..... +.+.. ....+.....++...+.....+++++.-.....-.++
T Consensus 234 ~~~~~l~~silgiSwFW~~ga~~l~~~p~~~k~~L--g~~~~~~~~~Lla~~~iGI~~GS~la~~ls~~~ie~glvP~Ga 311 (1150)
T PRK08633 234 RHDRNLWLAIIGLSYFWFVSQLLLANFPAYGKEEL--GLDNTFQVQYLLAASAIGIGIGSLLAGRLSKRYIELGIVPLGA 311 (1150)
T ss_pred HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHH
T ss_conf 85938899999999999999999998899999983--8980899999999999999999999999967966425458899
Q ss_pred HHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 55456768-996223368999999999999999999999999630156-5-69999999999999999999999999612
Q gi|254780843|r 310 TTACSLVI-LSSYTTGFISGWSLIAVGLFNSIMFPTIFSLASASLEDQ-A-SGGSGIICTTISGGVIIPLGVGYLVDIAS 386 (420)
Q Consensus 310 ~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~g~~i~p~i~G~l~d~~g 386 (420)
....+..+ +....+.+.....+.++|++.+......++......++. . +..++-+....++...+ .+...+....|
T Consensus 312 ~g~~l~~~~l~~~~~~~~~~~~l~~~G~~gGlfiVPL~A~iQ~~a~~~~r~rviAanNi~n~~~mv~~-~~~~~~l~~~~ 390 (1150)
T PRK08633 312 FGMTLMLFLLPAASSLPSVLLLFFLFGFSGGLFIVPLNALIQFRAPEKELGEVLAANNFLQNVGMLLF-LGLTWLFSYLG 390 (1150)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCC
T ss_conf 99999999999876589999999999998677567789998741886552342289899999999999-99999999818
Q ss_pred H--HHHHHHHHHHHHHHHHHHH
Q ss_conf 3--7999999999999999999
Q gi|254780843|r 387 L--RDAMFVPAVCYIIIAIYGI 406 (420)
Q Consensus 387 ~--~~~~~~~~~~~~~~~~~~~ 406 (420)
. ..-|+++++..+++++|.+
T Consensus 391 ~s~~~~f~~la~~~~~~~~~~~ 412 (1150)
T PRK08633 391 ISPAGLFYFIALVTLIGTLYTL 412 (1150)
T ss_pred CCHHHHHHHHHHHHHHHHHHHH
T ss_conf 8999999999999999999999
No 74
>KOG4686 consensus
Probab=99.91 E-value=9.1e-25 Score=140.46 Aligned_cols=389 Identities=15% Similarity=0.088 Sum_probs=245.4
Q ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHCCHHCCCCCHHH
Q ss_conf 998738998999999809998999999999999999999999999985-2628999999997643210000001320246
Q gi|254780843|r 25 GITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQR-YGYIKGICTGLLIMSLGCILFTATIEITTFK 103 (420)
Q Consensus 25 ~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr-~Grr~~l~~~~~~~~i~~ll~~~a~~~~~~~ 103 (420)
|.+.--+.+..+.+.|.+++.++..++.|.|.+...+...+.|++.|| +|.|..-++-.....+|.+.+......+.||
T Consensus 58 fcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw 137 (459)
T KOG4686 58 FCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFW 137 (459)
T ss_pred EECCCCHHHHHHHHCCCCCCEEEEEEEEEECCCCCEEEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_conf 22478046655530466534133245443221787777654112110123034778999999999789998220898999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf 78999887775678887653100001230357887766443110000345478888864123420467765555577898
Q gi|254780843|r 104 VFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSMLADTMKDYQT 183 (420)
Q Consensus 104 ~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 183 (420)
.+...|++.|+|.-....+.+.+...|++.++....+++..+....|++.-..+.+++.+....... .........+..
T Consensus 138 ~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~-~~ghT~LG~~l~ 216 (459)
T KOG4686 138 TMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFP-GVGHTLLGLWLC 216 (459)
T ss_pred HHHHHHEEECCCCHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHCEEEEEECHHHHHHHHHHCC-CCHHHHHHHHHH
T ss_conf 9985131432373233645232348786274304015678889876062001340889999997654-202889999999
Q ss_pred HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88642001121100134555543210123101233210001111222111111100011100013556778999987542
Q gi|254780843|r 184 DTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYVGAEVAIGSIMANYLMR 263 (420)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (420)
....... .....+...... +.+.++.-+.++....+..+-.......+..|.......++.....-....-+.+ .
T Consensus 217 ~~~~tc~-~slical~lg~~--D~rAerilh~e~g~~Ge~pkLtdv~~f~ppfw~~~iicv~yyva~fPFi~lg~~f--F 291 (459)
T KOG4686 217 FEVKTCK-QSLICALSLGLS--DDRAERILHLEEGFLGEEPKLTDVNTFYPPFWVLVIICVLYYVAWFPFITLGPMF--F 291 (459)
T ss_pred HHHHHHH-HHHHHHHHHHHH--HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH--H
T ss_conf 9999999-999999985326--6678888765317666876113565567639999999999999987776423777--7
Q ss_pred HCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 01222101246888999987643100111111000000000124555545676899622336899999999999999999
Q gi|254780843|r 264 HDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYTTGFISGWSLIAVGLFNSIMFP 343 (420)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 343 (420)
++..|.+...++.+.+.............+.+.|+.++......+.++..+..-....-.....+..+.++|+..+..-.
T Consensus 292 ~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft~lsPy~~m~~lGLsysllAc 371 (459)
T KOG4686 292 QKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFTFLSPYTSMTFLGLSYSLLAC 371 (459)
T ss_pred HHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 87618875422445664553433524567776765266421578999999987666775341579889998500888998
Q ss_pred HHHHHHHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHHHHHHHH-HH--HHHHHHHHHHHHHHHHHHHHHHHH--HCCC
Q ss_conf 99999996301565-699999-99999999999999999999612-37--999999999999999999853111--0201
Q gi|254780843|r 344 TIFSLASASLEDQA-SGGSGI-ICTTISGGVIIPLGVGYLVDIAS-LR--DAMFVPAVCYIIIAIYGIYCCYKE--NNFE 416 (420)
Q Consensus 344 ~~~~~~~~~~~~~~-~~~~~~-~~~~~~g~~i~p~i~G~l~d~~g-~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 416 (420)
..++.....+|+++ +++-+. ....++|-++.|.+.|.+.|..| +. .+|.+....+.....--+|...|+ -|.|
T Consensus 372 slWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~N~kq~gnLN 451 (459)
T KOG4686 372 SLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYLNKKQSGNLN 451 (459)
T ss_pred HHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC
T ss_conf 87433466377877040688999998511558755441266688860469999999999999998888520032368878
Q ss_pred CCC
Q ss_conf 279
Q gi|254780843|r 417 QNT 419 (420)
Q Consensus 417 ~~~ 419 (420)
++.
T Consensus 452 ~~a 454 (459)
T KOG4686 452 RKA 454 (459)
T ss_pred CCC
T ss_conf 886
No 75
>KOG0252 consensus
Probab=99.91 E-value=5.8e-23 Score=131.41 Aligned_cols=391 Identities=12% Similarity=0.029 Sum_probs=216.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-C-------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
Q ss_conf 999999999999873899899999980-9-------99899999999999999999999999998526289999999976
Q gi|254780843|r 15 YIFILFFLFGGITSLNSILVPKLQNSF-S-------LTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIM 86 (420)
Q Consensus 15 ~i~~~ff~~g~~~~~~~~~~p~l~~~~-~-------~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~ 86 (420)
.-..-||.-+++..+++...|.+...+ + ......+.+..+-.+|..++|+..|++.||+|||+++...++++
T Consensus 45 iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liIm 124 (538)
T KOG0252 45 IAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIM 124 (538)
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf 74011201405543487789999987337777778678058889899899889999999988886623124666789999
Q ss_pred HHHHHCCHHCCCCC----HHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 43210000001320----24678999887775678887653100001230357887766443110000345478888864
Q gi|254780843|r 87 SLGCILFTATIEIT----TFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLM 162 (420)
Q Consensus 87 ~i~~ll~~~a~~~~----~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 162 (420)
.++++++++....+ -.+.+...|++.|+|.|.-+|...+..+|....++|+..++...+..+.|...|..+...+.
T Consensus 125 Ii~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~ 204 (538)
T KOG0252 125 IICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVS 204 (538)
T ss_pred HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHCCHHHHHHH
T ss_conf 99999864777768973024688898888611426778642877645642101230257888752605765029999999
Q ss_pred HCC---CCC----HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC-------CCCCCHHHHHHHCCCCCCC
Q ss_conf 123---420----46776555557789888642001121100134555543210-------1231012332100011112
Q gi|254780843|r 163 LGN---LAS----PNTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWM-------QRNSFADHKRNHISFLKTL 228 (420)
Q Consensus 163 ~~~---~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~ 228 (420)
... ... ......|.............+..................+. .++.....-+.+.......
T Consensus 205 ~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~~~~~ 284 (538)
T KOG0252 205 AIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAESTAESDV 284 (538)
T ss_pred HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHCCCCCC
T ss_conf 99716378888736778999999999878899888766307760467877505876655400545654200010245678
Q ss_pred CCCCCCCC--------C------CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH---------HHHHHHHHH
Q ss_conf 22111111--------1------000111000135567789999875420122210124688---------899998764
Q gi|254780843|r 229 DILANPRF--------T------MGAVCIFLYVGAEVAIGSIMANYLMRHDTLHLDGISAGQ---------HTAIYWGSA 285 (420)
Q Consensus 229 ~~~~~~~~--------~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 285 (420)
...++... | ......+......+....+..... ...+........ -........
T Consensus 285 ~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~---~~ig~~~~~~~~~~~~~vA~~~~iia~~~~ 361 (538)
T KOG0252 285 PPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIF---SAIGVIPSANTYHELFKVAEGNLIIAVCST 361 (538)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH---HHHCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 98621112589999999888999988888741015520440789998---861617774028999999999889998736
Q ss_pred HHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCHH-HHHH---HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH
Q ss_conf 3100111111000000000124555545676899622336-8999---9999999999999--99999999630156569
Q gi|254780843|r 286 MIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYTTGF-ISGW---SLIAVGLFNSIMF--PTIFSLASASLEDQASG 359 (420)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~ 359 (420)
+.+.+......|+.+++...+....+..+..+........ .... .+..+..+.+-.. .+.+....|.+|.+.+.
T Consensus 362 vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~ 441 (538)
T KOG0252 362 VPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRS 441 (538)
T ss_pred CCCEEEEEEEEEHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCEEEEEEHHHCHHHHHH
T ss_conf 87614888875111326887760999999999974874445564765535889999986599962698345535387766
Q ss_pred HHHHH--HHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999--9999999999999999999-----6123799999999999999999985
Q gi|254780843|r 360 GSGII--CTTISGGVIIPLGVGYLVD-----IASLRDAMFVPAVCYIIIAIYGIYC 408 (420)
Q Consensus 360 ~~~~~--~~~~~g~~i~p~i~G~l~d-----~~g~~~~~~~~~~~~~~~~~~~~~~ 408 (420)
..-.. ..+-.|+.++....+++.| ..|.+..+++...|+.+-.++-+..
T Consensus 442 t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~ 497 (538)
T KOG0252 442 TCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLI 497 (538)
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEEEE
T ss_conf 54558888663028899987667662467765562178999999899867712672
No 76
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.90 E-value=3.6e-19 Score=112.39 Aligned_cols=151 Identities=12% Similarity=0.104 Sum_probs=125.1
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHH
Q ss_conf 87389989999998099989999999999999999999999999852-62899999999764321000000132024678
Q gi|254780843|r 27 TSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRY-GYIKGICTGLLIMSLGCILFTATIEITTFKVF 105 (420)
Q Consensus 27 ~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~-Grr~~l~~~~~~~~i~~ll~~~a~~~~~~~~~ 105 (420)
+++-+.+.-.+.+++|+|++++..+.+.|..-.-+..++.|+++||+ |+||.+++|.++.++|.++.++.... ...+
T Consensus 38 YGmralL~lyl~~~Lg~s~~~A~~i~g~f~alvYl~pi~GG~lADr~LG~r~ti~~G~il~~~G~~~La~~~~~--~~~~ 115 (500)
T PRK09584 38 YGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHD--AGIV 115 (500)
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC--HHHH
T ss_conf 99999999999988499888999999999999999998699998961040999999999999989999723563--7899
Q ss_pred HHHHHHHHHHHHHHHHHHHCCHHCCCC--HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 999887775678887653100001230--35788776644311000034547888886412342046776555557
Q gi|254780843|r 106 LIALCILAIGVVIIQVALNPFISLLGD--PNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSMLADTMK 179 (420)
Q Consensus 106 ~~~~~i~g~g~~~~~~~~~~~~~~~~~--~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~ 179 (420)
.....+..+|.|..-+...+.+.+.++ +++|....++.+.+.++|..++|.+.+.+.+..+++..+........
T Consensus 116 ~~gL~lI~vG~G~~KpnisslvG~lY~~~d~rrD~~FtiFYmgINiGafla~ll~g~l~~~~G~~~gF~~a~igM~ 191 (500)
T PRK09584 116 YMGMAAIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGML 191 (500)
T ss_pred HHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_conf 9999999955534676577888760589963322442289999989999999999999987361678998999999
No 77
>TIGR00897 2A0118 polyol permease; InterPro: IPR004748 Proteins in this entry are mostly known or predicted polyol transporters. The best characterised of these proteins are DalT and RbtT from Klebsiella pneumoniae, which tranpsort D-arabinatol and ribotol respectively. Like other members of the Major Facilitator Superfamily (MFS), DalT and RbtT appear to be secondary transporters capable only of transporting solutes in response to chemiosmotic ion gradients . They contain a total of twelve predicted transmembrane helices; six in the N-terminal portion of the protein, and six in the C-terminal portion. Residues defining substrate specificity lie in the N-terminal region of these proteins.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=99.90 E-value=3.1e-20 Score=117.75 Aligned_cols=375 Identities=14% Similarity=0.148 Sum_probs=252.6
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
Q ss_conf 59999999999999999873-89989999998099989999999999999999999999999852628999999997643
Q gi|254780843|r 10 QCTKIYIFILFFLFGGITSL-NSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSL 88 (420)
Q Consensus 10 ~~~~i~i~~~ff~~g~~~~~-~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i 88 (420)
+..+=.+.+..||.| ++. .+=+.|.+ .|.|+|..|.+.+.|+|-++.++.+=++|...|-+|+||+|.+|++.+.+
T Consensus 19 ~l~WGyigvv~FM~G--DGlE~gwLSpfl-~~~Gls~~~sas~Ft~YGiA~aisaW~SGv~~e~~gp~kTM~~Gll~~~~ 95 (411)
T TIGR00897 19 RLLWGYIGVVVFMVG--DGLEQGWLSPFL-VELGLSVQQSASLFTLYGIAVAISAWLSGVVVEIIGPKKTMMIGLLLYVV 95 (411)
T ss_pred HHHHHHHHHHHHHCC--CCHHHHHHHHHH-HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf 676677764220125--635475532899-96188887899999999999999988888999864221678999999999
Q ss_pred HHHCCH-HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHH-HHHHHHHHHHHHCCC
Q ss_conf 210000-001320246789998877756788876531000012303578877664431100003-454788888641234
Q gi|254780843|r 89 GCILFT-ATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGT-AIFPYIGSVLMLGNL 166 (420)
Q Consensus 89 ~~ll~~-~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~-~~g~~~~~~l~~~~~ 166 (420)
++.++. ++-..-+|+.++...++-|.|.....-+-...+....++++.+++.+........|. +.|+...++-+...+
T Consensus 96 g~aaFivfg~~h~nyp~~l~~Y~~rGlgYPLFaYSFlvwv~y~~~~~~ls~AvGWFW~~y~~G~~VfG~~ysSyaipafG 175 (411)
T TIGR00897 96 GSAAFIVFGLEHLNYPLLLLFYAIRGLGYPLFAYSFLVWVVYNTKQDKLSSAVGWFWIVYSIGLGVFGSYYSSYAIPAFG 175 (411)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEECCHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
T ss_conf 99999998688888999999888884021788887672220212411003317899999997465430122012555303
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 20467765555577898886420011211001345555432101231012332100011112221111111000111000
Q gi|254780843|r 167 ASPNTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLY 246 (420)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (420)
.-...+............ .....++...+.++++..++++.++-.+...-...||+.......-...
T Consensus 176 e~nTLWsal~fv~~Gg~~-------------AL~~~kd~ftp~~~qnlt~~ek~~EL~ka~TilftNp~vl~gg~vriIN 242 (411)
T TIGR00897 176 ELNTLWSALLFVLTGGVL-------------ALFINKDKFTPKKKQNLTTREKFEELGKAVTILFTNPKVLLGGVVRIIN 242 (411)
T ss_pred CHHHHHHHHHHHHHHHHH-------------HHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHEECCCCCHHHHHHHHH
T ss_conf 234689999999998999-------------9998752058066524666700677740000201078400002788776
Q ss_pred HHHHHHHHHHHH-HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHH-HHCCH
Q ss_conf 135567789999-8754201222101246888999987643100111111000000000124555545676899-62233
Q gi|254780843|r 247 VGAEVAIGSIMA-NYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILS-SYTTG 324 (420)
Q Consensus 247 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 324 (420)
.....+...++| .|. + .+|.|....-..-.......+....+.+.+.||++-++++.-..+..+....+. -..+.
T Consensus 243 ~ig~fGFavflPmm~~-a--~~G~StseWLQiWg~~Ff~nIvfN~ifGivGdKlGW~~~V~WFGgvG~giftlalYY~P~ 319 (411)
T TIGR00897 243 TIGLFGFAVFLPMMFL-A--ELGFSTSEWLQIWGTLFFTNIVFNVIFGIVGDKLGWKNTVIWFGGVGCGIFTLALYYIPQ 319 (411)
T ss_pred HHHHCCHHHHHHHHHH-H--HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHH
T ss_conf 1322134676358999-7--638740258999999999999999999754144687316676376458999999986566
Q ss_pred HH--HHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 68--99999----99999999999999999996301565699-9999999999999999999999961237999999999
Q gi|254780843|r 325 FI--SGWSL----IAVGLFNSIMFPTIFSLASASLEDQASGG-SGIICTTISGGVIIPLGVGYLVDIASLRDAMFVPAVC 397 (420)
Q Consensus 325 ~~--~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~i~p~i~G~l~d~~g~~~~~~~~~~~ 397 (420)
.. ..... ...|...+...| +-+......||+.+++ |.++....+...++|.++-.+....|-...-++-++.
T Consensus 320 ~~Ghs~av~~iia~~~G~~lAgyVP-l~A~~Ptlapk~KGAA~SVlNL~aGlsaF~aPaia~lfig~~ga~GVv~ifaAL 398 (411)
T TIGR00897 320 FIGHSFAVVLIIAIIYGILLAGYVP-LAAVLPTLAPKDKGAAMSVLNLSAGLSAFVAPAIAVLFIGLLGAIGVVWIFAAL 398 (411)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 5225899999999999999986634-887422348998731564888886288788899999998500202799999999
Q ss_pred HHHHHHH
Q ss_conf 9999999
Q gi|254780843|r 398 YIIIAIY 404 (420)
Q Consensus 398 ~~~~~~~ 404 (420)
+++.++.
T Consensus 399 Y~~safL 405 (411)
T TIGR00897 399 YLVSAFL 405 (411)
T ss_pred HHHHHHH
T ss_conf 9999999
No 78
>TIGR02332 HpaX 4-hydroxyphenylacetate permease; InterPro: IPR012707 Among the different families of transporter only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients , . This entry represents a group of MFS proteins encoded in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterised as 4-HPA permease in Escherichia coli, where 3-HPA and 3,4-dihydroxyphenylacetate, but not other substrate analogues, were shown to competitively inhibit 4-HPA transport, indicating a narrow substrate specificity ..
Probab=99.89 E-value=9.4e-21 Score=120.33 Aligned_cols=387 Identities=13% Similarity=0.097 Sum_probs=252.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
Q ss_conf 1120059999999999999999873-899899999980999899999999999999999999999998526289999999
Q gi|254780843|r 5 IARNIQCTKIYIFILFFLFGGITSL-NSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGL 83 (420)
Q Consensus 5 ~~k~~~~~~i~i~~~ff~~g~~~~~-~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~ 83 (420)
++|-.+...++++++ |++.|.+.+ +|-.--.+-+|+|++.+..|+..+.|+..|.+..+|+.....+.|.||-+..-+
T Consensus 2 i~klfrrli~flf~l-f~fsfldriniGfaGltmG~dlGl~~tmfGla~tlfy~~yv~~GiPsn~ml~~~GarrWia~im 80 (412)
T TIGR02332 2 IKKLFRRLIVFLFVL-FVFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYVAYVIFGIPSNIMLAKVGARRWIATIM 80 (412)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 257999999999999-9999886664201112210010036889999999999999986262789998863578988999
Q ss_pred HHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 97643210000001320246789998877756788876531000012303578877664431100003454788888641
Q gi|254780843|r 84 LIMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLML 163 (420)
Q Consensus 84 ~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 163 (420)
+++++.+....++...+ .+++.|.+.|+.++...|....+...|+|..+|.++..+......+...+|..+.+++..
T Consensus 81 v~WGiast~tmfat~P~---~ly~lr~lvGi~eaGflPGil~ylt~WfPay~raranalfm~amPvt~~lG~i~sGyil~ 157 (412)
T TIGR02332 81 VLWGIASTATMFATSPE---SLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMVAMPVTTALGLILSGYILA 157 (412)
T ss_pred HHHHHHHHHHHHCCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98756766554305741---788899998764200225799999986346777677788788878999988898779999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHH-HHCCCCCCCHHHHH--HHHHHHH-----------CCCCCCHHHHHHHCCCCCCCC
Q ss_conf 234204677655555778988864-20011211001345--5554321-----------012310123321000111122
Q gi|254780843|r 164 GNLASPNTSMLADTMKDYQTDTAR-VISQMYLVLAIILF--LATWLCW-----------MQRNSFADHKRNHISFLKTLD 229 (420)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~ 229 (420)
..+-+..-.+-+............ ...+.+....+... ..+.+++ ....++..-.+.....++..+
T Consensus 158 ldG~~~lkGWqWlflleG~Psv~lGv~~Wf~l~d~Pd~a~Wl~~~~k~~l~~m~~~~~l~l~~p~ga~~h~~~~~rs~~r 237 (412)
T TIGR02332 158 LDGLMALKGWQWLFLLEGLPSVLLGVVVWFYLDDSPDKAKWLDKEEKKALKEMIDRERLTLVSPEGAIAHAAVQQRSTLR 237 (412)
T ss_pred HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 87787620146777772216899898887640488503354105678999999742022121430245565566556788
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHH
Q ss_conf 21111111000111000135567789999875420122210124688899998764310011111100000000012455
Q gi|254780843|r 230 ILANPRFTMGAVCIFLYVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFA 309 (420)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
....|.........+|..-.......|.|...+.. ..|.+....+........+.+.+.....+.+||...++--...-
T Consensus 238 e~~tP~~m~ytlayfCltntlsai~iWtPqilqsf-n~Gssni~iGllaa~Pq~Cti~Gm~~Wsr~sdr~~er~~ht~lP 316 (412)
T TIGR02332 238 EVLTPVVMLYTLAYFCLTNTLSAISIWTPQILQSF-NTGSSNITIGLLAAVPQICTILGMVYWSRRSDRLKERKKHTILP 316 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf 98778999999999998766766643124788874-04632678889976778999987787410034566544310136
Q ss_pred HH-HHHHHHHHHHCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 55-4567689962233689999-999999999999999999996301--5656999999999999999999999999961
Q gi|254780843|r 310 TT-ACSLVILSSYTTGFISGWS-LIAVGLFNSIMFPTIFSLASASLE--DQASGGSGIICTTISGGVIIPLGVGYLVDIA 385 (420)
Q Consensus 310 ~~-~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~i~p~i~G~l~d~~ 385 (420)
.+ .....++...+........ ......+.-......++..-+... .++-..+.++..+.+|.++.|.+.|.+.|.+
T Consensus 317 ylfaaaGWllasatdh~~iq~~~iimas~Gsf~am~ifWttPdq~isl~~ra~~~avina~Gn~Gsa~sP~~iG~lkd~t 396 (412)
T TIGR02332 317 YLFAAAGWLLASATDHSLIQLLSIIMASTGSFSAMAIFWTTPDQVISLRARAVAIAVINAVGNVGSALSPLLIGILKDLT 396 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHEECCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
T ss_conf 89988888887530046999999998620024443210207762121124454544434103212467799999987402
Q ss_pred HH-HHHHHHHHH
Q ss_conf 23-799999999
Q gi|254780843|r 386 SL-RDAMFVPAV 396 (420)
Q Consensus 386 g~-~~~~~~~~~ 396 (420)
|. +.+.+..+.
T Consensus 397 Gsf~sGlWfva~ 408 (412)
T TIGR02332 397 GSFSSGLWFVAA 408 (412)
T ss_pred CCCCHHHHHHHH
T ss_conf 440024999999
No 79
>pfam11700 ATG22 Vacuole effluxer Atg22 like. Autophagy is a major survival survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxes, which mediate the efflux of leucine and other amino acids resulting from autophagy. This family also includes other transporter proteins.
Probab=99.88 E-value=1.1e-18 Score=109.94 Aligned_cols=366 Identities=14% Similarity=0.042 Sum_probs=197.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH-HHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999999999852628999-999997643210000001320246789998877756788876531
Q gi|254780843|r 46 LQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGI-CTGLLIMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALN 124 (420)
Q Consensus 46 ~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l-~~~~~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~ 124 (420)
+-.++..++..+-.++.+|..|.++|+-|+||-+ .....+..+++..+.+. ..++++...+...+.-++........+
T Consensus 69 s~~~~~~sis~l~~Al~~P~lGa~AD~~~~rK~~L~~~~~l~~~~t~~l~~~-~p~~~~l~~~L~iia~i~~~~s~vfyn 147 (477)
T pfam11700 69 SFVLYTFSISVLIQAVLFISLGGIADYGNYRKNLLIAFALLGGLSTILFLGV-TPDQYLLGSVLYIIGNICFGASLVFYN 147 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999989997246751099999999999999999970-843699999999999999999999999
Q ss_pred CCHHCCCCHH--------------------------HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf 0000123035--------------------------78877664431100003454788888641234204677655555
Q gi|254780843|r 125 PFISLLGDPN--------------------------TAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSMLADTM 178 (420)
Q Consensus 125 ~~~~~~~~~~--------------------------~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~ 178 (420)
++..+..+++ ++++..+.-.+....|..+...+.-.+...............-.
T Consensus 148 a~LP~la~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~vS~~g~a~Gy~Gg~v~l~i~l~~~~~~~~~~~~~~~~~r~ 227 (477)
T pfam11700 148 SYLPLLARDDPELRASEEESADGTLSREEYDKLDSLTRTRVSSLGFALGYIGAILVLIISILILFGLGSPDQEGTLSLRL 227 (477)
T ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
T ss_conf 88676325220000011122334333201100014450442105788987899999999999997367677421255889
Q ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHHHHH-CCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 778988864200112110013455554321-0123101233210001111222111111100011100013556778999
Q gi|254780843|r 179 KDYQTDTARVISQMYLVLAIILFLATWLCW-MQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYVGAEVAIGSIM 257 (420)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (420)
.......|..+..... ..........+ .++..+......++.....++..+.+.........+++.-.........
T Consensus 228 ~~~~~a~w~~vFslP~---f~~~~~~~~~~~~~~~~~~~~~g~~~l~~t~k~i~~~~~~~~FL~a~~~y~Dgl~ti~~~~ 304 (477)
T pfam11700 228 VILIAGLWWLLFSIPW---FLWLKDRPGPKGLPSGLNYLTAGWKQLGRTFKQARKLKDALLFLVAWFLLSDGIATVNSLA 304 (477)
T ss_pred HHHHHHHHHHHHHHHH---HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999---9857788876777750679999999999999999867789999999999982798999999
Q ss_pred HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCC--CHHHHHHHHHHHHHHHHH---------HCCHHH
Q ss_conf 987542012221012468889999876431001111110000000--001245555456768996---------223368
Q gi|254780843|r 258 ANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAE--KTLCAFATTACSLVILSS---------YTTGFI 326 (420)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~---------~~~~~~ 326 (420)
..|... ..+.+..+..............+....+++.||++.+ +.............+... ..+.+.
T Consensus 305 ~iy~~~--vlg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~~~~~l~~~~~i~l~g~~g~~~~~~~~~~~~~ 382 (477)
T pfam11700 305 ILFAKT--VLGMSTAALIVLSITAQLAAVLGAFLWPFLSRRFGLKTKQTLIAIIVLWELIPLYGLLGIIPNVIGFKNPWE 382 (477)
T ss_pred HHHHHH--HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_conf 999998--709888899999999999999999999999989498138999999999999999999998862114345399
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH-HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999999996301565-699-99999999999999999999999612-37999999999999999
Q gi|254780843|r 327 SGWSLIAVGLFNSIMFPTIFSLASASLEDQA-SGG-SGIICTTISGGVIIPLGVGYLVDIAS-LRDAMFVPAVCYIIIAI 403 (420)
Q Consensus 327 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~g~~i~p~i~G~l~d~~g-~~~~~~~~~~~~~~~~~ 403 (420)
.++...+.|++.+...+..-++..+..|+.. +.. +.+...+...+.++|.+.|.+.|.+| .+.++....+.+++. +
T Consensus 383 f~~~~~~~G~~~G~~qs~sRsl~~~liP~~~~~efFGly~~~gk~ss~lGP~l~g~i~~~tg~~r~g~~~l~vlf~~g-~ 461 (477)
T pfam11700 383 FYVLAALYGLVLGGLSSYSRSMYSELIPRGKEALFFSLFAITDKGSSWIGPLIVGAITDRTGNIRNAFLFLAVLFVLG-L 461 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-H
T ss_conf 999999999986146998999999858998531486699986659999999999999998178223899999999999-9
Q ss_pred HHHHHHHHHHCCCCC
Q ss_conf 999853111020127
Q gi|254780843|r 404 YGIYCCYKENNFEQN 418 (420)
Q Consensus 404 ~~~~~~~~~~~~~~~ 418 (420)
..++....+|-.++.
T Consensus 462 ~ll~~V~~~kg~~~a 476 (477)
T pfam11700 462 PLLLLVDVEKGRREA 476 (477)
T ss_pred HHHHCCCHHHHHHHH
T ss_conf 998104687767641
No 80
>PRK10207 inner membrane transporter YhiP; Provisional
Probab=99.88 E-value=2.5e-18 Score=108.16 Aligned_cols=146 Identities=15% Similarity=0.169 Sum_probs=121.1
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHH
Q ss_conf 87389989999998099989999999999999999999999999852-62899999999764321000000132024678
Q gi|254780843|r 27 TSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRY-GYIKGICTGLLIMSLGCILFTATIEITTFKVF 105 (420)
Q Consensus 27 ~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~-Grr~~l~~~~~~~~i~~ll~~~a~~~~~~~~~ 105 (420)
+++...+.-.+.+++|+|+.++..+.+.|..-.-+..++.|+++||+ |+||.+..|.++.++|.++.+.+...++ .+
T Consensus 31 YGm~aiLvlyl~~~Lg~s~~~A~~i~g~f~alvYl~pi~GG~iADr~LG~~rti~~G~il~~~G~~~l~~s~~~~~--~~ 108 (490)
T PRK10207 31 YGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPD--LI 108 (490)
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHH--HH
T ss_conf 9999999999998849998899999999999999999869999897234079999999999999999986522457--99
Q ss_pred HHHHHHHHHHHHHHHHHHHCCHHCCCCH--HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHH
Q ss_conf 9998877756788876531000012303--57887766443110000345478888864123420467765
Q gi|254780843|r 106 LIALCILAIGVVIIQVALNPFISLLGDP--NTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSML 174 (420)
Q Consensus 106 ~~~~~i~g~g~~~~~~~~~~~~~~~~~~--~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~ 174 (420)
.....+..+|.|..-+...+.+.+.+++ .+|.+..++.+.+.++|..++|.+.+.+.+..+++..+...
T Consensus 109 ~~gL~lI~iG~Gl~Kpnis~~vg~lY~~~d~rrd~~FtiFYmgINiGa~l~~ll~g~l~~~~G~~~~F~~a 179 (490)
T PRK10207 109 FIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLC 179 (490)
T ss_pred HHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999556447887667888606889820202036999999999999999889999886277677778
No 81
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.88 E-value=2.8e-18 Score=107.92 Aligned_cols=368 Identities=8% Similarity=0.010 Sum_probs=187.6
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHCH
Q ss_conf 97531120059999999999999999873899-899999980999899999999999999999999999998----5262
Q gi|254780843|r 1 MKDTIARNIQCTKIYIFILFFLFGGITSLNSI-LVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQ----RYGY 75 (420)
Q Consensus 1 m~~~~~k~~~~~~i~i~~~ff~~g~~~~~~~~-~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~D----r~Gr 75 (420)
||=+++.|.-|..=- +-.++..+..+. +.....|.+|++...+|.+..+.-+--++.-|..|.++| |+||
T Consensus 1 ~kls~~~Ki~Yg~Gd-----~~~~~~~~~~~~fl~~fyTdv~Gl~~~~~g~i~~i~ri~DAitDPi~G~isDrt~tr~Gr 75 (473)
T PRK10429 1 MSISMTTKLSYGFGA-----FGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNATRSRWGK 75 (473)
T ss_pred CCCCHHHHHHHCCHH-----HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHEEEHHCCCCCCCC
T ss_conf 988678789652208-----787799999999999999986198899999999999999993433332501068998888
Q ss_pred HH-HHHHHHHHHHHHHHCCHHCCCCC---HHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC-HHHHHHHHHHHHHHCCCH
Q ss_conf 89-99999997643210000001320---24678999887775678887653100001230-357887766443110000
Q gi|254780843|r 76 IK-GICTGLLIMSLGCILFTATIEIT---TFKVFLIALCILAIGVVIIQVALNPFISLLGD-PNTAVSRLTFAQFFNSLG 150 (420)
Q Consensus 76 r~-~l~~~~~~~~i~~ll~~~a~~~~---~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g 150 (420)
|| -++.|.+..++...+....+..+ .+..+.+...+...+.........++..+..+ +++|.+..+........+
T Consensus 76 rrP~il~g~i~~~i~~~llf~~~~~~~~~~~~~~~~~yil~~~~yT~~~vPy~aL~~elT~D~~ERt~l~~~R~~~~~~~ 155 (473)
T PRK10429 76 FKPWILIGTLANSIVLFLLFSAHLFEGTAQIVFVCVTYILWGMTYTIMDIPFWSLVPTITLDKREREQLVPYPRFFASLA 155 (473)
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 45899889899999999997487865069999999999999999984156300000343068888999999999999999
Q ss_pred HHHHHHHHHHHHHCCCCCHH-HHH-HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCC-
Q ss_conf 34547888886412342046-776-555557789888642001121100134555543210123101233210001111-
Q gi|254780843|r 151 TAIFPYIGSVLMLGNLASPN-TSM-LADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKT- 227 (420)
Q Consensus 151 ~~~g~~~~~~l~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 227 (420)
..+.......+......... ... ............ ..........+...++ +.+.+++++...++.
T Consensus 156 ~~l~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~i----------~~~~~~~~~~e~~~~~-~~~~~~~~~~~l~~~~ 224 (473)
T PRK10429 156 GFVTAGVTLPFVNYVGGGDRGFGFQMFTLVLIAFFIV----------STIVTLRNVHEVYSSD-NGVSAEGSHLTLKDIV 224 (473)
T ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH----------HHHHHHHHCEECCCCC-CCCCCCCCCCCHHHHH
T ss_conf 9999999999996606985658999999999999999----------9999997020124554-4555555687899999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHH
Q ss_conf 22211111110001110001355677899998754201222101246888999987643100111111000000000124
Q gi|254780843|r 228 LDILANPRFTMGAVCIFLYVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCA 307 (420)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (420)
....+++..+.......+..............|..+. .+ +....+..........+.+......+.+|+++++....
T Consensus 225 ~~l~~N~~~~~l~~~~l~~~~~~~i~~~~~~Yy~~y~--lg-~~~~~~~~~~~~~i~~ii~~~~~~~l~kk~gKk~~~~~ 301 (473)
T PRK10429 225 ALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYV--IG-DADLFPYYLSYAGAANLVTLILFPRLVKLLSRRILWAG 301 (473)
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9997265999999999999999999999999999999--07-88899999999999999999999999999728999999
Q ss_pred HHHHHHHHHHHHH---HCC-H--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------H-HHHHHHHHH-HHHHHHHH
Q ss_conf 5555456768996---223-3--689999999999999999999999996301-------5-656999999-99999999
Q gi|254780843|r 308 FATTACSLVILSS---YTT-G--FISGWSLIAVGLFNSIMFPTIFSLASASLE-------D-QASGGSGII-CTTISGGV 372 (420)
Q Consensus 308 ~~~~~~~~~~~~~---~~~-~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~-~~~~~g~~ 372 (420)
............. ... . ........+.+++.+..+...+++..|..+ + +.+...+.. ...-+|.+
T Consensus 302 ~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~~~~~~g~~~~~~l~~sm~aDvvDy~E~ktG~R~eG~~~s~~sf~~K~~~a 381 (473)
T PRK10429 302 ASIFPVLSCGVLLLMALAAPHNALLIVLAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSA 381 (473)
T ss_pred HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999998050049999999999999888999999998315003889882884187999999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999999996123
Q gi|254780843|r 373 IIPLGVGYLVDIASL 387 (420)
Q Consensus 373 i~p~i~G~l~d~~g~ 387 (420)
++..+.|.+.+..|+
T Consensus 382 l~~~i~g~~L~~~Gy 396 (473)
T PRK10429 382 FAAFFIAVVLGMIGY 396 (473)
T ss_pred HHHHHHHHHHHHCCC
T ss_conf 999999999998087
No 82
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.87 E-value=1.2e-17 Score=104.80 Aligned_cols=384 Identities=11% Similarity=0.075 Sum_probs=228.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----CHHH-HHHHHHHHHH
Q ss_conf 999999999999987389989999998099989999999999999999999999999852-----6289-9999999764
Q gi|254780843|r 14 IYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRY-----GYIK-GICTGLLIMS 87 (420)
Q Consensus 14 i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~-----Grr~-~l~~~~~~~~ 87 (420)
..+..+-|..|+-..+++..++..-+|-|+|.+++|+. |...+.| ...+.+.++.||+ |||| -++..-+...
T Consensus 15 ~~~llLGFsSGLPl~L~~~tL~~WLr~~Gvsl~tIGlf-slv~lpY-slKFLWAPlvDr~~~P~LGrRRsWill~Q~~l~ 92 (490)
T PRK11010 15 AILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLL 92 (490)
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99999998500419999979999998879988999999-9999999-999998878856478778734799999999999
Q ss_pred HHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 32100000013202467899988777567888765310000123035788776644311000034547888886412342
Q gi|254780843|r 88 LGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLA 167 (420)
Q Consensus 88 i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 167 (420)
++...++...-.++.+.+.....+..+..+....+..++-.|..++++++...+....++-+|..++....-.+.+...+
T Consensus 93 ~~l~~ma~~~P~~~l~~~a~~allvAf~SATQDIaiDAyRiE~l~~~eqg~gaa~~v~GYRigmlvsGa~aL~lAd~~~g 172 (490)
T PRK11010 93 VAIAAMGFLEPGTQLRWMAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLGMLVSGGLALWLADRWLG 172 (490)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999997596757999999999999998778999989999836861335899999999999999987999999876226
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 04677655555778988864200112110013455554321012310123321000111122211111110001110001
Q gi|254780843|r 168 SPNTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYV 247 (420)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (420)
|...+...................+ ++.....+.-.+....+..+..+++..+.....+..+.
T Consensus 173 W~~~Y~~mA~lml~g~~~tl~~pEP-----------------~~~~~~~~~l~~avv~Pf~~Ff~R~~a~lIL~fI~lYK 235 (490)
T PRK11010 173 WQGMYWLMAALLIPCIIATLLAPEP-----------------TDTIPVPKTLEQAVVAPLRDFFGRNNAWLILLLIVLYK 235 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCC-----------------CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf 5999999999999999999838886-----------------55543313799999999999997068999999999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH-HHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHH----C
Q ss_conf 3556778999987542012221012468889999-8764310011111100000000012455554567689962----2
Q gi|254780843|r 248 GAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIY-WGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSY----T 322 (420)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 322 (420)
............+.. ++.|++..+.+...-.. ....+.+...++....|.+..+.+...........+.... .
T Consensus 236 lgDa~~g~M~~pFyl--~dlGFS~~eIa~v~K~~Gl~atI~G~~lGG~li~R~Gl~raL~i~gilqalsNL~f~~LA~~g 313 (490)
T PRK11010 236 LGDAFAMSLTTTFLI--RGVGFDAGEVGVVNKTLGLLATIVGALYGGILMQRLSLFRALLIFGILQGASNAGYWLLSITD 313 (490)
T ss_pred HHHHHHHHHHHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 679999998668877--432888889998885899999999999999999997299999999999996789999999708
Q ss_pred CHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 3368999-999999999999999999999630156-5699-999999999999999999999996123799999999999
Q gi|254780843|r 323 TGFISGW-SLIAVGLFNSIMFPTIFSLASASLEDQ-ASGG-SGIICTTISGGVIIPLGVGYLVDIASLRDAMFVPAVCYI 399 (420)
Q Consensus 323 ~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~g~~i~p~i~G~l~d~~g~~~~~~~~~~~~~ 399 (420)
++..... ....=.++.+.......+..++...++ +.+- +-......++..+.+...|++.|..||..-|..+.++ .
T Consensus 314 ~~~~~l~~aI~~Enf~~G~gtaAfvAyLssL~n~~ftATQYALlSSl~al~r~~~g~~SG~lve~~Gw~~FFi~t~~~-~ 392 (490)
T PRK11010 314 KNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAA-A 392 (490)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHH-H
T ss_conf 848999999999988878999999999998538322599999999999722563156588984751838799999999-9
Q ss_pred HHHHHHHHHHHHHHCCCCCC
Q ss_conf 99999998531110201279
Q gi|254780843|r 400 IIAIYGIYCCYKENNFEQNT 419 (420)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~ 419 (420)
+=.+..++.+||+-+..|++
T Consensus 393 IP~llLL~~~r~~l~~~~~~ 412 (490)
T PRK11010 393 VPGLLLLLVCRQTLEYTQKT 412 (490)
T ss_pred HHHHHHHHHHHHHHHHCCCC
T ss_conf 89999999997353430553
No 83
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.87 E-value=5.5e-18 Score=106.46 Aligned_cols=376 Identities=12% Similarity=-0.006 Sum_probs=213.8
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHH----HHHHHCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
Q ss_conf 9999999999999987389-98999----999809998-99999999999999999999999998526289999999976
Q gi|254780843|r 13 KIYIFILFFLFGGITSLNS-ILVPK----LQNSFSLTY-LQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIM 86 (420)
Q Consensus 13 ~i~i~~~ff~~g~~~~~~~-~~~p~----l~~~~~~s~-~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~ 86 (420)
+.-.+..-|+-.|.++..- .++-. ..++.+.+. ....+...+|.+.+.+++.++|.++|||.+++++...-..-
T Consensus 14 F~p~f~tQflgAfNDN~~K~alv~li~~~~~~~~~~~~~~l~~la~alFiLPF~Lfsa~aG~LADk~~K~~iir~~K~~E 93 (1139)
T PRK06814 14 FAPLFWTQFFGAFNDNFLKNALVILILYGLSGALSKYGALLVTLANAVFILPFFILSGLAGQLADKYDKAKLIKILKFAE 93 (1139)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf 38999999980888899999999999987512567654699999999999999998621656545164889999999999
Q ss_pred HHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
Q ss_conf 43210000001320246789998877756788876531000012303578877664431100003454788888641234
Q gi|254780843|r 87 SLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNL 166 (420)
Q Consensus 87 ~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 166 (420)
....++...+-...+++.++...++.|.-++...|+-+.++.|..++++-....++..++..++...|...++.+.....
T Consensus 94 i~im~l~~~~~~~~~~~~l~~~lflmg~qSa~FgP~KYgiLpe~l~~~eL~~gNglve~~Tf~AIL~Gti~gg~l~~~~~ 173 (1139)
T PRK06814 94 IGIAALAIYGFHLNSVPLLFAALGLFGIHSAFFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLYTISGN 173 (1139)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999986599999999999999986608999887986591215144339999999999999999999996586
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 20467765555577898886420011211001345555432101231012332100011112221111111000111000
Q gi|254780843|r 167 ASPNTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLY 246 (420)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (420)
..... ..........+.......... ...+....+...........+...+++..+...+....+
T Consensus 174 ~~~~~----~~~~~~Av~g~~~s~~ip~~~-----------~~~p~~~~~~~~~~~~~~~l~~~~~~~~l~~ailgiSwF 238 (1139)
T PRK06814 174 FVILG----YSLMGIAVLGWLASLFIPKTG-----------NAAPDLKIDRNIIRSTITLLKYAKADKRLWLAILGISWF 238 (1139)
T ss_pred CHHHH----HHHHHHHHHHHHHHHHCCCCC-----------CCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_conf 38999----999999999999995088999-----------889988534346899999999987391799999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHH-----
Q ss_conf 135567789999875420122210124688899998764310011111100000000012455554567689962-----
Q gi|254780843|r 247 VGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSY----- 321 (420)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 321 (420)
..........++.|.... ++.+......+...+.++...++....+++++.-.....-.++....+..+....
T Consensus 239 W~~ga~~l~~~p~~~k~~--l~~~~~~~~~lla~fsiGI~~GS~la~~ls~~~ie~glvp~Ga~g~~~~~~~L~~~~~~~ 316 (1139)
T PRK06814 239 WLIGAVVLSQLPLLAKDT--LGGDENVVTLFLAVFSIGIAVGSFLCSKLLEGEITLLYVPIGALGMGIFGLDLAFASSSV 316 (1139)
T ss_pred HHHHHHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 999999999709999998--189788999999999999999999999994798013300788999999999999871247
Q ss_pred ----------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf ----------------23368999999999999999999999999630156--569999999999999999999999999
Q gi|254780843|r 322 ----------------TTGFISGWSLIAVGLFNSIMFPTIFSLASASLEDQ--ASGGSGIICTTISGGVIIPLGVGYLVD 383 (420)
Q Consensus 322 ----------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~i~p~i~G~l~d 383 (420)
...+.....++++|++.+......++......++. .+..++-+....++...+. +...+..
T Consensus 317 ~~~~~~~~~~~~f~~~~~~~~~~~~l~~~g~~gGlfiVPL~A~iQ~~a~~~~r~rviAanNiln~~~Mv~~~-~~~~~l~ 395 (1139)
T PRK06814 317 PAEPTQLKSILVFLSKRHGWRILIDLFFLAIIGGLYIVPLFAALQAWANPAHRARVIAANNVINAIFMVGGT-IILAVLQ 395 (1139)
T ss_pred CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
T ss_conf 788503657999971623499999999999745004522589988528876667877999999999999999-9999999
Q ss_pred HHHH--HHHHHHHHHHHHHHHHHHH
Q ss_conf 6123--7999999999999999999
Q gi|254780843|r 384 IASL--RDAMFVPAVCYIIIAIYGI 406 (420)
Q Consensus 384 ~~g~--~~~~~~~~~~~~~~~~~~~ 406 (420)
..|. ..-|+++++..+++++|.+
T Consensus 396 ~~~~s~~~~f~~~~~~~~~~~~y~~ 420 (1139)
T PRK06814 396 ALGFSIPWILLFLALANLIVAIYIL 420 (1139)
T ss_pred HCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 8398899999999999999999999
No 84
>KOG0253 consensus
Probab=99.86 E-value=3.4e-20 Score=117.53 Aligned_cols=374 Identities=13% Similarity=0.020 Sum_probs=214.1
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHH
Q ss_conf 89989999998099989999999999999999999999999852628999999997643210000001320246789998
Q gi|254780843|r 30 NSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATIEITTFKVFLIAL 109 (420)
Q Consensus 30 ~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~~~~~~~~~~~~ 109 (420)
.+-+.|.+++..+.+..|..++.+..+.|..+++..+|.++|++|||+.+........+...+. ...++|..+.+.|
T Consensus 97 ~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is---~~spnf~~L~~f~ 173 (528)
T KOG0253 97 LSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVIS---GASPNFASLCVFR 173 (528)
T ss_pred HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHCCHHHHHHHHHHHHHHHHH---CCCCCEEHHHHHH
T ss_conf 9998788774225666656577888875221435341000404411021113477788888752---4798731146788
Q ss_pred HHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 87775678887653100001230357887766443110000345478888864123420467765555577898886420
Q gi|254780843|r 110 CILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSMLADTMKDYQTDTARVI 189 (420)
Q Consensus 110 ~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (420)
.+.|.|.|. .|...++-.+..|..+|...+... +.+..|.+....+........+|.+..... ............++
T Consensus 174 ~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~-~~pl~~~a~f~~w~ 250 (528)
T KOG0253 174 ALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTS-STPLMFAARFLVWV 250 (528)
T ss_pred HHHHCCCCC-CCHHHHHHHHHCCCCCCCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHC
T ss_conf 788625788-608677787744676777210478-988779999999999998751299999998-70899999999625
Q ss_pred CCCCCCCHH---HHHHHHHHHH-------------CC-----CCCCHHH----------HHHHCCCCCCCCCCCCCCCCC
Q ss_conf 011211001---3455554321-------------01-----2310123----------321000111122211111110
Q gi|254780843|r 190 SQMYLVLAI---ILFLATWLCW-------------MQ-----RNSFADH----------KRNHISFLKTLDILANPRFTM 238 (420)
Q Consensus 190 ~~~~~~~~~---~~~~~~~~~~-------------~~-----~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~ 238 (420)
......... .....+...+ .. +.++++. ++......+......++....
T Consensus 251 ~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lrkttll 330 (528)
T KOG0253 251 YESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSPKLRKTTLL 330 (528)
T ss_pred CCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHCHHHHHHCCCCCCCCCHHHHCCHHHHHHHHH
T ss_conf 65741045439857799999999984488789613330022344443300001110122355544576537677777799
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-----------------CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHC
Q ss_conf 0011100013556778999987542012221-----------------01246888999987643100111111000000
Q gi|254780843|r 239 GAVCIFLYVGAEVAIGSIMANYLMRHDTLHL-----------------DGISAGQHTAIYWGSAMIGRFIGTWILSRFSA 301 (420)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (420)
.+...+.....+++............+..+. +....-.-.......-..+..+.....||+++
T Consensus 331 lw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGR 410 (528)
T KOG0253 331 LWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGR 410 (528)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
T ss_conf 99999703799888999999998605745530102416877640478640557899999998628706679999998631
Q ss_pred CCHHHHHHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH
Q ss_conf 000124555545676899622336-899999999999999999999999963015656999--99999999999999999
Q gi|254780843|r 302 EKTLCAFATTACSLVILSSYTTGF-ISGWSLIAVGLFNSIMFPTIFSLASASLEDQASGGS--GIICTTISGGVIIPLGV 378 (420)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~i~p~i~ 378 (420)
++.+........+..+........ ......+..-.+.+..+...+.+..|..|...++.+ ....++.+|+.+.|.++
T Consensus 411 KkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA 490 (528)
T KOG0253 411 KKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA 490 (528)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHEEEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_conf 35889999999999999998528416577999999998420008999567535214433130035667764013226999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999996123799999999999999999985311
Q gi|254780843|r 379 GYLVDIASLRDAMFVPAVCYIIIAIYGIYCCYK 411 (420)
Q Consensus 379 G~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (420)
...+. ....+..+...|+++..+-..+...+
T Consensus 491 -~~~e~-s~sl~i~vy~~~~ilagIavcffPiE 521 (528)
T KOG0253 491 -MRAEL-STSLPIFVYGALFILAGIAVCFFPIE 521 (528)
T ss_pred -HHHCC-CEEEHHHHHHHHHHHHHHHHEEEEEC
T ss_conf -98516-52441999989999998885460102
No 85
>PRK09848 glucuronide transporter; Provisional
Probab=99.85 E-value=4.3e-17 Score=101.96 Aligned_cols=366 Identities=9% Similarity=0.020 Sum_probs=182.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHCH
Q ss_conf 97531120059999999999999999873899-899999980999899999999999999999999999998----5262
Q gi|254780843|r 1 MKDTIARNIQCTKIYIFILFFLFGGITSLNSI-LVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQ----RYGY 75 (420)
Q Consensus 1 m~~~~~k~~~~~~i~i~~~ff~~g~~~~~~~~-~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~D----r~Gr 75 (420)
||++++-+.|...=+ --+-.+......+. +.....|.+|++...+|.+..+.-+--++..|..|.++| |+||
T Consensus 1 ~~~kls~~~ki~Yg~---G~~~~~~~~~~~~~~l~~fyTdv~Gl~~~~vG~i~~i~ri~DAvtDPl~G~lsDrt~tr~Gr 77 (457)
T PRK09848 1 MNQQLSWRTIVGYSL---GDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGK 77 (457)
T ss_pred CCCCCCHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCC
T ss_conf 998566678756122---17687799999999999999986198899999999999999993345005741069999888
Q ss_pred HHHHH-HHHHHHHHHHHCCHHCC-C---CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC-HHHHHHHHHHHHHHCCC
Q ss_conf 89999-99997643210000001-3---2024678999887775678887653100001230-35788776644311000
Q gi|254780843|r 76 IKGIC-TGLLIMSLGCILFTATI-E---ITTFKVFLIALCILAIGVVIIQVALNPFISLLGD-PNTAVSRLTFAQFFNSL 149 (420)
Q Consensus 76 r~~l~-~~~~~~~i~~ll~~~a~-~---~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~ 149 (420)
||..+ .|.+..++...+....+ . ...+....+...+...+.........++..+..+ +++|.+..+....+..+
T Consensus 78 rrP~il~g~ip~~i~~~llf~~P~~~~~~~~~~~~~~~yi~~~~~~T~~~iPy~aL~~elT~d~~eRt~l~~~r~i~~~i 157 (457)
T PRK09848 78 FRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASL 157 (457)
T ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 24999999999999999999577554630899999999999999999998469763713079999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCHHHH--HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCC
Q ss_conf 03454788888641234204677--6555557789888642001121100134555543210123101233210001111
Q gi|254780843|r 150 GTAIFPYIGSVLMLGNLASPNTS--MLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKT 227 (420)
Q Consensus 150 g~~~g~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (420)
+......+............... ................ ... ...+++.. +.+++.......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~----------~~~----~~~~e~~~--~~~~~~~~~~~~ 221 (457)
T PRK09848 158 TFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIAGMVLYF----------ICF----KSTRENVV--RIVAQPSLKISL 221 (457)
T ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH----------HHH----CCCCCCCC--CCCCCCCHHHHH
T ss_conf 99999999999862568600789999999999999999999----------985----35335644--435686589999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHH
Q ss_conf 22211111110001110001355677899998754201222101246888999987643100111111000000000124
Q gi|254780843|r 228 LDILANPRFTMGAVCIFLYVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCA 307 (420)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (420)
+...+++..+.......+..............|.... .+.+.............+.+...+....+.+|+++++....
T Consensus 222 ~~~~~N~~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~--l~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~r~gKk~~~~~ 299 (457)
T PRK09848 222 QTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYV--LNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLI 299 (457)
T ss_pred HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9998376899999999999999999999999999999--37866899999999999999999999999999667999999
Q ss_pred HHHHHHHHHHHHHHCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HH-HHHHHHHH-HHHHHHHHHHH
Q ss_conf 55554567689962233---689999999999999999999999996301-------56-56999999-99999999999
Q gi|254780843|r 308 FATTACSLVILSSYTTG---FISGWSLIAVGLFNSIMFPTIFSLASASLE-------DQ-ASGGSGII-CTTISGGVIIP 375 (420)
Q Consensus 308 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-------~~-~~~~~~~~-~~~~~g~~i~p 375 (420)
.........+....... ........+.+++.+......+++..|..+ ++ .+...+.. ...-++.++++
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~sm~aDv~Dy~e~~tG~r~eG~~~s~~sf~~K~~~a~~~ 379 (457)
T PRK09848 300 GALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGG 379 (457)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999634359999999999999998999999999622667899960997045999999999999999999
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999996123
Q gi|254780843|r 376 LGVGYLVDIASL 387 (420)
Q Consensus 376 ~i~G~l~d~~g~ 387 (420)
.+.|++.+..|+
T Consensus 380 ~i~g~~L~~~Gy 391 (457)
T PRK09848 380 SIPAFILGLSGY 391 (457)
T ss_pred HHHHHHHHHCCC
T ss_conf 999999998196
No 86
>PRK09669 putative symporter YagG; Provisional
Probab=99.84 E-value=1.3e-16 Score=99.56 Aligned_cols=343 Identities=13% Similarity=0.031 Sum_probs=184.9
Q ss_pred HHHHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HCHHHH-HHHHHHHHHHHHHCCHHCCCCC
Q ss_conf 87389-98999999809998999999999999999999999999985----262899-9999997643210000001320
Q gi|254780843|r 27 TSLNS-ILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQR----YGYIKG-ICTGLLIMSLGCILFTATIEIT 100 (420)
Q Consensus 27 ~~~~~-~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr----~Grr~~-l~~~~~~~~i~~ll~~~a~~~~ 100 (420)
....+ -+.....+.+|+|...+|++....-+--++.-|..|.++|| +||||. +..+.+..++...+....+...
T Consensus 23 ~~~~~~~l~~fyt~v~Gl~~~~vg~i~~i~ri~Dai~DPliG~lsDrt~tr~Grrrp~il~~~ip~~l~~~llf~~p~~~ 102 (442)
T PRK09669 23 WQTVMLFLAYFYTDVFGLSAAIMGTMFLLVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCMLTFYTPDFS 102 (442)
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99999999999998609789999999999999999352234113426899876613999999999999999999578888
Q ss_pred H---HHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC-HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCH--HHHHH
Q ss_conf 2---4678999887775678887653100001230-3578877664431100003454788888641234204--67765
Q gi|254780843|r 101 T---FKVFLIALCILAIGVVIIQVALNPFISLLGD-PNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASP--NTSML 174 (420)
Q Consensus 101 ~---~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~--~~~~~ 174 (420)
. +..+.+...+...+.........++..|..+ +++|.+..+........|..+...+...+........ .....
T Consensus 103 ~~~~~~~~~~~~~l~~~~~T~~~iPy~aL~~elt~d~~eRt~l~~~r~~~~~~g~~i~~~~~~~~~~~~~~~~~~~g~~~ 182 (442)
T PRK09669 103 ETGKIIYACVTYILLTLVYTAINVPYCAMPGVITNDPKERHSLQSWRFALSTAGGLIVSGIALPLVDWIGKGDEQKGYFG 182 (442)
T ss_pred CCHHHHHHHHHHHHHHHHHHHEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 30899999999999999988700133540211068888999999999999999999999999999987178624349999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 55557789888642001121100134555543210123101233210001111222111111100011100013556778
Q gi|254780843|r 175 ADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYVGAEVAIG 254 (420)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (420)
.................. . . + ++ ...++++++...++.+...+++..+.......+.........
T Consensus 183 ~~~~~~~i~~~~~~~~~~-~---------~---~-e~-~~~~~~~~~~~~~~~~~~~~N~~~~~l~~~~~~~~~~~~~~~ 247 (442)
T PRK09669 183 AMCVMGLLGVVLFFVCFF-T---------T---K-ER-YTFEVQPQSSVLKDLKLLLANSQWRILFAFNVVLLTAVVVRG 247 (442)
T ss_pred HHHHHHHHHHHHHHHHHC-C---------C---C-CC-CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999960-4---------4---3-56-687666774499999999856199999999999999999997
Q ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCC---HHHHHHHH
Q ss_conf 999987542012221012468889999876431001111110000000001245555456768996223---36899999
Q gi|254780843|r 255 SIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYTT---GFISGWSL 331 (420)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 331 (420)
.....|.... .+.+ ...+............+......+.+|+++++...................+ ........
T Consensus 248 ~~~~y~~~y~--l~~~-~~~~~~~~~~~~~~i~~~~~~~~l~~k~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (442)
T PRK09669 248 GATLYYVKYV--MGRP-DLATLFLVYGMIANMFGALLSSRLLGRFDRVKAFKWIIIAYSVLSALIFFIPAENIALIFALN 324 (442)
T ss_pred HHHHHHHHHH--HCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 6899999999--0777-799999999999999999999999999658999999999999999999995752399999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-------H-HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999963015-------6-56999999-99999999999999999996123
Q gi|254780843|r 332 IAVGLFNSIMFPTIFSLASASLED-------Q-ASGGSGII-CTTISGGVIIPLGVGYLVDIASL 387 (420)
Q Consensus 332 ~~~g~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~-~~~~~g~~i~p~i~G~l~d~~g~ 387 (420)
.+.+++.+......+++..|..+. + .+...+.. ...-++.++++.+.|.+.+..|+
T Consensus 325 ~l~g~~~~~~~~l~~sm~aDviD~~e~~tG~R~eG~~~s~~~f~~K~~~al~~~i~g~~L~~~Gy 389 (442)
T PRK09669 325 ILFLFVQNTTTPLQWSMASDVVDYEESRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 389 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999989998775888778603998502999999999999999999999999998396
No 87
>TIGR00880 2_A_01_02 Multidrug resistance protein; InterPro: IPR004734 Multidrug resistance proteins are molecular pumps that participate in a low energy shock adaptive response in some bacteria. They mediate cellular resistance to toxicants such as cycloheximide (CYH), 4-nitroquinoline N-oxide (4-NQO), cadmium, and hydrogen peroxide in yeast .; GO: 0015238 drug transporter activity, 0015893 drug transport, 0016021 integral to membrane.
Probab=99.83 E-value=1.2e-19 Score=114.81 Aligned_cols=134 Identities=21% Similarity=0.205 Sum_probs=113.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCH
Q ss_conf 999999999999999999999985262899999999764321000000-1320246789998877756788876531000
Q gi|254780843|r 49 MLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTAT-IEITTFKVFLIALCILAIGVVIIQVALNPFI 127 (420)
Q Consensus 49 g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a-~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~ 127 (420)
|+....|-++.++.+|+++.+.||+|||++++++..++.++.+.++++ + .+|++.+.+.|+++|++.+...+...+.+
T Consensus 1 g~~~~~yAl~q~~~~P~~~~l~~r~GRk~~~~~g~~~f~~~~~~~al~nP-h~~~~~L~i~R~~~G~~~~~~~~~g~a~~ 79 (148)
T TIGR00880 1 GLLVAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSQALFALSNP-HSNITVLIISRFLQGFGAAAALVAGAALI 79 (148)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 87999999999999999999884216289999999999999999884487-23799999999999998889999898888
Q ss_pred HCCCCHH-HHHHHHHHHHHHCCCHHHHHHHHHHHHH---HCCCCCHHHHHHHHHHHHHHH
Q ss_conf 0123035-7887766443110000345478888864---123420467765555577898
Q gi|254780843|r 128 SLLGDPN-TAVSRLTFAQFFNSLGTAIFPYIGSVLM---LGNLASPNTSMLADTMKDYQT 183 (420)
Q Consensus 128 ~~~~~~~-~r~~~~~~~~~~~~~g~~~g~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~ 183 (420)
.|.++++ +|++.++....+...|..+||.+++.+. +...|+..++...........
T Consensus 80 aD~~~~~~~~~~a~g~~~~~~~~g~~lgP~~G~~~~~~~~~~~wr~~F~~~~~~~~~~~~ 139 (148)
T TIGR00880 80 ADIYPPEEERSVALGLMSAGIALGPILGPPLGGVLANVKQALGWRAPFLILAALALAAFI 139 (148)
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 774264047889999999999999999999989998755401765899999999999999
No 88
>pfam03137 OATP Organic Anion Transporter Polypeptide (OATP) family. This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules). Thus, Tamai et al. initiated the current scheme of using digits for rat OATPs and letters for human ones. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. Thi
Probab=99.83 E-value=4.8e-19 Score=111.77 Aligned_cols=288 Identities=15% Similarity=0.099 Sum_probs=185.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHC
Q ss_conf 99999999999999873899899999980999899999999999999999999999998526289999999976432100
Q gi|254780843|r 13 KIYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCIL 92 (420)
Q Consensus 13 ~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll 92 (420)
++++..+.++.+...+.....++.++++|+++.+|.|++.+.+-++..+..++..+..+|..|-|.+-+|.+++++|+++
T Consensus 5 l~~l~~~~~~Q~~v~gy~~~~ittiEkRF~l~S~~~G~I~s~~di~~~i~~~~vsy~G~~~hrprwig~G~~l~~lG~~l 84 (582)
T pfam03137 5 LLLLGLAALLQLLVNGYFKSSITTIEKRFKISSSISGIISSSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLLIMALGSLL 84 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHH
T ss_conf 68999999999998773210021124436998321123442977999999999997175278761100989999999999
Q ss_pred CHHCCCC---------------------------------------------CHHHHHHHHHHHHHHHHHHHHHHHHCCH
Q ss_conf 0000132---------------------------------------------0246789998877756788876531000
Q gi|254780843|r 93 FTATIEI---------------------------------------------TTFKVFLIALCILAIGVVIIQVALNPFI 127 (420)
Q Consensus 93 ~~~a~~~---------------------------------------------~~~~~~~~~~~i~g~g~~~~~~~~~~~~ 127 (420)
+++-.+. .-+.++.+.+++.|+|....++...+++
T Consensus 85 ~alPhFl~g~y~~~~~~~~~~~~~~~~~lc~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~q~l~GiG~tp~~tLG~tYi 164 (582)
T pfam03137 85 TALPHFLYGPYSYESTNLTGSNESSNSTLCHGGALIPSPCQSEGCCHKEGTSLMWLLFFVAQLLRGIGATPIFTLGISYI 164 (582)
T ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHCCCHHH
T ss_conf 97678606886135344555666777533468887766566533235765208999999999985154674130361143
Q ss_pred HCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC-----------------HHHHHHHHHHHH---HHHHHHH
Q ss_conf 01230357887766443110000345478888864123420-----------------467765555577---8988864
Q gi|254780843|r 128 SLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLAS-----------------PNTSMLADTMKD---YQTDTAR 187 (420)
Q Consensus 128 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~-----------------~~~~~~~~~~~~---~~~~~~~ 187 (420)
.|..++++.+..+++..+...+|..+|.++++.+......+ ...+++...... .......
T Consensus 165 Ddnv~~~~s~~Yigi~~~~~~lGP~~Gf~lg~~~L~~yvd~~~~~~~~~~i~~~dprWvGAWWLGfli~g~~~~~~aipl 244 (582)
T pfam03137 165 DDNVKSKNSPLYLGILFTLAMFGPAIGFLLGSFCLRLYVDFGRVPTEDVIITPTDPRWVGAWWLGFLVCGGLLLLSAIPF 244 (582)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 16777455719999999998764689999999888500155668865466787881477788889999999999999999
Q ss_pred HHCCCCCCCHHHHHHHHHHHHCCCCCCHHH-----------HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 200112110013455554321012310123-----------321000111122211111110001110001355677899
Q gi|254780843|r 188 VISQMYLVLAIILFLATWLCWMQRNSFADH-----------KRNHISFLKTLDILANPRFTMGAVCIFLYVGAEVAIGSI 256 (420)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (420)
..++..+.............+..++.+.++ +..++.....++..+++.................+...+
T Consensus 245 ~~FPk~Lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~a~~~Ll~N~~~m~~~l~~~~~~~~~~G~~tF 324 (582)
T pfam03137 245 FFFPKELPKAGRLASLDLTRPKAKDETRKQAEEPKSGKSAPRFLKDFPKSLKRLLTNPTFMLVVLAQIFESSVIAGYSTF 324 (582)
T ss_pred HHCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 83851158403221122100233102232023333332011557789999999975919999999999999999889887
Q ss_pred HHHHHHHHCCCCCCHHHHHHHHHHH-HHHHHHHCCCCCCCCCHHHCC
Q ss_conf 9987542012221012468889999-876431001111110000000
Q gi|254780843|r 257 MANYLMRHDTLHLDGISAGQHTAIY-WGSAMIGRFIGTWILSRFSAE 302 (420)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 302 (420)
.+.|...+.. .+...+..+.... ..+...+..+++.+.+|++..
T Consensus 325 ~pKylE~qF~--~sas~A~~l~G~i~vp~~~~G~llGG~ivkk~kl~ 369 (582)
T pfam03137 325 LPKYLETQYG--QSASYANFLTGVVALPAAAVGILIGGYIIKKFKLT 369 (582)
T ss_pred HHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCC
T ss_conf 5788898828--87899999998788888899987543213220767
No 89
>PRK11462 putative transporter; Provisional
Probab=99.82 E-value=1.5e-16 Score=99.30 Aligned_cols=344 Identities=10% Similarity=0.094 Sum_probs=176.2
Q ss_pred HHHHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHCHHH-HHHHHHHHHHHHHHCCHHCCCC-
Q ss_conf 87389-9899999980999899999999999999999999999998----526289-9999999764321000000132-
Q gi|254780843|r 27 TSLNS-ILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQ----RYGYIK-GICTGLLIMSLGCILFTATIEI- 99 (420)
Q Consensus 27 ~~~~~-~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~D----r~Grr~-~l~~~~~~~~i~~ll~~~a~~~- 99 (420)
.+..+ -++....|.+|++...+|.+..+.-+--++.-|..|.++| |+|||| -+++|.+..++...++...+..
T Consensus 25 ~~~~~~~l~~fytdv~Gl~~~~~g~i~~i~ri~DAitDPi~G~isDrt~tr~GrrrP~il~gaip~~l~~~llf~~P~~s 104 (460)
T PRK11462 25 FDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLS 104 (460)
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999999999999609789999999999999999243500463016899988836678688899999999996288878
Q ss_pred --CHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC-HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf --024678999887775678887653100001230-35788776644311000034547888886412342046776555
Q gi|254780843|r 100 --TTFKVFLIALCILAIGVVIIQVALNPFISLLGD-PNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSMLAD 176 (420)
Q Consensus 100 --~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~ 176 (420)
..+..+.+...+...+.........++..+..+ +++|.+..+........|..+...+...+...............
T Consensus 105 ~~~~~~y~~v~y~l~~~~yT~~~iPy~aL~~elT~d~~ERt~l~~~R~~~~~~g~~~~~~~~~~lv~~~g~~~~~~g~~~ 184 (460)
T PRK11462 105 MNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQG 184 (460)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 11899999999999999988645368752478648999999999999999999999999999999999669843789999
Q ss_pred HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 55778988864200112110013455554321012310123321000111122211111110001110001355677899
Q gi|254780843|r 177 TMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYVGAEVAIGSI 256 (420)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (420)
............... ..... .++.+ .++++....+..+...+++..+.......+...........
T Consensus 185 ~~~v~~vi~~i~~~~--------~~~~~----ke~~~--~~~~~~s~~~~l~~~~~N~~~~~l~~~~~~~~~~~~~~~~~ 250 (460)
T PRK11462 185 GIAVLSVVAFMMLAF--------CFFTT----KERVE--APPTTTSMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGA 250 (460)
T ss_pred HHHHHHHHHHHHHHH--------HHHCC----CCCCC--CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999--------99522----03666--88664239999999973838999999999999999999999
Q ss_pred HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHH---CCHHHHHHHHHH
Q ss_conf 99875420122210124688899998764310011111100000000012455554567689962---233689999999
Q gi|254780843|r 257 MANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSY---TTGFISGWSLIA 333 (420)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 333 (420)
...|... ..+... .............+.+........+|.+++..................+ ...........+
T Consensus 251 ~~yy~~y--~lg~~~-~~~~~~~~~~i~~li~~~l~~~l~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (460)
T PRK11462 251 MMYYVTW--ILGTPE-VFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFV 327 (460)
T ss_pred HHHHHHH--CCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 8888863--168789-9999999999999999999999999999999999999999999999999653329999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-------HH-HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999996301-------56-5699-999999999999999999999996123
Q gi|254780843|r 334 VGLFNSIMFPTIFSLASASLE-------DQ-ASGG-SGIICTTISGGVIIPLGVGYLVDIASL 387 (420)
Q Consensus 334 ~g~~~~~~~~~~~~~~~~~~~-------~~-~~~~-~~~~~~~~~g~~i~p~i~G~l~d~~g~ 387 (420)
.|.+.+...+..+++..|..+ ++ .+.. +......-+|.++++.+.|.+.+..|+
T Consensus 328 ~g~~~~~~~~l~~am~aDvvDy~e~ktG~R~eG~~~s~~~f~~K~~~al~~~i~g~~L~~~Gy 390 (460)
T PRK11462 328 IGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 999999999999998665877778871986189999999999999999999999999998588
No 90
>KOG2563 consensus
Probab=99.82 E-value=1.6e-19 Score=114.22 Aligned_cols=378 Identities=15% Similarity=0.113 Sum_probs=232.5
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCCC---CHHH--
Q ss_conf 38998999999809998999999999999999999999999985262899999999764321000000132---0246--
Q gi|254780843|r 29 LNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATIEI---TTFK-- 103 (420)
Q Consensus 29 ~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~~---~~~~-- 103 (420)
-.++...+..+.++ |...+-|..-+|.+.+....+++-|+.||+|-|....++.....+|..+-..+... +.++
T Consensus 63 ~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~ 141 (480)
T KOG2563 63 QYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRP 141 (480)
T ss_pred EEHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHH
T ss_conf 11237779988722-12789999989999988877778876201314889999999999989874101575556421135
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH-HH
Q ss_conf 78999887775678887653100001230357887766443110000345478888864123420467765555577-89
Q gi|254780843|r 104 VFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSMLADTMKD-YQ 182 (420)
Q Consensus 104 ~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~-~~ 182 (420)
+......+.+..+.+...........|+++++|..+-.....+..+|..++.++...+...........+....... ..
T Consensus 142 l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~ 221 (480)
T KOG2563 142 LTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVE 221 (480)
T ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHH
T ss_conf 56776889987652711266078786379323343446787425587899760575560699875116788999999999
Q ss_pred HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88864200112110013455554321012310123321000111122211111110001110001355677899998754
Q gi|254780843|r 183 TDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYVGAEVAIGSIMANYLM 262 (420)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (420)
....... . .........++.++........+....+..++..+++.+...........+........+. .
T Consensus 222 ~l~~l~l--~-----l~~~~~~~~P~tPps~s~~~~~~~~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~---~ 291 (480)
T KOG2563 222 CLAALLL--A-----LVLFVFTKKPPTPPSASQAALQDASFPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLN---L 291 (480)
T ss_pred HHHHHHH--H-----HHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH---H
T ss_conf 9999999--9-----9997157899989766776441375789999997384569999998532899999999844---2
Q ss_pred HHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHH--HHHHHC----CHHHHHHHHHHHHH
Q ss_conf 201222101246888999987643100111111000000000124555545676--899622----33689999999999
Q gi|254780843|r 263 RHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLV--ILSSYT----TGFISGWSLIAVGL 336 (420)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~~~g~ 336 (420)
.....+++....|..........+.+....+...||.+..+............. .+...+ ...+......++|+
T Consensus 292 ~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~ 371 (480)
T KOG2563 292 ALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGF 371 (480)
T ss_pred HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHH
T ss_conf 10126677422435679999988999988875443553589999999998999999998751057846750566899998
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH----HHHHHHH-HHHHHHHHH-HHHHHH
Q ss_conf 99999999999999630-15656999999-9999999999999999999612----3799999-999999999-999985
Q gi|254780843|r 337 FNSIMFPTIFSLASASL-EDQASGGSGII-CTTISGGVIIPLGVGYLVDIAS----LRDAMFV-PAVCYIIIA-IYGIYC 408 (420)
Q Consensus 337 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~g~~i~p~i~G~l~d~~g----~~~~~~~-~~~~~~~~~-~~~~~~ 408 (420)
+....+|.-+.+..|.. |...+..++.. ..+.+-+.+-....+...+..+ +...-+. ...+.+... ...+.-
T Consensus 372 ~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~ 451 (480)
T KOG2563 372 FGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRP 451 (480)
T ss_pred HHCCCCCCCEEEEEEECCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 63378885346653542456776661267763467899999999987305688787765146759999987999763005
Q ss_pred HHHHHCCCC
Q ss_conf 311102012
Q gi|254780843|r 409 CYKENNFEQ 417 (420)
Q Consensus 409 ~~~~~~~~~ 417 (420)
.+|+.|.|+
T Consensus 452 ~y~R~~~e~ 460 (480)
T KOG2563 452 DYRRLRAEA 460 (480)
T ss_pred HHHHHHHHH
T ss_conf 677676650
No 91
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.81 E-value=1.6e-17 Score=104.19 Aligned_cols=365 Identities=12% Similarity=-0.010 Sum_probs=214.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH-HHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98999999999999999999999999985262899999-99976432100000013202467899988777567888765
Q gi|254780843|r 44 TYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICT-GLLIMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVA 122 (420)
Q Consensus 44 s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~-~~~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~ 122 (420)
+.+-.|...++..+-.++.+|..|..+|+.|+||.... ...+..+...+..+.+.....+.......+..++.......
T Consensus 56 ~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vf 135 (438)
T COG2270 56 STAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVF 135 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHEE
T ss_conf 25599999899999999999886466515787205889999999999999998089865999999999998730023300
Q ss_pred HHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC--CCCHHH--------HHHHHHHHHHHHHHHHHHCCC
Q ss_conf 3100001230357887766443110000345478888864123--420467--------765555577898886420011
Q gi|254780843|r 123 LNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGN--LASPNT--------SMLADTMKDYQTDTARVISQM 192 (420)
Q Consensus 123 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~--~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 192 (420)
..++..+..++++-++..+.......+|+.+.-...-...... ...... .............++.....+
T Consensus 136 yds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iP 215 (438)
T COG2270 136 YDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALP 215 (438)
T ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 66676540575655740233501364322099999999996065446057762367555643215778999999999808
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
Q ss_conf 21100134555543210123101233210001111222111111100011100013556778999987542012221012
Q gi|254780843|r 193 YLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYVGAEVAIGSIMANYLMRHDTLHLDGI 272 (420)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (420)
...... .... ...+.++.....-++...+.++..+++...........+.-...........|.. ..++.+..
T Consensus 216 m~~~v~-~~~~----~~~~~~~~l~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~--~~~gls~~ 288 (438)
T COG2270 216 MILNVH-DAEK----ISSPPPTALRNGFKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGA--ADLGLSST 288 (438)
T ss_pred HHHCCC-CCCC----CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHCCCCHH
T ss_conf 885166-5122----4565417899999999999999962464499999999998239999999999988--87281288
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Q ss_conf 46888999987643100111111000000000124555545676899622336899999-99999999999999999996
Q gi|254780843|r 273 SAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYTTGFISGWSL-IAVGLFNSIMFPTIFSLASA 351 (420)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~ 351 (420)
+...+..........+....+++++|++.+++............+...+.......+.. .++|.+.+...+..-++..+
T Consensus 289 ~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~ 368 (438)
T COG2270 289 ELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLAR 368 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf 99999999999999888999999977088426048999999999999975660999999999998402188888999998
Q ss_pred HHHHHH-HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 301565-69-99999999999999999999999961237-9999999999999999998531110201
Q gi|254780843|r 352 SLEDQA-SG-GSGIICTTISGGVIIPLGVGYLVDIASLR-DAMFVPAVCYIIIAIYGIYCCYKENNFE 416 (420)
Q Consensus 352 ~~~~~~-~~-~~~~~~~~~~g~~i~p~i~G~l~d~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (420)
..|+.. +. .+.+...+......+|.+.+.+.|.+|-. .++....+ +..+.+..+...+..++.|
T Consensus 369 lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~v-ll~iGl~~L~~v~~~~~~~ 435 (438)
T COG2270 369 LVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIV-LLLIGLLLLLRVKVPGRRE 435 (438)
T ss_pred HCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH-HHHHHHHHEEEECCCCCCC
T ss_conf 689852131310254411389999999999999871540128999999-9986176279603788765
No 92
>PRK12382 hypothetical protein; Provisional
Probab=99.81 E-value=7.5e-18 Score=105.77 Aligned_cols=150 Identities=17% Similarity=0.081 Sum_probs=128.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCCCC
Q ss_conf 99999987389989999998099989999999999999999999999999852628999999997643210000001320
Q gi|254780843|r 21 FLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATIEIT 100 (420)
Q Consensus 21 f~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~~~ 100 (420)
.+.+.....+...+|...+|.+++ +.|+..+.+.....+.+++.|++.||+|++|++..++++.+++.+....+ +
T Consensus 226 ~l~~~~~~~i~~f~~ly~~~~~~~--~~g~~~~~~~~~~~l~r~~~G~l~Dr~G~~~v~~~gl~l~a~gl~~l~~~---~ 300 (393)
T PRK12382 226 ALQGVGFAVIGTFVSLYFASKGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLA---P 300 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH---C
T ss_conf 999999999999999999873606--89999999999999999998289887085388999999999999999986---2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf 246789998877756788876531000012303578877664431100003454788888641234204677655
Q gi|254780843|r 101 TFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSMLA 175 (420)
Q Consensus 101 ~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~ 175 (420)
+.+.+....++.|+|.+...|+..+++.+..|+++|+++++.++.....|..+||.+.+.+.+..+....+....
T Consensus 301 ~~~~ll~~~~l~G~G~g~~~P~l~al~~~~~~~~~rG~a~g~~~~~~dlG~~~Gp~~~G~va~~~G~~~~F~~~a 375 (393)
T PRK12382 301 TAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGA 375 (393)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 099999999999999988788899999975893310379999999999999999999999999749389999999
No 93
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.80 E-value=1.2e-16 Score=99.72 Aligned_cols=371 Identities=12% Similarity=0.055 Sum_probs=212.6
Q ss_pred CCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH-HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HCHH
Q ss_conf 531120059999999-9999999998738998-999999809998999999999999999999999999985----2628
Q gi|254780843|r 3 DTIARNIQCTKIYIF-ILFFLFGGITSLNSIL-VPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQR----YGYI 76 (420)
Q Consensus 3 ~~~~k~~~~~~i~i~-~~ff~~g~~~~~~~~~-~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr----~Grr 76 (420)
++.++|.+.+...-+ .--+..++.....+.. +-...+.+|+|...+|.+..+-=+--++..|..|.++|| +||+
T Consensus 3 ~~~~~kLs~~eki~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~Grf 82 (467)
T COG2211 3 NSSSKKLSLKEKIGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRF 82 (467)
T ss_pred CCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCC
T ss_conf 86567544888876152045788999999999999996115875899999999999999974441126530455656461
Q ss_pred -HHHHHHHHHHHHHHHCCHHCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC-HHHHHHHHHHHHHHCCCHH
Q ss_conf -9999999976432100000013---2024678999887775678887653100001230-3578877664431100003
Q gi|254780843|r 77 -KGICTGLLIMSLGCILFTATIE---ITTFKVFLIALCILAIGVVIIQVALNPFISLLGD-PNTAVSRLTFAQFFNSLGT 151 (420)
Q Consensus 77 -~~l~~~~~~~~i~~ll~~~a~~---~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~ 151 (420)
+-++.+.+..++.+.++..++. ..+.....+...+.+.+.........++..+..+ ++||.+..+..+.+...|.
T Consensus 83 RP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~ 162 (467)
T COG2211 83 RPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGG 162 (467)
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEECCHHHCCHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 18999886799999999980888455642489999999999999831172531464433998887889989999998999
Q ss_pred HHHHHHHHHHHHCCCCCHH--HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHH-HHHCCCCCCC
Q ss_conf 4547888886412342046--776555557789888642001121100134555543210123101233-2100011112
Q gi|254780843|r 152 AIFPYIGSVLMLGNLASPN--TSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHK-RNHISFLKTL 228 (420)
Q Consensus 152 ~~g~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 228 (420)
.+.......+......... .+.................... ... ++..+..+.++ ..........
T Consensus 163 ~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~----------~v~--ER~~~~~~~~~~~~~~~~~~~~ 230 (467)
T COG2211 163 LLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFF----------NVK--ERVVETQPTKTGVKLKLKDSFL 230 (467)
T ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH----------HHH--CCCCCCCCCCCCCCCCHHHHHH
T ss_conf 9999999999988089851040999999999999999999998----------750--5667666676533443888999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHH
Q ss_conf 22111111100011100013556778999987542012221012468889999876431001111110000000001245
Q gi|254780843|r 229 DILANPRFTMGAVCIFLYVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAF 308 (420)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
...+|+..........+..............|.. ...+.+...............+.+......+.+|++++++....
T Consensus 231 ~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~--y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~ 308 (467)
T COG2211 231 LIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVT--YVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIG 308 (467)
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEE--EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_conf 9972646999999999999999998565221588--87587188999999999999999998689999995629999999
Q ss_pred HHHHHHHHHHHHHCCHH-H--HHHHHHHHHHHHHHHHHHHHHHHHHHHH--H------HHHHHHHHH-HHHHHHHHHHHH
Q ss_conf 55545676899622336-8--9999999999999999999999996301--5------656999999-999999999999
Q gi|254780843|r 309 ATTACSLVILSSYTTGF-I--SGWSLIAVGLFNSIMFPTIFSLASASLE--D------QASGGSGII-CTTISGGVIIPL 376 (420)
Q Consensus 309 ~~~~~~~~~~~~~~~~~-~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~------~~~~~~~~~-~~~~~g~~i~p~ 376 (420)
..+..+......+.... . ..+...+.+++.+...+..+++..|..+ + +.+...+.+ ...-+|.+++..
T Consensus 309 ~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~ 388 (467)
T COG2211 309 LLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGF 388 (467)
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999899851676168999999999986632244328872241448888727870246789999999999999999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999996123
Q gi|254780843|r 377 GVGYLVDIASL 387 (420)
Q Consensus 377 i~G~l~d~~g~ 387 (420)
+.|++.+..||
T Consensus 389 ~~g~~L~~~Gy 399 (467)
T COG2211 389 IPGWILGAIGY 399 (467)
T ss_pred HHHHHHHHCCC
T ss_conf 99999997287
No 94
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.79 E-value=4.2e-17 Score=102.03 Aligned_cols=166 Identities=16% Similarity=0.055 Sum_probs=126.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
Q ss_conf 59999999999999999873899899999980999899999999999999999999999998526289999999976432
Q gi|254780843|r 10 QCTKIYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLG 89 (420)
Q Consensus 10 ~~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~ 89 (420)
....+.+...+|............+|.+.++.|.|..+.+++.+.+.++..++.+..|+++||+|||+.+........++
T Consensus 219 ~~~~~~l~~~~~~~~~~~~~~~~wlP~~l~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~ 298 (406)
T PRK11551 219 ATATLLLWISYFFTLIVLYFLLNWLPSLLIAQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPSRVVLGMYAGILAS 298 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999985998889999999999999999999999998836399999999999999
Q ss_pred HHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCH
Q ss_conf 10000001320246789998877756788876531000012303578877664431100003454788888641234204
Q gi|254780843|r 90 CILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASP 169 (420)
Q Consensus 90 ~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~ 169 (420)
....... +++..+....++.|.......+....+..|.+|.+.|+..++..+....+|..++|.+.+.+++...++.
T Consensus 299 l~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~rgt~~G~~~~~g~lG~~igP~~~G~ll~~~g~~~ 375 (406)
T PRK11551 299 LAALAAA---PGFAGMALAGFAAGLFVVGGQSVLYALAPLFYPTQMRGTGVGAAVAVGRLGSMAGPLAAGQLLALGRSTA 375 (406)
T ss_pred HHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
T ss_conf 9999998---7799999999999999999999999999987859899999999999999999999999999998118899
Q ss_pred HHHHHHHHH
Q ss_conf 677655555
Q gi|254780843|r 170 NTSMLADTM 178 (420)
Q Consensus 170 ~~~~~~~~~ 178 (420)
.........
T Consensus 376 ~~~~~~~~~ 384 (406)
T PRK11551 376 GVIGASIPV 384 (406)
T ss_pred HHHHHHHHH
T ss_conf 999999999
No 95
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.79 E-value=7.4e-17 Score=100.79 Aligned_cols=141 Identities=19% Similarity=0.072 Sum_probs=114.7
Q ss_pred HHHHHHH-HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHH
Q ss_conf 8998999-999809998999999999999999999999999985262899999999764321000000132024678999
Q gi|254780843|r 30 NSILVPK-LQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATIEITTFKVFLIA 108 (420)
Q Consensus 30 ~~~~~p~-l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~~~~~~~~~~~ 108 (420)
....+|. ++++.|.+..+.........++..++.+..|+++||+|||+.+.++.+...+..+.... ...++.+.+...
T Consensus 287 ~~~~lPt~L~~~~g~~~~~~~~~~~~~~lg~~vG~l~~g~L~DriGrr~~~~~~~l~~~~~~~~l~~-~~~~~~~~l~~l 365 (486)
T PRK03893 287 IQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFA-IGGANVWVLGLL 365 (486)
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH-HCCCHHHHHHHH
T ss_conf 9999999999751888889999999999999999999999998948589999999999999999999-756469999999
Q ss_pred HHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHH
Q ss_conf 887775678887653100001230357887766443110000345478888864123420467
Q gi|254780843|r 109 LCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNT 171 (420)
Q Consensus 109 ~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~ 171 (420)
.++.+..........+.+..|.+|.+-|+..+++......+|.+++|.+++.+.+........
T Consensus 366 ~f~~~~~~~G~~~~~~~y~~E~yPT~vRaTG~G~a~~vGRlG~ii~P~i~g~L~~~~~lg~~~ 428 (486)
T PRK03893 366 LFFQQMLGQGIAGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLGLGTAL 428 (486)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
T ss_conf 999999999999999999887488969889999999999999999999999998708951899
No 96
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.78 E-value=6.3e-17 Score=101.15 Aligned_cols=152 Identities=15% Similarity=0.033 Sum_probs=126.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCCC
Q ss_conf 99999998738998999999809998999999999999999999999999985262899999999764321000000132
Q gi|254780843|r 20 FFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATIEI 99 (420)
Q Consensus 20 ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~~ 99 (420)
.++..+....+.+.+|...++.|+++. ++..+.+..+..+.+++.|++.||+|+++++..+.++.+++.++...+
T Consensus 227 ~~l~~~~~~~i~~f~~ly~~~~g~~~~--~~~~~~~~~~~~~~r~~~g~l~dr~g~~~~i~~~~~l~~~~l~ll~~~--- 301 (395)
T PRK05122 227 LALASIGFGTIATFITLYYAARGWDGA--ALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLAVEILGLLLLWLA--- 301 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHH--HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH---
T ss_conf 999999999999999999988273136--999999999999999983278786064489999999999999999987---
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf 02467899988777567888765310000123035788776644311000034547888886412342046776555
Q gi|254780843|r 100 TTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSMLAD 176 (420)
Q Consensus 100 ~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~ 176 (420)
++.+.+....++.|+|.+...|+.++.+.+..|+++|+..++.++.....|..+||.+.+.+.+..+..........
T Consensus 302 ~~~~~ll~a~~l~G~G~g~~~P~l~a~~~~~~p~~~rG~a~g~~~~~~dlG~~iG~~l~G~la~~~G~~~~f~~~a~ 378 (395)
T PRK05122 302 PSPWVALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFFDLSLGITGPLAGLVASWFGYPSIFLFAAL 378 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 20999999999999999888899999998649872457999999999999999999999999997383689999999
No 97
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.78 E-value=5.2e-17 Score=101.58 Aligned_cols=152 Identities=13% Similarity=0.065 Sum_probs=123.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999987389989999998099989----99999999999999999999999985262899999999764321000
Q gi|254780843|r 18 ILFFLFGGITSLNSILVPKLQNSFSLTYL----QAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILF 93 (420)
Q Consensus 18 ~~ff~~g~~~~~~~~~~p~l~~~~~~s~~----~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~ 93 (420)
...++..+......+.+|...+|++.+.. ..|++.+...++..+.++..|+++||+|+|+++..+.++..++.+..
T Consensus 224 ~~~~~~~~~~~~~~~~l~~y~~~~~~~~~~~~~~~g~~~~~~gi~~~l~~~~~G~l~dr~g~~~~~~~~~~~~~~~l~~l 303 (406)
T PRK09874 224 VTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIISVLLLIPM 303 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999836544499999999999999999999999999987383999999999999999999
Q ss_pred HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHH
Q ss_conf 0001320246789998877756788876531000012303578877664431100003454788888641234204677
Q gi|254780843|r 94 TATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTS 172 (420)
Q Consensus 94 ~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~ 172 (420)
.+ .++.+.+.+..++.|.+.+...|...+.+.+..++++|++.++..+....+|..+||.+++.+.+..+....+.
T Consensus 304 ~~---~~~~~~l~i~~~l~G~g~g~~~P~~~~~~~~~~~~~~~G~~~g~~~~~~~lG~~~GPll~G~l~~~~G~~~~f~ 379 (406)
T PRK09874 304 SF---VQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFL 379 (406)
T ss_pred HH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_conf 99---97599999999999999999999999999875888477799999999999999999999999999748599999
No 98
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.78 E-value=3.8e-17 Score=102.23 Aligned_cols=147 Identities=13% Similarity=0.100 Sum_probs=109.3
Q ss_pred HHHHHHHHHHH-HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCCCCHHH
Q ss_conf 99873899899-99998099989999999999999999999999999852628999999997643210000001320246
Q gi|254780843|r 25 GITSLNSILVP-KLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATIEITTFK 103 (420)
Q Consensus 25 ~~~~~~~~~~p-~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~~~~~~ 103 (420)
..+.+....+| ++++.+|.+..+.-++.....+++.+..+..|+++||+|||++++++.+...+...-.....+.++.+
T Consensus 264 ~~~Y~~~~y~ptyl~~~l~~s~~~~~~~~~~~~v~~~~~~pl~G~LSDriGRr~vli~g~i~~~vl~~P~f~ll~~~~~~ 343 (490)
T PRK10642 264 VTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIG 343 (490)
T ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH
T ss_conf 99999999999999980299877899999999999999999999999882648999999999999999999998479699
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHH
Q ss_conf 78999887775678887653100001230357887766443110000345478888864123420467
Q gi|254780843|r 104 VFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNT 171 (420)
Q Consensus 104 ~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~ 171 (420)
.......+.++..+.......++..|.+|.+.|...+++.+-....-.-..|.+..+++...++....
T Consensus 344 ~i~~~~~il~~~~~~~~g~~~a~l~ElFPt~vR~TG~~~~Ynl~~~~gG~tP~I~t~Li~~Tg~~~~p 411 (490)
T PRK10642 344 LIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLIAGLTPTLAAWLVESSQNLMMP 411 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
T ss_conf 99999999999999998899999998688706779887999999999989999999999987997089
No 99
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.78 E-value=2.8e-15 Score=92.90 Aligned_cols=154 Identities=16% Similarity=0.211 Sum_probs=123.5
Q ss_pred HHHHHHHHHHHHHHHC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHCCHHCCCCCH
Q ss_conf 8738998999999809----998999999999999999999999999985-26289999999976432100000013202
Q gi|254780843|r 27 TSLNSILVPKLQNSFS----LTYLQAMLVEAIFFSCYFFFSIPAGMFIQR-YGYIKGICTGLLIMSLGCILFTATIEITT 101 (420)
Q Consensus 27 ~~~~~~~~p~l~~~~~----~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr-~Grr~~l~~~~~~~~i~~ll~~~a~~~~~ 101 (420)
+++-.++.-++..+++ .|++++.-+.++|..-.-+..++.|+++|| .|+|+++..|.+++.+|.+..+.++ ..+
T Consensus 38 YGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDrvLG~~~tI~lGail~~iGh~~L~~~~-~~~ 116 (498)
T COG3104 38 YGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISS-VSG 116 (498)
T ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC-CCC
T ss_conf 4159999999998516667858576688999999999998877788888752235779998999999899994654-466
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHH--HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 4678999887775678887653100001230357--88776644311000034547888886412342046776555557
Q gi|254780843|r 102 FKVFLIALCILAIGVVIIQVALNPFISLLGDPNT--AVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSMLADTMK 179 (420)
Q Consensus 102 ~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~--r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~ 179 (420)
...+.+...+.++|.|..-+...+.+.+.+|+++ |....++...+.++|+..+|.+.+.+.....+...+........
T Consensus 117 ~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~ 196 (498)
T COG3104 117 PGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMI 196 (498)
T ss_pred CCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_conf 10899999999836665566678988985599986657775179998504877899999999986068999999999999
Q ss_pred HH
Q ss_conf 78
Q gi|254780843|r 180 DY 181 (420)
Q Consensus 180 ~~ 181 (420)
..
T Consensus 197 ~g 198 (498)
T COG3104 197 IG 198 (498)
T ss_pred HH
T ss_conf 99
No 100
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.78 E-value=9.6e-17 Score=100.24 Aligned_cols=152 Identities=16% Similarity=0.133 Sum_probs=123.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCCC
Q ss_conf 99999998738998999999809998999999999999999999999999985262899999999764321000000132
Q gi|254780843|r 20 FFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATIEI 99 (420)
Q Consensus 20 ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~~ 99 (420)
.+..|+..+..-.+.|...++-|+|..|+++..+.+.+|..+.|.|.|+++||+|||+++..+.....++.+...
T Consensus 209 ~~~~G~~~~~~~sl~Pvy~~~~Gls~~~ia~~~~~~~~Gg~l~Q~PiG~LSDr~dRr~vl~~~~~~~~~~~~~~~----- 283 (381)
T PRK03633 209 CIISGIVLGSLYGLMPLYLNHQGMSNASIGFWMAVLVSAGILGQWPMGRLADRFGRLLVLRVQVFVVILGSIAML----- 283 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH-----
T ss_conf 999999999999888999998499888999999999999999982459998873729999999999999999999-----
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf 024678999887775678887653100001230357887766443110000345478888864123420467765555
Q gi|254780843|r 100 TTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSMLADT 177 (420)
Q Consensus 100 ~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~ 177 (420)
+.+......++.|......++...+...|..++++.....+.....+..|.+.||.+.+...+..+....+......
T Consensus 284 -~~~~~~~~lf~~G~~~~~lY~l~lA~~~d~~~~~~~v~a~a~~~~~~~~Gsi~GP~~ag~~M~~~G~~~lf~~~a~~ 360 (381)
T PRK03633 284 -SQAAMAPALFILGAAGFTLYPVAMAWACEKVEHHQLVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASV 360 (381)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf -88999999999999985479999999866277888999999999999819887289999999985812899999999
No 101
>PTZ00207 hypothetical protein; Provisional
Probab=99.77 E-value=1.6e-16 Score=99.15 Aligned_cols=151 Identities=13% Similarity=0.186 Sum_probs=110.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
Q ss_conf 11200599999999999999998738998999999809998999999999999999999999999985262899999999
Q gi|254780843|r 5 IARNIQCTKIYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLL 84 (420)
Q Consensus 5 ~~k~~~~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~ 84 (420)
++.-.|+..+.......++.-.....+.+.+++|+.|++|..|...+.++-.. .....+|.|.+-|++|+|++++++.+
T Consensus 21 i~e~~Rf~~Lv~g~~~~ic~S~~y~F~l~s~~l~~~y~~sq~dlstIsTvG~v-~gyf~lP~g~lyD~~GP~~~~~i~~~ 99 (591)
T PTZ00207 21 INEPRRFALLVLGAFCSICTSFMYAFNLISGAMQARYNLTQRDLSTITTVGIA-VGYFLLPYSFIYDYLGPRPIFVLSMT 99 (591)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHEEHHHH-HHHHHHCHHHHHCCCCCHHHHHHHHH
T ss_conf 73899999999999999875031103306689998837887651130204343-12564256977502486078999999
Q ss_pred HHHHHHHCCHHCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHH
Q ss_conf 76432100000013---20246789998877756788876531000012303578877664431100003454788
Q gi|254780843|r 85 IMSLGCILFTATIE---ITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYI 157 (420)
Q Consensus 85 ~~~i~~ll~~~a~~---~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 157 (420)
...+|.+++++.-. .+|.+.+.+...+...|.+....+......+.+| ++||...++.-...++|+.+-..+
T Consensus 100 ~~~lG~ll~~L~F~g~I~gsv~~~~vf~ai~~~g~s~fDta~lvT~l~~FP-~~RG~VV~ilKtf~GLGsAIi~~i 174 (591)
T PTZ00207 100 VFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSI 174 (591)
T ss_pred HHHHHHHHHHEEECCEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC-CCCCCEEEEEHHHCCCCHHHHHHH
T ss_conf 999999998800477107851345799999973618877889999998575-456856875312125519999999
No 102
>pfam03209 PUCC PUCC protein. This protein is required for high-level transcription of the PUC operon.
Probab=99.75 E-value=8.1e-15 Score=90.58 Aligned_cols=352 Identities=10% Similarity=0.006 Sum_probs=192.7
Q ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----HH-HHHHHHHHHHHHHHHCCHHCCC-----------
Q ss_conf 999980999899999999999999999999999998526-----28-9999999976432100000013-----------
Q gi|254780843|r 36 KLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYG-----YI-KGICTGLLIMSLGCILFTATIE----------- 98 (420)
Q Consensus 36 ~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G-----rr-~~l~~~~~~~~i~~ll~~~a~~----------- 98 (420)
.+..|+++...-.+.+.+..++-. ...+..|+.+|+.+ || +-+..|....+.+..+..++..
T Consensus 5 VMIvEL~~pA~lv~~lval~~lva-p~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~a~~a~~~l~~~~~~~~~ 83 (402)
T pfam03209 5 VMIVELAVPASLVGIMIALPLLVA-PFRALIGFRSDTHRSALGWKRTPYIWLGTLLQAGGLAIMPFALIVLSGQGEAVGA 83 (402)
T ss_pred HHHHHHCHHHHHHHHHHHHHHHHH-HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 679971227899999999999999-9999975452577666878862678998999999999999999998567422333
Q ss_pred --CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf --202467899988777567888765310000123035788776644311000034547888886412342046776555
Q gi|254780843|r 99 --ITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSMLAD 176 (420)
Q Consensus 99 --~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~ 176 (420)
............+.|.|.+....+..+++.|..++++|++..++.+...-+|.+++..+.+.+.+.....+.......
T Consensus 84 ~~~~g~~~a~laF~l~Glgv~a~~T~~lALlad~t~e~~R~~~v~i~w~Mli~G~ivtA~i~g~lL~~fs~~rLi~v~~~ 163 (402)
T pfam03209 84 PTWAGLILAALAFLLVGLGVHMSQTVGLALATDLADEEDRPKVVGLMYVMLLVGIIVSAITVGWLLADFSPARLIQVIQG 163 (402)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_conf 15999999999999996566275578999998538865669999999999999999999999997564699999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 55778988864200112110013455554321012310123321000111122211111110001110001355677899
Q gi|254780843|r 177 TMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYVGAEVAIGSI 256 (420)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (420)
............+. ..+.+.++....+++++.......+....++.........+.....+......
T Consensus 164 ~a~i~~~l~~~A~w-------------g~E~r~~~~~~~~~~~~~~f~~a~~~~~~~p~ar~F~~fv~l~~la~~mQD~i 230 (402)
T pfam03209 164 VALATMVLNVIALW-------------KQEARRPSRPREEPRPEPSFLEAWLLFVAEPQARRFLFFLGLGTLAFFMQDVL 230 (402)
T ss_pred HHHHHHHHHHHHHH-------------CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999983-------------56667755456777789659999999983987300277999999999842012
Q ss_pred HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC-CCCCHHHCCCHHHHHHHHHHHHHHHHH----HCCHHHHHHHH
Q ss_conf 9987542012221012468889999876431001111-110000000001245555456768996----22336899999
Q gi|254780843|r 257 MANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGT-WILSRFSAEKTLCAFATTACSLVILSS----YTTGFISGWSL 331 (420)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 331 (420)
+-.|-- +.++.+..+..........+...+....+ ...++.++.+.....+........... ..+.+......
T Consensus 231 LEPygg--~VFGmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~~li~a~~~~~~~~l~~~v 308 (402)
T pfam03209 231 LEPYGG--EVFGLTVGETTKLTAFFAGGTLVGFGLAGRVLSRGLDPFRMAGWGCAVGLPAFLALIFSALLGNVALFVAGT 308 (402)
T ss_pred CCCCCH--HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 476402--560778657699999998899999999999986577758899999999999999999987436513899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHH
Q ss_conf 999999999999999999963015-656999999-999999999999999999961---------237999999999999
Q gi|254780843|r 332 IAVGLFNSIMFPTIFSLASASLED-QASGGSGII-CTTISGGVIIPLGVGYLVDIA---------SLRDAMFVPAVCYII 400 (420)
Q Consensus 332 ~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~g~~i~p~i~G~l~d~~---------g~~~~~~~~~~~~~~ 400 (420)
+++|++.+.......+..++..++ +.+..-+.. ........++..+.|.+.|.. +|...|.+-++++.+
T Consensus 309 ~l~G~g~G~f~v~al~~mM~la~~~~aG~~mG~WGaaQA~A~Glg~~~Gg~~~Dl~~~l~~~~~~aY~~VF~lEa~l~~~ 388 (402)
T pfam03209 309 LLIGFGAGLFGHATLTAMMDLAPEERAGTALGAWGAAQATAAGLAILLGGVLRDLVRALAGNPATAYGLVFALEALLLII 388 (402)
T ss_pred HHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf 99997021889999999981688764158987979999999799999999999999986169752789999999999999
Q ss_pred HHH
Q ss_conf 999
Q gi|254780843|r 401 IAI 403 (420)
Q Consensus 401 ~~~ 403 (420)
...
T Consensus 389 a~~ 391 (402)
T pfam03209 389 TIF 391 (402)
T ss_pred HHH
T ss_conf 999
No 103
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.74 E-value=1.2e-15 Score=94.71 Aligned_cols=142 Identities=11% Similarity=-0.068 Sum_probs=102.4
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHH
Q ss_conf 38998999999809998999999999999999999999999985262899999999764321000000132024678999
Q gi|254780843|r 29 LNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATIEITTFKVFLIA 108 (420)
Q Consensus 29 ~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~~~~~~~~~~~ 108 (420)
.+...+|.+.++.|.+..+.+.+.+...++..++.+..|+++||+|||+++.++.++..+.......... .+.......
T Consensus 249 ~~~~~~p~~l~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~DriGRr~~~~~~~i~~~i~~~~~~~~~~-~~~~~~~~~ 327 (426)
T PRK12307 249 PIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQ-DNYLLLGAC 327 (426)
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_conf 9999999999986998999999999999999999999999999987699999999999999999999971-389999999
Q ss_pred HHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHH
Q ss_conf 887775678887653100001230357887766443110000345478888864123420467
Q gi|254780843|r 109 LCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNT 171 (420)
Q Consensus 109 ~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~ 171 (420)
.+...............+..|.+|.+.|+...+..+....++...+|.+.+++.+..+.....
T Consensus 328 ~~~~~~~~~g~~~~~~~~~~ElfPt~vR~tg~G~~~~~grigg~~~P~i~~~L~~~~G~~~a~ 390 (426)
T PRK12307 328 LFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAAL 390 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf 999999999999999999998498989999999999999999999999999999887945899
No 104
>TIGR00882 2A0105 oligosaccharide:H+ symporter; InterPro: IPR000576 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) . The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli .; GO: 0005403 hydrogen:sugar symporter activity, 0006810 transport, 0016020 membrane.
Probab=99.73 E-value=1.4e-15 Score=94.34 Aligned_cols=369 Identities=13% Similarity=0.090 Sum_probs=215.6
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH---HHCCHHC
Q ss_conf 9999998738998999-99980999899999999999999999999999998526289999999976432---1000000
Q gi|254780843|r 21 FLFGGITSLNSILVPK-LQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLG---CILFTAT 96 (420)
Q Consensus 21 f~~g~~~~~~~~~~p~-l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~---~ll~~~a 96 (420)
|++-+..+..=|+.|. ++|..|+|.++.|.+.|+..+...+.+|..|.++||.|-||-+++......+- -.++.+.
T Consensus 12 FlyFfim~~~fpf~piWL~~~~gl~kt~tGi~fs~~sl~si~Fqp~~G~~sDkLGLkK~LlW~is~lLvlfaPFfiyVf~ 91 (397)
T TIGR00882 12 FLYFFIMSAYFPFFPIWLKDVNGLTKTETGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISLLLVLFAPFFIYVFA 91 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999885334778842254777635778888999999876664002012355068999999999986159989867
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHH--HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHH
Q ss_conf 13202467899988777567888765310000123035788--7766443110000345478888864123420467765
Q gi|254780843|r 97 IEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAV--SRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSML 174 (420)
Q Consensus 97 ~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~--~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~ 174 (420)
+..+. =..++....|+-.|....+....+..+.++-.|. -..|..-....+|.+++...+|.+-.-. .....+.
T Consensus 92 PLL~~--Ni~~G~l~Gg~y~G~~f~AG~Ga~eayiEkvsR~~~FEYG~aR~fGc~GwAlcA~~~GIlF~i~--p~~~FWl 167 (397)
T TIGR00882 92 PLLQS--NILVGALVGGLYLGFVFSAGAGAIEAYIEKVSRNSNFEYGKARMFGCVGWALCASIAGILFSID--PSIVFWL 167 (397)
T ss_pred HHHHH--HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHCCEEEECC--CCHHHHH
T ss_conf 79998--9999999869998778732573468889787524798400178887213787765303003006--6414578
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 55557789888642001121100134555543210123101233210001111222111111100011100013556778
Q gi|254780843|r 175 ADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYVGAEVAIG 254 (420)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (420)
............. ...+. .....+-.+.-..++...+.++..+..|.|+.|...+........+....
T Consensus 168 ~S~~a~~l~~ll~-~~k~~-----------~~~~A~V~~a~gAn~~~~~~~~~~~lFr~r~~W~f~lyvvGv~~~YdvFD 235 (397)
T TIGR00882 168 GSGFALILMLLLM-VAKPK-----------SSDSAEVANALGANASAISLKDALELFRQRRLWVFVLYVVGVACVYDVFD 235 (397)
T ss_pred HHHHHHHHHHHHH-HHCCC-----------CCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEEEEEEEEEEEEECCHH
T ss_conf 8999999999997-61699-----------87268999987338000167899997179986578886661000231012
Q ss_pred HH-HHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Q ss_conf 99-99875420-12221012468889999876431001111110000000001245555456768996223368999999
Q gi|254780843|r 255 SI-MANYLMRH-DTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYTTGFISGWSLI 332 (420)
Q Consensus 255 ~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (420)
.. .+.+.... ..........|...+...+.........+...+|.+.+..++....++.+=.+...+.......+.+=
T Consensus 236 QQlFa~Ff~~fF~~~~~Gtr~fGy~tt~ge~lnA~iMf~~P~iiNRiG~KNaLLiag~IM~~RI~gssf~~~~~ev~~lK 315 (397)
T TIGR00882 236 QQLFAVFFKGFFATPQQGTRVFGYVTTAGELLNALIMFCAPLIINRIGAKNALLIAGLIMAVRILGSSFATTAVEVVILK 315 (397)
T ss_pred HHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 10037786554057677627665301288999999998703776166715899999999999999888776699999999
Q ss_pred HHHHHHHHHHHH----HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999----99999963015656999---99999999999999999999996123799999999999999999
Q gi|254780843|r 333 AVGLFNSIMFPT----IFSLASASLEDQASGGS---GIICTTISGGVIIPLGVGYLVDIASLRDAMFVPAVCYIIIAIYG 405 (420)
Q Consensus 333 ~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~---~~~~~~~~g~~i~p~i~G~l~d~~g~~~~~~~~~~~~~~~~~~~ 405 (420)
.+ ...-.|- .+-+.....++|-++.- +.......+..+.+..+|.++|+.|++.+|.+.....+...+++
T Consensus 316 ~L---H~~EvPfllvg~FKYi~~~F~~rLSaTiyLiGF~~~kqla~i~LS~~~G~lyd~~Gfq~~yl~lg~i~l~~t~is 392 (397)
T TIGR00882 316 ML---HALEVPFLLVGAFKYITSVFDKRLSATIYLIGFQFAKQLAAILLSTFAGNLYDRIGFQTAYLVLGCIVLSFTLIS 392 (397)
T ss_pred HH---HHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 98---887626898645541111115522567889999998888899999877767630244799999999999999998
Q ss_pred HHH
Q ss_conf 985
Q gi|254780843|r 406 IYC 408 (420)
Q Consensus 406 ~~~ 408 (420)
++.
T Consensus 393 ~Ft 395 (397)
T TIGR00882 393 VFT 395 (397)
T ss_pred HHH
T ss_conf 762
No 105
>KOG2325 consensus
Probab=99.73 E-value=6.3e-18 Score=106.15 Aligned_cols=161 Identities=20% Similarity=0.147 Sum_probs=124.3
Q ss_pred CCHHHHHHHHHHHHH-HHHHHHHHHHHHHHH-HHHHHHH-HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH-HHH
Q ss_conf 531120059999999-999999999873899-8999999-809998999999999999999999999999985262-899
Q gi|254780843|r 3 DTIARNIQCTKIYIF-ILFFLFGGITSLNSI-LVPKLQN-SFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGY-IKG 78 (420)
Q Consensus 3 ~~~~k~~~~~~i~i~-~~ff~~g~~~~~~~~-~~p~l~~-~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Gr-r~~ 78 (420)
+...|+.+++.+.+. ..-|+.+...++..+ .-|++++ |.+.+.+..|++.++..++.+++++..|.-..|.+. |+.
T Consensus 25 ~~~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~P 104 (488)
T KOG2325 25 PLDERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKP 104 (488)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCC
T ss_conf 54233786285999999999996221488840325443148998732102999998889886011500242356775147
Q ss_pred HHHHHHHHHHHHHCC-HHCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHH
Q ss_conf 999999764321000-0001320-24678999887775678887653100001230357887766443110000345478
Q gi|254780843|r 79 ICTGLLIMSLGCILF-TATIEIT-TFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPY 156 (420)
Q Consensus 79 l~~~~~~~~i~~ll~-~~a~~~~-~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 156 (420)
++.|.++..+|++++ .++...+ .-++++..|++.|+|.+... ....++++....+.|.++++....+..+|..+||.
T Consensus 105 li~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a-~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~ 183 (488)
T KOG2325 105 LIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFA-VLRAYIADASTVEDRPRAFAATSGGFVLGIILGPT 183 (488)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHH-HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 79999999999999999986242307799999997575751199-99999971367210299999851289999998677
Q ss_pred HHHHHHHC
Q ss_conf 88886412
Q gi|254780843|r 157 IGSVLMLG 164 (420)
Q Consensus 157 ~~~~l~~~ 164 (420)
+...+..-
T Consensus 184 ~q~~f~~L 191 (488)
T KOG2325 184 IQLAFTPL 191 (488)
T ss_pred HHHHHHHH
T ss_conf 99987301
No 106
>pfam07690 MFS_1 Major Facilitator Superfamily.
Probab=99.72 E-value=7.2e-16 Score=95.85 Aligned_cols=137 Identities=22% Similarity=0.178 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCC
Q ss_conf 99999999873899899999980999899999999999999999999999998526289999999976432100000013
Q gi|254780843|r 19 LFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATIE 98 (420)
Q Consensus 19 ~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~ 98 (420)
.++...+.........|...+++|.+..+.++..+...++..++++..|++.||+|+|+.+..+.....++.........
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~i~~~~~~~~~~ 288 (345)
T pfam07690 209 ALLLFGFAFFALFTYLPLYQEVLGLSALLAGLLLGLAGLLGAIGRLLLGRLSDRLGRRRRLLLALLLLILAALGLALLSL 288 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999980998899999999999999999999999999907379999999999999999999986
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHH
Q ss_conf 202467899988777567888765310000123035788776644311000034547
Q gi|254780843|r 99 ITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFP 155 (420)
Q Consensus 99 ~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 155 (420)
.++.+......++.|.+.+...+...+++.|..|+++|++.++..+....+|..+||
T Consensus 289 ~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ig~~igP 345 (345)
T pfam07690 289 TESSLWLLVALLLLGFGAGLVFPALNALASDLAPKEERGTASGLYNTAGSLGGALGP 345 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 121999999999999999999999999999878998999999999999999888392
No 107
>KOG2816 consensus
Probab=99.69 E-value=1.1e-14 Score=89.89 Aligned_cols=366 Identities=14% Similarity=0.050 Sum_probs=191.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH-HHHHHHHHH----HHHHHHHHHHHHHHHHHHCHHHHHHHHH
Q ss_conf 05999999999999999987389989999998099989-999999999----9999999999999998526289999999
Q gi|254780843|r 9 IQCTKIYIFILFFLFGGITSLNSILVPKLQNSFSLTYL-QAMLVEAIF----FSCYFFFSIPAGMFIQRYGYIKGICTGL 83 (420)
Q Consensus 9 ~~~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~-~~g~i~s~~----~~~~~i~~~~~G~l~Dr~Grr~~l~~~~ 83 (420)
.+.....++...|.+++.+.......+...+.++-+.. +.+...... .+...+.++..|.++||+|||..+...+
T Consensus 20 ~~~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~iG~lSD~~grk~~L~~~~ 99 (463)
T KOG2816 20 MRHLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPL 99 (463)
T ss_pred CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 11589999999999883772034455554311365554212013211022313678998899888877877789889999
Q ss_pred HHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 97643210000001320246789998877756788876531000012303578877664431100003454788888641
Q gi|254780843|r 84 LIMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLML 163 (420)
Q Consensus 84 ~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 163 (420)
....+..+...+.. +|.+. ...+. .+.+.......++++|....++|...+++.......+..++|..++.+..
T Consensus 100 ~~~~l~~~~~~~~~----~~~~~-~~~l~-G~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~ 173 (463)
T KOG2816 100 FGTILPALCLLFQG----YWFFL-LLGLS-GGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVK 173 (463)
T ss_pred HHHHHHHHHHHHHH----HHHHH-HCCCC-CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
T ss_conf 99987668867878----76554-10355-40578767676675202117899999999999999999899987210566
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 23420467765555577898886420011211001345555432101231012332100011112221111111000111
Q gi|254780843|r 164 GNLASPNTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCI 243 (420)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (420)
................................. ..................+..+......+....+..+......
T Consensus 174 ~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~l~l~~ 249 (463)
T KOG2816 174 FLGIALVFLIAAASGILSLLYMLLFLPESLQEK----ERSDATLRELTPGSLDSSHVADAFQSLTKVGPDRLLLLLLLVA 249 (463)
T ss_pred HCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC----CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHH
T ss_conf 447124558999999999999874155434641----0144433445777655077777787651268773048999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC-CCCCHHHCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 00013556778999987542012221012468889999876431001111-11000000000124555545676899622
Q gi|254780843|r 244 FLYVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGT-WILSRFSAEKTLCAFATTACSLVILSSYT 322 (420)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (420)
............- ..+.......+.+....+.+.+.............. ...+..+.++....+............+.
T Consensus 250 ~~~~~~~~~~~~~-~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~ 328 (463)
T KOG2816 250 FLSSLPEAGGASD-VLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFA 328 (463)
T ss_pred HHHHHHHHCCCCE-EEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 9998787436520-389999610576888899999999899999999999999999743203345777999999999984
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 336899999999999999999999999963015-6569999-99999999999999999999961
Q gi|254780843|r 323 TGFISGWSLIAVGLFNSIMFPTIFSLASASLED-QASGGSG-IICTTISGGVIIPLGVGYLVDIA 385 (420)
Q Consensus 323 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~g~~i~p~i~G~l~d~~ 385 (420)
...+..+.............|...+......++ +++.+-+ +.....+.+.++|.+.+.+...+
T Consensus 329 ~~~w~~~~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~t 393 (463)
T KOG2816 329 TETWMMFAAGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFALT 393 (463)
T ss_pred HCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 03046689889887204307778767875316454633124999999875365799988999998
No 108
>PRK10504 multidrug efflux system protein MdtE; Provisional
Probab=99.66 E-value=1.2e-14 Score=89.73 Aligned_cols=41 Identities=5% Similarity=-0.111 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999985262899999999764
Q gi|254780843|r 47 QAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMS 87 (420)
Q Consensus 47 ~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~ 87 (420)
..++......++..++.+..|.+.|.+|-|.++.+..-+..
T Consensus 135 a~g~~~~~~~~g~~lGP~lGG~l~~~~~WrwiF~invPi~i 175 (471)
T PRK10504 135 AMTFVTLPGQIGPLLGPALGGLLVEYASWHWIFLINIPVGI 175 (471)
T ss_pred HHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHHH
T ss_conf 99999999999988531210010110102359876069999
No 109
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.64 E-value=2e-14 Score=88.63 Aligned_cols=136 Identities=21% Similarity=0.249 Sum_probs=117.5
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHH
Q ss_conf 3899899999980999899999999999999999999999998-526289999999976432100000013202467899
Q gi|254780843|r 29 LNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQ-RYGYIKGICTGLLIMSLGCILFTATIEITTFKVFLI 107 (420)
Q Consensus 29 ~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~D-r~Grr~~l~~~~~~~~i~~ll~~~a~~~~~~~~~~~ 107 (420)
-....+|...+|.+.+..+.+++.+.......+.+.|.....| |++.|+.+..|..+++++....+.+ ++++.+.+
T Consensus 226 q~~~~lpl~~~~~~~~~~~~g~l~~~~~~v~v~lq~pl~~~~~kr~~~~~~l~~G~~l~~~g~~~~~~~---~~~~~~~i 302 (400)
T PRK11646 226 QVMLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMV---SNLQQLFT 302 (400)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHH
T ss_conf 999999999998558789999999999999999999999999985472999999999999999999999---88999999
Q ss_pred HHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 988777567888765310000123035788776644311000034547888886412342
Q gi|254780843|r 108 ALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLA 167 (420)
Q Consensus 108 ~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 167 (420)
...+..+|+....|...+++++..|++.|++.++..+..+.+|..+||.+++++.+....
T Consensus 303 ~~~lftiGe~l~~P~~~s~va~lap~~~rG~y~G~~~~~~~lG~~~Gp~~gG~L~d~~~~ 362 (400)
T PRK11646 303 LICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKA 362 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 999999999999754899999838965432376299999999999889899999955302
No 110
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.63 E-value=1.2e-13 Score=84.75 Aligned_cols=156 Identities=15% Similarity=0.126 Sum_probs=119.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCCC
Q ss_conf 99999998738998999999809998999999999999999999999999985262899999999764321000000132
Q gi|254780843|r 20 FFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATIEI 99 (420)
Q Consensus 20 ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~~ 99 (420)
++..+......+.+-|.+.|..|.|.++++++...+.++..++.+..|+++||+|+|+++..+..+..++.++..+. .
T Consensus 209 ~l~~~~~f~~~tyi~p~L~~~~g~s~~~i~~~l~~~Gig~i~G~~l~Grl~Dr~g~~~~~~~~~~~~~~~ll~l~~~--~ 286 (389)
T PRK10091 209 MFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFF--G 286 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH--H
T ss_conf 99999999999999999998429997799999999999999999999999762274159999999999999999998--8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf 0246789998877756788876531000012303578877664431100003454788888641234204677655555
Q gi|254780843|r 100 TTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSMLADTM 178 (420)
Q Consensus 100 ~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~ 178 (420)
++.+...+..++.+.+.....+..+..+.+..+ +.+....+...+..++|..+|+.+++..++.+.+...........
T Consensus 287 ~~~~~~~v~~~l~~~~~~~~~~~~q~~~~~~a~-~~~~~a~al~~sa~nlGialGs~~GG~~l~~g~g~~~~~~~ga~l 364 (389)
T PRK10091 287 GMKTTSLIFAFICCAGLFALSAPLQILLLQNAK-GGELLGAAGGQIAFNLGSAIGAYCGGLMLTLGLAYNYVALPAALL 364 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
T ss_conf 769999999999999999977999999998788-976689999999999999999999999997699940389999999
No 111
>TIGR00887 2A0109 phosphate:H+ symporter; InterPro: IPR004738 In yeast the high-affinity transporter for external inorganic phosphate is not essential since a constitutive, low-affinity transporter exists. The induction of the yeast protein is depressed by phosphate starvation.; GO: 0005315 inorganic phosphate transmembrane transporter activity, 0006817 phosphate transport, 0016021 integral to membrane.
Probab=99.63 E-value=1.1e-14 Score=89.98 Aligned_cols=398 Identities=11% Similarity=0.029 Sum_probs=219.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-H----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
Q ss_conf 9999999999987389989999998-0----------9998999999999999999999999999985262899999999
Q gi|254780843|r 16 IFILFFLFGGITSLNSILVPKLQNS-F----------SLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLL 84 (420)
Q Consensus 16 i~~~ff~~g~~~~~~~~~~p~l~~~-~----------~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~ 84 (420)
-.+-||+-.+|...++-..+-+..- + ......-+++...-..|..++|+..|+++|++|||++.-.-+.
T Consensus 25 AGvGFFtDsYDlF~isl~t~~lg~vYy~~~~g~~~~g~~p~~~~~~~~~sa~~Gt~~GQL~FG~laD~~GRK~vYG~el~ 104 (557)
T TIGR00887 25 AGVGFFTDSYDLFCISLVTKMLGYVYYGIEKGPGKPGPLPSSVSAAVKVSASIGTLAGQLFFGWLADILGRKRVYGLELI 104 (557)
T ss_pred ECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
T ss_conf 07424533799999999999998761476478887786888612356533443267888876764110143001113445
Q ss_pred HHHHHHHCCHHCCC--CC---HHHHHHHHHHHHHHHHHHHHHHHH--CCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHH
Q ss_conf 76432100000013--20---246789998877756788876531--000012303578877664431100003454788
Q gi|254780843|r 85 IMSLGCILFTATIE--IT---TFKVFLIALCILAIGVVIIQVALN--PFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYI 157 (420)
Q Consensus 85 ~~~i~~ll~~~a~~--~~---~~~~~~~~~~i~g~g~~~~~~~~~--~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 157 (420)
++.+++++..+.+. .+ ....+...|++.|+|.|.-+|... .+.+|....|+||..++...+.++.|...|..+
T Consensus 105 i~i~at~a~~l~~~si~~~~~~~~~~~f~R~~lG~GIGGDYPLSaf~~ItSEfA~~K~RGA~~aaVFAmQGfG~LagaiV 184 (557)
T TIGR00887 105 IMIVATVASALSAGSISSPTSVVATLCFWRVILGVGIGGDYPLSAFQIITSEFATKKWRGAMMAAVFAMQGFGILAGAIV 184 (557)
T ss_pred HHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 78776688650451001036777798656768715877760355887888532253234789999999888879999999
Q ss_pred HHHHHHCCCCCHHHHH------------HHHHHHHHHHHHHHHHCCCC------------CCCH----------------
Q ss_conf 8886412342046776------------55555778988864200112------------1100----------------
Q gi|254780843|r 158 GSVLMLGNLASPNTSM------------LADTMKDYQTDTARVISQMY------------LVLA---------------- 197 (420)
Q Consensus 158 ~~~l~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~------------~~~~---------------- 197 (420)
.-.+....-....... .........-..|+.+...- ..+.
T Consensus 185 al~v~~~F~~~l~~~~~~~~~~g~~rlqfGla~~~a~D~~WR~~~g~GsksyenskalnsAvp~~~~lYfRl~~PEt~RY 264 (557)
T TIGR00887 185 ALIVLAGFKHSLEAAADEASCTGSWRLQFGLACVPAVDYMWRILIGFGSKSYENSKALNSAVPALLALYFRLTIPETPRY 264 (557)
T ss_pred HHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 99999852012366432104314441233234566515412112502653202345565433335675305888877320
Q ss_pred ------HHHHHHHH----HHHCCCCCCHH------HHHHH---------CCCCCCCCCCCCCCCCCCHH-------HHHH
Q ss_conf ------13455554----32101231012------33210---------00111122211111110001-------1100
Q gi|254780843|r 198 ------IILFLATW----LCWMQRNSFAD------HKRNH---------ISFLKTLDILANPRFTMGAV-------CIFL 245 (420)
Q Consensus 198 ------~~~~~~~~----~~~~~~~~~~~------~~~~~---------~~~~~~~~~~~~~~~~~~~~-------~~~~ 245 (420)
........ .....+.++++ .++.. .++.+.....++...|.... ..++
T Consensus 265 t~~V~~~~~~Aa~D~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~d~h~PKas~~df~~~~~~~~~g~~LLGTa~sWF~ 344 (557)
T TIGR00887 265 TADVAKDVEQAASDIEAVLQKKIEAESDEATRINAVEKASTAVETLDNHVPKASWSDFFTHFSKWRHGKLLLGTAVSWFL 344 (557)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 02355327888999998750211255057899999999887530312578888733577777666444456557788999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCHH----------------HHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHH
Q ss_conf 013556778999987542012221012----------------4688899998764310011111100000000012455
Q gi|254780843|r 246 YVGAEVAIGSIMANYLMRHDTLHLDGI----------------SAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFA 309 (420)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
.-..+++....-.. ... ..|++.. ..+. +.....+.+.+.++.....|+.+|+.+-+.+.
T Consensus 345 LDiAFYG~~Ln~~~-IL~--~IGys~~~~~~~nlray~~l~~~AvGn-~iI~laG~vPGYWvtVf~vD~~GRk~IQl~GF 420 (557)
T TIGR00887 345 LDIAFYGVNLNQKV-ILS--AIGYSPTAAKNNNLRAYEELYKTAVGN-LIIALAGTVPGYWVTVFLVDILGRKPIQLMGF 420 (557)
T ss_pred HHHHHHHHHHHHHH-HHH--CCCCCCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHCCCCCEEEEEEECHHHHHHHHHHHH
T ss_conf 99999732144345-651--167887531012589999999988999-99999732787336400100020168874148
Q ss_pred HHHHHHHHHHHHCCHH-------HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHH
Q ss_conf 5545676899622336-------899999999999999--999999999963015656999999--99999999999999
Q gi|254780843|r 310 TTACSLVILSSYTTGF-------ISGWSLIAVGLFNSI--MFPTIFSLASASLEDQASGGSGII--CTTISGGVIIPLGV 378 (420)
Q Consensus 310 ~~~~~~~~~~~~~~~~-------~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~i~p~i~ 378 (420)
.+..+....+...... ...+.+..+..+..- -..+.+-...|.+|.|.+..+-.. .++-+|+.++...+
T Consensus 421 ~ilT~lf~vlg~ay~~~~~~~~riG~~~~yvl~qFF~NFGPN~TTFiVPgEvFPtR~RST~HGiSAA~GK~GAIig~~~f 500 (557)
T TIGR00887 421 IILTVLFIVLGFAYNHLSEHDNRIGLLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKIGAIIGQFAF 500 (557)
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999971345678888742047888999998506888875214076004866451033799998788999999999
Q ss_pred HHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCC
Q ss_conf 9999961-------------2379999999999999999998531-1102012
Q gi|254780843|r 379 GYLVDIA-------------SLRDAMFVPAVCYIIIAIYGIYCCY-KENNFEQ 417 (420)
Q Consensus 379 G~l~d~~-------------g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 417 (420)
..+.|+. +....+.+...|+.+-.++-+.... |+|+.||
T Consensus 501 ~~l~~~~~~~~tD~G~p~~~~~~~vl~i~~~~m~lG~~~TlLiPEtkgk~LEE 553 (557)
T TIGR00887 501 SYLADHGAPTKTDKGYPTGIWVGNVLEIFALFMFLGILFTLLIPETKGKSLEE 553 (557)
T ss_pred HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
T ss_conf 98616787654568888888734399999999988788852055668888684
No 112
>pfam03092 BT1 BT1 family. Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters. One such protein, previously termed (and is still annotated as) ORFG, was shown to encode a biopterin transport protein using null mutants, thus being subsequently renamed BT1. The significant similarity of ORFG/BT1 to Trypanosoma brucei ESAG10 (a putative transmembrane protein and another member of this family) was previously noted. This family also contains five putative Arabidopsis thaliana proteins of unknown function. In addition, it also contains two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.62 E-value=1.2e-12 Score=79.64 Aligned_cols=342 Identities=9% Similarity=-0.001 Sum_probs=172.0
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----CHHHHHHHHHHHHHHHHHCCHHCC-CCCHHHHH
Q ss_conf 989999998099989999999999999999999999999852-----628999999997643210000001-32024678
Q gi|254780843|r 32 ILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRY-----GYIKGICTGLLIMSLGCILFTATI-EITTFKVF 105 (420)
Q Consensus 32 ~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~-----Grr~~l~~~~~~~~i~~ll~~~a~-~~~~~~~~ 105 (420)
...+.+||++++|++|.+.+.+...++. ...++.|.++|.+ .||+=++++.++..++.+..+..+ ...+....
T Consensus 11 a~~~~~kd~~~~spa~~q~~~~i~~lPW-~iKpl~G~lSD~~Pi~GyrRr~Yl~l~~~l~~~~~l~la~~~~~~~s~~~a 89 (425)
T pfam03092 11 STQFMLKDRLGIDPARYQRLSGLATLPW-VIKPFTGVLSDGFALFGYRRRPYLALSGLLGGAFALSYGLLPAKESSAAVA 89 (425)
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHCCH-HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
T ss_conf 8889988531989999999999996628-998889997613201577544999999999999999999823775429999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCHHCCCCHHH--HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf 999887775678887653100001230357--887766443110000345478888864123420467765555577898
Q gi|254780843|r 106 LIALCILAIGVVIIQVALNPFISLLGDPNT--AVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSMLADTMKDYQT 183 (420)
Q Consensus 106 ~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~--r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 183 (420)
.+..++...|.+.......+.+.|...++. ++...+........|..++..+.+.+.+....................
T Consensus 90 ~~~l~l~s~g~a~~DV~~Da~vvE~~r~~~~~~~~lqS~~~~~~~~G~ll~~~lsG~l~~~~~~~~~f~i~~~lpll~~~ 169 (425)
T pfam03092 90 AAFIFLSSLGKALVDVLSDALYSERGRQEPLAGPSLVSWIWGCSAVGGIIGSVLSGPLLDTFKPQISFLVTAALQLLTCV 169 (425)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 99999999999999986546630054207764544000999999999999999999999855842789999999999999
Q ss_pred HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH-
Q ss_conf 8864200112110013455554321012310123321000111122211111110001110001355677899998754-
Q gi|254780843|r 184 DTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYVGAEVAIGSIMANYLM- 262 (420)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 262 (420)
.... ... .+.....++..+......++...+..+..+.+..+......................|..
T Consensus 170 ~~~~-~~e-----------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~p~l~~~~~~~~~~~~~~~~~F~~~t 237 (425)
T pfam03092 170 DAAV-LKE-----------EEVLGLGRPPVPCLLGLNREVISRNWKAFRYPEILAPTLTWISFWAAPLVIAKADMFYYQT 237 (425)
T ss_pred HHHH-CCC-----------CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEE
T ss_conf 9884-012-----------2233446786203326799999999999907699999999999987205667545899984
Q ss_pred -HHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHH-HCCHHHHH----------HH
Q ss_conf -2012221012468889999876431001111110000000001245555456768996-22336899----------99
Q gi|254780843|r 263 -RHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSS-YTTGFISG----------WS 330 (420)
Q Consensus 263 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----------~~ 330 (420)
...+.+++....+............+..+.....++..-|++............+.-. ....+... ..
T Consensus 238 ~~~~gp~F~~~f~g~~~~ig~l~~l~gi~ly~~~l~~~~~R~~~~~t~l~~~~~~l~dlilV~r~N~~~GIpD~~f~lgd 317 (425)
T pfam03092 238 NELGGPNFSYSFYGTVKVIGSIAGLLGVTLYNRFLKKHPYRLTFGVTTVLQVLSGLFDLILVKRWNRYLGISDHVYILGD 317 (425)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEEECCHHCCCCCEEEEEEH
T ss_conf 36788875999997999999999999999999997359899999999999999974230245631030066860798756
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999963015656-99-99999999999999999999999612
Q gi|254780843|r 331 LIAVGLFNSIMFPTIFSLASASLEDQAS-GG-SGIICTTISGGVIIPLGVGYLVDIAS 386 (420)
Q Consensus 331 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~g~~i~p~i~G~l~d~~g 386 (420)
-.+.......-+-....+..+..|+... +. +......++|+.++..+.+.+.+..|
T Consensus 318 ~il~~~i~~l~~mP~lvL~arLCP~G~E~T~yAlL~si~Nlg~~~s~~lG~~l~~~~g 375 (425)
T pfam03092 318 SIILEVLYMLKFMPFLVLLARLCPRGSESTVFALLASIANLGQIVSSSLGALLMEYLG 375 (425)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 7999999999999999999987899708999999999998679999999999999858
No 113
>PRK03545 sugar efflux transporter; Provisional
Probab=99.62 E-value=2.2e-13 Score=83.38 Aligned_cols=139 Identities=14% Similarity=0.013 Sum_probs=111.9
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHH
Q ss_conf 87389989999998099989999999999999999999999999852628999999997643210000001320246789
Q gi|254780843|r 27 TSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATIEITTFKVFL 106 (420)
Q Consensus 27 ~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~~~~~~~~~ 106 (420)
...++.+-|.++|..+.+..+.+++...+.++..+++...|++.||+++|..+....++......+. ...++.+...
T Consensus 222 f~~~~yi~p~l~~~~g~s~~~~~~~l~~~Gia~~~g~~~~grl~dr~~~~~~~~~~~ll~~~~~~l~---~~~~~~~~~~ 298 (390)
T PRK03545 222 FTAYSYIEPFVQNVAGLSANFATALLLLFGGAGIIGSVLFSRLGNRHPSGFLLIAIALLLVCLLLLL---PAANSEWHLS 298 (390)
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH---HHHHHHHHHH
T ss_conf 9999999999987059988899999999999999999999999884210199999999999999999---9887899999
Q ss_pred HHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCH
Q ss_conf 998877756788876531000012303578877664431100003454788888641234204
Q gi|254780843|r 107 IALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASP 169 (420)
Q Consensus 107 ~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~ 169 (420)
+..++.|.+.....+..+..+.+..| ++|+..+++++...++|...|+.+++.+.+..+...
T Consensus 299 ~~~~l~g~~~~~~~~~~q~~~~~~ap-~~~~~a~al~~s~~~lG~~lG~~lgG~~~~~~G~~~ 360 (390)
T PRK03545 299 VLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSS 360 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf 99999999999878999999998788-967899999999999999999999999998227468
No 114
>KOG3626 consensus
Probab=99.61 E-value=2.3e-15 Score=93.32 Aligned_cols=292 Identities=17% Similarity=0.123 Sum_probs=192.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
Q ss_conf 05999999999999999987389989999998099989999999999999999999999999852628999999997643
Q gi|254780843|r 9 IQCTKIYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSL 88 (420)
Q Consensus 9 ~~~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i 88 (420)
.+.-.+......+.-++..+.+...+..+.+.|+++.++.|++.+.+-++..+...+..+..-|.-|-+.+-+|.+++++
T Consensus 95 ~k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~l 174 (735)
T KOG3626 95 IKMFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGL 174 (735)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCEEECCHHHHHH
T ss_conf 44399999999999875444233311213441378877611676402311001247677753346762345506139999
Q ss_pred HHHCCHHCC-----------------------------------------------CCC--HHHHHHHHHHHHHHHHHHH
Q ss_conf 210000001-----------------------------------------------320--2467899988777567888
Q gi|254780843|r 89 GCILFTATI-----------------------------------------------EIT--TFKVFLIALCILAIGVVII 119 (420)
Q Consensus 89 ~~ll~~~a~-----------------------------------------------~~~--~~~~~~~~~~i~g~g~~~~ 119 (420)
+++++.+-. ..+ -+.++....++.|+|....
T Consensus 175 gsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi 254 (735)
T KOG3626 175 GSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPI 254 (735)
T ss_pred HHHHHHCHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999561875485366676551355677320112231577444577777632236677515789999999700677887
Q ss_pred HHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC-------------HHHHHHHHHHHHHHHHHH
Q ss_conf 7653100001230357887766443110000345478888864123420-------------467765555577898886
Q gi|254780843|r 120 QVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLAS-------------PNTSMLADTMKDYQTDTA 186 (420)
Q Consensus 120 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~-------------~~~~~~~~~~~~~~~~~~ 186 (420)
.+...+++.|...+++....+++..+...+|.++|-++++......... |...++...+........
T Consensus 255 ~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~ 334 (735)
T KOG3626 255 FTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLF 334 (735)
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 46877421457564567089999999998604999999999877133446688887888941466888999999999999
Q ss_pred HHHCCCCCCCHHHHHH---HHHHHHCCCCC-------CHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 4200112110013455---55432101231-------0123321000111122211111110001110001355677899
Q gi|254780843|r 187 RVISQMYLVLAIILFL---ATWLCWMQRNS-------FADHKRNHISFLKTLDILANPRFTMGAVCIFLYVGAEVAIGSI 256 (420)
Q Consensus 187 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (420)
..+............. .....+..+.+ ....+..++.....++..+++......+...+......++..+
T Consensus 335 ~a~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tF 414 (735)
T KOG3626 335 SAVPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITF 414 (735)
T ss_pred HHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99899838656863212200233102444566666784222668999999999966954899999999999887568876
Q ss_pred HHHHHHHHCCCCCCHHHHHHHHHH-HHHHHHHHCCCCCCCCCHHHCC
Q ss_conf 998754201222101246888999-9876431001111110000000
Q gi|254780843|r 257 MANYLMRHDTLHLDGISAGQHTAI-YWGSAMIGRFIGTWILSRFSAE 302 (420)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 302 (420)
.+.|...+. +.+...+..+... .......+..+++...+|++..
T Consensus 415 lPKyLE~Qf--g~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~ 459 (735)
T KOG3626 415 LPKYLETQF--GISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLS 459 (735)
T ss_pred HHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf 289999981--887778788864431434354331000233331356
No 115
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.61 E-value=9e-14 Score=85.32 Aligned_cols=139 Identities=13% Similarity=-0.030 Sum_probs=122.3
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHH
Q ss_conf 89989999998099989999999999999999999999999852628999999997643210000001320246789998
Q gi|254780843|r 30 NSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATIEITTFKVFLIAL 109 (420)
Q Consensus 30 ~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~~~~~~~~~~~~ 109 (420)
...++|.+.++++.++.+.|++.++..+|..++++..+++.|+.++++.+..+.....++...++.+ ++++...+..
T Consensus 242 ~~~l~p~~~~~l~~~~~~~G~l~aa~gvG~llG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 318 (416)
T PRK10489 242 VRVLYPALADNWQMSAAQIGLLYAAIPLGAAIGALTSGWLAHSRRPGLLMLLSTLGSFLAIGLFGLM---PMWILGVACL 318 (416)
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHH
T ss_conf 9999999999808987899999999999999999999985245663899999999999999999861---5999999999
Q ss_pred HHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHH
Q ss_conf 87775678887653100001230357887766443110000345478888864123420467
Q gi|254780843|r 110 CILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNT 171 (420)
Q Consensus 110 ~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~ 171 (420)
++.|.+.+.......+++.+..|++.|+|.++........+..+|....+.+.+..+.....
T Consensus 319 ~~~G~~~~~~~v~~~t~iQ~~~P~~~rGRV~s~~~~~~~~~~plG~~~~G~la~~~G~~~~~ 380 (416)
T PRK10489 319 ALFGWLSAISSLLQYTLLQTQTPEAMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASA 380 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999998599998759999999999998998999999999997789999
No 116
>TIGR00883 2A0106 MFS transporter, metabolite:H+ symporter (MHS) family protein; InterPro: IPR004736 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognized and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated . The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified . Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognized MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found . Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 prove to be a characteristic of virtually all of the more than 300 MFS proteins identified. This entry represents the metabolite-H(+) symport (MHS) subfamily of the MFS. Members include citrate-proton symporters , alpha-ketoglutarate permease , shikimate transporters , and the proline/betaine transporter ProP .; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=99.61 E-value=1.3e-13 Score=84.62 Aligned_cols=170 Identities=14% Similarity=0.143 Sum_probs=122.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 753112005999999999999999987389989999998-----------099989999999999999999999999999
Q gi|254780843|r 2 KDTIARNIQCTKIYIFILFFLFGGITSLNSILVPKLQNS-----------FSLTYLQAMLVEAIFFSCYFFFSIPAGMFI 70 (420)
Q Consensus 2 ~~~~~k~~~~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~-----------~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~ 70 (420)
+++..||.|...+.+.+...-....+-+.--...+.++. +|.|+.+.-++..+-.+...+..|..|.|+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~fY~~t~y~~~Y~~~~~~vsEAGYA~GLg~~~~~~~~~~~~~~i~~~~~~P~~G~Ls 295 (413)
T TIGR00883 216 AELLTKHRKAFLLVLGLVIATTTTFYLITTYLPTYLTTTLGVSEAGYALGLGLSANSALLVLMLSLILFFVVIPLSGALS 295 (413)
T ss_pred HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99987222999999999999899999999999998865167514568773268766899999999999999999999997
Q ss_pred HHHCHHHHHHHHHHHHHHHHH--CCHHCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHH-HH
Q ss_conf 852628999999997643210--00000132-024678999887775678887653100001230357887766443-11
Q gi|254780843|r 71 QRYGYIKGICTGLLIMSLGCI--LFTATIEI-TTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQ-FF 146 (420)
Q Consensus 71 Dr~Grr~~l~~~~~~~~i~~l--l~~~a~~~-~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~ 146 (420)
||+|||+++++..+...+... +..+.... .+++..........+-.+.......+...|.+|.+.|....++.. ..
T Consensus 296 DriGRR~~~i~~~~~~~~~~~p~l~~l~~~~y~~~~~~~~~~~~~~~i~~~~~g~~~~~~~ElFPt~vR~~G~~l~y~~A 375 (413)
T TIGR00883 296 DRIGRRRVLIIFTVLAALLAVPLLMALLDSGYSPFTLVFFLLLGLALIGGMYTGPMGSLLPELFPTEVRYTGASLAYNLA 375 (413)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf 55365399999999999999999998741787689999999999999999878769998772334407899887999999
Q ss_pred CCCHHHHHHHHHHHHHHCCCC-CHHH
Q ss_conf 000034547888886412342-0467
Q gi|254780843|r 147 NSLGTAIFPYIGSVLMLGNLA-SPNT 171 (420)
Q Consensus 147 ~~~g~~~g~~~~~~l~~~~~~-~~~~ 171 (420)
..+++..+|.++..+.....+ +...
T Consensus 376 ~~~~GG~aP~iA~~L~~~~~~~~~~~ 401 (413)
T TIGR00883 376 GAIGGGLAPYIAAALVAITGDDLYAI 401 (413)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCHH
T ss_conf 99865689999999997217887438
No 117
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.61 E-value=6e-14 Score=86.22 Aligned_cols=130 Identities=15% Similarity=0.077 Sum_probs=67.1
Q ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CHHHHHHH-HHH--HHHHHHHCCHHCCCCCHHHHHHHHH
Q ss_conf 999998099989999999999999999999999999852--62899999-999--7643210000001320246789998
Q gi|254780843|r 35 PKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRY--GYIKGICT-GLL--IMSLGCILFTATIEITTFKVFLIAL 109 (420)
Q Consensus 35 p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~--Grr~~l~~-~~~--~~~i~~ll~~~a~~~~~~~~~~~~~ 109 (420)
+++.|+.|+|..|.++..+.+.++..++.+..|+++||+ +||..+.. ... +.++..+ ... ...+........
T Consensus 268 ~yL~~~~g~s~~~a~~~~~l~~ig~~iG~l~~G~lSDrl~~~~r~~~~~~~~~~~~~~~~~l--~~~-~~~~~~~~~~~l 344 (434)
T PRK11663 268 LYLSETLGYDLVTANSAVSMFELGGFIGSLVAGWGSDKLFNGNRGPMNLIFAAGIFLSVGSL--WLM-PFASYVMQAACF 344 (434)
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH--HHC-CCCHHHHHHHHH
T ss_conf 88887608889999999999999999999988899998734773189999999999999999--983-631299999999
Q ss_pred HHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 8777567888765310000123035788776644311000034547888886412342
Q gi|254780843|r 110 CILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLA 167 (420)
Q Consensus 110 ~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 167 (420)
+..|...............|..|++.++...++.+....+|..++|.+.+.+.+..++
T Consensus 345 ~~~G~~~~g~~~l~~~~~~~~~~~~~~gta~G~~n~~g~lG~~l~~~~~G~i~~~~gw 402 (434)
T PRK11663 345 FTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALAGYPLAKVLETWHW 402 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 9999999989999999999836821023798998899999999999999999970385
No 118
>TIGR00895 2A0115 MFS transporter, aromatic acid:H+ symporter (AAHS) family; InterPro: IPR004746 Benzoate transport proteins belong to this group. Benzyl alcohol, benzaldehyde, benzoate, and anthranilate are metabolized via catechol, cis,cis-muconate, and the beta-ketoadipate pathway in some bacteria.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=99.61 E-value=7.5e-14 Score=85.74 Aligned_cols=169 Identities=15% Similarity=0.144 Sum_probs=128.7
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH-----CCCHHHHHHH
Q ss_conf 11000111000135567789999875420122210124688899998764310011111100000-----0000124555
Q gi|254780843|r 236 FTMGAVCIFLYVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFS-----AEKTLCAFAT 310 (420)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 310 (420)
....+.......+.......+.... ...+.+.+..+.+.+.+....+...+.+..+...||++ |++++..+..
T Consensus 18 ~~~~~~l~~l~DG~Dl~~~gf~ap~--l~~~w~l~~~~~G~l~S~gL~G~~~Gal~~G~~aDr~GhlGvsR~r~l~~~~l 95 (413)
T TIGR00895 18 AIILSFLIMLVDGLDLAALGFAAPA--LSAEWGLDPVQLGFLLSAGLIGMAFGALFFGPLADRIGHLGVSRKRVLLWSIL 95 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf 9999999999625999999999768--88885889141007899999999987999987878650354139999999999
Q ss_pred HHHHHHHHHHHCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Q ss_conf 545676899622336899999-99999999999999999996301565-6999999999-99999999999999996123
Q gi|254780843|r 311 TACSLVILSSYTTGFISGWSL-IAVGLFNSIMFPTIFSLASASLEDQA-SGGSGIICTT-ISGGVIIPLGVGYLVDIASL 387 (420)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~g~~i~p~i~G~l~d~~g~ 387 (420)
.............+......+ ++.|++.+...|...++..|+.|++. +.+-+.+..+ .+|.+.+..+.+++.-++||
T Consensus 96 lF~~ft~~~a~A~~~~qL~~~R~~AGlGlGg~~pn~~aL~sEY~p~r~R~~~vg~~~~Gy~~G~~~gg~l~~~LiP~~GW 175 (413)
T TIGR00895 96 LFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLIALVSEYAPKRFRGTAVGLMFCGYAIGAAVGGFLAGWLIPAFGW 175 (413)
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999887404799999999985549999999999998435763346688888876789999999998887544407
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q ss_conf 7999999999999999999
Q gi|254780843|r 388 RDAMFVPAVCYIIIAIYGI 406 (420)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~ 406 (420)
|..|++..+.=++.+.+-.
T Consensus 176 r~~F~vGG~~Pl~ll~~l~ 194 (413)
T TIGR00895 176 RSLFYVGGIIPLLLLLLLM 194 (413)
T ss_pred HHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999
No 119
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.59 E-value=8.9e-14 Score=85.36 Aligned_cols=126 Identities=14% Similarity=0.048 Sum_probs=82.2
Q ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCC-CCCHHHHHHHHHHHHHH
Q ss_conf 99998099989999999999999999999999999852628999999997643210000001-32024678999887775
Q gi|254780843|r 36 KLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATI-EITTFKVFLIALCILAI 114 (420)
Q Consensus 36 ~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~-~~~~~~~~~~~~~i~g~ 114 (420)
.+++.+|+|+.|.|+......+++.++++..|++.||+|+|+.+..+..+..++.+...... ...+++...+...+...
T Consensus 220 ~~~~~~gls~~~~gl~~~~~~~~~~~gs~l~grl~~r~g~~~~~~~gl~i~~~~~~~l~~~~~~~~~~~~~~i~~~l~~~ 299 (377)
T PRK11102 220 VYIEIYGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVG 299 (377)
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99998299989999999999999999999999999995889999999999999999999999987779999999999999
Q ss_pred HHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 678887653100001230357887766443110000345478888864
Q gi|254780843|r 115 GVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLM 162 (420)
Q Consensus 115 g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 162 (420)
+.+...+...+...+.+| ++++.+.++...........+..+.+.+.
T Consensus 300 ~~g~~~~~~~a~a~~~~p-~~aG~Asal~g~~~~~~ga~~~~l~~~~~ 346 (377)
T PRK11102 300 CISMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSLAP 346 (377)
T ss_pred HHHHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 999999999999976671-17799999999999999999999999853
No 120
>PRK10054 putative MFS-type transporter YdeE; Provisional
Probab=99.59 E-value=3.4e-13 Score=82.41 Aligned_cols=134 Identities=13% Similarity=0.131 Sum_probs=114.8
Q ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99809998999999999999999999999999985262899999999764321000000132024678999887775678
Q gi|254780843|r 38 QNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATIEITTFKVFLIALCILAIGVV 117 (420)
Q Consensus 38 ~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~ 117 (420)
.++-+.++...+++.+...+.-.+.|++..+..+|+++|+.+.+|.++++++...+.++ .++++.+.+..++..+|+.
T Consensus 236 ~~~~~~~~~~~~~l~~~N~v~Vv~lq~~v~r~~~~~~~~~~l~~G~ll~~~g~~~~~~~--~~~~~~~~i~~~ifTiGE~ 313 (395)
T PRK10054 236 VADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFS--GNNLLFWGMSAAVFTVGEI 313 (395)
T ss_pred HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHH
T ss_conf 81146509899999999999999989999999851681599999999999999999998--7789999999999999999
Q ss_pred HHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHH
Q ss_conf 887653100001230357887766443110000345478888864123420467765
Q gi|254780843|r 118 IIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSML 174 (420)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~ 174 (420)
...|...+.+.+..|+++|++.++.....+ .|..+||.+++.+.+....|..+...
T Consensus 314 i~~P~~~~~v~~laP~~~RG~Y~g~~sl~~-lG~~igP~~gG~ll~~~~~~~~f~~~ 369 (395)
T PRK10054 314 IYAPGEYMLIDNIAPPGMKASYFSAQSLGW-LGAAVNPLVSGVILTTLPPWSLFVIL 369 (395)
T ss_pred HHHCCHHHHHHHHCCCCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_conf 986559999987399340325898999999-99999999999999872666999999
No 121
>PRK03699 hypothetical protein; Provisional
Probab=99.59 E-value=5.1e-13 Score=81.57 Aligned_cols=158 Identities=11% Similarity=0.025 Sum_probs=114.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
Q ss_conf 59999999999999999873899899-99998099989999999999999999999999999852628999999997643
Q gi|254780843|r 10 QCTKIYIFILFFLFGGITSLNSILVP-KLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSL 88 (420)
Q Consensus 10 ~~~~i~i~~~ff~~g~~~~~~~~~~p-~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i 88 (420)
+...+...+.+|.+-......+.-+| .++|+.|++..+++...|.|..+..++.+..|++.||+++|+++.....+..+
T Consensus 204 ~~~~~~~~i~~f~yv~~e~~~~~W~ptyl~~~~g~~~~~A~~~~S~fw~~~~iGrl~~~~l~~r~~~~~~l~~~~~~a~~ 283 (394)
T PRK03699 204 NFGVIFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFILRFFDLQRILTVLAGLALV 283 (394)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 60899999999999999999999999999982799988999999999999999999999999884379999999999999
Q ss_pred HHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
Q ss_conf 21000000132024678999887775678887653100001230357887766443110000345478888864123420
Q gi|254780843|r 89 GCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLAS 168 (420)
Q Consensus 89 ~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~ 168 (420)
...+... .++........+..|+..+...|...+...+..| ++.++..+........|..+.|.+.+.+.+..+-.
T Consensus 284 ~~~~~~~---~~~~~~~~~~~~~~Gff~a~iyp~~~s~~~~~~~-~~~~~~vs~il~~g~~G~~~~P~i~G~i~~~~G~~ 359 (394)
T PRK03699 284 LMYLFVT---TDNPAHMAYLILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLSFVVTGPIVAHFGLQ 359 (394)
T ss_pred HHHHHHH---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999997---5868999999999999997788999999987555-53187999999999899999999999999986289
Q ss_pred HHH
Q ss_conf 467
Q gi|254780843|r 169 PNT 171 (420)
Q Consensus 169 ~~~ 171 (420)
...
T Consensus 360 ~~~ 362 (394)
T PRK03699 360 AAM 362 (394)
T ss_pred HHH
T ss_conf 999
No 122
>pfam05631 DUF791 Protein of unknown function (DUF791). This family consists of several eukaryotic proteins of unknown function.
Probab=99.58 E-value=3.6e-13 Score=82.30 Aligned_cols=117 Identities=15% Similarity=0.205 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
Q ss_conf 20059999999999999999873899899999980999899999999999999999999999998526289999999976
Q gi|254780843|r 7 RNIQCTKIYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIM 86 (420)
Q Consensus 7 k~~~~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~ 86 (420)
++.++..+.+ +.+..+.+++.||.+=.+-+++|.++.|++.+...-+...++.+...|.++||+||||..+.-.++.
T Consensus 33 ~~fq~~yl~V---Y~La~~aDWLQGPY~Y~LY~~yg~~~~~Ia~Lfv~GF~Ss~~fgt~vG~laD~~GRk~~cl~yc~~y 109 (354)
T pfam05631 33 NSFKNNYLLV---YSMMMAGDWLQGPYVYYLYSSYGFSKGDIGILFIAGFGSSMLFGTIVGSLADKQGRKRACLTYCILY 109 (354)
T ss_pred HHHHHHHHHH---HHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf 9999999999---9999998874065539989974998999999999998889999988888887517406799999999
Q ss_pred HHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCC
Q ss_conf 43210000001320246789998877756788876531000012
Q gi|254780843|r 87 SLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLL 130 (420)
Q Consensus 87 ~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~ 130 (420)
+++++. ...+++..+.+.|.+.|++.+....+..++....
T Consensus 110 ~lsClt----k~s~~~~vLllGRvLGGisTSLLFSaFESWlV~E 149 (354)
T pfam05631 110 ILSCIT----KHSPNYKVLMIGRFLGGIATSLLFSAFESWLIAE 149 (354)
T ss_pred HHHHHH----HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999998----8646409999998861289888888899999989
No 123
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.58 E-value=9.1e-14 Score=85.32 Aligned_cols=146 Identities=10% Similarity=-0.021 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH
Q ss_conf 67789999875420122210124688899998764310011111100000000012455554567689962233689999
Q gi|254780843|r 251 VAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYTTGFISGWS 330 (420)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (420)
.....+.|......++++.+........+.+..+...+....+.++||++||++...+..+..+........++....+.
T Consensus 22 la~d~ylPalP~ia~~~~~s~~~vq~tls~f~~g~a~~ql~~GpLSDr~GRk~vll~gl~lf~i~s~~~a~a~si~~ll~ 101 (394)
T PRK11652 22 MAQTIYVPAIADMARDLNVREGALQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALTAHSLTVLIA 101 (394)
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99988986099999996989989999999999999999999999998828869999999999999999998767999999
Q ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9-9999999999999999999630156-5699-999999999999999999999996123799999999
Q gi|254780843|r 331 L-IAVGLFNSIMFPTIFSLASASLEDQ-ASGG-SGIICTTISGGVIIPLGVGYLVDIASLRDAMFVPAV 396 (420)
Q Consensus 331 ~-~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~g~~i~p~i~G~l~d~~g~~~~~~~~~~ 396 (420)
. ++-|++.+...+...+...|..+++ .... +.......++-.++|.+.|++.|..||+..|++..+
T Consensus 102 ~R~lQG~Ga~~~~v~~~AiirD~~~g~~~ak~~s~~~~~~~~~p~laP~iGg~l~~~~gWr~~F~~l~~ 170 (394)
T PRK11652 102 ASAIQGMGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILFSPLLAPLIGGLLTTLFGWRACYLFLLV 170 (394)
T ss_pred HHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 999827665100009999988636899999999998899998510261699999800559999999999
No 124
>TIGR00903 2A0129 major facilitator 4 family protein; InterPro: IPR005277 The MFS is a very old, large and diverse superfamily that includes several hundred sequenced members. They catalyze uniport, solute:cation (H+ or Na+) symport and/or solute:H+ or solute:solute antiport. Most are of 400-600 amino acyl residues in length and possess either 12 or 14 putative transmembrane a-helical spanners. They exhibit specificity for sugars, polyols, drugs, neurotransmitters, Krebs cycle metabolites, phosphorylated glycolytic intermediates, amino acids, peptides, osmolites, nucleosides, organic anions, inorganic anions, etc. They are found ubiquitously in all three kingdoms of living organisms. The generalized transport reactions catalyzed by MFS porters are: (1)Uniport: S (out) S (in). (2)Symport: S (out) + [H+ or Na+] (out) ---> S (in) + [H+ or Na+] (in). (3)Antiport: S1 (out) + S2 (in) S1 (in) + S2 (out), (S1 may be H+ or a solute) This family of proteins are uncharacterised proteins from archaea, which may be major facilitators. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix. .
Probab=99.58 E-value=2.2e-11 Score=73.32 Aligned_cols=308 Identities=13% Similarity=0.087 Sum_probs=190.8
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHH
Q ss_conf 89989999998099989999999999999999999999999852628999999997643210000001320246789998
Q gi|254780843|r 30 NSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATIEITTFKVFLIAL 109 (420)
Q Consensus 30 ~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~~~~~~~~~~~~ 109 (420)
.+|...-..||.|+|..+.|++.-.|...+.+..+|+|.|.||= -|+-+.+|.+........-... .-||.++..++
T Consensus 10 ySPV~~LV~E~~~VS~E~~GLLA~~YP~~FL~LTIPSG~LLDR~-F~~Wl~~G~~~T~~A~~~RL~~--Pl~Y~WLL~CQ 86 (368)
T TIGR00903 10 YSPVLSLVAEDLDVSKELLGLLAVVYPIAFLILTIPSGLLLDRD-FKRWLLVGVLLTFAAAVLRLLD--PLSYEWLLVCQ 86 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHCC--CCHHHHHHHHH
T ss_conf 10035776522344388898999999999999860422443266-7689999999999889987305--00078999999
Q ss_pred HHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 87775678887653100001230357887766443110000345478888864123420467765555577898886420
Q gi|254780843|r 110 CILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSMLADTMKDYQTDTARVI 189 (420)
Q Consensus 110 ~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (420)
.....|+...-.+..++.++..| |||....+.......+|.+.+-.-+..+....+-..................
T Consensus 87 ~~~ALGQPlLLN~F~P~AS~~~~-ERR~~V~S~LSl~MYLG~~yAL~~G~~~YT~~GL~~L~~P~A~V~~A~~~L~---- 161 (368)
T TIGR00903 87 LLAALGQPLLLNAFVPAASTLRE-ERRDLVVSLLSLAMYLGIVYALAAGLKLYTALGLTLLILPIAVVAAASVVLV---- 161 (368)
T ss_pred HHHHHCCHHHHHHHCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----
T ss_conf 99861541577621230013351-3578999999999999999998757999998558999878999988899999----
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 01121100134555543210123101233210001111222111111100011100013556778999987542012221
Q gi|254780843|r 190 SQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYVGAEVAIGSIMANYLMRHDTLHL 269 (420)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (420)
....+.-+.++.+.-..++..++.....+++..|..-...............|+..-... .|.
T Consensus 162 --------------~~~~~A~~~~~~~~lGfkd~V~~F~~~~~R~DLW~~G~ILGlGVA~FDNl~~WL~~AL~~---~GL 224 (368)
T TIGR00903 162 --------------LIALRALRFTKAESLGFKDVVKEFRLLLKRKDLWLLGLILGLGVALFDNLAIWLEAALRS---KGL 224 (368)
T ss_pred --------------HHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---CCC
T ss_conf --------------986311110012346458899987886403238989899976899987899998762071---461
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHH-HHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 0124688899998764310011111100000000012455-554567689962-23368999999999999999999999
Q gi|254780843|r 270 DGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFA-TTACSLVILSSY-TTGFISGWSLIAVGLFNSIMFPTIFS 347 (420)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~ 347 (420)
.... |-..+.......+|-.+.....-|.+-|...+-.. .+.+.......+ .+.......+-+-|+-+=..||.++.
T Consensus 225 ~~~A-G~~VALA~~~GL~GVAVIP~RV~R~~LR~~Y~R~~~~L~A~ly~~LAl~~~~~~~~~l~~~~GL~MLPAY~~IM~ 303 (368)
T TIGR00903 225 EDVA-GDAVALALLLGLVGVAVIPDRVVRVNLRSIYIRAIALLVAVLYLILALELSRLLLFALLGLAGLLMLPAYAVIMD 303 (368)
T ss_pred HHHH-HHHHHHHHHHHHCCEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 1210-249999999824013144873033006899999999999999999998888999999875778886115889998
Q ss_pred HHHHHHHHH-HHHHHHH
Q ss_conf 999630156-5699999
Q gi|254780843|r 348 LASASLEDQ-ASGGSGI 363 (420)
Q Consensus 348 ~~~~~~~~~-~~~~~~~ 363 (420)
+..+..+|+ ++.+++.
T Consensus 304 WI~~y~D~~~~G~A~G~ 320 (368)
T TIGR00903 304 WISKYYDKRLQGKAAGA 320 (368)
T ss_pred HHHHHHCCCCCCCCCCH
T ss_conf 76454064204430215
No 125
>PRK09952 shikimate transporter; Provisional
Probab=99.57 E-value=1.3e-12 Score=79.50 Aligned_cols=126 Identities=14% Similarity=0.160 Sum_probs=42.2
Q ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCH-HCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 998099989999999999999999999999999852628999999997643210000-0013202467899988777567
Q gi|254780843|r 38 QNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFT-ATIEITTFKVFLIALCILAIGV 116 (420)
Q Consensus 38 ~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~-~a~~~~~~~~~~~~~~i~g~g~ 116 (420)
.++++++.++.-.+.........+..+..|+++||+||||+++++.++..+...... .....+..+.......+.++..
T Consensus 278 ~~~l~~~~~~~~~~~~i~~~i~~~~~~~~G~LsDriGRr~~~~~~~l~~~l~~~p~~~~l~~~~~~~~~~~~~~l~~~~~ 357 (438)
T PRK09952 278 TQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAH 357 (438)
T ss_pred HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 98728889999999999999999999999999998363499999999999999999999843868999999999999999
Q ss_pred HHHHHHHHCCHHCCCCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHH
Q ss_conf 8887653100001230357887766443110-0003454788888641
Q gi|254780843|r 117 VIIQVALNPFISLLGDPNTAVSRLTFAQFFN-SLGTAIFPYIGSVLML 163 (420)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~-~~g~~~g~~~~~~l~~ 163 (420)
+.......++..|.+|.+.|....++.+... .+++...|.+...++.
T Consensus 358 ~~~~~~~~~~l~ElFPt~vR~TG~g~~Ynig~~i~Gg~aP~i~~~L~~ 405 (438)
T PRK09952 358 DMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVT 405 (438)
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999889999999868860557689999999999999999999999999
No 126
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.55 E-value=2.5e-12 Score=78.13 Aligned_cols=136 Identities=8% Similarity=-0.031 Sum_probs=81.2
Q ss_pred HHHHH-HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC-HHCCCCCHHHHHHHH
Q ss_conf 99899-9999809998999999999999999999999999985262899999999764321000-000132024678999
Q gi|254780843|r 31 SILVP-KLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILF-TATIEITTFKVFLIA 108 (420)
Q Consensus 31 ~~~~p-~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~-~~a~~~~~~~~~~~~ 108 (420)
....| .++++.+.+..+...+.+.......+..+..|+++||+|||+.++...++..+...-. ....+..+.......
T Consensus 263 ~~~~~t~l~~~~~~~~~~~~~~~~~~~~~~~i~~~l~G~LsDriGRr~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~l 342 (432)
T PRK10406 263 TTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLFGALSDKIGRRTSMLCFGSLATIFTVPILSALQNVSSPYAAFGL 342 (432)
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 99999999875599889999999999999999999999999884732999999999999999999999738759999999
Q ss_pred HHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHCCC
Q ss_conf 8877756788876531000012303578877664431-100003454788888641234
Q gi|254780843|r 109 LCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQF-FNSLGTAIFPYIGSVLMLGNL 166 (420)
Q Consensus 109 ~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~~~ 166 (420)
........+...+....+..|.+|.+.|....++.+. +..+++...|.+..++...+.
T Consensus 343 ~~~~~~~~~~~~~~~~~~~aElFPt~vR~tG~g~~Yni~~~l~GG~aP~Ia~~L~~~g~ 401 (432)
T PRK10406 343 VMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKSIGM 401 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999998789999999868860555588799999999999999999999998499
No 127
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.53 E-value=1.9e-12 Score=78.65 Aligned_cols=124 Identities=10% Similarity=0.026 Sum_probs=71.6
Q ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf 99998099989999999999999999999999999852628999999997643210000001320246789998877756
Q gi|254780843|r 36 KLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATIEITTFKVFLIALCILAIG 115 (420)
Q Consensus 36 ~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g 115 (420)
.++|++|+|+.+.|+.......++.+++...+++.+|+|.|+.+..+..+...+.+....... .+.......+...+
T Consensus 229 i~~~~~gls~~~fg~~f~~~~~~~~~gs~l~~~l~~r~g~~~ll~~g~~l~l~~~~~l~~~~~---~~~~l~~~~l~~~g 305 (392)
T PRK10473 229 LLMEQMGFERGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPS---HAVSLFGFTLICAG 305 (392)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH
T ss_conf 999991898899999999999999999999999999957999999999999999999999888---88999999999999
Q ss_pred HHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 788876531000012303578877664431100003454788888641
Q gi|254780843|r 116 VVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLML 163 (420)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 163 (420)
.+...+...+...+.+ +++++.+.++.......+..+++.+.+.+.+
T Consensus 306 ~~~~~~~~~a~Al~~~-~~~AGtASal~G~~q~~~~al~~~l~~~l~~ 352 (392)
T PRK10473 306 FSVGFGVAMSQALGPF-SLRAGVASSTLGIAQVCGSSLWIWLAAVLGI 352 (392)
T ss_pred HHHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9999999999996657-5141199999999999999999999998678
No 128
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.52 E-value=5.5e-12 Score=76.36 Aligned_cols=139 Identities=24% Similarity=0.281 Sum_probs=112.8
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH-HHHHHHHHHHHHHHCCHHCCCCCHHHHHHHH
Q ss_conf 899899999980999899999999999999999999999998526289-9999999764321000000132024678999
Q gi|254780843|r 30 NSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIK-GICTGLLIMSLGCILFTATIEITTFKVFLIA 108 (420)
Q Consensus 30 ~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~-~l~~~~~~~~i~~ll~~~a~~~~~~~~~~~~ 108 (420)
.....+.++++.+.++.+.+...+...++..++.++.|++.||+|||+ .+..+.....+..+... ..++.+.....
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 271 (352)
T cd06174 195 LTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLA---LAPSLALLLVA 271 (352)
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
T ss_conf 999999999824898777778889999999999999999999827389999999999999999999---88659999999
Q ss_pred HHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHH
Q ss_conf 887775678887653100001230357887766443110000345478888864123420467
Q gi|254780843|r 109 LCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNT 171 (420)
Q Consensus 109 ~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~ 171 (420)
..+.|.+.+...+.....+.+..|+++|++..+........+...+|.+.+.+.+........
T Consensus 272 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~i~g~i~~~~g~~~~~ 334 (352)
T cd06174 272 LLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVF 334 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_conf 999999999999999999999879607999999999999999999999999999987899999
No 129
>pfam11700 ATG22 Vacuole effluxer Atg22 like. Autophagy is a major survival survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxes, which mediate the efflux of leucine and other amino acids resulting from autophagy. This family also includes other transporter proteins.
Probab=99.51 E-value=6.9e-12 Score=75.88 Aligned_cols=48 Identities=17% Similarity=0.215 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999999612379--99999999999999999853
Q gi|254780843|r 362 GIICTTISGGVIIPLGVGYLVDIASLRD--AMFVPAVCYIIIAIYGIYCC 409 (420)
Q Consensus 362 ~~~~~~~~g~~i~p~i~G~l~d~~g~~~--~~~~~~~~~~~~~~~~~~~~ 409 (420)
.......+.+.++..+.|++.|+.|.+. ...+......++.+++++..
T Consensus 321 ~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~~~~~l~~~~~i~l~g~~g~ 370 (477)
T pfam11700 321 VLSITAQLAAVLGAFLWPFLSRRFGLKTKQTLIAIIVLWELIPLYGLLGI 370 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999989498138999999999999999999998
No 130
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter; InterPro: IPR001927 It has been shown that integral membrane proteins that mediate the intake of a wide variety of molecules with the concomitant uptake of sodium ions (sodium symporters) can be grouped, on the basis of sequence and functional similarities into a number of distinct families. This collection of sequences represents the sodium: galactoside symporter family (SGF). Like sugar transport proteins, these integral membrane proteins are predicted to comprise twelve membrane spanning domains. ; GO: 0005215 transporter activity, 0006814 sodium ion transport, 0016020 membrane.
Probab=99.48 E-value=1.8e-10 Score=68.78 Aligned_cols=339 Identities=12% Similarity=0.077 Sum_probs=205.1
Q ss_pred HHHHHHHHHHCCCHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHC---H----HHHHHHHHHHHHHHHHCCHHC
Q ss_conf 989999998099989999--------9999999999999999999998526---2----899999999764321000000
Q gi|254780843|r 32 ILVPKLQNSFSLTYLQAM--------LVEAIFFSCYFFFSIPAGMFIQRYG---Y----IKGICTGLLIMSLGCILFTAT 96 (420)
Q Consensus 32 ~~~p~l~~~~~~s~~~~g--------~i~s~~~~~~~i~~~~~G~l~Dr~G---r----r~~l~~~~~~~~i~~ll~~~a 96 (420)
-++-..-|.+|+|....| .+..+-=+.-++.-|..|.+.||-. | ||-+++|.+..++-++++-..
T Consensus 21 YL~~fyTDv~G~~a~~~G~n~~iLiTtlflV~Ri~dAi~DP~~G~~vD~T~~I~rwGKFRPw~L~Ga~p~~~~~vL~F~~ 100 (470)
T TIGR00792 21 YLLFFYTDVLGLSAAIVGANKLILITTLFLVARILDAITDPIMGLIVDRTRNITRWGKFRPWLLIGAIPFAIVLVLLFTT 100 (470)
T ss_pred HHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHC
T ss_conf 99998862156843112345326789999999999998334675675244588879643300020178999999999824
Q ss_pred CCCC-------HHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC-CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC-
Q ss_conf 1320-------2467899988777567888765310000123-035788776644311000034547888886412342-
Q gi|254780843|r 97 IEIT-------TFKVFLIALCILAIGVVIIQVALNPFISLLG-DPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLA- 167 (420)
Q Consensus 97 ~~~~-------~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~- 167 (420)
.+.. ......+...+.|+..+.......++..... +++||.+..+.......+|..+-..+...+......
T Consensus 101 ~~~~~~~n~~~~~v~a~~tYi~~g~~Ys~~niPy~sl~p~~T~d~~ER~~l~~~r~~~a~~G~~~~~~~~~P~~~~~~~~ 180 (470)
T TIGR00792 101 PDFSATGNPIGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGI 180 (470)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 57554311778999999999998466221013621035432578310021201878999999999999999999860665
Q ss_pred ----CHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC---CCHHH-HHHHCCCCCCCCCCCCCCCCCC
Q ss_conf ----046776555557789888642001121100134555543210123---10123-3210001111222111111100
Q gi|254780843|r 168 ----SPNTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRN---SFADH-KRNHISFLKTLDILANPRFTMG 239 (420)
Q Consensus 168 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 239 (420)
.....+.................. ...-+|+. +.+++ +++..-++..+...+|+.....
T Consensus 181 ~~~~~~~~G~~~~~~i~~~~g~~~~~~c-------------~~~tkE~~~~~~~~~~~~~~~~~~~~~~~l~~N~qL~~l 247 (470)
T TIGR00792 181 SAGEDDKLGWFMFALILALIGVVLLIIC-------------FFGTKERVSVSEIPKKSEKKLSLKKIFKALFKNDQLLIL 247 (470)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHH-------------HCCCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCHHHHH
T ss_conf 4688885058999999999999999987-------------167732131033211356778689999998528889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH-HHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 011100013556778999987542012221012468889999-8764310011111100000000012455554567689
Q gi|254780843|r 240 AVCIFLYVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIY-WGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVIL 318 (420)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (420)
.....+..............|..+. .|. +.....+.... ....+.+....+...+|++|+++...+..+.....++
T Consensus 248 ~~~~l~~~~a~~i~~~~~~YYf~Yv--lg~-~~lf~~~~~~~~~~~~l~~~~l~P~l~k~~grk~~~~~~~~~~~~g~l~ 324 (470)
T TIGR00792 248 CLAYLFYLLAFNIKNGVQVYYFTYV--LGD-PELFSILGLIAFIGAGLIGVLLFPRLVKKFGRKRLFLIGILLMVLGLLI 324 (470)
T ss_pred HHHHHHHHHHHHHHHHHHHEEEEEE--ECC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999998765630234577--466-7899999999999999999987877887612599999999999999999
Q ss_pred HHHCC--HHH--HHHHHHHHHHHHHHHHHHHHHH----HHHHHH--H-----HH-HHH-HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 96223--368--9999999999999999999999----996301--5-----65-699-999999999999999999999
Q gi|254780843|r 319 SSYTT--GFI--SGWSLIAVGLFNSIMFPTIFSL----ASASLE--D-----QA-SGG-SGIICTTISGGVIIPLGVGYL 381 (420)
Q Consensus 319 ~~~~~--~~~--~~~~~~~~g~~~~~~~~~~~~~----~~~~~~--~-----~~-~~~-~~~~~~~~~g~~i~p~i~G~l 381 (420)
..... ... ..+...+.+++.....+..+.+ ..|.++ | |. +.+ |......=+|++++..+.|++
T Consensus 325 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~w~~~vi~~~D~VdYGE~k~G~R~Eg~~~S~~~f~~K~G~A~~g~~~G~~ 404 (470)
T TIGR00792 325 LFFVGKASNLPLILVLIIIAGFGQNFVTGLVWALQVIMVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLI 404 (470)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98731677999999999999887767789878888644202322102014855079999999999999889989999999
Q ss_pred HHHHH
Q ss_conf 99612
Q gi|254780843|r 382 VDIAS 386 (420)
Q Consensus 382 ~d~~g 386 (420)
.+..|
T Consensus 405 L~~~G 409 (470)
T TIGR00792 405 LGIIG 409 (470)
T ss_pred HHHHC
T ss_conf 99727
No 131
>PRK11043 inner membrane transport protein YdhC; Provisional
Probab=99.48 E-value=4.8e-12 Score=76.66 Aligned_cols=127 Identities=11% Similarity=0.006 Sum_probs=70.1
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCC--CCHHHHHHHHHHH
Q ss_conf 99999980999899999999999999999999999998526289999999976432100000013--2024678999887
Q gi|254780843|r 34 VPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATIE--ITTFKVFLIALCI 111 (420)
Q Consensus 34 ~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~--~~~~~~~~~~~~i 111 (420)
.|.+.+++|.|+.+.|+......+++.+++...+++.+|+|.++.+..+..+..++.+....... ..+.+.+.....+
T Consensus 226 spfil~~~G~s~~~fGl~f~~~~l~~i~Gs~l~~rl~~r~g~~~~l~~g~~l~~l~~~~l~~~~~~~~~~~~~l~~~~~l 305 (401)
T PRK11043 226 SPFIMEQMGYSPAVIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIFLAGLLSHVSIVPILIPFCV 305 (401)
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 69999992999999999999999999999999999998808999999999999999999999998704249999999999
Q ss_pred HHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf 77567888765310000123035788776644311000034547888886
Q gi|254780843|r 112 LAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVL 161 (420)
Q Consensus 112 ~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 161 (420)
...+.+...|...+...+-+ +++++.+.++..........+...+.+.+
T Consensus 306 ~~~g~G~i~pn~~a~Al~~f-~~~AGtASaL~G~lQ~~~gal~s~lv~~~ 354 (401)
T PRK11043 306 MAAANGAIYPIVVAQALRPF-PQATGKAAGLQNTLQLGLCFLASLLVSAL 354 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999997348-13060999999999999999999999965
No 132
>TIGR00889 2A0110 nucleoside transporter; InterPro: IPR004740 This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease (NupG) and xanthosine permease (XapB) from Escherichia coli.; GO: 0005337 nucleoside transmembrane transporter activity, 0015858 nucleoside transport, 0016021 integral to membrane.
Probab=99.44 E-value=7.8e-11 Score=70.60 Aligned_cols=383 Identities=13% Similarity=0.069 Sum_probs=203.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999987389989999998099989999999999999999999999999852-62899999999764321
Q gi|254780843|r 12 TKIYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRY-GYIKGICTGLLIMSLGC 90 (420)
Q Consensus 12 ~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~-Grr~~l~~~~~~~~i~~ 90 (420)
..++-++-+|++| .+. -|+=..+.+.++.|..++|++.|+..++..+...+.|.++||+ ..||++.++..+.++
T Consensus 7 L~~msFl~~fiWG--sWl-vtLg~y~~~tl~F~ga~iG~vYss~gIAAi~~P~l~GiiaDkwlsA~~vya~~~~~gA~-- 81 (435)
T TIGR00889 7 LKVMSFLQYFIWG--SWL-VTLGSYLSKTLKFSGAEIGAVYSSTGIAAILMPILLGIIADKWLSAQKVYAVCHLVGAL-- 81 (435)
T ss_pred HHHHHHHHHHHHH--HHH-HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_conf 6799999999876--689-87789986613445542037788778999972789998841565199999999999999--
Q ss_pred HCCHHCCCCCHHHHHHHHHHHHHHHHH----HHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
Q ss_conf 000000132024678999887775678----8876531000012303578877664431100003454788888641234
Q gi|254780843|r 91 ILFTATIEITTFKVFLIALCILAIGVV----IIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNL 166 (420)
Q Consensus 91 ll~~~a~~~~~~~~~~~~~~i~g~g~~----~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 166 (420)
....|+..+++..+.....+.....- ..+......+.+-.-+- .+..--......+|.+.+....+.+.+..+
T Consensus 82 -~lf~AAq~Ttp~~~F~v~L~ns~ayMPTiaL~Nsisy~~l~~AGlD~--~~dFPpIRv~GTiGfI~am~avsllPqiLG 158 (435)
T TIGR00889 82 -LLFFAAQVTTPAGMFLVLLVNSLAYMPTIALTNSISYANLPNAGLDV--VTDFPPIRVMGTIGFIVAMWAVSLLPQILG 158 (435)
T ss_pred -HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC--CCCCCCEEEECCHHHHHHHHHHHHHHHHHH
T ss_conf -99885156888678999999997751478889999998554248854--137887068502789999999975256630
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC-CCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 20467765555577898886420011211001345555432101-23101233210001111222111111100011100
Q gi|254780843|r 167 ASPNTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQ-RNSFADHKRNHISFLKTLDILANPRFTMGAVCIFL 245 (420)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (420)
......................+. ....++.+ .+++.+.+-...--.+.....|+|+..........
T Consensus 159 Ya~~els~~qLyI~ag~SalL~~f------------al~LP~iPVak~~a~~s~~~~LGLDAf~Lfknkr~~iFF~fs~l 226 (435)
T TIGR00889 159 YADLELSNLQLYITAGSSALLGVF------------ALTLPDIPVAKKKAKMSLKVLLGLDAFILFKNKRMAIFFLFSML 226 (435)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHH------------HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 147771303789999999999999------------98478989851003411788876789887508854678999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCC-C----CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 013556778999987542012-2----21012468889999876431001111110000000001245555456768996
Q gi|254780843|r 246 YVGAEVAIGSIMANYLMRHDT-L----HLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSS 320 (420)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (420)
........+.+...|..+... . +.-........+.....-+.-.+....-.+|++.+++++.......+=.....
T Consensus 227 lga~L~i~n~FgN~fL~~~~~~P~FA~SF~vk~asi~ms~sQ~sE~~FiLtiPFFlkRfGIK~V~l~s~Vaw~lRfgfF~ 306 (435)
T TIGR00889 227 LGAELQITNIFGNGFLHEFGKDPEFADSFVVKNASILMSLSQFSEILFILTIPFFLKRFGIKKVLLLSLVAWALRFGFFA 306 (435)
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
T ss_conf 75688876530452101125788620112321328877488999999998522553134478999999999999876503
Q ss_pred HC-CHHHHHHHHHHHHH-HHHHHHH----HHHHHHHHHHHHHHHHH-HHHH--HHHHHHHHHHHHHHHHHHHHH------
Q ss_conf 22-33689999999999-9999999----99999996301565699-9999--999999999999999999961------
Q gi|254780843|r 321 YT-TGFISGWSLIAVGL-FNSIMFP----TIFSLASASLEDQASGG-SGII--CTTISGGVIIPLGVGYLVDIA------ 385 (420)
Q Consensus 321 ~~-~~~~~~~~~~~~g~-~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~--~~~~~g~~i~p~i~G~l~d~~------ 385 (420)
+. ........+.+++. -.|..+- +.+..+.+..+.+-+++ -|.. +...+|..+|..+.|...|..
T Consensus 307 YGsdp~~fg~~LL~Ls~ivyG~afDFfnisgsvfVek~v~~~iRasAQGl~~~~~~GfG~~lG~~lsG~~ve~~~~~geP 386 (435)
T TIGR00889 307 YGSDPEYFGYVLLLLSMIVYGCAFDFFNISGSVFVEKEVPVAIRASAQGLFLLMVNGFGSLLGYILSGVVVEKYFADGEP 386 (435)
T ss_pred ECCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 07898548999999999998654410344578996002786666788899999970177777544563666433127874
Q ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf ------23799999999999999999985311102
Q gi|254780843|r 386 ------SLRDAMFVPAVCYIIIAIYGIYCCYKENN 414 (420)
Q Consensus 386 ------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (420)
+|+..+.+.+.-.+++++......|++++
T Consensus 387 vnGL~~dW~t~Wl~fAgy~~~lAv~Fm~~Fky~~~ 421 (435)
T TIGR00889 387 VNGLVFDWQTVWLVFAGYIVILAVLFMIFFKYSHN 421 (435)
T ss_pred CCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 45414055136789999999999999876302566
No 133
>pfam05977 DUF894 Bacterial protein of unknown function (DUF894). This family consists of several bacterial proteins, many of which are annotated as putative transmembrane transport proteins.
Probab=99.43 E-value=4.5e-11 Score=71.79 Aligned_cols=152 Identities=13% Similarity=-0.013 Sum_probs=127.8
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHC
Q ss_conf 99999999987389989999-99809998999999999999999999999999985262899999999764321000000
Q gi|254780843|r 18 ILFFLFGGITSLNSILVPKL-QNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTAT 96 (420)
Q Consensus 18 ~~ff~~g~~~~~~~~~~p~l-~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a 96 (420)
.+|++++. ....++|.+ ++++|.+....|++.+++-+|..++++..+++-+|+++.+.+..+.+.++++.+..+++
T Consensus 228 ~~~~~~~~---~~~aLLPl~Ar~~l~gga~~yGlLl~~~G~GAv~GAl~l~~lr~~~~~~~lv~~~~~~~a~~~~~la~~ 304 (524)
T pfam05977 228 AAFGLSAS---AVWALLPLVARDLLGGDAGFYGILLGAFGAGAVLGALILSRLRRRLSSERLVLLASVGFALCCLSLALS 304 (524)
T ss_pred HHHHHHHH---HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999999---999999999999837981478999999998899999988987501572438999999999999999965
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf 1320246789998877756788876531000012303578877664431100003454788888641234204677655
Q gi|254780843|r 97 IEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSMLA 175 (420)
Q Consensus 97 ~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~ 175 (420)
++++......++.|.+.-......++.+....|++-|++.++++......|...|..+.+.+.+............
T Consensus 305 ---~~~~l~~~~l~~~G~awi~~lst~n~~vQ~~~P~wvRgR~lslY~~v~~Ggma~Gs~~WG~vA~~~g~~~aL~~aa 380 (524)
T pfam05977 305 ---PSLWVAAIALLLGGACWITALSTLNVAVQLASPRWVVGRALSVYLTVFFGGMAAGSWLWGTVAEALGLTGALLLAA 380 (524)
T ss_pred ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_conf ---1899999999999899999999998999970879999999999999998567888999999873007499999999
No 134
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.43 E-value=4.5e-11 Score=71.79 Aligned_cols=33 Identities=15% Similarity=0.010 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
Q ss_conf 999999999999999999852628999999997
Q gi|254780843|r 53 AIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLI 85 (420)
Q Consensus 53 s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~ 85 (420)
+.....+.+++++++.+....+-|.-=-.++.+
T Consensus 58 g~i~s~~~iG~~iGal~~g~l~Dr~GRk~~l~~ 90 (486)
T PRK10077 58 GFCVASALIGCIIGGALGGYCSSRFGRRDSLKI 90 (486)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_conf 999999999999999999999877455999999
No 135
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily; InterPro: IPR004812 The drug resistance transporter Bcr/CflA proteins are predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in Escherichia coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=99.42 E-value=3e-11 Score=72.72 Aligned_cols=174 Identities=11% Similarity=0.028 Sum_probs=137.6
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCHHH
Q ss_conf 13556778999987542012221012468889999876431001111110000000001245555456768996223368
Q gi|254780843|r 247 VGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYTTGFI 326 (420)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (420)
.........++|.+.....+++.+........+.+..+...+....+..+|+++||.+++.+....++..+.....++..
T Consensus 15 ~L~pl~~DMYLPa~p~i~~~L~~~as~vQ~tLt~yl~G~a~GQL~~GPlSD~~GRrPvlL~G~~~fa~~Sl~~~~~~ni~ 94 (400)
T TIGR00710 15 ILGPLGIDMYLPAFPEIAKDLSVSASLVQLTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLLIFALSSLGLALSNNIE 94 (400)
T ss_pred HHCCCCHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 63202112521207898986287866899999999999999898652333203672388999999999999999985199
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHH-HHH--HHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999-9999999999999999996301-565--6999999999999999999999--999961237999999999999
Q gi|254780843|r 327 SGWSLI-AVGLFNSIMFPTIFSLASASLE-DQA--SGGSGIICTTISGGVIIPLGVG--YLVDIASLRDAMFVPAVCYII 400 (420)
Q Consensus 327 ~~~~~~-~~g~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~g~~i~p~i~G--~l~d~~g~~~~~~~~~~~~~~ 400 (420)
....+- +=+++.+.......++.-|.++ ++. +..+.+...-.+-=+++|.+.| ++.++.+||.-|++......+
T Consensus 95 ~L~~lRF~Qa~gasA~~V~~~AlvRD~Y~G~~e~s~~~s~l~~~~~~~P~~aP~~Ggai~~~~~l~WhaIF~~L~l~~~~ 174 (400)
T TIGR00710 95 TLLVLRFLQAFGASAALVISQALVRDIYPGREELSKIYSILMLVLALAPAVAPLIGGAIYVLVFLSWHAIFAVLSLIGIL 174 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999998999999988850203257899999999999999987888886999999852099999999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCC
Q ss_conf 99999985311102012797
Q gi|254780843|r 401 IAIYGIYCCYKENNFEQNTP 420 (420)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~P 420 (420)
.....++..++.|..||-+|
T Consensus 175 l~a~~f~~~pET~~~~~r~P 194 (400)
T TIGR00710 175 LSALIFFLLPETLPKEKRIP 194 (400)
T ss_pred HHHHHHHHCCCCCCHHCCCC
T ss_conf 99999985512274010374
No 136
>TIGR00902 2A0127 MFS transporter, phenyl propionate permease (PPP) family; InterPro: IPR005276 This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules. .
Probab=99.40 E-value=1.9e-09 Score=63.64 Aligned_cols=361 Identities=12% Similarity=0.035 Sum_probs=215.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC--
Q ss_conf 999999999998738998999999809998999999999999999999999999985262899999999764321000--
Q gi|254780843|r 16 IFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILF-- 93 (420)
Q Consensus 16 i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~-- 93 (420)
+.+-|+-+-+++++.=|+.|..-|.-+.+++.+|++..+-++..+.|+++.....++=.| ++.++=+.++.+.++
T Consensus 9 LAL~yl~Yy~~YG~FLPF~~~WLK~~~~~~E~IGL~~G~~~~~RF~G~Ll~~~~~~~~~~---~I~ALR~LAL~~~~~~~ 85 (388)
T TIGR00902 9 LALSYLTYYFAYGVFLPFFSVWLKSIQLTEETIGLLLGAALVARFLGSLLIASLVKDASR---LIIALRLLALLSLLIAV 85 (388)
T ss_pred HHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH---HHHHHHHHHHHHHHHHH
T ss_conf 999999999874002112566752467663799999999999998768887442044478---99999999999999999
Q ss_pred HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHH
Q ss_conf 00013202467899988777567888765310000123035788776644311000034547888886412342046776
Q gi|254780843|r 94 TATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSM 173 (420)
Q Consensus 94 ~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~ 173 (420)
++....+++|++.+..++.....+...|...++.+.| .++-+...|..-...+...++|..+.|.++...........
T Consensus 86 A~~~~AH~~WLll~~IGly~~~~S~~~P~~D~LA~TW--Q~Q~~LDYGKVRL~GS~AF~~G~~~~G~l~~~~~~~~I~~~ 163 (388)
T TIGR00902 86 AFSLVAHVAWLLLVAIGLYALVFSALVPLTDALASTW--QKQIGLDYGKVRLIGSVAFVLGVVLFGKLVTMVDERVILAL 163 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH--HHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf 9999999999999999988876316785245566535--55338764334466779999888886213533314799999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 55555778988864200112110013455554321012310123321000111122211111110001110001355677
Q gi|254780843|r 174 LADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYVGAEVAI 253 (420)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (420)
+....... ......++.-+++++.++++...........|+|..+....+.....+....+
T Consensus 164 LT~~~~~~-------------------~~~~L~~PTI~P~~~~~~~~~~~~~~~~AL~~nP~~~R~l~~V~L~QG~HAAY 224 (388)
T TIGR00902 164 LTLLLAFY-------------------LLIFLLKPTIQPKDEIREDEVTNDVAFLALLKNPQTLRVLIAVGLLQGAHAAY 224 (388)
T ss_pred HHHHHHHH-------------------HHHHHHCCCCCCCCCCCCCHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99999999-------------------99998468999987776300011366665353660588999998874247999
Q ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
Q ss_conf 89999875420122210124688899998764310011111100000000012455554567689962233689999999
Q gi|254780843|r 254 GSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYTTGFISGWSLIA 333 (420)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (420)
..+...|-.. .|.+..+.+++-+.....-++......++-+|...+.++...+..+..=.......... ..+.+
T Consensus 225 Y~yS~IYW~~---~G~S~S~~~~LW~~GV~AE~~~F~lS~~LF~~~S~~~lL~ISA~~~V~RW~~~G~~~~l---~~~~~ 298 (388)
T TIGR00902 225 YVYSAIYWTA---IGISVSAVSLLWSLGVLAEVVLFALSRKLFRRISIRVLLLISALAGVVRWAVIGAIEDL---PLLIL 298 (388)
T ss_pred HHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHH
T ss_conf 9999999999---84778889899987999999999998889876339999999998888888888788888---99999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH----H-HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999630156----5-69999999999-999999999999999612379999999999999999998
Q gi|254780843|r 334 VGLFNSIMFPTIFSLASASLEDQ----A-SGGSGIICTTI-SGGVIIPLGVGYLVDIASLRDAMFVPAVCYIIIAIYGIY 407 (420)
Q Consensus 334 ~g~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~-~g~~i~p~i~G~l~d~~g~~~~~~~~~~~~~~~~~~~~~ 407 (420)
+-+..+..+....-...++...+ . +.-+.+...+. .--++...+.|.+++..+ +..|+++.+ ++.=++|
T Consensus 299 ~Q~lH~~Ty~VCH~A~~RYI~~~~~S~~~~LQ~~Y~~~~~G~~IAI~T~~AG~~Y~~~~-~~~F~~M~~----~A~~A~F 373 (388)
T TIGR00902 299 LQLLHSLTYAVCHLAIVRYIAARQQSEVIKLQALYSALANGVLIAIFTVIAGFLYQYLG-AGVFVVMAL----VALAAFF 373 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CHHHHHHHH----HHHHHHH
T ss_conf 99998658999999999987438873114788899888500799999999988730056-347789999----9988864
Q ss_pred HHHH
Q ss_conf 5311
Q gi|254780843|r 408 CCYK 411 (420)
Q Consensus 408 ~~~~ 411 (420)
...|
T Consensus 374 ~~P~ 377 (388)
T TIGR00902 374 LIPK 377 (388)
T ss_pred CCCC
T ss_conf 0454
No 137
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.39 E-value=1.5e-12 Score=79.25 Aligned_cols=149 Identities=13% Similarity=0.155 Sum_probs=116.3
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCHHHH-HHHHHHHHHHHHHHHH
Q ss_conf 122210124688899998764310011111100000000012455554567689962233689-9999999999999999
Q gi|254780843|r 265 DTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYTTGFIS-GWSLIAVGLFNSIMFP 343 (420)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~ 343 (420)
...+.+..+.+.+.+.+.+....+....+...||.+++..+........+..++..+.+.... .+...+-|.+.+..+|
T Consensus 57 e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwp 136 (448)
T COG2271 57 EDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWP 136 (448)
T ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 74598989999999999999999888766521467875442587999999999986217999999999998988527983
Q ss_pred HHHHHHHHHHHHHH-HH-HHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999996301565-69-9999999999999999999--99999612379999999999999999998531110
Q gi|254780843|r 344 TIFSLASASLEDQA-SG-GSGIICTTISGGVIIPLGV--GYLVDIASLRDAMFVPAVCYIIIAIYGIYCCYKEN 413 (420)
Q Consensus 344 ~~~~~~~~~~~~~~-~~-~~~~~~~~~~g~~i~p~i~--G~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (420)
........-.+++. ++ .+..+...++|+++.|++. +.+.++.+++.+|++..++.++++++.++..|.+.
T Consensus 137 p~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~P 210 (448)
T COG2271 137 PCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRP 210 (448)
T ss_pred HHHHHHHHHCCCCCCCCEEEEEHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 77868998758545674688745444223505799999999975425656778878999999999999947991
No 138
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.39 E-value=1.1e-10 Score=69.82 Aligned_cols=126 Identities=8% Similarity=0.073 Sum_probs=49.0
Q ss_pred HHHCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHH-CCCCCHHHHHHHHHHHHHHHH
Q ss_conf 9809998999999999999-99999999999998526289999999976432100000-013202467899988777567
Q gi|254780843|r 39 NSFSLTYLQAMLVEAIFFS-CYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTA-TIEITTFKVFLIALCILAIGV 116 (420)
Q Consensus 39 ~~~~~s~~~~g~i~s~~~~-~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~-a~~~~~~~~~~~~~~i~g~g~ 116 (420)
+|.|+|.+|+|.+...+.. +..++...+|.+.+|+|+||.+..+.++..+..+.+.. +...++.+.+.....+.-++.
T Consensus 238 ~dlG~s~~~ig~~~~~~G~~a~i~G~~lGG~l~~r~g~~~~L~~~~~~~~l~~l~~~~la~~~~~~~~l~~~i~~~~~~~ 317 (402)
T PRK11902 238 RGAGFSAGEVGIVNKTLGLAATIVGALAGGSLMVRLGLYRSLMLFGVLQAVSNLGYWLLAVTPKHLWLMGLAIGVENLCG 317 (402)
T ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 75299999999998799999999999999999999738999999999999999999999966775799999999999999
Q ss_pred HHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
Q ss_conf 888765310000123035788776644311000034547888886412
Q gi|254780843|r 117 VIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLG 164 (420)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 164 (420)
+...++..++..+..+++..+...++..+...++.......++.+.+.
T Consensus 318 g~~~~a~~a~~m~l~~~~~~atqyal~~sl~~l~~~~~~~~sG~la~~ 365 (402)
T PRK11902 318 GMGTAAFVALLMALCNRSFSATQYALLSALASVGRVYVGPTSGYLVEA 365 (402)
T ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999982886639999999999999899988439999998
No 139
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.39 E-value=1.5e-11 Score=74.15 Aligned_cols=154 Identities=14% Similarity=0.124 Sum_probs=121.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHH
Q ss_conf 99999999999873899899999980999899999999999999999999999998526289999999976432100000
Q gi|254780843|r 16 IFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTA 95 (420)
Q Consensus 16 i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~ 95 (420)
+.-+++..|.. .++...--.-++++|+|..|..++.-...+..+++++..|+|.||+|.|+++..++++..+.++...+
T Consensus 259 iA~~~~~DGv~-til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~ 337 (438)
T COG2270 259 IARFFYIDGVN-TILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIF 337 (438)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHH
T ss_conf 99999982399-99999999988872812889999999999999988899999997708842604899999999999997
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHH
Q ss_conf 013202467899988777567888765310000123035788776644311000034547888886412342046776
Q gi|254780843|r 96 TIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSM 173 (420)
Q Consensus 96 a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~ 173 (420)
...... +.....+.|...|..+....++..+..|+++.++..+++.......+..||.+.+.+.+.....+....
T Consensus 338 ~~~~~~---f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~ 412 (438)
T COG2270 338 LEGELD---FWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVL 412 (438)
T ss_pred CCCCHH---HHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_conf 566099---999999999840218888899999868985213131025441138999999999999987154012899
No 140
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.37 E-value=7.6e-11 Score=70.68 Aligned_cols=153 Identities=18% Similarity=0.172 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
Q ss_conf 20059999999999999999873899899999980999899999999999999999999999998526289999999976
Q gi|254780843|r 7 RNIQCTKIYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIM 86 (420)
Q Consensus 7 k~~~~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~ 86 (420)
|+.+....++...+++.| .......+-|.++|..|.|.++++++.-.|-++..++....|+++|| +.|+.+.....+.
T Consensus 209 ~~p~v~~~l~~t~l~~~g-~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~ 286 (394)
T COG2814 209 RRPGVLLGLLATFLFMTG-HFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLL 286 (394)
T ss_pred CCCHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCHHHHHHHHHHH
T ss_conf 684589999999999816-24448957999987359987688999999989999987777640202-1066999999999
Q ss_pred HHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
Q ss_conf 432100000013202467899988777567888765310000123035788776644311000034547888886412
Q gi|254780843|r 87 SLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLG 164 (420)
Q Consensus 87 ~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 164 (420)
++..+...+.. ++.+......++.|...............+ ..++.+....+++.+..++|...|..+++.+.+.
T Consensus 287 a~~~l~l~~~~--~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~ 361 (394)
T COG2814 287 ALALLALTFTG--ASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDA 361 (394)
T ss_pred HHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999831--119999999999999863015678887502-4777437999999999999999999998999981
No 141
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.37 E-value=2.6e-10 Score=68.01 Aligned_cols=22 Identities=18% Similarity=0.152 Sum_probs=9.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999630
Q gi|254780843|r 332 IAVGLFNSIMFPTIFSLASASL 353 (420)
Q Consensus 332 ~~~g~~~~~~~~~~~~~~~~~~ 353 (420)
...-...+..++..+....+..
T Consensus 296 ~~~QlLHg~tFg~~~~a~i~~i 317 (383)
T PRK11128 296 ILVQILHCGTFAVCHLAAIRYI 317 (383)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999
No 142
>KOG3762 consensus
Probab=99.35 E-value=9.4e-11 Score=70.21 Aligned_cols=139 Identities=13% Similarity=0.135 Sum_probs=92.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH-HHHHHHHHHHHHHHH
Q ss_conf 2101246888999987643100111111000000000124555545676899622336899999-999999999999999
Q gi|254780843|r 268 HLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYTTGFISGWSL-IAVGLFNSIMFPTIF 346 (420)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~ 346 (420)
+......+........+-+...+...++.++.++.+++..+......-.+......+++....+ .+-|...+.+|.++.
T Consensus 402 ~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~ 481 (618)
T KOG3762 402 GGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAII 481 (618)
T ss_pred CCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCHHEEEHHHHHHHHHHHHHHHHH
T ss_conf 88542532122554123388999999999983661125531567778999999755824111099987899999999999
Q ss_pred HHHHHHHHHHHHHH-HHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Q ss_conf 99996301565699-999999--9999999999999999961237999999999999-999999
Q gi|254780843|r 347 SLASASLEDQASGG-SGIICT--TISGGVIIPLGVGYLVDIASLRDAMFVPAVCYII-IAIYGI 406 (420)
Q Consensus 347 ~~~~~~~~~~~~~~-~~~~~~--~~~g~~i~p~i~G~l~d~~g~~~~~~~~~~~~~~-~~~~~~ 406 (420)
++.....|++..+. .++... ..+|-.+|..+.|.+.+++|.+..|....+.+++ .+++..
T Consensus 482 sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~ 545 (618)
T KOG3762 482 SYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFIS 545 (618)
T ss_pred HHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9998508975238999999887603575356443002211101589999999999999999988
No 143
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.35 E-value=5e-11 Score=71.56 Aligned_cols=91 Identities=11% Similarity=0.056 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHH
Q ss_conf 9999999999999999999999630156569-9-999999999999999999999996----------123799999999
Q gi|254780843|r 329 WSLIAVGLFNSIMFPTIFSLASASLEDQASG-G-SGIICTTISGGVIIPLGVGYLVDI----------ASLRDAMFVPAV 396 (420)
Q Consensus 329 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~g~~i~p~i~G~l~d~----------~g~~~~~~~~~~ 396 (420)
....+..++.-...|+-.+...+..|++-.. . +.......+|+.++..+.+..... ..|...|....+
T Consensus 387 ~~Y~l~tigEL~lSPvGLS~vtklAP~~~~s~mMG~wfls~a~gn~lag~ia~~~~~~~~~~~~~~~~~~y~~~F~~l~~ 466 (500)
T PRK09584 387 ASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVAGLMAVPDNVTDPLMSLEVYGRVFMQIGI 466 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99999999999975899999998785999999999999999999999999999861765555355566689899999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 99999999998531110201279
Q gi|254780843|r 397 CYIIIAIYGIYCCYKENNFEQNT 419 (420)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~ 419 (420)
..+++++..+...++-||.-||+
T Consensus 467 ~~~~~~v~l~~~~p~i~klm~~~ 489 (500)
T PRK09584 467 ATAVIAVLMLLTAPKLHRMTQDD 489 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999999989999970788
No 144
>pfam03825 Nuc_H_symport Nucleoside H+ symporter.
Probab=99.35 E-value=2.4e-10 Score=68.13 Aligned_cols=151 Identities=12% Similarity=0.216 Sum_probs=116.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHC
Q ss_conf 99999999987389989999998099989999999-99999999999999999985262899999999764321000000
Q gi|254780843|r 18 ILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVE-AIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTAT 96 (420)
Q Consensus 18 ~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~-s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a 96 (420)
...|+.....+.+....+..-+|.+-++.+.+... +.-.+.-...-...+++.+|+|.|++++++.+.+++=..+++..
T Consensus 214 ~~~~l~~~~h~~yy~F~s~yl~~~gg~~~~~~~~~~~lgvvaEI~~f~~~~~ll~r~g~~~lll~a~~~~~lR~~l~a~~ 293 (400)
T pfam03825 214 VFSFLLGAILQIYNVFANAFLTNFVGFAVKLASIVLSLGQVAEIIFMLTLPFFLKRFGIKVVMLVGVVAWALRFAFFAYG 293 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999998999999989999998477267799999999999999999999999998489999999999999999999942
Q ss_pred CCCC--HHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHCCCCC
Q ss_conf 1320--2467899988777567888765310000123035788776644311-0000345478888864123420
Q gi|254780843|r 97 IEIT--TFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFF-NSLGTAIFPYIGSVLMLGNLAS 168 (420)
Q Consensus 97 ~~~~--~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~g~~~g~~~~~~l~~~~~~~ 168 (420)
.... .++.+.....+.|+..+....+...++.+..|++.|++..+++... .++|..+|..+++.+.+.....
T Consensus 294 ~~~~~~~~~~l~l~q~LHg~tfg~f~~a~~~~v~~~~p~~~ra~~Q~l~~~~~~G~g~~iG~~~~G~l~~~f~~~ 368 (400)
T pfam03825 294 ADPVPFGVALLLLSMIVHGVAYDFFNITGYIFVDKEVPKDIRASAQGLFNLMINGVGNVLGSILSGMLVGMFTTD 368 (400)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 674037999999999999999999999999999986885538799999999997089999999999999997067
No 145
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.33 E-value=6.9e-10 Score=65.85 Aligned_cols=140 Identities=13% Similarity=0.022 Sum_probs=98.2
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHH
Q ss_conf 98738998999999809998999999999999999999999999985262899999999764321000000132024678
Q gi|254780843|r 26 ITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATIEITTFKVF 105 (420)
Q Consensus 26 ~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~~~~~~~~ 105 (420)
....+..+-|.++|.-|.+..+++++.-.|-++..++....|++.||..|+.+. .......+..+...+. .++.+..
T Consensus 232 ~f~~yTYi~p~l~~~~g~~~~~is~~L~~fGi~~~~Gn~l~G~l~dr~~~~~l~-~~~~~l~~~~~~l~~~--~~~~~~~ 308 (394)
T PRK10213 232 QFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALA-GAPLVLALSALVLTLW--GSDKIVA 308 (394)
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH--HHHHHHH
T ss_conf 999899679999984189864899999999999999999999996310878999-9999999999999998--7459999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCH
Q ss_conf 9998877756788876531000012303578877664431100003454788888641234204
Q gi|254780843|r 106 LIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASP 169 (420)
Q Consensus 106 ~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~ 169 (420)
....++.|.+.+...+..+..+.+..| +.+....+++.+..++|...|..+++..++..+...
T Consensus 309 ~~~~~lwG~~~~~~~~~~q~~i~~~a~-~a~~~a~al~~safnlgia~Ga~iGG~~l~~~G~~~ 371 (394)
T PRK10213 309 TGVAIIWGLTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTS 371 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
T ss_conf 999999999999889999999998786-867699999999999999999999999997657137
No 146
>pfam00083 Sugar_tr Sugar (and other) transporter.
Probab=99.32 E-value=7e-10 Score=65.83 Aligned_cols=15 Identities=20% Similarity=0.328 Sum_probs=6.0
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999999999999
Q gi|254780843|r 368 ISGGVIIPLGVGYLV 382 (420)
Q Consensus 368 ~~g~~i~p~i~G~l~ 382 (420)
.++..+.|.+.....
T Consensus 398 ~v~~~~~~~l~~~~~ 412 (449)
T pfam00083 398 FLIGFLFPIITGAIG 412 (449)
T ss_pred HHHHHHHHHHHHHHH
T ss_conf 999999999999872
No 147
>TIGR00893 2A0114 d-galactonate transporter; InterPro: IPR004744 D-galactonate transporters and other proteins that belong to the phthalate permease family are members of this group.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=99.31 E-value=1.9e-10 Score=68.65 Aligned_cols=147 Identities=18% Similarity=0.221 Sum_probs=86.6
Q ss_pred HHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH-CCCHHHHHHHHHHHHHHHHHHCC-------HHHHHHHHHHH
Q ss_conf 20122210124688899998764310011111100000-00001245555456768996223-------36899999999
Q gi|254780843|r 263 RHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFS-AEKTLCAFATTACSLVILSSYTT-------GFISGWSLIAV 334 (420)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~ 334 (420)
.+++++++..+.++..+.+..+........++..||++ .|++.......-........+.. .......=+++
T Consensus 21 l~~DLg~~~~~~g~~~saF~~gY~~~~~p~g~~Ldr~Gh~~~~~~~~~v~Wg~f~~~~af~~~Fs~~~~~~~l~~lR~l~ 100 (427)
T TIGR00893 21 LQEDLGLSAAQYGYVFSAFSIGYVLGQFPGGLLLDRIGHARKTLAVAIVLWGVFTLLQAFAGGFSTVTAYVSLYILRVLL 100 (427)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 68760887768889999999999999666898875211589999999999999999997556544676899999999998
Q ss_pred HHH--HHHHHHHHHHHHHHHHHHH-HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHH
Q ss_conf 999--9999999999999630156-5699999-99999999999999999999612------379999999999999999
Q gi|254780843|r 335 GLF--NSIMFPTIFSLASASLEDQ-ASGGSGI-ICTTISGGVIIPLGVGYLVDIAS------LRDAMFVPAVCYIIIAIY 404 (420)
Q Consensus 335 g~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~g~~i~p~i~G~l~d~~g------~~~~~~~~~~~~~~~~~~ 404 (420)
|.. .+..+|...-...+-+|++ ++.+.+. +....+|+.+++|+.|++..+.+ |++.|++..+...+..+.
T Consensus 101 G~aGLEa~~~Pg~~~~~~~WFP~~eR~~~~s~f~~~~~lg~~~~~Pl~~~i~~~~~~~g~~gW~~~F~~~G~~~~~~gv~ 180 (427)
T TIGR00893 101 GAAGLEAPLFPGIIKIVASWFPAKERATAVSIFNSAQYLGGIIGGPLVGWILVHFSSMGMKGWQWVFIIEGILGIILGVL 180 (427)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 56567777513689987300465575779999999999999999899999998744665201389999997999999999
Q ss_pred HHHHH
Q ss_conf 99853
Q gi|254780843|r 405 GIYCC 409 (420)
Q Consensus 405 ~~~~~ 409 (420)
.+...
T Consensus 181 ~~~~~ 185 (427)
T TIGR00893 181 WLKFI 185 (427)
T ss_pred HHHHC
T ss_conf 99860
No 148
>TIGR00805 oat sodium-independent organic anion transporter; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced . Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane.
Probab=99.31 E-value=2e-11 Score=73.56 Aligned_cols=160 Identities=16% Similarity=0.160 Sum_probs=132.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
Q ss_conf 31120059999999999999999873899899999980999899999999999999999999999998526289999999
Q gi|254780843|r 4 TIARNIQCTKIYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGL 83 (420)
Q Consensus 4 ~~~k~~~~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~ 83 (420)
.+.++.+...+.......--......++..+..+.++|++|.++.|.+.+.|-+|+.+.-++..+...|..|-+++.+|.
T Consensus 26 ~~~~~~~~~~l~~~~~~~~~~l~~~l~~~~l~~IE~~F~~~~s~~G~I~~~~e~gn~~l~I~vsyFg~~~~~p~~ig~G~ 105 (723)
T TIGR00805 26 SLFSKIKVFVLLLTLAQLQGLLVNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPKVIGIGC 105 (723)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf 76401269999999987625676120011203334310587677763010002301123210556303114689999868
Q ss_pred HHHHHHHHCCHHCC-------------------------------------------------CCCHHHHHHHHHHHHHH
Q ss_conf 97643210000001-------------------------------------------------32024678999887775
Q gi|254780843|r 84 LIMSLGCILFTATI-------------------------------------------------EITTFKVFLIALCILAI 114 (420)
Q Consensus 84 ~~~~i~~ll~~~a~-------------------------------------------------~~~~~~~~~~~~~i~g~ 114 (420)
+.+++|+++..+.. ..-.+..+.+..++.|+
T Consensus 106 ~~~~~G~l~~slPhf~~~~Y~~~~~~~~~~~~S~~~~~~c~~~~~~~L~~~~~~S~~~~~~~~~S~~~~~~~~~~~l~GI 185 (723)
T TIGR00805 106 VIMGLGSLLLSLPHFLSGRYEYSTTVSSTGNLSSANSFLCMENSTQALRPTQDPSECQKEHKETSLMWLLVLVAQLLRGI 185 (723)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHHCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99988799999778747872235212021000243045532576234201034423311222224789999999997414
Q ss_pred HHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 6788876531000012303578877664431100003454788888641
Q gi|254780843|r 115 GVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLML 163 (420)
Q Consensus 115 g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 163 (420)
|.....+...+++.|...+++.+..+++......+|.++|.++++....
T Consensus 186 G~tP~~~lGisy~ddf~~~~~sply~gi~~~~~v~GP~~G~llgS~~~~ 234 (723)
T TIGR00805 186 GETPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQ 234 (723)
T ss_pred CCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8876545676411125664442379999999999889999999877675
No 149
>TIGR00711 efflux_EmrB drug resistance MFS transporter, drug:H+ antiporter-1 (14 Spanner) (DHA2) family; InterPro: IPR004638 This subfamily of drug efflux proteins, a part of the major facilitator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in Escherichia coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.; GO: 0006810 transport, 0016021 integral to membrane.
Probab=99.30 E-value=3.9e-10 Score=67.12 Aligned_cols=132 Identities=20% Similarity=0.156 Sum_probs=114.0
Q ss_pred HHHHH-HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHCHHHHHHHHHHHHHHHHHCCHHC-CCCCHHHHHHHH
Q ss_conf 98999-99980999899999999999999999999999-9985262899999999764321000000-132024678999
Q gi|254780843|r 32 ILVPK-LQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGM-FIQRYGYIKGICTGLLIMSLGCILFTAT-IEITTFKVFLIA 108 (420)
Q Consensus 32 ~~~p~-l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~-l~Dr~Grr~~l~~~~~~~~i~~ll~~~a-~~~~~~~~~~~~ 108 (420)
.++|. +++-.|.+..|+|+...-..+...+.+|++|. +.||+|.|+.+.+|..++++++...... .....|+....-
T Consensus 280 ~LLP~~Lq~~~~~~~~~~Gl~~~P~gl~~~l~sPIaG~~~~~k~~~R~l~~ig~~~~a~~~y~~~~~~~~~~~f~~~~~~ 359 (501)
T TIGR00711 280 YLLPLYLQQVLGYTALQAGLHILPVGLAPLLSSPIAGRMLGDKIDPRLLVTIGLILYAVGFYLRAFTLTPDTDFLAIALP 359 (501)
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
T ss_conf 99999999862799789999998899999997079999984146806899999999999998885221557861888867
Q ss_pred -HHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf -8877756788876531000012303578877664431100003454788888641
Q gi|254780843|r 109 -LCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLML 163 (420)
Q Consensus 109 -~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 163 (420)
.++.|+|.++.........-+--|+++-++..++.+....+|+.+|..+...+..
T Consensus 360 G~~i~G~g~~~~fmP~~~~al~~Lp~~~~~~gs~L~n~~R~~gGSiGTal~t~~~~ 415 (501)
T TIGR00711 360 GQFIRGFGMGCFFMPLTTIALSKLPAEKVARGSSLSNFLRQLGGSIGTALITTILT 415 (501)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 79999999999998755777612523576226899999999888999999999998
No 150
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.30 E-value=2.1e-10 Score=68.49 Aligned_cols=153 Identities=18% Similarity=0.136 Sum_probs=105.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCC--
Q ss_conf 999999873899899999980999899999999999999999999999998526289999999976432100000013--
Q gi|254780843|r 21 FLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATIE-- 98 (420)
Q Consensus 21 f~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~-- 98 (420)
..+|-....-..+--.++++|++|..++|...+.+.+...+..+..|+++||+|.+|++......++++.........
T Consensus 229 ~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~ 308 (417)
T COG2223 229 ATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGF 308 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999999999999999986498723188999987889999985044443313534479999999999999997056344
Q ss_pred --CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHH
Q ss_conf --2024678999887775678887653100001230357887766443110000345478888864123420467765
Q gi|254780843|r 99 --ITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSML 174 (420)
Q Consensus 99 --~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~ 174 (420)
.++...........+...+....+....+...+++ +.+...++..+...+|...-|..-+...+...........
T Consensus 309 ~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~ 385 (417)
T COG2223 309 GHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFML 385 (417)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCHHEEECHHHHHH-HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHH
T ss_conf 6676439999999999999156763003313187786-6467887998854256654048999999842637999999
No 151
>TIGR00900 2A0121 H+ Antiporter protein; InterPro: IPR004751 Drug antiporters which use the proton motive force for the active efflux of the drug .; GO: 0016021 integral to membrane.
Probab=99.30 E-value=1.3e-10 Score=69.56 Aligned_cols=137 Identities=14% Similarity=0.145 Sum_probs=110.6
Q ss_pred HHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHCHHHHHHHHHHHHHHHHHCCHHCCC-CC
Q ss_conf 7389989999998-099989999999999999999999999-----9998526289999999976432100000013-20
Q gi|254780843|r 28 SLNSILVPKLQNS-FSLTYLQAMLVEAIFFSCYFFFSIPAG-----MFIQRYGYIKGICTGLLIMSLGCILFTATIE-IT 100 (420)
Q Consensus 28 ~~~~~~~p~l~~~-~~~s~~~~g~i~s~~~~~~~i~~~~~G-----~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~-~~ 100 (420)
.....+.|.++++ ++.+..|.||+..++..|..++++..| ....|..|...+..+....++......+.+. ..
T Consensus 242 p~~~~l~P~~~~~~~~~~~~~~G~~~~af~~G~l~G~L~~~~~L~~~~~~~~~r~~l~~~a~~~~g~~~~~~~~~~~~~~ 321 (387)
T TIGR00900 242 PIIVVLFPYVTSKYLNRTSVHVGWVLAAFGLGALLGALLLGSILRRLLGRYFKRIALITGAVLVIGLAILVVGLLPPRNS 321 (387)
T ss_pred HHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH
T ss_conf 27887630321444078622567999999999999999999999887611343489999999999999898762389614
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
Q ss_conf 2467899988777567888765310000123035788776644311000034547888886412
Q gi|254780843|r 101 TFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLG 164 (420)
Q Consensus 101 ~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 164 (420)
.|+.+.+..+..|++.+.......++..+..|++.|+|..+..........-++..+.+.+.+.
T Consensus 322 ~~~~~l~~~~~~G~~~~~~~~~~~~~~q~~v~~~~~GRV~~~~~~~~~~a~Plgl~l~G~L~~~ 385 (387)
T TIGR00900 322 GFLLLLVLAFAIGVGVGLINVPIGTLLQRSVPAELLGRVFGLQFSLSSAAGPLGLILAGPLADK 385 (387)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8999999999864203455877887888750078515899999999999999889999988863
No 152
>KOG2504 consensus
Probab=99.30 E-value=1.3e-10 Score=69.46 Aligned_cols=179 Identities=13% Similarity=0.088 Sum_probs=134.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--HHHHHHHH
Q ss_conf 1120059999999999999999873899899999980999899999999999999999999999998526--28999999
Q gi|254780843|r 5 IARNIQCTKIYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYG--YIKGICTG 82 (420)
Q Consensus 5 ~~k~~~~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G--rr~~l~~~ 82 (420)
+-|+..+..+.+...+...++. +-...+|...++.+.++.+.+.+.|+..+...++.+..|+++|+.. ++.+..++
T Consensus 294 ll~~~~fl~~~~~~~~~~~g~~--~p~~~l~~~~~~~g~~~~~~a~l~sii~~~~i~gRi~~G~laD~~~~~~~~~~~~~ 371 (509)
T KOG2504 294 LLKDPKFLLLALSNLFAYLGFN--VPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLT 371 (509)
T ss_pred HHCCHHHHHHHHHHHHHHHHHH--HHHEEEHHHHHHCCCCHHHHHHHHHHHHHHCCCHHEEHHHHCCCCCCHHHHHHHHH
T ss_conf 8615589999999999999876--33444087785559847889999999987512064012655167630157989999
Q ss_pred HHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 99764321000000132024678999887775678887653100001230357887766443110000345478888864
Q gi|254780843|r 83 LLIMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLM 162 (420)
Q Consensus 83 ~~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 162 (420)
++..++.... .+..++++.+.....+.|...+.........+.+....++-..+.++......++...||.+.+.+.
T Consensus 372 l~~~gl~~~~---~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~ 448 (509)
T KOG2504 372 LLIAGLARLF---LPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLY 448 (509)
T ss_pred HHHHHHHHHH---HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999998---8613578999999999985244788756689998639875036999999998999870021341322
Q ss_pred HCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 12342046776555557789888642
Q gi|254780843|r 163 LGNLASPNTSMLADTMKDYQTDTARV 188 (420)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (420)
+....+.................+..
T Consensus 449 d~tg~Y~~~f~~~g~~~~~s~~~~~~ 474 (509)
T KOG2504 449 DITGNYDHAFYFCGLCFLLSAVLLLI 474 (509)
T ss_pred HCCCCEEHHHHHCCHHHHHHHHHHHH
T ss_conf 00477301898705399999999998
No 153
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.30 E-value=1.3e-09 Score=64.40 Aligned_cols=155 Identities=11% Similarity=-0.044 Sum_probs=113.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCCC
Q ss_conf 99999998738998999999809998999999999999999999999999985262899999999764321000000132
Q gi|254780843|r 20 FFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATIEI 99 (420)
Q Consensus 20 ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~~ 99 (420)
|.+....+...-.-+|.+-+|.|.|+.+.|++.+.+.+....+++....++||.+||+.+.....+..++.+.....+.
T Consensus 214 fglqS~~~Y~~~aWLP~il~~~G~s~~~AG~lls~~~~~~~~~~l~~P~la~~~~~~~~l~~~~~~~~ig~~gl~~~p~- 292 (393)
T PRK09705 214 FGLINGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPL- 292 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH-
T ss_conf 9999999999999999999986999999999999999999999999999973467404999999999999999999887-
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC-CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf 02467899988777567888765310000123-03578877664431100003454788888641234204677655555
Q gi|254780843|r 100 TTFKVFLIALCILAIGVVIIQVALNPFISLLG-DPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSMLADTM 178 (420)
Q Consensus 100 ~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~ 178 (420)
+.. .....+.|+|.+...+.....+.+.. ++++.++..+..+........+||.+.+.+-+..++|...+......
T Consensus 293 -~~~--~~~~~l~Gig~G~~F~lal~l~~~rt~~~~~a~~LSg~~Q~vGYllAalgP~~~G~l~d~tg~w~~~~~~l~~~ 369 (393)
T PRK09705 293 -QLP--VLWAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALC 369 (393)
T ss_pred -HHH--HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf -799--99999999987789999999998736998899999999999989999999999999999829958999999999
No 154
>TIGR00890 2A0111 Oxalate/Formate Antiporter; InterPro: IPR004741 Oxalate/formate antiporters and many, as yet, uncharacterised proteins belong to this group.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=99.28 E-value=2.1e-10 Score=68.50 Aligned_cols=158 Identities=14% Similarity=0.044 Sum_probs=112.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999998738998999999809-998999999999999999999999999985262899999999764321
Q gi|254780843|r 12 TKIYIFILFFLFGGITSLNSILVPKLQNSFS-LTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGC 90 (420)
Q Consensus 12 ~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~-~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ 90 (420)
.+..++..|+......-.+.-...+..++|. ++.....+..|++.+...-+.++.|.++||.||.|++.++..+.+++.
T Consensus 243 ~fWvL~~~f~~~a~~~L~~~g~~~~yg~~L~~~~~g~l~~~vs~~~~~Ng~~R~~~G~~sDk~gr~~~m~~~~~isav~~ 322 (429)
T TIGR00890 243 QFWVLYVSFFLAAVSGLLLIGLLKPYGRSLGDLDVGALVLAVSIISLFNGGGRPVLGAVSDKIGRLKTMSIVFGISAVGM 322 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 69999999999888999999999998888888899999999999999998889999999743100556677768999999
Q ss_pred HCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCC-------------CHHHHHHHH
Q ss_conf 0000001320246789998877756788876531000012303578877664431100-------------003454788
Q gi|254780843|r 91 ILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNS-------------LGTAIFPYI 157 (420)
Q Consensus 91 ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~-------------~g~~~g~~~ 157 (420)
+.+.+.....+=..+++..++.+...|.....-+.+.+|.+.+++.++..++.+.+.. +++++|..+
T Consensus 323 ~~~~~~~~~~n~V~FlA~~~~~~ft~Gg~~~lFP~l~s~~FG~~~~~~NYG~~y~A~aGyrireymntfqs~agi~gg~~ 402 (429)
T TIGR00890 323 LAMLFIPKISNDVLFLALVALVAFTWGGTFSLFPSLVSDIFGPKYSAANYGLLYTAKAGYRIREYMNTFQSVAGIFGGLI 402 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99998998742289999999998423013211102210000102214530378763313689999888888999999999
Q ss_pred HHHHHHCCCCCH
Q ss_conf 888641234204
Q gi|254780843|r 158 GSVLMLGNLASP 169 (420)
Q Consensus 158 ~~~l~~~~~~~~ 169 (420)
.+.+....+...
T Consensus 403 ~~~~~~~~G~~~ 414 (429)
T TIGR00890 403 ASLVLTEIGFKV 414 (429)
T ss_pred HHHHHHHHHHHH
T ss_conf 999998884999
No 155
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=99.27 E-value=7.8e-10 Score=65.60 Aligned_cols=146 Identities=24% Similarity=0.276 Sum_probs=114.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHH
Q ss_conf 9999999998738998999999809998--99999999999999999999999998526289999999976432100000
Q gi|254780843|r 18 ILFFLFGGITSLNSILVPKLQNSFSLTY--LQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTA 95 (420)
Q Consensus 18 ~~ff~~g~~~~~~~~~~p~l~~~~~~s~--~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~ 95 (420)
...+...+......+..+.+.++++.+. .+.+++.+.+.++..+++++.|.+.||+|||+.+..+.....++.+....
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~ 88 (338)
T COG0477 9 LAALLLGLDLGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLAL 88 (338)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999998743245799999999999999999999999998834399999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCH-HHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHC
Q ss_conf 01320246789998877756788876531000012303-578877664431-1000034547888886412
Q gi|254780843|r 96 TIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDP-NTAVSRLTFAQF-FNSLGTAIFPYIGSVLMLG 164 (420)
Q Consensus 96 a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~ 164 (420)
... .+.+.+...|...|.+.+...+....++.++.++ ++|+...+.... ....+...++.+++.+...
T Consensus 89 ~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 89 APN-VGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 987-7899999999999999999999999999997561138999999999999999999999999999998
No 156
>pfam01306 LacY_symp LacY proton/sugar symporter. This family is closely related to the sugar transporter family.
Probab=99.27 E-value=8.6e-10 Score=65.38 Aligned_cols=20 Identities=10% Similarity=-0.160 Sum_probs=7.4
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999
Q gi|254780843|r 46 LQAMLVEAIFFSCYFFFSIP 65 (420)
Q Consensus 46 ~~~g~i~s~~~~~~~i~~~~ 65 (420)
.+.+.....|+..+.+..+.
T Consensus 10 ~~ls~~yf~yF~~~g~~~pf 29 (413)
T pfam01306 10 WMFGLFFFFYFFIMSAYFPF 29 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999989
No 157
>PRK10207 inner membrane transporter YhiP; Provisional
Probab=99.27 E-value=2.8e-10 Score=67.82 Aligned_cols=58 Identities=9% Similarity=0.070 Sum_probs=36.7
Q ss_pred HHHHHHCCCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC
Q ss_conf 999980999899999999999----9999999999999985262899999999764321000
Q gi|254780843|r 36 KLQNSFSLTYLQAMLVEAIFF----SCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILF 93 (420)
Q Consensus 36 ~l~~~~~~s~~~~g~i~s~~~----~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~ 93 (420)
.+.+.++-++.+..-..+.|+ +|..++.+..|++.|++|.+..+.++.+.+.++.+.+
T Consensus 129 ~vg~lY~~~d~rrd~~FtiFYmgINiGa~l~~ll~g~l~~~~G~~~~F~~a~igM~igli~f 190 (490)
T PRK10207 129 LLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVY 190 (490)
T ss_pred HHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88860688982020203699999999999999988999988627767777899999999999
No 158
>KOG3098 consensus
Probab=99.25 E-value=3.4e-08 Score=57.36 Aligned_cols=108 Identities=10% Similarity=0.062 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCC
Q ss_conf 99999999999999999999852628999999997643210000001320246789998877756788876531000012
Q gi|254780843|r 51 VEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLL 130 (420)
Q Consensus 51 i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~ 130 (420)
.+++-+..+.+..+.++.+.|+.|+|..+.++...+..-.+.+.. .|-+.++....+.|+|.+..+.....++.+.
T Consensus 55 ~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~----~N~y~~yfssallG~Gaallw~GqG~ylt~~ 130 (461)
T KOG3098 55 GQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF----PNSYYLYFSSALLGFGAALLWTGQGGYLTSN 130 (461)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----CCHHHHHHHHHHHHHHHHHEECCCCEEHHHC
T ss_conf 999999999999981588998860799999986899998877874----0519999988985314876552552443114
Q ss_pred CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 30357887766443110000345478888864
Q gi|254780843|r 131 GDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLM 162 (420)
Q Consensus 131 ~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 162 (420)
..+++..+..++..+....+...|........
T Consensus 131 st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~ 162 (461)
T KOG3098 131 STRETIERNISIFWAIGQSSLIIGGIILFIYF 162 (461)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
T ss_conf 87666878799999999988985127540246
No 159
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.24 E-value=3.9e-09 Score=62.09 Aligned_cols=24 Identities=4% Similarity=0.155 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 999999999999853111020127
Q gi|254780843|r 395 AVCYIIIAIYGIYCCYKENNFEQN 418 (420)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~ 418 (420)
+.+..++..+.+...++....+++
T Consensus 390 ~~~~tlis~f~l~~~~~~~~~~~~ 413 (418)
T PRK09528 390 VLGFTLISAFTLSGKRPLSGLRSQ 413 (418)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 999999999973578867532356
No 160
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter); InterPro: IPR005279 The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The PTR family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analysis of a number of recently discovered peptide transport proteins . This family consists of bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists. .
Probab=99.23 E-value=6.8e-09 Score=60.88 Aligned_cols=147 Identities=16% Similarity=0.237 Sum_probs=118.2
Q ss_pred HHHHHHHHHHHHHH-----HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHCCHHCCCCC
Q ss_conf 87389989999998-----09998999999999999999999999999985-2628999999997643210000001320
Q gi|254780843|r 27 TSLNSILVPKLQNS-----FSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQR-YGYIKGICTGLLIMSLGCILFTATIEIT 100 (420)
Q Consensus 27 ~~~~~~~~p~l~~~-----~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr-~Grr~~l~~~~~~~~i~~ll~~~a~~~~ 100 (420)
+++-+.+.-++-++ +|++.++++.+.++|.---=....+.++..|| +|.||++.++.++..+|.+..+.+. .
T Consensus 31 YG~qgiL~~ylv~~~dkGGLG~~~~~a~~i~gays~lVYll~~~G~wfgDrVwG~~kT~~l~giV~~lGh~~la~~~--~ 108 (501)
T TIGR00924 31 YGMQGILAVYLVAQADKGGLGLDKELATAIFGAYSALVYLLTIVGAWFGDRVWGAKKTLVLAGIVVMLGHLVLALSI--Y 108 (501)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCEEECCHHHHHHHHHHHHHHHHHHHCCC--C
T ss_conf 78999999986405776566656451021225789999999851413201112530433456599998899972166--6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHH----HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf 24678999887775678887653100001230357----8877664431100003454788888641234204677655
Q gi|254780843|r 101 TFKVFLIALCILAIGVVIIQVALNPFISLLGDPNT----AVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSMLA 175 (420)
Q Consensus 101 ~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~----r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~ 175 (420)
|...++.......+|.+..-....+++.+.+++.+ |....++.+...++|+.++|.+.+.+.++..+........
T Consensus 109 n~~~~~~gLg~iA~Gsgl~Kan~ssmvg~lYe~~d~rPrrDggFt~FYm~INiG~f~~pll~g~i~en~g~h~gf~laa 187 (501)
T TIGR00924 109 NSDLLFIGLGLIAVGSGLLKANASSMVGKLYERDDDRPRRDGGFTVFYMSINIGSFISPLLIGVIAENVGYHLGFALAA 187 (501)
T ss_pred CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_conf 5468999999998723524422899999851698998440221136788998999998887536765224267888999
No 161
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.22 E-value=3.4e-09 Score=62.41 Aligned_cols=150 Identities=8% Similarity=0.047 Sum_probs=99.2
Q ss_pred HHHHHHHHHHH-HHHHHHHHCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHC-CCC
Q ss_conf 99998738998-9999998099989999999999-99999999999999985262899999999764321000000-132
Q gi|254780843|r 23 FGGITSLNSIL-VPKLQNSFSLTYLQAMLVEAIF-FSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTAT-IEI 99 (420)
Q Consensus 23 ~g~~~~~~~~~-~p~l~~~~~~s~~~~g~i~s~~-~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a-~~~ 99 (420)
+-+.+...++. .|.+.+|.|.|.+|++.+...+ .....++.+.+|.+..|+|.+|.+.++.++..+..+.+... ..-
T Consensus 234 YKlgDa~~g~M~~pFyl~dlGFS~~eIa~v~K~~Gl~atI~G~~lGG~li~R~Gl~raL~i~gilqalsNL~f~~LA~~g 313 (490)
T PRK11010 234 YKLGDAFAMSLTTTFLIRGVGFDAGEVGVVNKTLGLLATIVGALYGGILMQRLSLFRALLIFGILQGASNAGYWLLSITD 313 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99679999998668877432888889998885899999999999999999997299999999999996789999999708
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHH
Q ss_conf 02467899988777567888765310000123035788776644311000034547888886412342046776
Q gi|254780843|r 100 TTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSM 173 (420)
Q Consensus 100 ~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~ 173 (420)
++.+.+.....+-.++.|....+..++++...+++..+...++..+...++...-....+.+.+..+ |..++.
T Consensus 314 ~~~~~l~~aI~~Enf~~G~gtaAfvAyLssL~n~~ftATQYALlSSl~al~r~~~g~~SG~lve~~G-w~~FFi 386 (490)
T PRK11010 314 KNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHG-WPTFYL 386 (490)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC-CHHHHH
T ss_conf 8489999999999888789999999999985383225999999999997225631565889847518-387999
No 162
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.22 E-value=2.9e-09 Score=62.73 Aligned_cols=149 Identities=15% Similarity=0.114 Sum_probs=108.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCCCC
Q ss_conf 9999987389989999998099989-999999999999999999999999852628999999997643210000001320
Q gi|254780843|r 22 LFGGITSLNSILVPKLQNSFSLTYL-QAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATIEIT 100 (420)
Q Consensus 22 ~~g~~~~~~~~~~p~l~~~~~~s~~-~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~~~ 100 (420)
.+.........+.+.-++.+|.+++ +.+++...+.+|.++|++.+|+++.+.=.-...-+|.+..++..+.... ..
T Consensus 249 FW~~ga~~l~~~p~~~k~~Lg~~~~~~~~~Lla~~~iGI~~GS~la~~ls~~~ie~glvP~Ga~g~~l~~~~l~~---~~ 325 (1150)
T PRK08633 249 FWFVSQLLLANFPAYGKEELGLDNTFQVQYLLAASAIGIGIGSLLAGRLSKRYIELGIVPLGAFGMTLMLFLLPA---AS 325 (1150)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHH---HH
T ss_conf 999999999988999999838980899999999999999999999999967966425458899999999999998---76
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHH
Q ss_conf 2467899988777567888765310000123035788776644311000034547888886412342046776
Q gi|254780843|r 101 TFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSM 173 (420)
Q Consensus 101 ~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~ 173 (420)
+.+...+..++.|+..|......++++....++++|++.++..+....++.+.+..+...+............
T Consensus 326 ~~~~~~~~l~~~G~~gGlfiVPL~A~iQ~~a~~~~r~rviAanNi~n~~~mv~~~~~~~~l~~~~~s~~~~f~ 398 (1150)
T PRK08633 326 SLPSVLLLFFLFGFSGGLFIVPLNALIQFRAPEKELGEVLAANNFLQNVGMLLFLGLTWLFSYLGISPAGLFY 398 (1150)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf 5899999999999986775677899987418865523422898999999999999999999981889999999
No 163
>PRK09848 glucuronide transporter; Provisional
Probab=99.20 E-value=3.8e-09 Score=62.17 Aligned_cols=15 Identities=33% Similarity=0.684 Sum_probs=6.1
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999999999999
Q gi|254780843|r 55 FFSCYFFFSIPAGMF 69 (420)
Q Consensus 55 ~~~~~~i~~~~~G~l 69 (420)
+..+|.+..+|.+.+
T Consensus 119 ~~~~~T~~~iPy~aL 133 (457)
T PRK09848 119 LGLCYSLVNIPYGSL 133 (457)
T ss_pred HHHHHHHHHHHHHHC
T ss_conf 999999998469763
No 164
>TIGR00891 2A0112 MFS transporter, sialate:H+ symporter (SHS) family; InterPro: IPR004742 The sugar transporters belong to a family of membrane proteins responsible for the transport of various sugars in a wide range of prokaryotic and eukaryotic organisms . These integral membrane proteins are predicted to comprise twelve membrane spanning domains. It is likely that the transporters have evolved from an ancient protein present in living organisms before the divergence into prokaryotes and eukaryotes . In mammals, these proteins are expressed in a number of organs . Proteins transporting sugars and other substrates are related in this broader family. Sialic acid transporters belong to this group.; GO: 0015144 carbohydrate transmembrane transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=99.19 E-value=2.7e-11 Score=72.93 Aligned_cols=162 Identities=14% Similarity=0.078 Sum_probs=104.1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH----HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
Q ss_conf 97531120059999999999999999873899899-99998----09998999999999999999999999999985262
Q gi|254780843|r 1 MKDTIARNIQCTKIYIFILFFLFGGITSLNSILVP-KLQNS----FSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGY 75 (420)
Q Consensus 1 m~~~~~k~~~~~~i~i~~~ff~~g~~~~~~~~~~p-~l~~~----~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Gr 75 (420)
||+|..|+...-..++.++.+..-++..+. -++| .++.+ +++|+..+.++.-.+.+|..+|....|.+.|++||
T Consensus 260 M~~~~~KrW~~fvyLvvl~~~~n~~sh~~Q-dllPT~L~a~tdhGlgls~~tv~~ivv~~niGAi~Gg~~fG~l~~~~gr 338 (453)
T TIGR00891 260 MKRSVQKRWLLFVYLVVLLVAANYLSHAIQ-DLLPTYLKADTDHGLGLSKDTVAVIVVVSNIGAIVGGLVFGTLSEVLGR 338 (453)
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHH-HHCCHHHCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHCCHHHHHHHH
T ss_conf 877403124789999999999887521045-5322012135420134573141687787262468775530215566668
Q ss_pred HHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHH
Q ss_conf 89999999976432100000013202467899988777567888765310000123035788776644311000034547
Q gi|254780843|r 76 IKGICTGLLIMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFP 155 (420)
Q Consensus 76 r~~l~~~~~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 155 (420)
|+.++++.....+-.. -.++-.-.+-+++....|++-...-......+..+.|..|.+.|+...|+.+-..+++++..+
T Consensus 339 R~~~v~~~~~g~l~i~-P~Fa~~G~~~a~Lglg~F~~q~~vqG~wGilP~hl~e~~p~d~Ra~~~G~tYqlGnL~~A~a~ 417 (453)
T TIGR00891 339 RLALVIALLLGQLLIV-PVFALSGAEAAVLGLGLFLLQVLVQGVWGILPKHLAELAPADARAVVAGLTYQLGNLAAALAS 417 (453)
T ss_pred HHHHHHHHHHCCHHHH-HHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 9999999986012330-256521417999999999999984157655798860459033246443631457778987623
Q ss_pred HHHHHHHHC
Q ss_conf 888886412
Q gi|254780843|r 156 YIGSVLMLG 164 (420)
Q Consensus 156 ~~~~~l~~~ 164 (420)
.+...+.+.
T Consensus 418 ~I~~~lA~r 426 (453)
T TIGR00891 418 IIEERLAER 426 (453)
T ss_pred HHHHHHHHH
T ss_conf 788875631
No 165
>KOG0569 consensus
Probab=99.19 E-value=4.1e-09 Score=61.99 Aligned_cols=46 Identities=15% Similarity=0.111 Sum_probs=15.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
Q ss_conf 9998999999999999999999999999985262899999999764
Q gi|254780843|r 42 SLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMS 87 (420)
Q Consensus 42 ~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~ 87 (420)
|++..++.+..........+.++.+..+.||+|||+.++.+..+..
T Consensus 301 G~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~ 346 (485)
T KOG0569 301 GFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMA 346 (485)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 9987888999999999999999999999971498689999999999
No 166
>TIGR00899 2A0120 sugar efflux transporter; InterPro: IPR004750 This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both Gram-negative and Gram-positive bacteria.; GO: 0015542 sugar efflux transmembrane transporter activity, 0008643 carbohydrate transport, 0016021 integral to membrane.
Probab=99.17 E-value=8.9e-09 Score=60.30 Aligned_cols=158 Identities=16% Similarity=0.050 Sum_probs=114.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
Q ss_conf 0059999999999999999873899899-999980999899999999999999999999999998526289999999976
Q gi|254780843|r 8 NIQCTKIYIFILFFLFGGITSLNSILVP-KLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIM 86 (420)
Q Consensus 8 ~~~~~~i~i~~~ff~~g~~~~~~~~~~p-~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~ 86 (420)
+.+-.+++...++-+++- +.+...-.| .+.+|+++++.-+|.....-..--.=....+|++.+|+|+|+.+.++.+..
T Consensus 197 ~~r~~rLLfv~~~Lmw~~-n~ly~i~mpl~li~EL~l~~kl~G~~~g~AAGlEiP~M~~Agy~~~R~Gkr~Lm~~A~~~g 275 (377)
T TIGR00899 197 ARRDTRLLFVACTLMWGC-NILYIINMPLFLINELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRLGKRRLMLLAVVAG 275 (377)
T ss_pred CCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 235427999999999750-4788852278999862584189999999976556479999778888875899999999999
Q ss_pred HHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHCC
Q ss_conf 43210000001320246789998877756788876531000012303578877664431100-00345478888864123
Q gi|254780843|r 87 SLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNS-LGTAIFPYIGSVLMLGN 165 (420)
Q Consensus 87 ~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~-~g~~~g~~~~~~l~~~~ 165 (420)
.+-..... ..++-+.....+.+.++..|...+...-+..|..|++-...+.+++..... +|..+...+.|.+.+..
T Consensus 276 ~~fy~~~~---~~~~~~~~~~lq~lna~fiGi~~g~gmlYfqdLmP~~~gs~AttLy~n~~~G~G~i~ag~v~G~~~e~W 352 (377)
T TIGR00899 276 VAFYTGLL---LANSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPGRAGSAATTLYTNTSRGVGWIIAGSVAGILAEIW 352 (377)
T ss_pred HHHHHHHH---HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999998---516289999999999999999998899999862731445899999987521389999998866988875
Q ss_pred CCCH
Q ss_conf 4204
Q gi|254780843|r 166 LASP 169 (420)
Q Consensus 166 ~~~~ 169 (420)
....
T Consensus 353 ~~~A 356 (377)
T TIGR00899 353 SYHA 356 (377)
T ss_pred HHHH
T ss_conf 5799
No 167
>TIGR00881 2A0104 phosphoglycerate transporter family protein; InterPro: IPR000849 Proteins in this group are involved in the transport system that mediates the uptake of a number of sugar phosphates as well as the regulatory components that are responsible for induction of this transport system by external glucose 6-phosphate. In Escherichia coli its role in transmembrane signalling may involve sugar-phosphate-binding sites and transmembrane orientations similar to those of the transport protein . The following proteins in this entry, involved in the uptake of phosphorylated metabolites, are evolutionary related , : E. coli, Bacillus subtilis and Haemophilus influenzae glycerol-3- phosphate transporter (gene glpT). Salmonella typhimurium phosphoglycerate transporter (gene pgtP). E. coli and S. typhimurium hexose-6-phosphate transporter (gene uhpT). E. coli and S. typhimurium protein uhpC. UhpC is necessary for the expression of uhpT and seems to act jointly with the uhpB sensor/kinase protein. Human glucose 6-phosphate translocase . These proteins of about 50 kDa apparently contain 12 transmembrane regions.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=99.13 E-value=2e-09 Score=63.54 Aligned_cols=154 Identities=14% Similarity=0.101 Sum_probs=121.5
Q ss_pred HHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCC----HHH-HHHHHHHHHHH
Q ss_conf 2012221012468889999876431001111110000000001245555456768996223----368-99999999999
Q gi|254780843|r 263 RHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYTT----GFI-SGWSLIAVGLF 337 (420)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~g~~ 337 (420)
.....+++..+.|.+.+...+...+++.+.+...||..+|..+.......+++.+...+.+ ... .....++.|++
T Consensus 21 l~E~~~L~~~dlG~~~s~~~i~Yg~sK~~~G~~sDr~~~r~fl~~GL~l~a~v~~~~gfs~watS~l~~~~~l~~l~G~f 100 (404)
T TIGR00881 21 LVEEIGLSKTDLGLLLSSFSIAYGISKFVMGMVSDRSNPRVFLAIGLILCAIVNIFFGFSTWATSSLWVMAALMALNGLF 100 (404)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 88622888757889999999999874677566532676489999999999999999885223578999999999999887
Q ss_pred HHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999996301565--6999999999999999999999-99996123799--9999999999999999853111
Q gi|254780843|r 338 NSIMFPTIFSLASASLEDQA--SGGSGIICTTISGGVIIPLGVG-YLVDIASLRDA--MFVPAVCYIIIAIYGIYCCYKE 412 (420)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~i~p~i~G-~l~d~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~ 412 (420)
.+..+|+......+-.|++. +..+..+...++||++.|++.. .+....+++.. |.+.+.+.++..++.+...|.+
T Consensus 101 QG~G~P~~~r~~~~W~~~~eRGt~~~~wn~~~nvGG~~~pp~~~~~~~~~~~w~~~~~~~~~g~~aii~s~~~~~~~~~~ 180 (404)
T TIGR00881 101 QGMGWPPCGRLLTKWFSRSERGTWVAIWNISHNVGGGLLPPLVLFGIALLYSWHVVSSFIVPGIIAIIVSLICLLLLRDS 180 (404)
T ss_pred HHHCCCHHHCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 75067521240232157653112667788898875789999999999988165568899999999999988954411577
Q ss_pred HCCC
Q ss_conf 0201
Q gi|254780843|r 413 NNFE 416 (420)
Q Consensus 413 ~~~~ 416 (420)
++.+
T Consensus 181 p~~~ 184 (404)
T TIGR00881 181 PQSV 184 (404)
T ss_pred CCCC
T ss_conf 7778
No 168
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter); InterPro: IPR005279 The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The PTR family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analysis of a number of recently discovered peptide transport proteins . This family consists of bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists. .
Probab=99.12 E-value=4.8e-09 Score=61.64 Aligned_cols=47 Identities=17% Similarity=0.166 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
Q ss_conf 89999999999999999999999999852628999999997643210
Q gi|254780843|r 45 YLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCI 91 (420)
Q Consensus 45 ~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~l 91 (420)
+.-.+...-.-.+|.+++....|.+.|.+|..-.+-.+.+.++++.+
T Consensus 149 DggFt~FYm~INiG~f~~pll~g~i~en~g~h~gf~laaVGm~~gll 195 (501)
T TIGR00924 149 DGGFTVFYMSINIGSFISPLLIGVIAENVGYHLGFALAAVGMALGLL 195 (501)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 22113678899899999888753676522426788899999999999
No 169
>pfam01770 Folate_carrier Reduced folate carrier. The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy, such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules.
Probab=99.11 E-value=8.4e-08 Score=55.41 Aligned_cols=150 Identities=17% Similarity=0.177 Sum_probs=112.8
Q ss_pred HHHHHHHHHHHHHHHHHHH--HH-HHHHHHH-HHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
Q ss_conf 9999999999999998738--99-8999999-80999899999-999999999999999999998526289999999976
Q gi|254780843|r 12 TKIYIFILFFLFGGITSLN--SI-LVPKLQN-SFSLTYLQAML-VEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIM 86 (420)
Q Consensus 12 ~~i~i~~~ff~~g~~~~~~--~~-~~p~l~~-~~~~s~~~~g~-i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~ 86 (420)
.++.+.+| ++||...+- -| +.|.+.. +-|+|+.|+.- +.-.-.-.|+..-+|...+.|-...|++++.+.+..
T Consensus 4 ~~~t~lLC--~fGF~~e~RPsEPflt~YL~g~~kN~T~~qv~neIyPv~TYSyl~~Lv~vfLlTD~lrYKPviil~~l~~ 81 (410)
T pfam01770 4 LKPTFLLC--LFGFFAEFRPSEPFLTPYLLGPDKNITQEQVNNEVYPVWTYSYLALLVPVFLLTDYLRYKPVIILQGLAG 81 (410)
T ss_pred CHHHHHHH--HHHHHHHCCCCCCEEHHHHCCCCCCCCHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 02379999--9999997489985016877288679898997060001018989999999999999972049999988999
Q ss_pred HHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
Q ss_conf 43210000001320246789998877756788876531000012303578877664431100003454788888641234
Q gi|254780843|r 87 SLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNL 166 (420)
Q Consensus 87 ~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 166 (420)
.+.-.+.... ++...+-+..+.-|...+. ..+..+++....++++-.+..+...+..-+|...+..++..++....
T Consensus 82 i~~~~lLl~~---~sl~~mQ~~e~fYG~~~Aa-EvAYysYIYs~Vd~~~YQkvTsy~Raa~L~G~~~s~vlgQllvs~~~ 157 (410)
T pfam01770 82 IVTWLLLLFT---TSVIAMQVMEFFYGVATAA-EVAYYSYIYSKVDPERYQRVTSYTRAATLVGKFLSGVLGQLLVSLGR 157 (410)
T ss_pred HHHHHHHHHH---CCHHHHHHHHHHHHHHHHH-HHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 9999999982---6399999999999988887-77554024674385541569899999999999998888778313477
Q ss_pred C
Q ss_conf 2
Q gi|254780843|r 167 A 167 (420)
Q Consensus 167 ~ 167 (420)
.
T Consensus 158 ~ 158 (410)
T pfam01770 158 V 158 (410)
T ss_pred C
T ss_conf 7
No 170
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.10 E-value=4e-09 Score=62.05 Aligned_cols=156 Identities=17% Similarity=0.165 Sum_probs=109.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
Q ss_conf 2005999999999999999987389989999-998099989999999999999999999999999852628999999997
Q gi|254780843|r 7 RNIQCTKIYIFILFFLFGGITSLNSILVPKL-QNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLI 85 (420)
Q Consensus 7 k~~~~~~i~i~~~ff~~g~~~~~~~~~~p~l-~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~ 85 (420)
||..+..+.+..+++..+ .++.+....+. +.-+|.++.+..+.......+..++.++..++.+|+|+|+++.++.++
T Consensus 234 ~Nrp~~~~l~~~l~~~~~--~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~ 311 (467)
T COG2211 234 KNRPLLLLLLMNLLLFIA--FNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLL 311 (467)
T ss_pred CCCHHHHHHHHHHHHHHH--HHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_conf 264699999999999999--999856522158887587188999999999999999998689999995629999999999
Q ss_pred HHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHH-------HHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf 64321000000132024678999887775678887653100001230357-------88776644311000034547888
Q gi|254780843|r 86 MSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNT-------AVSRLTFAQFFNSLGTAIFPYIG 158 (420)
Q Consensus 86 ~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~-------r~~~~~~~~~~~~~g~~~g~~~~ 158 (420)
..++.++..+.+ .++.+...+...+.++|.+...+...+.+.|..+.+| .+...+......-.|..++..+.
T Consensus 312 ~~i~~~~~~f~~-~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~ 390 (467)
T COG2211 312 LAVGYLLLYFTP-AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIP 390 (467)
T ss_pred HHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999998998516-7616899999999998663224432887224144888872787024678999999999999999999
Q ss_pred HHHHHCC
Q ss_conf 8864123
Q gi|254780843|r 159 SVLMLGN 165 (420)
Q Consensus 159 ~~l~~~~ 165 (420)
++.....
T Consensus 391 g~~L~~~ 397 (467)
T COG2211 391 GWILGAI 397 (467)
T ss_pred HHHHHHC
T ss_conf 9999972
No 171
>PRK09669 putative symporter YagG; Provisional
Probab=99.10 E-value=2.4e-08 Score=58.10 Aligned_cols=27 Identities=15% Similarity=0.074 Sum_probs=9.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 000111000135567789999875420
Q gi|254780843|r 238 MGAVCIFLYVGAEVAIGSIMANYLMRH 264 (420)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (420)
..................+...|....
T Consensus 234 ~~~~~~~~~~~~~~~~~~y~~~y~l~~ 260 (442)
T PRK09669 234 AFNVVLLTAVVVRGGATLYYVKYVMGR 260 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 999999999999976899999999077
No 172
>pfam06609 TRI12 Fungal trichothecene efflux pump (TRI12). This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster.It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes.
Probab=99.10 E-value=1.2e-09 Score=64.63 Aligned_cols=52 Identities=10% Similarity=-0.045 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH-HHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999630156-56999999-999999999999999
Q gi|254780843|r 328 GWSLIAVGLFNSIMFPTIFSLASASLEDQ-ASGGSGII-CTTISGGVIIPLGVG 379 (420)
Q Consensus 328 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~g~~i~p~i~G 379 (420)
....++.|++.+.........+....|++ .+.+++.. ....+|++++-.+.+
T Consensus 409 i~~~il~G~GiG~~~q~~~iavQ~~~p~~digvats~~~f~RslGGaIGvAI~~ 462 (598)
T pfam06609 409 IALSFFSGFVVAWAQDITMLLVQFITTDEDLGVAFAVVAAARPFAGSIFTAAFI 462 (598)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999799876577865222599899899999999999998699999999
No 173
>TIGR00892 2A0113 monocarboxylate transporter; InterPro: IPR004743 Proton-linked monocarboxylate transporters catalyse the rapid transport across the plasma membrane of many monocarboxylates such as lactate, pyruvate, branched-chain oxo acids derived from leucine, valine and isoleucine, and the ketone bodies acetoacetate, beta-hydroxybutyrate and acetate.; GO: 0015355 secondary active monocarboxylate transmembrane transporter activity, 0015711 organic anion transport, 0016021 integral to membrane.
Probab=99.05 E-value=7.4e-09 Score=60.68 Aligned_cols=155 Identities=11% Similarity=0.028 Sum_probs=126.7
Q ss_pred HHHHHHH-----HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCHHHHHHH--HHHHHHHHHHCCHHCCCCC
Q ss_conf 8998999-----999809998999999999999999999999999985--262899999--9997643210000001320
Q gi|254780843|r 30 NSILVPK-----LQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQR--YGYIKGICT--GLLIMSLGCILFTATIEIT 100 (420)
Q Consensus 30 ~~~~~p~-----l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr--~Grr~~l~~--~~~~~~i~~ll~~~a~~~~ 100 (420)
+|-..|. ..+|-|+++.++.++.|+..+.-.+..|-.|.++.+ +-+|.-.+. +++...+..+++ +..+
T Consensus 273 LGlF~P~ifL~pYAkd~gv~~~~AAfLLSi~gF~DifaRP~~Gl~Ag~~~~rP~~~YlFS~A~l~nGlt~L~c---a~a~ 349 (475)
T TIGR00892 273 LGLFVPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSVGLIAGLKLIRPRVQYLFSLALLFNGLTHLLC---ALAS 349 (475)
T ss_pred HHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH---HHHC
T ss_conf 7201103334752125689767789999999998888866668761752201146789999999851788861---3013
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf 24678999887775678887653100001230357887766443110000345478888864123420467765555577
Q gi|254780843|r 101 TFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSMLADTMKD 180 (420)
Q Consensus 101 ~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~ 180 (420)
+|+.+.+.....|++.+.+.....-.+.|..+.++-.+++++..........+||.++|-+.+........+........
T Consensus 350 ~Y~~LV~y~~~FG~sfG~vgal~Fe~LMd~VG~~rFssA~GLvt~ve~~avL~GPPlAG~L~D~~~~Y~y~f~~~G~~v~ 429 (475)
T TIGR00892 350 DYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVV 429 (475)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf 74011257778976888899999999873058744515788999995346532862367885664453567889989999
Q ss_pred HHHHHHH
Q ss_conf 8988864
Q gi|254780843|r 181 YQTDTAR 187 (420)
Q Consensus 181 ~~~~~~~ 187 (420)
.......
T Consensus 430 ~aglfl~ 436 (475)
T TIGR00892 430 LAGLFLA 436 (475)
T ss_pred HHHHHHH
T ss_conf 9999999
No 174
>pfam06813 Nodulin-like Nodulin-like. This family represents a conserved region within plant nodulin-like proteins.
Probab=99.05 E-value=6.4e-09 Score=61.02 Aligned_cols=134 Identities=12% Similarity=0.016 Sum_probs=111.9
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCCC----CHHH
Q ss_conf 738998999999809998999999999999999999999999985262899999999764321000000132----0246
Q gi|254780843|r 28 SLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATIEI----TTFK 103 (420)
Q Consensus 28 ~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~~----~~~~ 103 (420)
...+..-|++|+.+|.|+.|...+.++--+|..++ ++.|.+.|++|++.++.+|.+...+|..+..++..- +++|
T Consensus 19 Y~F~~yS~~LK~~l~~sQ~qL~~ls~a~d~G~~~G-~~~G~~~d~~pp~~vlliGa~~~~~GY~l~wL~v~~~i~~~~~~ 97 (248)
T pfam06813 19 YDFSLYSSALKSSLGYSQVQLNLLGVAKDLGKNFG-WLSGLAAEYLPPWVVLLVGAAMGFVGYGVQWLAVTGKIPGLPYW 97 (248)
T ss_pred CCHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHCC-HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
T ss_conf 56053158999770989999999999999887706-65899982326699999999999999999999972823789899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 789998877756788876531000012303578877664431100003454788888641
Q gi|254780843|r 104 VFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLML 163 (420)
Q Consensus 104 ~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 163 (420)
.+.+..++.+.+.+....++.....+.+| ++|+...++.....++++.+-..+...+..
T Consensus 98 ~~~l~~~l~~ns~~~~nTa~lvt~v~nFP-~~RG~vvgilK~f~GLs~AI~t~iy~a~~~ 156 (248)
T pfam06813 98 LLCLAICLAGNSICWFNTASLVTCIRNFP-ESRGVVLGILKGYAGLSAAIYTQLYTAIFG 156 (248)
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHCC-CCCCHHHHHHHHHHCCHHHHHHHHHHHHCC
T ss_conf 99999999827840431557888887474-334526788877601129999999999808
No 175
>KOG4686 consensus
Probab=99.05 E-value=5.6e-09 Score=61.28 Aligned_cols=130 Identities=18% Similarity=0.197 Sum_probs=104.6
Q ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHH
Q ss_conf 99999809998999999999999999999999999985262899999999764321000000132024678999887775
Q gi|254780843|r 35 PKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATIEITTFKVFLIALCILAI 114 (420)
Q Consensus 35 p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~ 114 (420)
..++|.||+|..+++-+.|.-+.-.++.+++.|.++||+|++...+.+..+..+..-... .-+++--.....+.|.
T Consensus 289 ~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l----~Ft~lsPy~~m~~lGL 364 (459)
T KOG4686 289 MFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGL----FFTFLSPYTSMTFLGL 364 (459)
T ss_pred HHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHH----HHHHCCHHHHHHHHHH
T ss_conf 777876188754224456645534335245677767652664215789999999876667----7534157988999850
Q ss_pred HHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
Q ss_conf 678887653100001230357887766443110000345478888864123420
Q gi|254780843|r 115 GVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLAS 168 (420)
Q Consensus 115 g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~ 168 (420)
..+....+..+.+....|+++.+.+.+..++..++|-+.-|.+.+.+.+...+.
T Consensus 365 sysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y 418 (459)
T KOG4686 365 SYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSY 418 (459)
T ss_pred HHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCH
T ss_conf 088899887433466377877040688999998511558755441266688860
No 176
>pfam06779 DUF1228 Protein of unknown function (DUF1228). This family represents the N-terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many family members are hypothetical proteins.
Probab=99.04 E-value=1.7e-09 Score=63.89 Aligned_cols=76 Identities=13% Similarity=0.031 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCC
Q ss_conf 9999873899899999980999899999999999999999999999998526289999999976432100000013
Q gi|254780843|r 23 FGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATIE 98 (420)
Q Consensus 23 ~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~ 98 (420)
.|+.+....|++|.+++|.++|.+|.||+.++.++||.++++...++.+|.++|+++..+++...+..+.+++..+
T Consensus 4 mGigRFaYTpiLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~a~~~~~~~~~~~~~~~gl~~~~~~~~~m~~t~~ 79 (85)
T pfam06779 4 MGIGRFSYTPILPGMMAEGQFSLSDAGWIASANYAGYLVGALLASFGWSHGRERRVLLGGLLATVLLLAAMALTNG 79 (85)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 5569999975618999845998888999999999999999999999885025899999999999999999983467
No 177
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.02 E-value=3.9e-08 Score=57.06 Aligned_cols=154 Identities=15% Similarity=-0.018 Sum_probs=101.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCC-C--
Q ss_conf 9999987389989999998099989999999999999999999999999852628999999997643210000001-3--
Q gi|254780843|r 22 LFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATI-E-- 98 (420)
Q Consensus 22 ~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~-~-- 98 (420)
.+......+..+-+.-++.+|.++.+++++..++.+|-++|++.+|+++.+.=.-...-+|.+..++..+-..++. .
T Consensus 238 FW~~ga~~l~~~p~~~k~~l~~~~~~~~~lla~fsiGI~~GS~la~~ls~~~ie~glvp~Ga~g~~~~~~~L~~~~~~~~ 317 (1139)
T PRK06814 238 FWLIGAVVLSQLPLLAKDTLGGDENVVTLFLAVFSIGIAVGSFLCSKLLEGEITLLYVPIGALGMGIFGLDLAFASSSVP 317 (1139)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999997099999981897889999999999999999999999947980133007889999999999998712477
Q ss_pred --------------CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
Q ss_conf --------------202467899988777567888765310000123035788776644311000034547888886412
Q gi|254780843|r 99 --------------ITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLG 164 (420)
Q Consensus 99 --------------~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 164 (420)
.++.|-..+..++.|+..|......++++....++++|++.++-.+....++.+.+..+...+...
T Consensus 318 ~~~~~~~~~~~f~~~~~~~~~~~~l~~~g~~gGlfiVPL~A~iQ~~a~~~~r~rviAanNiln~~~Mv~~~~~~~~l~~~ 397 (1139)
T PRK06814 318 AEPTQLKSILVFLSKRHGWRILIDLFFLAIIGGLYIVPLFAALQAWANPAHRARVIAANNVINAIFMVGGTIILAVLQAL 397 (1139)
T ss_pred CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 88503657999971623499999999999745004522589988528876667877999999999999999999999983
Q ss_pred CCCCHHHHHHH
Q ss_conf 34204677655
Q gi|254780843|r 165 NLASPNTSMLA 175 (420)
Q Consensus 165 ~~~~~~~~~~~ 175 (420)
...........
T Consensus 398 ~~s~~~~f~~~ 408 (1139)
T PRK06814 398 GFSIPWILLFL 408 (1139)
T ss_pred CCCHHHHHHHH
T ss_conf 98899999999
No 178
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.97 E-value=2.7e-09 Score=62.87 Aligned_cols=95 Identities=14% Similarity=-0.012 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-HHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHH
Q ss_conf 689999999999999999999999996301565-69-999999999999999999999------9996123799999999
Q gi|254780843|r 325 FISGWSLIAVGLFNSIMFPTIFSLASASLEDQA-SG-GSGIICTTISGGVIIPLGVGY------LVDIASLRDAMFVPAV 396 (420)
Q Consensus 325 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~g~~i~p~i~G~------l~d~~g~~~~~~~~~~ 396 (420)
++.....++..++.=...|+-.+...+..|++- +. .+........|..++..+.+. ..+.......|..+..
T Consensus 395 ~~lvl~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~ 474 (498)
T COG3104 395 WWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGV 474 (498)
T ss_pred HHHHHHHHHHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999972878899999868498999999999999999988551651443343155554344436999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 99999999998531110201279
Q gi|254780843|r 397 CYIIIAIYGIYCCYKENNFEQNT 419 (420)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~ 419 (420)
...++...-+...++.||..|+.
T Consensus 475 v~i~~~~~~~~~~~~~~r~~~~~ 497 (498)
T COG3104 475 VAIVIGILLLLLSPKLNRMMKGV 497 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999998529989753379
No 179
>TIGR00880 2_A_01_02 Multidrug resistance protein; InterPro: IPR004734 Multidrug resistance proteins are molecular pumps that participate in a low energy shock adaptive response in some bacteria. They mediate cellular resistance to toxicants such as cycloheximide (CYH), 4-nitroquinoline N-oxide (4-NQO), cadmium, and hydrogen peroxide in yeast .; GO: 0015238 drug transporter activity, 0015893 drug transport, 0016021 integral to membrane.
Probab=98.94 E-value=6.8e-08 Score=55.87 Aligned_cols=134 Identities=13% Similarity=0.045 Sum_probs=102.3
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHC---CHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88999987643100111111000000000124555545676899622---3368999-9999999999999999999996
Q gi|254780843|r 276 QHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYT---TGFISGW-SLIAVGLFNSIMFPTIFSLASA 351 (420)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~ 351 (420)
.+...+........+..+...||++|+.+++.......+........ ++..... .=.+.|++.+...+...+...|
T Consensus 2 ~~~~~yAl~q~~~~P~~~~l~~r~GRk~~~~~g~~~f~~~~~~~al~nPh~~~~~L~i~R~~~G~~~~~~~~~g~a~~aD 81 (148)
T TIGR00880 2 LLVAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSQALFALSNPHSNITVLIISRFLQGFGAAAALVAGAALIAD 81 (148)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 79999999999999999998842162899999999999999998844872379999999999999888999989888877
Q ss_pred HHHHH-HHH-HHHHH-HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 30156-569-99999-999999999999999999---961237999999999999999999853
Q gi|254780843|r 352 SLEDQ-ASG-GSGII-CTTISGGVIIPLGVGYLV---DIASLRDAMFVPAVCYIIIAIYGIYCC 409 (420)
Q Consensus 352 ~~~~~-~~~-~~~~~-~~~~~g~~i~p~i~G~l~---d~~g~~~~~~~~~~~~~~~~~~~~~~~ 409 (420)
..+++ ... +-+.. .....|-.++|++.|++. |..+|++.|++.++...+..+...+..
T Consensus 82 ~~~~~~~~~~a~g~~~~~~~~g~~lgP~~G~~~~~~~~~~~wr~~F~~~~~~~~~~~~~~~~~~ 145 (148)
T TIGR00880 82 IYPPEEERSVALGLMSAGIALGPILGPPLGGVLANVKQALGWRAPFLILAALALAAFILLAFLL 145 (148)
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 4264047889999999999999999999989998755401765899999999999999998860
No 180
>KOG4332 consensus
Probab=98.89 E-value=2.6e-09 Score=62.93 Aligned_cols=108 Identities=14% Similarity=0.158 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCC
Q ss_conf 99999999987389989999998099989999999999999999999999999852628999999997643210000001
Q gi|254780843|r 18 ILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATI 97 (420)
Q Consensus 18 ~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~ 97 (420)
.++++..-.+++.+|.+-.+-++++.-..|+|.+.-+-+....++..+.|-|+||-|||+.-+.-.+.+.+. ....
T Consensus 44 lVyslmmAgDWLQgPYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLs----CiTK 119 (454)
T KOG4332 44 LVYSLMMAGDWLQGPYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILS----CITK 119 (454)
T ss_pred HHHHHHHHHHHHCCCEEEEEEHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHH----HHHH
T ss_conf 999999852342196456450120756770110221014147889989888776625654014103889999----9860
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHC
Q ss_conf 32024678999887775678887653100001
Q gi|254780843|r 98 EITTFKVFLIALCILAIGVVIIQVALNPFISL 129 (420)
Q Consensus 98 ~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~ 129 (420)
..+.|-.+.+.|.+.|+..+....+..++...
T Consensus 120 hSpqYkVLmVGR~LGGiaTsLLFSaFEsWlia 151 (454)
T KOG4332 120 HSPQYKVLMVGRVLGGIATSLLFSAFESWLIA 151 (454)
T ss_pred CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 48753787525455017899999999999988
No 181
>PRK11462 putative transporter; Provisional
Probab=98.87 E-value=1.8e-06 Score=48.71 Aligned_cols=15 Identities=20% Similarity=0.259 Sum_probs=6.3
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999999999999
Q gi|254780843|r 55 FFSCYFFFSIPAGMF 69 (420)
Q Consensus 55 ~~~~~~i~~~~~G~l 69 (420)
+..+|.+..+|.+.+
T Consensus 119 ~~~~yT~~~iPy~aL 133 (460)
T PRK11462 119 LTLLYTVVNIPYCAL 133 (460)
T ss_pred HHHHHHHHHHHHHHH
T ss_conf 999988645368752
No 182
>PRK11195 major facilitator family transporter; Provisional
Probab=98.86 E-value=2.8e-07 Score=52.79 Aligned_cols=23 Identities=9% Similarity=0.187 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999998
Q gi|254780843|r 49 MLVEAIFFSCYFFFSIPAGMFIQ 71 (420)
Q Consensus 49 g~i~s~~~~~~~i~~~~~G~l~D 71 (420)
||+.+..+.+-.++...+|.+.|
T Consensus 127 glve~~T~~AILlGti~gg~L~~ 149 (415)
T PRK11195 127 GWIEGSTIAAILLGTVLGGVLAD 149 (415)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 29999999999999999999973
No 183
>pfam02487 CLN3 CLN3 protein. This is a family of proteins from the CLN3 gene. A missense mutation of glutamic acid (E) to lysine (K) at position 295 in the human protein has been implicated in Juvenile neuronal ceroid lipofuscinosis (Batten disease).
Probab=98.85 E-value=2.2e-06 Score=48.33 Aligned_cols=139 Identities=12% Similarity=0.099 Sum_probs=95.3
Q ss_pred HHHHHHHHHHHHHH-----HHHHHHHHHH-------------------HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999998738-----9989999998-------------------09998999999999999999999999999985
Q gi|254780843|r 17 FILFFLFGGITSLN-----SILVPKLQNS-------------------FSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQR 72 (420)
Q Consensus 17 ~~~ff~~g~~~~~~-----~~~~p~l~~~-------------------~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr 72 (420)
++.|+++|+.++.. +.+. ++.++ ++-+....+.+.-+-.+...+..+.+-+..+|
T Consensus 2 ~vaFwl~Gl~NN~~YVvilSAA~-Di~~~~~~~~~~~~~~~~~~~~~~~~c~~~~t~~vLlAdi~P~l~~kl~aP~fi~~ 80 (409)
T pfam02487 2 YVAFWLLGLCNNFGYVVMLSAAE-DILSHQRGHVDSDPPPTCLPHSTRRECKSLSTAAVLLADILPSLIIKLTAPFFIHR 80 (409)
T ss_pred EEHHHHHHHHHHHHHHHHHHHHH-HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 65489888741015431496599-88601025667777765555433334466635588887678899999986773331
Q ss_pred HCHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHH
Q ss_conf 26289999999976432100000013202467899988777567888765310000123035788776644311000034
Q gi|254780843|r 73 YGYIKGICTGLLIMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTA 152 (420)
Q Consensus 73 ~Grr~~l~~~~~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 152 (420)
+..+.=+.+..++.++|.++.+++ ++.+.-+++..+.+.+.|........+.... ++ ..++-+.++.+.++.
T Consensus 81 vpy~~Ri~~~~~ls~~g~l~Va~s---~~~~~~L~GVvlas~ssg~GE~tfL~lt~~y-~~----~~lsawsSGTG~AGl 152 (409)
T pfam02487 81 FPFGFRVWIVILLQASSFFLVAFS---KSIAMSLAGVVFASIGSGLGEITFLALTAHY-PR----IVIAGWSSGTGGAGL 152 (409)
T ss_pred CCCHHHHHHHHHHHHHCEEEEEEE---CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHC-CH----HHHHHCCCCCCCHHH
T ss_conf 783099999999986126899983---6189999999988633130299999998545-71----454300356671567
Q ss_pred HHHHHHHHHHHC
Q ss_conf 547888886412
Q gi|254780843|r 153 IFPYIGSVLMLG 164 (420)
Q Consensus 153 ~g~~~~~~l~~~ 164 (420)
+|+..-..+...
T Consensus 153 ~Gs~~Y~~lT~~ 164 (409)
T pfam02487 153 IGAFSYAFLTQI 164 (409)
T ss_pred HHHHHHHHHHHH
T ss_conf 778899988733
No 184
>TIGR00897 2A0118 polyol permease; InterPro: IPR004748 Proteins in this entry are mostly known or predicted polyol transporters. The best characterised of these proteins are DalT and RbtT from Klebsiella pneumoniae, which tranpsort D-arabinatol and ribotol respectively. Like other members of the Major Facilitator Superfamily (MFS), DalT and RbtT appear to be secondary transporters capable only of transporting solutes in response to chemiosmotic ion gradients . They contain a total of twelve predicted transmembrane helices; six in the N-terminal portion of the protein, and six in the C-terminal portion. Residues defining substrate specificity lie in the N-terminal region of these proteins.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=98.84 E-value=2.9e-08 Score=57.74 Aligned_cols=138 Identities=13% Similarity=0.124 Sum_probs=107.6
Q ss_pred HHHHH-HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH-HHHHHHHHHHHHHCCHHCCCC--CHHHHHH
Q ss_conf 99899-9999809998999999999999999999999999985262899-999999764321000000132--0246789
Q gi|254780843|r 31 SILVP-KLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKG-ICTGLLIMSLGCILFTATIEI--TTFKVFL 106 (420)
Q Consensus 31 ~~~~p-~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~-l~~~~~~~~i~~ll~~~a~~~--~~~~~~~ 106 (420)
.+++| ...+|+|.|.++==-+=+..+++..+..++.|.+-||+|-|++ +-.|.+.+++.+++....+.. ++|++..
T Consensus 250 avflPmm~~a~~G~StseWLQiWg~~Ff~nIvfN~ifGivGdKlGW~~~V~WFGgvG~giftlalYY~P~~~Ghs~av~~ 329 (411)
T TIGR00897 250 AVFLPMMFLAELGFSTSEWLQIWGTLFFTNIVFNVIFGIVGDKLGWKNTVIWFGGVGCGIFTLALYYIPQFIGHSFAVVL 329 (411)
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 67635899976387402589999999999999999997541446873166763764589999999865665225899999
Q ss_pred HHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHH
Q ss_conf 9988777567888765310000123035788776644311000034547888886412342046
Q gi|254780843|r 107 IALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPN 170 (420)
Q Consensus 107 ~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~ 170 (420)
+..++.|...+...|.. + +--...+|+++.+++..+...++...++|.+...++........
T Consensus 330 iia~~~G~~lAgyVPl~-A-~~Ptlapk~KGAA~SVlNL~aGlsaF~aPaia~lfig~~ga~GV 391 (411)
T TIGR00897 330 IIAIIYGILLAGYVPLA-A-VLPTLAPKDKGAAMSVLNLSAGLSAFVAPAIAVLFIGLLGAIGV 391 (411)
T ss_pred HHHHHHHHHHHHHHHHH-H-HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf 99999999998663488-7-42234899873156488888628878889999999850020279
No 185
>TIGR00896 CynX cyanate transporter; InterPro: IPR004747 This family of proteins is involved in active transport of cyanate. The cyanate transporter (CynX) in Escherichia coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=98.84 E-value=1e-07 Score=54.95 Aligned_cols=139 Identities=14% Similarity=-0.003 Sum_probs=102.9
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHH
Q ss_conf 7389989999998099989999999999999999999999999852-628999999997643210000001320246789
Q gi|254780843|r 28 SLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRY-GYIKGICTGLLIMSLGCILFTATIEITTFKVFL 106 (420)
Q Consensus 28 ~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~-Grr~~l~~~~~~~~i~~ll~~~a~~~~~~~~~~ 106 (420)
.+.--=+|++-.|-|.|+.+.|++.+...+.....++..-.++||. .+|+.+.+-.++..+|...+.+.+.. ....
T Consensus 230 Y~~igWlP~Ili~~G~sa~~AG~ll~l~~~~~~~~~ll~P~~A~r~kdqR~i~~~~~~~~L~G~~Gl~~~P~~---~~~~ 306 (372)
T TIGR00896 230 YIVIGWLPAILISHGVSAATAGLLLALMQLAQLASALLIPLLASRVKDQRGIVVVVAVLQLVGLCGLLFAPLH---GLWA 306 (372)
T ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH---HHHH
T ss_conf 9999999999986388775689999999999876899988997048856999999999999999999985045---9999
Q ss_pred HHHHHHHHHHHHHHHHHHCCHHCCCC-HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCH
Q ss_conf 99887775678887653100001230-3578877664431100003454788888641234204
Q gi|254780843|r 107 IALCILAIGVVIIQVALNPFISLLGD-PNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASP 169 (420)
Q Consensus 107 ~~~~i~g~g~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~ 169 (420)
+...+.|+|.|...+-+.+++.+... .+..++-.++.++...+-...||.+.+.+-+....|.
T Consensus 307 iW~~~~G~G~G~~f~LaLtli~lRs~~a~~AA~LS~maQs~GYllA~~GP~~vG~L~d~~g~w~ 370 (372)
T TIGR00896 307 IWALVLGLGQGGAFSLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLLVGVLHDISGNWL 370 (372)
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 9999983012036999999999962168899999888788999998645888888872156889
No 186
>TIGR00879 SP MFS transporter, sugar porter (SP) family; InterPro: IPR003663 The sugar transporters belong to a superfamily of membrane proteins responsible for the binding and transport of various carbohydrates, organic alcohols, and acids in a wide range of prokaryotic and eukaryotic organisms . These integral membrane proteins are predicted to comprise twelve membrane spanning domains. It is likely that the transporters have evolved from an ancient protein present in living organisms before the divergence into prokaryotes and eukaryotes . In mammals, these proteins are expressed in a number of organs . This family includes just the sugar transporters. ; GO: 0005351 sugar:hydrogen ion symporter activity, 0008643 carbohydrate transport, 0016020 membrane.
Probab=98.83 E-value=2.9e-07 Score=52.73 Aligned_cols=84 Identities=18% Similarity=0.155 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCHH----HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 246888999987643100111111000000000124555545676899622336----8999999999999999999999
Q gi|254780843|r 272 ISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYTTGF----ISGWSLIAVGLFNSIMFPTIFS 347 (420)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~~ 347 (420)
...+..++....+...+.+..++..++++|++.+........+...+....... ...+.=++.|++.+......-.
T Consensus 134 ~~~~~~v~~~~~G~~~g~l~~g~~~~~~GRk~~l~~~~~~~v~g~~~~~~~~~~~~~~~~~~gR~l~G~g~G~~s~~~P~ 213 (572)
T TIGR00879 134 SLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIVALLFVIGAILMGAAATALSVEMLIVGRVLLGIGVGIASALVPM 213 (572)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88999999999999999987556777533626889999999999999997531020588999999999853189998999
Q ss_pred HHHHHHHH
Q ss_conf 99963015
Q gi|254780843|r 348 LASASLED 355 (420)
Q Consensus 348 ~~~~~~~~ 355 (420)
+..|..|+
T Consensus 214 Y~sE~AP~ 221 (572)
T TIGR00879 214 YISEIAPK 221 (572)
T ss_pred HHHHCCCH
T ss_conf 89733856
No 187
>KOG3764 consensus
Probab=98.81 E-value=5.5e-08 Score=56.33 Aligned_cols=151 Identities=11% Similarity=0.039 Sum_probs=114.1
Q ss_pred HHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH-HHHHHHHHH
Q ss_conf 4201222101246888999987643100111111000000000124555545676899622336899999-999999999
Q gi|254780843|r 262 MRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYTTGFISGWSL-IAVGLFNSI 340 (420)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~ 340 (420)
......+.+....+.+.+.............+...||++.+..+..+.........++.+.+.....+.. .+=|++.+.
T Consensus 96 ~~~~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~ 175 (464)
T KOG3764 96 AEAISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAF 175 (464)
T ss_pred HHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 21037554320023789999999997454421567773564279999999999999998705107899999986443888
Q ss_pred HHHHHHHHHHHHHHHHH--HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999996301565--699999-9999999999999999999961237999999999999999999853111
Q gi|254780843|r 341 MFPTIFSLASASLEDQA--SGGSGI-ICTTISGGVIIPLGVGYLVDIASLRDAMFVPAVCYIIIAIYGIYCCYKE 412 (420)
Q Consensus 341 ~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~g~~i~p~i~G~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (420)
....-.++..+.+|++. +.+-+. .....+|-.++|+..|.++|..|++..|.++++.+++-....++..+..
T Consensus 176 ~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~ 250 (464)
T KOG3764 176 ADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPT 250 (464)
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHEECCC
T ss_conf 875338999987155304447899999987503321587440057644875748999999999999998655833
No 188
>KOG0253 consensus
Probab=98.79 E-value=2.7e-07 Score=52.83 Aligned_cols=26 Identities=15% Similarity=0.109 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999996123799999999
Q gi|254780843|r 371 GVIIPLGVGYLVDIASLRDAMFVPAV 396 (420)
Q Consensus 371 ~~i~p~i~G~l~d~~g~~~~~~~~~~ 396 (420)
..-|..+.+++.|..|-...+..+.+
T Consensus 394 efPGlLIt~~iverlGRKkTMal~l~ 419 (528)
T KOG0253 394 EFPGLLITGVIVERLGRKKTMALSLI 419 (528)
T ss_pred HCCCHHHHHHHHHHHCCHHHHHHHHH
T ss_conf 28706679999998631358899999
No 189
>pfam06963 FPN1 Ferroportin1 (FPN1). This family represents a conserved region approximately 100 residues long within eukaryotic Ferroportin1 (FPN1), a protein that may play a role in iron export from the cell. This family may represent a number of transmembrane regions in Ferroportin1.
Probab=98.76 E-value=4.4e-06 Score=46.77 Aligned_cols=348 Identities=13% Similarity=0.046 Sum_probs=161.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999998738998999999809-9989999999999999999999999999852628999999997643210
Q gi|254780843|r 13 KIYIFILFFLFGGITSLNSILVPKLQNSFS-LTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCI 91 (420)
Q Consensus 13 ~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~-~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~l 91 (420)
.+.++.-.|+......+..-..|....+.. -|---++...-.-.+...++++..|...||..|.|++......--++..
T Consensus 4 ~~~LY~shfls~wgdRmw~Fav~lfl~~l~P~sLl~~avygl~~~ls~i~~gp~vG~~vD~~~Rl~vir~~i~~Qn~sv~ 83 (433)
T pfam06963 4 LIRLYVSHFLSTWGDRMWEFAVPLFMAELFPGSLLPAAVYGLVTSLSALVLGPIVGQLVDRLPRLKAIRLSLLLQNLSVA 83 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99999999987877889999999999998588639999999999999999327888773343058999999999799999
Q ss_pred CCHH--------C-----CCCCHHHHHHHHHHHHHHHHHHHHHHHHC-CHHCC------CCHHHHHHHHHHHHHHCCCHH
Q ss_conf 0000--------0-----13202467899988777567888765310-00012------303578877664431100003
Q gi|254780843|r 92 LFTA--------T-----IEITTFKVFLIALCILAIGVVIIQVALNP-FISLL------GDPNTAVSRLTFAQFFNSLGT 151 (420)
Q Consensus 92 l~~~--------a-----~~~~~~~~~~~~~~i~g~g~~~~~~~~~~-~~~~~------~~~~~r~~~~~~~~~~~~~g~ 151 (420)
..+. . ....-+..+.+...+.|........+... .-.|| .++..+.+..+...-.-....
T Consensus 84 ~s~~~~~~~l~~~~~~~~~~~~~~~~lf~~~~~~~~i~~Las~~~~I~iERDWVVvia~~~~~~L~~~Na~mRRIDL~ck 163 (433)
T pfam06963 84 VSGALFIALFVVLSLLSTAASPLLIPLFAVLVLLGAVEKLASTANTVAIERDWVVVISGGRPIALAKMNATLRRIDLFCK 163 (433)
T ss_pred HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999984454335677519999999999999999999751135784016999708983567874588899999999
Q ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHC---------
Q ss_conf 45478888864123420467765555577898886420011211001345555432101231012332100---------
Q gi|254780843|r 152 AIFPYIGSVLMLGNLASPNTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHI--------- 222 (420)
Q Consensus 152 ~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 222 (420)
..+|.+.+.+...................-...........+................++++.+++++.+.
T Consensus 164 llaP~~~G~l~s~~s~~~~~~~~~~~n~~S~~~Ey~ll~~VY~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (433)
T pfam06963 164 LLAPLLVGLLLSFVSLRAAAGFLLGWNLVSVVVEYFLLWSVYKSVPALSRKAEVRTARDEEANSELQEPANRPSIVKRVK 243 (433)
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 88999999999525759999999999999999999999999850837542775544554455543110122046899999
Q ss_pred -----CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf -----011112221111111000111000135567789999875420122210124688899998764310011111100
Q gi|254780843|r 223 -----SFLKTLDILANPRFTMGAVCIFLYVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILS 297 (420)
Q Consensus 223 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (420)
.....+...+.+. ..........+.....+......|...+ |++....+..-.......+.+........+
T Consensus 244 ~~~~~~~~~w~~Y~~q~V-flaslalalLY~TVLsf~~lmt~yL~~~---G~s~~~igi~Rg~~ai~Gi~~T~~~p~l~k 319 (433)
T pfam06963 244 ESVKTQKDGWREYVRQPV-FLASFALSLLYFTVLSFGTLMTAYLLHQ---GLSPSVIGGMRGGSAVTGLAGTFAYPFLEK 319 (433)
T ss_pred HHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHHCCCHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 989999754999972814-7888999999998746728899999975---998999999999999999999998999998
Q ss_pred HHHCCCHHHHHHHHHHHHHHHHH----HCCH--HHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHH-HHHHHHHH
Q ss_conf 00000001245555456768996----2233--689999999999999-----99999999999630156-56999999
Q gi|254780843|r 298 RFSAEKTLCAFATTACSLVILSS----YTTG--FISGWSLIAVGLFNS-----IMFPTIFSLASASLEDQ-ASGGSGII 364 (420)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~g~~~~-----~~~~~~~~~~~~~~~~~-~~~~~~~~ 364 (420)
|.+..+...........+..... .... ........+.|...+ ..--....+..|..|+. ++..++..
T Consensus 320 riGl~rtGl~sl~~Q~~~L~~~v~s~~~~~s~~~~~s~~~l~~gi~lSRlGLW~fDL~~~ql~Qe~V~e~~Rg~v~gvq 398 (433)
T pfam06963 320 RIGLLRTGLWSLWWQLSCLALAVASVFLPGSSMSALSAFLLFGGVALSRIGLWSFDLAVTQLLQEGIPESERNVVGGTQ 398 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHH
T ss_conf 8515887799999999999999996111799711689999999999998669888999999997028854255022899
No 190
>KOG0254 consensus
Probab=98.76 E-value=4.4e-06 Score=46.77 Aligned_cols=82 Identities=15% Similarity=0.155 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCHH----------HHHHHHH----HHHHHHHHHHH
Q ss_conf 999987643100111111000000000124555545676899622336----------8999999----99999999999
Q gi|254780843|r 278 TAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYTTGF----------ISGWSLI----AVGLFNSIMFP 343 (420)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~----~~g~~~~~~~~ 343 (420)
..........+........||.+|+...........+........... ....... .+..+.....|
T Consensus 335 ~~~~~~v~~~~~~~~~~lvd~~GRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~ 414 (513)
T KOG0254 335 SIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGP 414 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999998735414899879999999999999862110365411377999999999999999987324
Q ss_pred HHHHHHHHHHHHHHHH
Q ss_conf 9999999630156569
Q gi|254780843|r 344 TIFSLASASLEDQASG 359 (420)
Q Consensus 344 ~~~~~~~~~~~~~~~~ 359 (420)
..+....|..|.+.+.
T Consensus 415 v~w~~~sEifp~~~r~ 430 (513)
T KOG0254 415 VPWVIVSEIFPLRLRS 430 (513)
T ss_pred HHHHHHHHHCCHHHHH
T ss_conf 7888886024177898
No 191
>TIGR00886 2A0108 nitrite transporter; InterPro: IPR004737 This family represents nitrate/nitrite antiporters in bacteria, fungi, algae and marine diatoms. Nitrate transporters in Escherichia coli are involved in excretion of nitrite produced by the dissimilatory reduction of nitrate. NarK is polytopic membrane protein with 12 transmembrane domains which is involved in nitrate uptake and nitrite excretion and is thought to function as a nitrate/nitrite antiporter. At low concentrations of nitrate, NarK mediates the electrogenic excretion of nitrite rather than nitrate/nitrite exchange. This process prevents intracellular accumulation of toxic levels of nitrite and allows further detoxification in the periplasm through the action of nitrite reductase . In the opportunistic fungal pathogen Aspergillus fumigatus the nitrate transporter crnA clusters with nitrite reductase (niiA) and nitrate reductase (niaD). NiaD, niiA and crnA are induced by nitrate and repressed by ammonium at the transcriptional level . In Hebeloma cylindrosporum the nitrate transporter polypeptide (NRT2) is characterised by 12 transmembrane domains and presents both a long putative intracellular loop and a short C-terminal tail, two structural features which distinguish fungal high-affinity transporters from their plant homologues. Transcription is repressed by ammonium and strongly stimulated by nitrate but also by organic nitrogen or nitrogen deficiency. ; GO: 0015103 inorganic anion transmembrane transporter activity, 0015698 inorganic anion transport, 0016021 integral to membrane.
Probab=98.76 E-value=2.6e-07 Score=52.92 Aligned_cols=115 Identities=16% Similarity=0.127 Sum_probs=82.5
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCC-----HHHHHHHHHHHHHHHH
Q ss_conf 12221012468889999876431001111110000000001245555456768996223-----3689999999999999
Q gi|254780843|r 265 DTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYTT-----GFISGWSLIAVGLFNS 339 (420)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~g~~~~ 339 (420)
.++++|..+...............|+..+.+.|++++|+..........+.+....+.. +......+-++--..+
T Consensus 32 ~dl~Ls~~Q~~~~~~~p~~~g~~~R~~~G~l~d~~GpR~~~~~~~~~~~IP~~~~~~~~~~p~~s~~~L~~~rlf~Gi~G 111 (472)
T TIGR00886 32 DDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRKTTTLSLLLLAIPCLLAGLAVQDPSTSYSVLLLLRLFIGIAG 111 (472)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 33147999999999999999999999988634776718999999999999999998412689989999999999996755
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHH-HHHHHHH----HHH---HHHH
Q ss_conf 99999999999630156-569999999-9999999----999---9999
Q gi|254780843|r 340 IMFPTIFSLASASLEDQ-ASGGSGIIC-TTISGGV----IIP---LGVG 379 (420)
Q Consensus 340 ~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~g~~----i~p---~i~G 379 (420)
..|........+-+|++ .+.+-++.. .++.|+. +.| ++..
T Consensus 112 g~Fa~~~~~~s~fFp~~~~GtA~gl~aG~GN~G~~~~~~~~Pa~f~i~~ 160 (472)
T TIGR00886 112 GSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPALFAIIA 160 (472)
T ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 4688766566306882201467588614326789999999999999999
No 192
>KOG3574 consensus
Probab=98.75 E-value=1.4e-07 Score=54.36 Aligned_cols=148 Identities=11% Similarity=0.149 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHCHHHHH
Q ss_conf 1120059999999999999999873899899999980999899999999999999999999999998-----52628999
Q gi|254780843|r 5 IARNIQCTKIYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQ-----RYGYIKGI 79 (420)
Q Consensus 5 ~~k~~~~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~D-----r~Grr~~l 79 (420)
..|+.+...+++..++-+-|.-.++.+ .+|.+-+.=|.|.++.+...-+ +..+ -..+.+.++.| |+||||.-
T Consensus 25 ~~~~d~~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS~a-y~P~-sLKllWaPiVDs~y~k~~GrrksW 101 (510)
T KOG3574 25 TLKGDRSSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQAIFSFA-YWPF-SLKLLWAPIVDSVYSKRFGRRKSW 101 (510)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHHH-HHHHHHCCCCCCHHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHHCCCCCE
T ss_conf 555302308999999998378616765-3278731799650122123333-4388-899887755678887751555101
Q ss_pred H------HHHHHHHHHHHCC-HHC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCH
Q ss_conf 9------9999764321000-000--132024678999887775678887653100001230357887766443110000
Q gi|254780843|r 80 C------TGLLIMSLGCILF-TAT--IEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLG 150 (420)
Q Consensus 80 ~------~~~~~~~i~~ll~-~~a--~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 150 (420)
+ +|.....++...- +.. ...++-..+-...++.-+..+.-..+...+.-..-.+++-+-+......+...|
T Consensus 102 vvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~G 181 (510)
T KOG3574 102 VVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAG 181 (510)
T ss_pred EEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHH
T ss_conf 31169999999999860798554668988306899999999999875434434588887428864684357889887563
Q ss_pred HHHHH
Q ss_conf 34547
Q gi|254780843|r 151 TAIFP 155 (420)
Q Consensus 151 ~~~g~ 155 (420)
..++.
T Consensus 182 yfL~~ 186 (510)
T KOG3574 182 YFLGN 186 (510)
T ss_pred HHHHC
T ss_conf 88625
No 193
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.75 E-value=2e-06 Score=48.52 Aligned_cols=147 Identities=14% Similarity=0.013 Sum_probs=96.6
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHCCHHCCCCCHHHH
Q ss_conf 987389989999998099989999999999999999999999999852-6289999999976432100000013202467
Q gi|254780843|r 26 ITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRY-GYIKGICTGLLIMSLGCILFTATIEITTFKV 104 (420)
Q Consensus 26 ~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~-Grr~~l~~~~~~~~i~~ll~~~a~~~~~~~~ 104 (420)
.+.+.-.-+|.+-.|-|+|..+.|++.|...+.....++..-.+++|. ++|+..+.....+.+|.+.+.+.+....+++
T Consensus 223 ~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw 302 (395)
T COG2807 223 LYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW 302 (395)
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999758787875029999999999898788999988315234999999999999988998401479999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCHHCCCC-HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf 8999887775678887653100001230-35788776644311000034547888886412342046776555
Q gi|254780843|r 105 FLIALCILAIGVVIIQVALNPFISLLGD-PNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSMLAD 176 (420)
Q Consensus 105 ~~~~~~i~g~g~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~ 176 (420)
.++.|.|.+...+.....+.+..+ +++.++..++.+.....-...||.+.+.+-+..++|........
T Consensus 303 ----~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~ 371 (395)
T COG2807 303 ----ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLA 371 (395)
T ss_pred ----HHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf ----999907610378999999986057867889988876301589874401667678972288088999999
No 194
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter; InterPro: IPR001927 It has been shown that integral membrane proteins that mediate the intake of a wide variety of molecules with the concomitant uptake of sodium ions (sodium symporters) can be grouped, on the basis of sequence and functional similarities into a number of distinct families. This collection of sequences represents the sodium: galactoside symporter family (SGF). Like sugar transport proteins, these integral membrane proteins are predicted to comprise twelve membrane spanning domains. ; GO: 0005215 transporter activity, 0006814 sodium ion transport, 0016020 membrane.
Probab=98.74 E-value=7e-07 Score=50.79 Aligned_cols=161 Identities=13% Similarity=0.158 Sum_probs=113.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHCHHHHHHH
Q ss_conf 31120059999999999999999873899899999980999-89999999999-99999999999999985262899999
Q gi|254780843|r 4 TIARNIQCTKIYIFILFFLFGGITSLNSILVPKLQNSFSLT-YLQAMLVEAIF-FSCYFFFSIPAGMFIQRYGYIKGICT 81 (420)
Q Consensus 4 ~~~k~~~~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s-~~~~g~i~s~~-~~~~~i~~~~~G~l~Dr~Grr~~l~~ 81 (420)
.+.||..+..+....+++..++ ++.+-..-+.-+ +.++ +....+..+.. ....+++.+...++.+|+|||+++..
T Consensus 237 ~l~~N~qL~~l~~~~l~~~~a~--~i~~~~~~YYf~-Yvlg~~~lf~~~~~~~~~~~~l~~~~l~P~l~k~~grk~~~~~ 313 (470)
T TIGR00792 237 ALFKNDQLLILCLAYLFYLLAF--NIKNGVQVYYFT-YVLGDPELFSILGLIAFIGAGLIGVLLFPRLVKKFGRKRLFLI 313 (470)
T ss_pred HHHCCCHHHHHHHHHHHHHHHH--HHHHHHHHEEEE-EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9852888999999999999999--987656302345-7746678999999999999999999878778876125999999
Q ss_pred HHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC----HHCCCC-------HHHHHHHHHHHHHHCCCH
Q ss_conf 999764321000000132024678999887775678887653100----001230-------357887766443110000
Q gi|254780843|r 82 GLLIMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPF----ISLLGD-------PNTAVSRLTFAQFFNSLG 150 (420)
Q Consensus 82 ~~~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~----~~~~~~-------~~~r~~~~~~~~~~~~~g 150 (420)
+.++..+|.++....+...+.+...+...+.+++.....+....+ ++|..+ .|..+...+......-.|
T Consensus 314 ~~~~~~~g~l~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~w~~~vi~~~D~VdYGE~k~G~R~Eg~~~S~~~f~~K~G 393 (470)
T TIGR00792 314 GILLMVLGLLILFFVGKASNLPLILVLIIIAGFGQNFVTGLVWALQVIMVADTVDYGEWKTGVRAEGLVYSVRTFVRKLG 393 (470)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 99999999999987316779999999999998877677898788886442023221020148550799999999999998
Q ss_pred HHHHHHHHHHHHHCCCC
Q ss_conf 34547888886412342
Q gi|254780843|r 151 TAIFPYIGSVLMLGNLA 167 (420)
Q Consensus 151 ~~~g~~~~~~l~~~~~~ 167 (420)
.+++..+.+......+-
T Consensus 394 ~A~~g~~~G~~L~~~GY 410 (470)
T TIGR00792 394 QALAGFLVGLILGIIGY 410 (470)
T ss_pred HHHHHHHHHHHHHHHCC
T ss_conf 89989999999997277
No 195
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2; InterPro: IPR005988 SV2 proteins are abundant synaptic vesicle proteins expressed in two major (SV2A and SV2B) and one minor isoform (SV2C) that resemble transporter proteins. SV2B knockout mice are phenotypically normal while SV2A- and SV2A/SV2B double knockout mice exhibit severe seizures and die postnatally. Without SV2 proteins, presynaptic Ca^2+ accumulation during consecutive action potentials causes abnormal increases in neurotransmitter release that destabilize synaptic circuits and induce epilepsy . ; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane.
Probab=98.71 E-value=1.8e-09 Score=63.78 Aligned_cols=143 Identities=10% Similarity=0.067 Sum_probs=125.1
Q ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCCCCHHHH
Q ss_conf 99873899899999980999899999999999999999999999998526289999999976432100000013202467
Q gi|254780843|r 25 GITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATIEITTFKV 104 (420)
Q Consensus 25 ~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~~~~~~~ 104 (420)
....+++..+|.-.++.-++++..||+..+.+++..++...+|-++||.|||..+++++.+......+ ......+..
T Consensus 181 ~~~~~~g~~~p~~~~~~c~~~~~~g~~g~~~~~g~~~g~~~wgg~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~g~g~ 257 (742)
T TIGR01299 181 VEVFVVGFVLPSAEKDLCLPDSGKGWLGLIVYLGLLVGAFLWGGLADKLGRKQCLLICLSVNGFFAFL---SSFVQGYGF 257 (742)
T ss_pred CEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEEHHHHHHHHH---HHHHHHHHH
T ss_conf 21454321104443322024677632578888888887765210233204300023321012578888---877543247
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHH
Q ss_conf 899988777567888765310000123035788776644311000034547888886412342046
Q gi|254780843|r 105 FLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPN 170 (420)
Q Consensus 105 ~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~ 170 (420)
+..++.+.|.|.+...|....+..+....++|+..+.+....+.+|..........++....|...
T Consensus 258 ~~~c~~~~g~g~gg~~p~~~~~~~~~~~~~~~g~~~~w~c~~w~~gg~~~~~~~w~~~p~~gw~~~ 323 (742)
T TIGR01299 258 FLLCRLLSGFGIGGAIPTVFSYFAEFLAREKRGEHLSWLCLFWLIGGVYAAALAWAIIPHYGWSFS 323 (742)
T ss_pred HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 887887622566630468888888887542035325678788875346666555443102453212
No 196
>KOG0255 consensus
Probab=98.69 E-value=1.6e-06 Score=48.99 Aligned_cols=30 Identities=17% Similarity=0.180 Sum_probs=9.7
Q ss_pred HHHHHHHCCCCCCCCCHHHCCCHHHHHHHH
Q ss_conf 876431001111110000000001245555
Q gi|254780843|r 282 WGSAMIGRFIGTWILSRFSAEKTLCAFATT 311 (420)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (420)
..+...+....+.+.|+++|+.+.......
T Consensus 128 ~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~ 157 (521)
T KOG0255 128 FLGVLVGSLIFGPLSDRFGRKPVLLVSLLL 157 (521)
T ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 999999999999887743760699999999
No 197
>KOG3762 consensus
Probab=98.66 E-value=1.4e-07 Score=54.34 Aligned_cols=89 Identities=15% Similarity=0.142 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH-H
Q ss_conf 200599999999999999998738998999999809998999999999999999999999999985262899999999-7
Q gi|254780843|r 7 RNIQCTKIYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLL-I 85 (420)
Q Consensus 7 k~~~~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~-~ 85 (420)
+.....++..=+.+|.++-..+.+-|+++..-+++|++..|.|.+...--+-.++..|++|.++||+-+||-++++.. .
T Consensus 7 ~~~~r~l~~~k~f~~~~~~~~g~l~pll~vy~kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~ 86 (618)
T KOG3762 7 WDISRALIVAKLFYLFFGARFGSLFPLLAVYFKQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLL 86 (618)
T ss_pred CCCCHHHHEEEEEEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 77623554001125663313451216788899871998778654440888999986777789999987428444798999
Q ss_pred HHHHHHCCHH
Q ss_conf 6432100000
Q gi|254780843|r 86 MSLGCILFTA 95 (420)
Q Consensus 86 ~~i~~ll~~~ 95 (420)
....+++..+
T Consensus 87 ~v~a~fll~f 96 (618)
T KOG3762 87 SVTATFLLVF 96 (618)
T ss_pred HHHHHHHEEE
T ss_conf 9999883464
No 198
>pfam05978 UNC-93 Ion channel regulatory protein UNC-93. This family of proteins is a component of a multi-subunit protein complex which is involved in the coordination of muscle contraction. UNC-93 is most likely an ion channel regulatory protein.
Probab=98.65 E-value=6.8e-07 Score=50.84 Aligned_cols=131 Identities=8% Similarity=-0.015 Sum_probs=100.8
Q ss_pred HHHHHHHHHHHHHH-CCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHH
Q ss_conf 73899899999980-999899999-9999999999999999999985262899999999764321000000132024678
Q gi|254780843|r 28 SLNSILVPKLQNSF-SLTYLQAML-VEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATIEITTFKVF 105 (420)
Q Consensus 28 ~~~~~~~p~l~~~~-~~s~~~~g~-i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~~~~~~~~ 105 (420)
++...++..+.+|= +-.+...|. -.++-+..+.+..+++..+.+|+|.|..++++.+.+..-.. +...++.+.+
T Consensus 17 ni~~svi~si~~~~p~~i~~~~Gy~SLaiiY~~f~~s~~faP~iv~~lg~K~~lv~g~~~Y~~f~~----~~~~p~~~~l 92 (157)
T pfam05978 17 FILESVIHSLHERDPGTISAYAGYYSLAIIYFFFTVSCLFAPSVVDILTPKWAMVIGALCYASFQL----GFLFLNSYYL 92 (157)
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH----HHHHHHHHHH
T ss_conf 799999998720376766578647879999999999997179999997509999999999999999----9989879999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 999887775678887653100001230357887766443110000345478888864
Q gi|254780843|r 106 LIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLM 162 (420)
Q Consensus 106 ~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 162 (420)
+....+.|+|.+..+.+...++.+..+++.+++..++..+....+..+|.++...+.
T Consensus 93 y~as~l~G~~aa~lw~~qg~ylt~~s~~~t~~rn~giFW~i~q~s~i~Gnl~~~~~f 149 (157)
T pfam05978 93 YFSSALLGVGAAFLWTGQGQYLTENSTRETIERNTSIQWAIGKSSLIFGGIFLFFVF 149 (157)
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999887399999802503432387200110367999999783999889999841
No 199
>KOG2532 consensus
Probab=98.65 E-value=6.2e-07 Score=51.07 Aligned_cols=51 Identities=14% Similarity=-0.035 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf 777567888765310000123035788776644311000034547888886
Q gi|254780843|r 111 ILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVL 161 (420)
Q Consensus 111 i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 161 (420)
+..+-.|.......+.+.....++--....+...+....|.-.|+.+...+
T Consensus 133 ~~R~lqGl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~ 183 (466)
T KOG2532 133 VLRFLQGLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPV 183 (466)
T ss_pred HHHHHCCHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999971046766644031020105888889999999999989989998864
No 200
>KOG1330 consensus
Probab=98.61 E-value=8.5e-09 Score=60.40 Aligned_cols=149 Identities=15% Similarity=0.091 Sum_probs=87.2
Q ss_pred HHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHH-HHHHHHHHHHHH
Q ss_conf 4201222101246888999987643100111111000000000124555545676899622336899-999999999999
Q gi|254780843|r 262 MRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYTTGFISG-WSLIAVGLFNSI 340 (420)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~ 340 (420)
..+..++.+....+.+...+........++.+++.||+.|+.++..+..+-....+...+....+.. +.=.+.|.+.+.
T Consensus 58 ~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs 137 (493)
T KOG1330 58 EVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEAS 137 (493)
T ss_pred HHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf 78876088902056014899999999998899887642741587558899999999988899999999999884240544
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999630156569-9999-99999999999999999999612-379999999999999999998531
Q gi|254780843|r 341 MFPTIFSLASASLEDQASG-GSGI-ICTTISGGVIIPLGVGYLVDIAS-LRDAMFVPAVCYIIIAIYGIYCCY 410 (420)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~g~~i~p~i~G~l~d~~g-~~~~~~~~~~~~~~~~~~~~~~~~ 410 (420)
..|...+...|.+++..+. .-++ .....+|+.+|-++.+.+.+.++ |+++|.+.++..+++++..++..+
T Consensus 138 ~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~ 210 (493)
T KOG1330 138 YSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVR 210 (493)
T ss_pred HCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCEEEEEEEEHHHHHHHHHHHHHHCC
T ss_conf 1102026766407602566778875421013564147740154157663689887400899999999875035
No 201
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.60 E-value=1.2e-05 Score=44.69 Aligned_cols=16 Identities=19% Similarity=0.125 Sum_probs=5.4
Q ss_pred HHHHHHHHCCCHHHHH
Q ss_conf 7664431100003454
Q gi|254780843|r 139 RLTFAQFFNSLGTAIF 154 (420)
Q Consensus 139 ~~~~~~~~~~~g~~~g 154 (420)
.-++...+...+..++
T Consensus 145 ~q~fn~lGa~~gp~~g 160 (422)
T COG0738 145 AQAFNGLGAILGPLLG 160 (422)
T ss_pred HHHHHHHHHHHHHHHH
T ss_conf 9986416989999999
No 202
>KOG0637 consensus
Probab=98.59 E-value=2.5e-07 Score=53.04 Aligned_cols=151 Identities=13% Similarity=0.113 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHCHHHHHHHH-HHH
Q ss_conf 9999999999999999873899899999980999899999999999999999999999998----52628999999-997
Q gi|254780843|r 11 CTKIYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQ----RYGYIKGICTG-LLI 85 (420)
Q Consensus 11 ~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~D----r~Grr~~l~~~-~~~ 85 (420)
...+.+...-+-.-|....--...|+..+++|+...-.+.+--+--+.-.+.||..|..+| ||||||.++.. ...
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~ 111 (498)
T KOG0637 32 RKLISVASIAAGVQFGWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLL 111 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 78999999999999999988631459999728985300030213565031323232300135543124556169886689
Q ss_pred HHHHHHCCHHCCCCC--------------HHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHH-HHHHHHHHCCCH
Q ss_conf 643210000001320--------------24678999887775678887653100001230357887-766443110000
Q gi|254780843|r 86 MSLGCILFTATIEIT--------------TFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVS-RLTFAQFFNSLG 150 (420)
Q Consensus 86 ~~i~~ll~~~a~~~~--------------~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~-~~~~~~~~~~~g 150 (420)
.+++..+.+.++... ...+..+..-+.-+..-.....+.++..|...++++.+ +.+.......+|
T Consensus 112 i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avG 191 (498)
T KOG0637 112 IAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVG 191 (498)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHC
T ss_conf 98889765007766687547854664068999998776788765556431599999886067666311240678888733
Q ss_pred HHHHHHHHHHH
Q ss_conf 34547888886
Q gi|254780843|r 151 TAIFPYIGSVL 161 (420)
Q Consensus 151 ~~~g~~~~~~l 161 (420)
..+|...++..
T Consensus 192 nvLGY~~g~y~ 202 (498)
T KOG0637 192 NVLGYALGSYL 202 (498)
T ss_pred CEEEEECCCCC
T ss_conf 50013133456
No 203
>TIGR00889 2A0110 nucleoside transporter; InterPro: IPR004740 This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease (NupG) and xanthosine permease (XapB) from Escherichia coli.; GO: 0005337 nucleoside transmembrane transporter activity, 0015858 nucleoside transport, 0016021 integral to membrane.
Probab=98.55 E-value=7.4e-07 Score=50.67 Aligned_cols=159 Identities=14% Similarity=0.221 Sum_probs=115.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
Q ss_conf 1200599999999999999998738998999999809998--------99999999999999999999999998526289
Q gi|254780843|r 6 ARNIQCTKIYIFILFFLFGGITSLNSILVPKLQNSFSLTY--------LQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIK 77 (420)
Q Consensus 6 ~k~~~~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~--------~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~ 77 (420)
-||++...-+++. ++.|....+.+..-...-+|++-++ ...+.+.|+-.+.-..+-+-......|||-|+
T Consensus 212 fknkr~~iFF~fs--~llga~L~i~n~FgN~fL~~~~~~P~FA~SF~vk~asi~ms~sQ~sE~~FiLtiPFFlkRfGIK~ 289 (435)
T TIGR00889 212 FKNKRMAIFFLFS--MLLGAELQITNIFGNGFLHEFGKDPEFADSFVVKNASILMSLSQFSEILFILTIPFFLKRFGIKK 289 (435)
T ss_pred HCCCCHHHHHHHH--HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 5088546789999--99756888765304521011257886201123213288774889999999985225531344789
Q ss_pred HHHHHHHHHHHHHHCC--HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHH-HCCCHHHHH
Q ss_conf 9999999764321000--0001320246789998877756788876531000012303578877664431-100003454
Q gi|254780843|r 78 GICTGLLIMSLGCILF--TATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQF-FNSLGTAIF 154 (420)
Q Consensus 78 ~l~~~~~~~~i~~ll~--~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~~g 154 (420)
+++++++.+++=.-++ +-.+....+.++.+...+.|+..-..+.....++....+++-|+.+-|+... .++.|+.+|
T Consensus 290 V~l~s~Vaw~lRfgfF~YGsdp~~fg~~LL~Ls~ivyG~afDFfnisgsvfVek~v~~~iRasAQGl~~~~~~GfG~~lG 369 (435)
T TIGR00889 290 VLLLSLVAWALRFGFFAYGSDPEYFGYVLLLLSMIVYGCAFDFFNISGSVFVEKEVPVAIRASAQGLFLLMVNGFGSLLG 369 (435)
T ss_pred HHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999876503078985489999999999986544103445789960027866667888999999701777775
Q ss_pred HHHHHHHHHCCC
Q ss_conf 788888641234
Q gi|254780843|r 155 PYIGSVLMLGNL 166 (420)
Q Consensus 155 ~~~~~~l~~~~~ 166 (420)
..++|...+...
T Consensus 370 ~~lsG~~ve~~~ 381 (435)
T TIGR00889 370 YILSGVVVEKYF 381 (435)
T ss_pred HHHHHHHHHHHH
T ss_conf 445636664331
No 204
>TIGR00898 2A0119 cation transport protein; InterPro: IPR004749 Organic cation transport proteins belong to this group. The protein from human is a sodium-dependent, high affinity carnitine transporter that also transports organic cations without the involvement of sodium. It is involved in the active cellular uptake of carnitine.; GO: 0015075 ion transmembrane transporter activity, 0006811 ion transport, 0016021 integral to membrane.
Probab=98.48 E-value=3.2e-05 Score=42.45 Aligned_cols=126 Identities=14% Similarity=0.208 Sum_probs=80.5
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHH-HHHHHHHHHHHHHHHHHHH
Q ss_conf 012468889999876431001111110000000001245555456768996223368999-9999999999999999999
Q gi|254780843|r 270 DGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYTTGFISGW-SLIAVGLFNSIMFPTIFSL 348 (420)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~ 348 (420)
+.....+..+.+..+.+.+..+.+.++||++|++.+.......++...+..+.++..... .-.+.|++.+..++..+.+
T Consensus 138 ~~~~~~L~~s~~~~G~L~Gs~~~G~lsDrfGRk~~L~~s~l~~~~~g~~~a~SP~~~~~~vfR~L~G~~~~g~~~~~~~L 217 (557)
T TIGR00898 138 DAWKVDLTQSLFFVGVLLGSLVLGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIAGIWVVAVVL 217 (557)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEE
T ss_conf 25776688999999999868888778635204899999999998878651275689999999999613100202577776
Q ss_pred HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99630156569999---9999999999999999999996123799999999
Q gi|254780843|r 349 ASASLEDQASGGSG---IICTTISGGVIIPLGVGYLVDIASLRDAMFVPAV 396 (420)
Q Consensus 349 ~~~~~~~~~~~~~~---~~~~~~~g~~i~p~i~G~l~d~~g~~~~~~~~~~ 396 (420)
..|..|++.+...+ +.....+|..+-|.++=.+-|. ||++-.....+
T Consensus 218 ~~E~~~~~~R~~~~~lG~~~~~~~G~~~L~l~AY~~~~S-gWR~L~l~~s~ 267 (557)
T TIGR00898 218 NTEFLPKKQRAIVGILGIQVFFSLGLLLLPLVAYFIPDS-GWRWLQLAVSL 267 (557)
T ss_pred EEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCC-HHHHHHHHHHH
T ss_conf 775327366157661035888887699987788653785-58999999998
No 205
>KOG2533 consensus
Probab=98.47 E-value=1.2e-05 Score=44.59 Aligned_cols=118 Identities=11% Similarity=-0.022 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999999999999999999985262899999999764321000000132024678999887775678887653100
Q gi|254780843|r 47 QAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPF 126 (420)
Q Consensus 47 ~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~ 126 (420)
..+--.+.-...+.++-.++-..+.-.+.|--+-.++....+...++.+ .+...--.-.....-+-.|..+.+..+.
T Consensus 78 ~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~---~~~~~~s~~~~ialr~llGl~es~~wP~ 154 (495)
T KOG2533 78 LVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGF---LTAAVHSFPGLIALRFLLGLFESGGWPG 154 (495)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH---HHHHHHCHHHHHHHHHHHHHHHHCCCHH
T ss_conf 1132676868999999999985699998747878999999999999999---9998835689999999999987146169
Q ss_pred HHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 00123035788776644311000034547888886412342
Q gi|254780843|r 127 ISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLA 167 (420)
Q Consensus 127 ~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 167 (420)
.........+....+...+.+....-+|..+++.+......
T Consensus 155 ~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~ 195 (495)
T KOG2533 155 VVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFK 195 (495)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 99999875381455478899998362456889999988887
No 206
>pfam00854 PTR2 POT family. The POT (proton-dependent oligopeptide transport) family all appear to be proton dependent transporters.
Probab=98.42 E-value=4.7e-05 Score=41.63 Aligned_cols=99 Identities=21% Similarity=0.189 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHHHHCCHHCCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC---HHHHHHHHHHHHHHCC
Q ss_conf 99999999764321000000132-----024678999887775678887653100001230---3578877664431100
Q gi|254780843|r 77 KGICTGLLIMSLGCILFTATIEI-----TTFKVFLIALCILAIGVVIIQVALNPFISLLGD---PNTAVSRLTFAQFFNS 148 (420)
Q Consensus 77 ~~l~~~~~~~~i~~ll~~~a~~~-----~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~---~~~r~~~~~~~~~~~~ 148 (420)
|++.+|.+++.+|.++...++.. .....+.....+..+|.|..-+...+...|.++ +++|.+..+++..+.+
T Consensus 2 rtI~~g~~~~~~G~~lL~~sa~~~~~~~~~~~~~~~gL~liaiG~G~~K~nis~~~~~qy~~~~~~~~~s~F~~fY~~iN 81 (372)
T pfam00854 2 KTILLGSIIYAIGHVLLTLGAIPPSLSPVQVALFYIGLYLIALGTGGIKPNVSAFGADQFDETQDPRRDGFFSWFYFSIN 81 (372)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf 02899999999999999999666545642299999999999966457013289889986799860567768889999999
Q ss_pred CHHHHHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf 003454788888641234204677655
Q gi|254780843|r 149 LGTAIFPYIGSVLMLGNLASPNTSMLA 175 (420)
Q Consensus 149 ~g~~~g~~~~~~l~~~~~~~~~~~~~~ 175 (420)
+|..+++...+.+-+...++..+....
T Consensus 82 iGa~~~~~~~~~l~~~~g~~~gF~i~~ 108 (372)
T pfam00854 82 AGSLIATIITPYLQQNVGYPLGFGLPA 108 (372)
T ss_pred HHHHHHCCHHHHHHHHCCHHHHHHHHH
T ss_conf 999984026678877223577998715
No 207
>KOG1479 consensus
Probab=98.40 E-value=5.4e-05 Score=41.32 Aligned_cols=122 Identities=13% Similarity=0.108 Sum_probs=57.2
Q ss_pred HHHHHHHHHH----HHHHHHHHHHHHHHHCCCHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH-
Q ss_conf 9999999999----873899899999980999899---99999999999999999999999852628999999997643-
Q gi|254780843|r 17 FILFFLFGGI----TSLNSILVPKLQNSFSLTYLQ---AMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSL- 88 (420)
Q Consensus 17 ~~~ff~~g~~----~~~~~~~~p~l~~~~~~s~~~---~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i- 88 (420)
+..|++.|.. .+..-...++..+++--++.+ ....+..-.+...+....--.+.-|.-+| +..++....+
T Consensus 20 ~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~~~~--~~~~l~~~~il 97 (406)
T KOG1479 20 YLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHNSKNFTSSYTLAAQIPLLLFNLLNAFLNTRLRTR--VGYLLSLIAIL 97 (406)
T ss_pred HHHHHHHHCCHHCCHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHH
T ss_conf 9999998104002428662338889865679866888999999999999999999999998888999--99999999999
Q ss_pred HHHCCHH------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHH
Q ss_conf 2100000------0132024678999887775678887653100001230357887766
Q gi|254780843|r 89 GCILFTA------TIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLT 141 (420)
Q Consensus 89 ~~ll~~~------a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~ 141 (420)
....+.+ ......|........+.+.+.+..+.......++. |++.-...+.
T Consensus 98 ~i~~l~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~-P~~ytqavm~ 155 (406)
T KOG1479 98 FIVTLDLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGLF-PSEYTQAVMS 155 (406)
T ss_pred HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC-CHHHHHHHHH
T ss_conf 999999986305776523599999999998601365305301213017-8888778984
No 208
>pfam03219 TLC TLC ATP/ADP transporter.
Probab=98.39 E-value=5.6e-05 Score=41.24 Aligned_cols=154 Identities=12% Similarity=0.037 Sum_probs=96.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHCHHHHHHH
Q ss_conf 1200599999999999999998738998999999809---9989999999999999-99999999999985262899999
Q gi|254780843|r 6 ARNIQCTKIYIFILFFLFGGITSLNSILVPKLQNSFS---LTYLQAMLVEAIFFSC-YFFFSIPAGMFIQRYGYIKGICT 81 (420)
Q Consensus 6 ~k~~~~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~---~s~~~~g~i~s~~~~~-~~i~~~~~G~l~Dr~Grr~~l~~ 81 (420)
.|+-..+++...++||...|.++++- .++|.+= .....+..+-.-..+. ..+......++++|++|++++-.
T Consensus 19 ~~~E~~kf~~m~lmff~i~f~y~~lR----~~KD~lvv~~~gae~IpflK~~~vlP~a~~~~~~y~kl~n~~~~~klFy~ 94 (491)
T pfam03219 19 HRHELKKFLPMALMMFCILFNYNILR----DIKDSLVVTAIGAEVIPFLKVWGVLPSAILFTIIYAKLSNRLSREKVFYI 94 (491)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHH----HCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 18689899999999999999999998----60020787258849999999999989999999999999752777578999
Q ss_pred HHHHHHHHHHCCHHCC-------------------CCCHHHH---------HHHHHHHH-HHHHHHHHHHHHCCHHCCCC
Q ss_conf 9997643210000001-------------------3202467---------89998877-75678887653100001230
Q gi|254780843|r 82 GLLIMSLGCILFTATI-------------------EITTFKV---------FLIALCIL-AIGVVIIQVALNPFISLLGD 132 (420)
Q Consensus 82 ~~~~~~i~~ll~~~a~-------------------~~~~~~~---------~~~~~~i~-g~g~~~~~~~~~~~~~~~~~ 132 (420)
....+.....++++.- ..+.+-. .-...... -.|.-.....-.....|.+.
T Consensus 95 ~~~~Fl~ff~lf~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~W~~slfYv~aElWgsvvlslLFW~fANeitt 174 (491)
T pfam03219 95 IISFFLVFFALFAFVLYPNRDILHPNPEADKLLSILPPGFKWFIAMVRNWSYSLFYIMAELWGSVVLSLLFWQFANQITT 174 (491)
T ss_pred HHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999992648751987799988732530479999999888899999999998999999999999985079
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 3578877664431100003454788888641
Q gi|254780843|r 133 PNTAVSRLTFAQFFNSLGTAIFPYIGSVLML 163 (420)
Q Consensus 133 ~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 163 (420)
.++..|..++...+.+++..+++.....+..
T Consensus 175 ~~eAKRfyplf~~gan~~li~sG~~~~~~s~ 205 (491)
T pfam03219 175 VEEAKRFYPLFGLGGNLALIISGQIIVYLSN 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999899999999999999999999999985
No 209
>PRK10133 L-fucose transporter; Provisional
Probab=98.37 E-value=6.3e-05 Score=40.98 Aligned_cols=13 Identities=31% Similarity=0.534 Sum_probs=5.3
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999976432
Q gi|254780843|r 77 KGICTGLLIMSLG 89 (420)
Q Consensus 77 ~~l~~~~~~~~i~ 89 (420)
..+++++.+.+.|
T Consensus 118 ~~fL~alFvig~G 130 (438)
T PRK10133 118 TLFLVGLFIIAAG 130 (438)
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999971
No 210
>KOG2615 consensus
Probab=98.36 E-value=6.6e-06 Score=45.90 Aligned_cols=41 Identities=10% Similarity=0.023 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999852628999999997643
Q gi|254780843|r 48 AMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSL 88 (420)
Q Consensus 48 ~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i 88 (420)
.+.......-.+.+.+.++..+-.++.-|.-=-..+.+..+
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~ 106 (451)
T KOG2615 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLI 106 (451)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_conf 30012247658999999766554225665076189999999
No 211
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family; InterPro: IPR014090 RhtX from Sinorhizobium meliloti 1021 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes..
Probab=98.13 E-value=0.00024 Score=38.09 Aligned_cols=365 Identities=13% Similarity=0.040 Sum_probs=187.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-----H-HCHHHHHHHHHHHHHH
Q ss_conf 999999999999873899899999980999899999999999999999999999998-----5-2628999999997643
Q gi|254780843|r 15 YIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQ-----R-YGYIKGICTGLLIMSL 88 (420)
Q Consensus 15 ~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~D-----r-~Grr~~l~~~~~~~~i 88 (420)
.+..+|---|.-..+.=.++|.+.+|=|-+....+++ +...+.. +..+...++.| | .||||.-++-.=+...
T Consensus 5 ~l~~LYL~QGIP~~l~~~AlP~LlR~~GA~~~Ala~l-~L~~LP~-V~KF~~AP~VD~~~~~~GlG~RR~W~~P~Q~~V~ 82 (391)
T TIGR02718 5 TLGLLYLSQGIPIGLALDALPTLLREDGAPLTALALL-PLVGLPL-VVKFLWAPLVDNRWSARGLGRRRSWVLPMQLLVV 82 (391)
T ss_pred EEHHHHHHCCHHHHHHHHHHCHHHHCCCCHHHHHHHH-HHHHHHH-HHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 0047777400279999983024530068715799987-7875589-9999862313023678878865301214899999
Q ss_pred HHHCCHHCC---CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
Q ss_conf 210000001---32024678999887775678887653100001230357887766443110000345478888864123
Q gi|254780843|r 89 GCILFTATI---EITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGN 165 (420)
Q Consensus 89 ~~ll~~~a~---~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 165 (420)
.++. ..+. ...+-........+.....+.-..+..-+..+.+..+.-.+..........+|...|....-.+.+..
T Consensus 83 ~~l~-slA~~~~~~A~~~~AvGLL~~~~L~Sa~QDIA~DG~A~~H~~G~~LA~~NAvQ~a~v~~G~~~GG~~~L~L~~~~ 161 (391)
T TIGR02718 83 ACLA-SLALVGLDVAGAGWAVGLLAVASLASATQDIATDGMAAEHLNGRTLAKVNAVQIAGVMIGFFGGGAGTLVLIGKF 161 (391)
T ss_pred HHHH-HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf 9988-887402220168899999999999754654533541435205744678888888557864420058999998641
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 42046776555557789888642001121100134555543210123101233210001111222111111100011100
Q gi|254780843|r 166 LASPNTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFL 245 (420)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (420)
++........... ....... ...++++..+.+.......+..+..|+|..+.....-..
T Consensus 162 G~R~~~L~~Ac~~-L~~L~~~--------------------l~l~~r~~~~~~ap~~~~ASL~~F~rRP~a~~lLAlAL~ 220 (391)
T TIGR02718 162 GQRPAFLLLACVP-LASLVCV--------------------LWLKDRAVASPEAPLARRASLLRFLRRPLALSLLALALL 220 (391)
T ss_pred CHHHHHHHHHHHH-HHHHHHH--------------------HHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 5159999999987-9999999--------------------870577767788742465568887525645899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH-HHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHH-HHHHHHHCC
Q ss_conf 0135567789999875420122210124688899-99876431001111110000000001245555456-768996223
Q gi|254780843|r 246 YVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTA-IYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACS-LVILSSYTT 323 (420)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 323 (420)
...........-..|.. +.+......+.+.. ........+...+.++.||.+-.+.......+... +.+.+....
T Consensus 221 ~~~~~~~~~Gl~~~yL~---Da~~~~~~IG~l~~a~~~~~~~LG~~~~A~lvR~~GL~~~~~l~~~l~G~~alL~f~~~~ 297 (391)
T TIGR02718 221 SAMTAVSGFGLSKLYLV---DAGWPLEAIGRLGMAGGLVTVLLGCGGGALLVRRLGLWRTLILGVGLAGSLALLWFAQAA 297 (391)
T ss_pred HHHHHHHHCCCHHHHHH---HCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 98775541141022340---024327763102115899999997679999999998999999998988899999999836
Q ss_pred HHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 368------99999999999999999999999963015--6569-99999999999999999999999961237999999
Q gi|254780843|r 324 GFI------SGWSLIAVGLFNSIMFPTIFSLASASLED--QASG-GSGIICTTISGGVIIPLGVGYLVDIASLRDAMFVP 394 (420)
Q Consensus 324 ~~~------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~g~~i~p~i~G~l~d~~g~~~~~~~~ 394 (420)
.+. .+.+..+-.+..++....+++..++...+ ..++ .+.......++..++.-+.+.+.|..||...|.-.
T Consensus 298 ~wl~~~~~~a~~~~~~~~L~~~~~~VaI~~~~M~~a~dGdQaGTD~T~~~~~~~~~~lia~S~~~~~~~~~GYa~~F~~~ 377 (391)
T TIGR02718 298 FWLAPGIAVAWSCSVLGSLITGITSVAILTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSILVYLTDRVGYAGGFLSG 377 (391)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 65103679999999999999899999999999862158889851277888689999999999999999752225678899
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999999
Q gi|254780843|r 395 AVCYIIIAIYGI 406 (420)
Q Consensus 395 ~~~~~~~~~~~~ 406 (420)
.+.-+.....++
T Consensus 378 ~vlavLa~~la~ 389 (391)
T TIGR02718 378 TVLAVLAILLAV 389 (391)
T ss_pred HHHHHHHHHHHH
T ss_conf 999999999985
No 212
>KOG3810 consensus
Probab=98.06 E-value=0.00012 Score=39.53 Aligned_cols=152 Identities=15% Similarity=0.124 Sum_probs=98.2
Q ss_pred HHHHHHHHHHHHHHHHHHHH---HHHHHHHH-HHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
Q ss_conf 99999999999999998738---99899999-98099989999-999999999999999999999852628999999997
Q gi|254780843|r 11 CTKIYIFILFFLFGGITSLN---SILVPKLQ-NSFSLTYLQAM-LVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLI 85 (420)
Q Consensus 11 ~~~i~i~~~ff~~g~~~~~~---~~~~p~l~-~~~~~s~~~~g-~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~ 85 (420)
|..+.+.+|. +|+..-.- +-+.|.+. .+-|+|+.|.. -+.-...-.|.+.-+|.=.+.|-.-.|++++.-.+.
T Consensus 4 W~~~~~llC~--yG~~~e~RPseP~~tpyl~gp~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls 81 (433)
T KOG3810 4 WLKITCLLCL--YGFVREFRPSEPYLTPYLLGPDKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALS 81 (433)
T ss_pred HHHHHHHHHH--HHHHHHHCCCCCCCCHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCC
T ss_conf 3320116534--26788717999733411048877744888714552024689999999999986334300036651222
Q ss_pred HHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
Q ss_conf 64321000000132024678999887775678887653100001230357887766443110000345478888864123
Q gi|254780843|r 86 MSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGN 165 (420)
Q Consensus 86 ~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 165 (420)
....-.+..+. ++.+..-+..+..|...+ ...+..+++....++++..+..+...+..-.|...|..++..++...
T Consensus 82 ~v~~w~~lv~g---~sV~~mQvlE~FyG~~tA-aEIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~ 157 (433)
T KOG3810 82 GVPVWIMLVFG---PSVKAMQVLEFFYGPATA-AEIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLE 157 (433)
T ss_pred HHHHHHHHHHC---CCCHHEEEEHHHCCHHHH-HHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 13889999856---870021320343271878-87752501445248899899998867999887677767788876011
Q ss_pred CCC
Q ss_conf 420
Q gi|254780843|r 166 LAS 168 (420)
Q Consensus 166 ~~~ 168 (420)
...
T Consensus 158 ~~s 160 (433)
T KOG3810 158 TLS 160 (433)
T ss_pred CCC
T ss_conf 023
No 213
>pfam00854 PTR2 POT family. The POT (proton-dependent oligopeptide transport) family all appear to be proton dependent transporters.
Probab=98.05 E-value=0.00012 Score=39.57 Aligned_cols=73 Identities=18% Similarity=0.030 Sum_probs=42.3
Q ss_pred HHHHHHHHH-HHHHHHHHHHHCCC-HHHHHHHHHHH----HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCH
Q ss_conf 999998738-99899999980999-89999999999----999999999999999852628999999997643210000
Q gi|254780843|r 22 LFGGITSLN-SILVPKLQNSFSLT-YLQAMLVEAIF----FSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFT 94 (420)
Q Consensus 22 ~~g~~~~~~-~~~~p~l~~~~~~s-~~~~g~i~s~~----~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~ 94 (420)
+.+..++.. +-+.|...|.|+-+ +.+..-..+.| .+|..++....+++.|++|....+.+..+.+.++.+.+.
T Consensus 41 liaiG~G~~K~nis~~~~~qy~~~~~~~~~s~F~~fY~~iNiGa~~~~~~~~~l~~~~g~~~gF~i~~v~m~~~l~~f~ 119 (372)
T pfam00854 41 LIALGTGGIKPNVSAFGADQFDETQDPRRDGFFSWFYFSINAGSLIATIITPYLQQNVGYPLGFGLPAVGMLLALLVFL 119 (372)
T ss_pred HHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 9996645701328988998679986056776888999999999998402667887722357799871579999999999
No 214
>TIGR00712 glpT glycerol-3-phosphate transporter; InterPro: IPR005267 This family includes very hydrophobic proteins, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. ; GO: 0015169 glycerol-3-phosphate transmembrane transporter activity, 0015794 glycerol-3-phosphate transport, 0016021 integral to membrane.
Probab=97.90 E-value=1.6e-05 Score=43.99 Aligned_cols=177 Identities=15% Similarity=0.016 Sum_probs=115.0
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHH
Q ss_conf 110001110001355677899998754201222-1012468889999876431001111110000000001245555456
Q gi|254780843|r 236 FTMGAVCIFLYVGAEVAIGSIMANYLMRHDTLH-LDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACS 314 (420)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (420)
.+.....++.....++..-..+..-.......| +|....+...+...+.......+.+..+||-.+|..+..+..+..+
T Consensus 27 R~QvF~GIF~GYAaYYlvR~NF~lA~PyL~~~GlfSk~eLG~~lsa~siAYG~SKFiMg~vSDRsNPR~FL~~GL~Lsa~ 106 (468)
T TIGR00712 27 RWQVFIGIFFGYAAYYLVRKNFALAIPYLVEQGLFSKAELGLVLSAVSIAYGFSKFIMGSVSDRSNPRVFLPAGLLLSAI 106 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 99999999998999999987586327056755752103578999999998645678860355676721687788999999
Q ss_pred HHHHHHHCCHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHH----HHH-
Q ss_conf 768996223368-----999999999999999999999999630--15656999999999999999999999----999-
Q gi|254780843|r 315 LVILSSYTTGFI-----SGWSLIAVGLFNSIMFPTIFSLASASL--EDQASGGSGIICTTISGGVIIPLGVG----YLV- 382 (420)
Q Consensus 315 ~~~~~~~~~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~i~p~i~G----~l~- 382 (420)
...+....+... ..+.+++.|-+.+..+|..--....-. .+|.+..|..++..++||.+-+.+.- ...
T Consensus 107 v~~l~~~~PW~TSsiaiMfv~~Fl~GWFQGMGWPPCGRTMvHW~S~~ERGt~vSiWN~AHNiGG~i~~~lv~Lg~A~F~~ 186 (468)
T TIGR00712 107 VMLLMGLVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSKSERGTIVSIWNVAHNIGGGIPAALVLLGIAIFVS 186 (468)
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 99998421403579999999999821104887988544200000235778625762152002530589999999999875
Q ss_pred ------HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf ------96-1237999999999999999999853111
Q gi|254780843|r 383 ------DI-ASLRDAMFVPAVCYIIIAIYGIYCCYKE 412 (420)
Q Consensus 383 ------d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (420)
+. -.|+.+++..+++-.+++++.+...|..
T Consensus 187 ~~g~ea~akd~W~~~ly~Pa~~Aii~a~~~~~~~RDT 223 (468)
T TIGR00712 187 THGIEAQAKDTWKSALYFPAIIAIIVALLVFLLMRDT 223 (468)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 2010022356678876447999999999998876178
No 215
>KOG2816 consensus
Probab=97.90 E-value=2.7e-05 Score=42.87 Aligned_cols=12 Identities=33% Similarity=0.634 Sum_probs=3.8
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999630
Q gi|254780843|r 342 FPTIFSLASASL 353 (420)
Q Consensus 342 ~~~~~~~~~~~~ 353 (420)
+..++....+..
T Consensus 386 ~~~i~~~t~~~~ 397 (463)
T KOG2816 386 YGNIFALTLDDL 397 (463)
T ss_pred HHHHHHHHHHHC
T ss_conf 889999988751
No 216
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.85 E-value=0.00083 Score=35.37 Aligned_cols=155 Identities=13% Similarity=0.017 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCHHHHHHH
Q ss_conf 120059999999999999999873899899999980999---8999999999999-999999999999985262899999
Q gi|254780843|r 6 ARNIQCTKIYIFILFFLFGGITSLNSILVPKLQNSFSLT---YLQAMLVEAIFFS-CYFFFSIPAGMFIQRYGYIKGICT 81 (420)
Q Consensus 6 ~k~~~~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s---~~~~g~i~s~~~~-~~~i~~~~~G~l~Dr~Grr~~l~~ 81 (420)
.|+-.-+++...++||..++.++.+ -.++|++-++ ...+.++-+...+ +..+..+..+++.+++.+++++-.
T Consensus 22 ~r~E~~kflpl~Ll~f~I~~ny~~l----R~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~ 97 (509)
T COG3202 22 RRYELKKFLPLALLFFCILFNYNLL----RSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYI 97 (509)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHH----HHHCHHEEEECCCCCCHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 3888887999999999999999999----861101686057632119999997541999999999999730789999999
Q ss_pred HHHHHHHHHHCCHHCCC-------------------CC-H---------HHHHHHHHHHHHH-HHHHHHHHHHCCHHCCC
Q ss_conf 99976432100000013-------------------20-2---------4678999887775-67888765310000123
Q gi|254780843|r 82 GLLIMSLGCILFTATIE-------------------IT-T---------FKVFLIALCILAI-GVVIIQVALNPFISLLG 131 (420)
Q Consensus 82 ~~~~~~i~~ll~~~a~~-------------------~~-~---------~~~~~~~~~i~g~-g~~~~~~~~~~~~~~~~ 131 (420)
-+..+....+++++.-. .+ . .|........... |.-...-.-.....|..
T Consensus 98 ~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeit 177 (509)
T COG3202 98 ILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEIT 177 (509)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999982350226898799998874187532577677220679999999999889999999999998861
Q ss_pred CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
Q ss_conf 035788776644311000034547888886412
Q gi|254780843|r 132 DPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLG 164 (420)
Q Consensus 132 ~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 164 (420)
..++..|..+......+.+..++..+...+...
T Consensus 178 t~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 178 TIEEAKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 098750368999999899999999999998632
No 217
>KOG3098 consensus
Probab=97.85 E-value=0.0005 Score=36.50 Aligned_cols=38 Identities=5% Similarity=0.024 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999963015656999999
Q gi|254780843|r 327 SGWSLIAVGLFNSIMFPTIFSLASASLEDQASGGSGII 364 (420)
Q Consensus 327 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (420)
..+...+.|++-+......+.......|+++..+..+.
T Consensus 356 ~~ii~~l~G~~D~~~~t~~~~ii~~~~~~~~~~~fsi~ 393 (461)
T KOG3098 356 ALIIGFLLGFGDACFNTQRYVIIALLYPDDRAQAFSLF 393 (461)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 99999997538999999999999887167438889999
No 218
>pfam05631 DUF791 Protein of unknown function (DUF791). This family consists of several eukaryotic proteins of unknown function.
Probab=97.79 E-value=0.0011 Score=34.80 Aligned_cols=36 Identities=11% Similarity=0.004 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHH
Q ss_conf 998877756788876531000012303578877664
Q gi|254780843|r 107 IALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTF 142 (420)
Q Consensus 107 ~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~ 142 (420)
...++.|.+.+...........|...+++.-.....
T Consensus 72 a~Lfv~GF~Ss~~fgt~vG~laD~~GRk~~cl~yc~ 107 (354)
T pfam05631 72 GILFIAGFGSSMLFGTIVGSLADKQGRKRACLTYCI 107 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_conf 999999988899999888888875174067999999
No 219
>TIGR00926 2A1704 Oligopeptide transporter (Peptide:H+ symporter); InterPro: IPR004768 Oligopeptide transporter, peptide:H+ symporter supports the proton-coupled intake of oligopeptides of 2 to 4 amino acids. These proteins may constitute a major route for the absorption of the end products of protein digestion.; GO: 0015198 oligopeptide transporter activity, 0006857 oligopeptide transport, 0016021 integral to membrane.
Probab=97.79 E-value=0.00014 Score=39.33 Aligned_cols=136 Identities=14% Similarity=0.157 Sum_probs=110.9
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHCCHHCCC-------
Q ss_conf 8738998999999809998999999999999999999999999985-26289999999976432100000013-------
Q gi|254780843|r 27 TSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQR-YGYIKGICTGLLIMSLGCILFTATIE------- 98 (420)
Q Consensus 27 ~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr-~Grr~~l~~~~~~~~i~~ll~~~a~~------- 98 (420)
+++=.++.-++.+.+++|+++...+.-.|..-.=+..+++..++|= +|+=|+++-..+++++|.++.++++.
T Consensus 20 YGMkavL~lYl~n~L~f~~~~sT~~fH~Ft~lcY~tPLlGsiiADg~lGKFkTI~y~S~vY~~G~v~lslgai~~l~~hd 99 (781)
T TIGR00926 20 YGMKAVLTLYLLNFLGFSESTSTVLFHAFTVLCYLTPLLGSIIADGWLGKFKTILYLSIVYAIGQVVLSLGAIPLLGSHD 99 (781)
T ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 26899999999875077832333477788899998588999996333452445420358999989998884023566666
Q ss_pred --------CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCH-HH---HHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf --------20246789998877756788876531000012303-57---887766443110000345478888864
Q gi|254780843|r 99 --------ITTFKVFLIALCILAIGVVIIQVALNPFISLLGDP-NT---AVSRLTFAQFFNSLGTAIFPYIGSVLM 162 (420)
Q Consensus 99 --------~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~-~~---r~~~~~~~~~~~~~g~~~g~~~~~~l~ 162 (420)
...-++-+.+..+.++|.|+.-|+..+.-.|-+++ ++ |.+..++.+...+.|+.+...+...+-
T Consensus 100 hdGsPnn~~~h~~ldl~GL~lIAlGTGGIKPCVSAFGGDQF~~P~q~~~~s~FFS~FYfaINAGSLiSt~iTPiLR 175 (781)
T TIGR00926 100 HDGSPNNKSLHPALDLVGLLLIALGTGGIKPCVSAFGGDQFEEPGQERMRSRFFSMFYFAINAGSLISTIITPILR 175 (781)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 7788877775157889999999985279776637887777787458999985201788898788999998625460
No 220
>KOG0252 consensus
Probab=97.59 E-value=0.0007 Score=35.76 Aligned_cols=28 Identities=14% Similarity=0.285 Sum_probs=10.5
Q ss_pred HHHHHHHHCCCCCCCCCHHHCCCHHHHH
Q ss_conf 9876431001111110000000001245
Q gi|254780843|r 281 YWGSAMIGRFIGTWILSRFSAEKTLCAF 308 (420)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
...+.+.+++..++..|+++|+++....
T Consensus 93 A~vGti~GQl~FG~lgD~~GRK~vYG~~ 120 (538)
T KOG0252 93 ALVGTIFGQLFFGWLGDKFGRKKVYGKE 120 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_conf 9988999999998888662312466678
No 221
>PRK03612 spermidine synthase; Provisional
Probab=97.57 E-value=0.0025 Score=33.02 Aligned_cols=157 Identities=11% Similarity=0.002 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH---HHHHHHHHHH
Q ss_conf 9999999999998738998999999-80999899999999999999999999999998526289999---9999764321
Q gi|254780843|r 15 YIFILFFLFGGITSLNSILVPKLQN-SFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGIC---TGLLIMSLGC 90 (420)
Q Consensus 15 ~i~~~ff~~g~~~~~~~~~~p~l~~-~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~---~~~~~~~i~~ 90 (420)
++....|+.|.+.-+.-.+.-.+.. -+|-|..|.+.+.+.|..++.+|+..+.++.|+.-.+...+ ++++......
T Consensus 18 lLl~~vfv~a~cgLvYEl~~~~l~s~llG~sv~qfsivIg~~L~~mGlGs~lar~~~~~~~~~F~~iEl~laligg~s~~ 97 (516)
T PRK03612 18 LLLASVAVCAACGLVYELLLSTLASYLLGDSVLQFSLIIGLYLFAMGVGALLSKYIRDDAAAGFVAVELLLALLGGLSAL 97 (516)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999954099999999999999999999998663000678899999999999887999
Q ss_pred HCCH-HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCH
Q ss_conf 0000-001320246789998877756788876531000012303578877664431100003454788888641234204
Q gi|254780843|r 91 ILFT-ATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASP 169 (420)
Q Consensus 91 ll~~-~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~ 169 (420)
+++. ++........+....++.|+-.|...|.......+.. .++.++..+-..+...+|..+|.++.+.+.-...+-.
T Consensus 98 ~l~~~fa~~~~~~~~l~~~~~~iG~LiG~EiPLl~rl~~~~~-~~~~~~~vg~v~a~DylGaliGsl~f~flLlP~lGl~ 176 (516)
T PRK03612 98 ILYAVFAFLGGQQLPLVLATLLIGLLIGMEIPLLMRILQRGR-DAHAGHNVATVLAADYLGALVGGLAFPFLLLPRLGLL 176 (516)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999976568999999999999998527899999998622-0022246788886764678899999999998763267
Q ss_pred HHH
Q ss_conf 677
Q gi|254780843|r 170 NTS 172 (420)
Q Consensus 170 ~~~ 172 (420)
...
T Consensus 177 ~~~ 179 (516)
T PRK03612 177 RTA 179 (516)
T ss_pred HHH
T ss_conf 899
No 222
>TIGR02332 HpaX 4-hydroxyphenylacetate permease; InterPro: IPR012707 Among the different families of transporter only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients , . This entry represents a group of MFS proteins encoded in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterised as 4-HPA permease in Escherichia coli, where 3-HPA and 3,4-dihydroxyphenylacetate, but not other substrate analogues, were shown to competitively inhibit 4-HPA transport, indicating a narrow substrate specificity ..
Probab=97.52 E-value=0.0029 Score=32.65 Aligned_cols=168 Identities=13% Similarity=0.116 Sum_probs=107.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-HHHH
Q ss_conf 531120059999999999999-9998738998999999809--99899999999999999999999999998526-2899
Q gi|254780843|r 3 DTIARNIQCTKIYIFILFFLF-GGITSLNSILVPKLQNSFS--LTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYG-YIKG 78 (420)
Q Consensus 3 ~~~~k~~~~~~i~i~~~ff~~-g~~~~~~~~~~p~l~~~~~--~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G-rr~~ 78 (420)
+++.|+..-..++++.+-+.+ .-..+.++.--|++-+.|| -|+-.+|++.++..++..++.+.+.+-+||.- ||+-
T Consensus 233 rs~~re~~tP~~m~ytlayfCltntlsai~iWtPqilqsfn~Gssni~iGllaa~Pq~Cti~Gm~~Wsr~sdr~~er~~h 312 (412)
T TIGR02332 233 RSTLREVLTPVVMLYTLAYFCLTNTLSAISIWTPQILQSFNTGSSNITIGLLAAVPQICTILGMVYWSRRSDRLKERKKH 312 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_conf 56788987789999999999987667666431247888740463267888997677899998778741003456654431
Q ss_pred HHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf 99999976432100000013202467899988777567888765310000123035788776644311000034547888
Q gi|254780843|r 79 ICTGLLIMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIG 158 (420)
Q Consensus 79 l~~~~~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 158 (420)
-..--+..+.|-++. -+ .-++...+ ........|.-.......+.-.+...-+.|.-.+...++..++|+.+.|.+.
T Consensus 313 t~lPylfaaaGWlla-sa-tdh~~iq~-~~iimas~Gsf~am~ifWttPdq~isl~~ra~~~avina~Gn~Gsa~sP~~i 389 (412)
T TIGR02332 313 TILPYLFAAAGWLLA-SA-TDHSLIQL-LSIIMASTGSFSAMAIFWTTPDQVISLRARAVAIAVINAVGNVGSALSPLLI 389 (412)
T ss_pred HHHHHHHHHHHHHHH-HH-HHHHHHHH-HHHHHHHCCHHHHHHHEECCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 013689988888887-53-00469999-9999862002444321020776212112445454443410321246779999
Q ss_pred HHHHHCCCCCHHHHH
Q ss_conf 886412342046776
Q gi|254780843|r 159 SVLMLGNLASPNTSM 173 (420)
Q Consensus 159 ~~l~~~~~~~~~~~~ 173 (420)
+.+-+..+......+
T Consensus 390 G~lkd~tGsf~sGlW 404 (412)
T TIGR02332 390 GILKDLTGSFSSGLW 404 (412)
T ss_pred HHHHHHCCCCCHHHH
T ss_conf 998740244002499
No 223
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter; InterPro: IPR004745 Na(+)-dependent inorganic phosphate cotransporter proteins belong to this group. The mammalian proteins are important for the resorption of phosphate by the kidney and may be involved in actively transporting phosphate into cells via sodium ion cotransport in the renal brush border membrane.; GO: 0015114 phosphate transmembrane transporter activity, 0006817 phosphate transport, 0016021 integral to membrane.
Probab=97.34 E-value=0.005 Score=31.47 Aligned_cols=151 Identities=9% Similarity=0.132 Sum_probs=97.9
Q ss_pred HHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHH----HHHHHHHH
Q ss_conf 42012221012468889999876431001111110000000001245555456768996223368999----99999999
Q gi|254780843|r 262 MRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYTTGFISGW----SLIAVGLF 337 (420)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~g~~ 337 (420)
.....+..+...-|.+.+....+......-.++..++++.++++.....+..+..++.+.....-..+ .=++-|++
T Consensus 82 y~~~~f~Ws~~~QG~ilSS~fyG~~~~qiP~G~la~~Y~~k~~iG~~~~~~~v~~~liP~aA~~g~~~G~~~~Rv~qG~~ 161 (514)
T TIGR00894 82 YKNPEFNWSEDQQGLILSSFFYGSVIIQIPVGYLAGKYGTKKVIGFALLLSSVLSFLIPIAAGVGFAWGVIVLRVLQGIG 161 (514)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHEEEEEECCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHH
T ss_conf 68888478677636887566661252341603563140437999999999999998746554121011023453212012
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHH-HHHHHHHHHHH
Q ss_conf 999999999999963015-65699999999-9999999999999999961------237999999999-99999999985
Q gi|254780843|r 338 NSIMFPTIFSLASASLED-QASGGSGIICT-TISGGVIIPLGVGYLVDIA------SLRDAMFVPAVC-YIIIAIYGIYC 408 (420)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~g~~i~p~i~G~l~d~~------g~~~~~~~~~~~-~~~~~~~~~~~ 408 (420)
.+...|....+..+-.|+ +++...+.... ..+|..+.=++.|++.|.. ||...|++..++ +++..++.++.
T Consensus 162 ~G~~~p~~h~l~~KW~PP~ER~r~~s~~~sG~~~G~~i~lp~~G~i~~~~GskF~~GWP~vFYifGivG~~~~~~W~~l~ 241 (514)
T TIGR00894 162 QGLVSPAQHELLAKWIPPNERSRLTSAVLSGFQLGTFIVLPISGLICESDGSKFLLGWPMVFYIFGIVGTAVSIAWFVLV 241 (514)
T ss_pred HHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 33114643022663058875057999986268898999986304555356740147761467788999999999989873
Q ss_pred HHHH
Q ss_conf 3111
Q gi|254780843|r 409 CYKE 412 (420)
Q Consensus 409 ~~~~ 412 (420)
..+.
T Consensus 242 ~D~P 245 (514)
T TIGR00894 242 YDDP 245 (514)
T ss_pred CCCC
T ss_conf 1375
No 224
>TIGR00901 2A0125 AmpG-related permease; InterPro: IPR004752 The signal transducer encoded by ampG is essential for induction of chromosomal AmpC beta-lactamase in Escherichia coli by beta-lactam antibiotics and 'unspecific' inducers . The ampG protein probably acts as a permease in the beta-lactamase induction system and in peptidoglycan recycling..
Probab=97.33 E-value=0.005 Score=31.47 Aligned_cols=138 Identities=10% Similarity=0.025 Sum_probs=105.0
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----C----HHHH-HHHHHHHHHHHHHCCHHC
Q ss_conf 87389989999998099989999999999999999999999999852-----6----2899-999999764321000000
Q gi|254780843|r 27 TSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRY-----G----YIKG-ICTGLLIMSLGCILFTAT 96 (420)
Q Consensus 27 ~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~-----G----rr~~-l~~~~~~~~i~~ll~~~a 96 (420)
..+.+-.+|..-++=|+|..++|...-+ ...| -....+.++.|++ | |||. ++.+.....+..+.+++.
T Consensus 4 l~l~~~~lp~wL~~~~v~~~~iG~~S~~-~lpY-slKfLWsPl~D~~~~~~~G~~~GRRrsWl~~tq~~L~~~l~~~s~~ 81 (531)
T TIGR00901 4 LMLVGNTLPVWLRSKNVSLKTIGFFSLV-GLPY-SLKFLWSPLLDTYYLPFLGKLLGRRRSWLVLTQVLLLLLLLILSFL 81 (531)
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHH-HHHH-HHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 1107632887740206788899999999-9999-9999972013622456366414530468999999999999999722
Q ss_pred CC---------CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
Q ss_conf 13---------20246789998877756788876531000012303578877664431100003454788888641234
Q gi|254780843|r 97 IE---------ITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNL 166 (420)
Q Consensus 97 ~~---------~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 166 (420)
.. .+....+....++..+.++.-..+..++-.|..++|+++...+....+...|..++..+.-.+.+...
T Consensus 82 ~P~~~~~tDD~~~~l~~l~~~a~L~~F~SAtQDI~~DA~r~~il~~e~lG~~s~~~~~Gyr~g~Ll~~~l~L~La~~~~ 160 (531)
T TIGR00901 82 DPRLLSKTDDRSTDLPLLAGLAFLIAFFSATQDIVLDAWRLEILSDEELGYGSTIYIVGYRVGMLLAGSLALVLASALF 160 (531)
T ss_pred CCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8620003678874299999999999998542557877466621684556788999999999999988799999974764
No 225
>KOG2325 consensus
Probab=97.30 E-value=0.0039 Score=31.99 Aligned_cols=56 Identities=13% Similarity=0.139 Sum_probs=34.2
Q ss_pred HHHHHHHHHH-HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999996301-5656999999-999999999999999999961237999999999999
Q gi|254780843|r 345 IFSLASASLE-DQASGGSGII-CTTISGGVIIPLGVGYLVDIASLRDAMFVPAVCYII 400 (420)
Q Consensus 345 ~~~~~~~~~~-~~~~~~~~~~-~~~~~g~~i~p~i~G~l~d~~g~~~~~~~~~~~~~~ 400 (420)
..++..+..+ ++++...+.. .....+..++|.+.-......|+++.+.+....+++
T Consensus 409 ~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~ 466 (488)
T KOG2325 409 LDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLV 466 (488)
T ss_pred HHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf 8889998718855553168999503134401178876567752851799999999999
No 226
>KOG2563 consensus
Probab=97.23 E-value=0.0034 Score=32.28 Aligned_cols=65 Identities=17% Similarity=0.072 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Q ss_conf 99999999999999999999996301565-6-9999999999999999999999999612-3799999
Q gi|254780843|r 329 WSLIAVGLFNSIMFPTIFSLASASLEDQA-S-GGSGIICTTISGGVIIPLGVGYLVDIAS-LRDAMFV 393 (420)
Q Consensus 329 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~g~~i~p~i~G~l~d~~g-~~~~~~~ 393 (420)
+.+...|++.+..+.....+.....++.. + .++.......++|.++..+.|.+.|.+. ++....+
T Consensus 270 il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v 337 (480)
T KOG2563 270 ILAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLV 337 (480)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999853289999999984421012667742243567999998899998887544355358999999
No 227
>TIGR00882 2A0105 oligosaccharide:H+ symporter; InterPro: IPR000576 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) . The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli .; GO: 0005403 hydrogen:sugar symporter activity, 0006810 transport, 0016020 membrane.
Probab=97.11 E-value=0.0029 Score=32.64 Aligned_cols=161 Identities=11% Similarity=0.038 Sum_probs=89.5
Q ss_pred HHHHHHHHHHH-HHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHH-HHHHCCHHHH--
Q ss_conf 77899998754-2012221012468889999876431001111110000000001245555456768-9962233689--
Q gi|254780843|r 252 AIGSIMANYLM-RHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVI-LSSYTTGFIS-- 327 (420)
Q Consensus 252 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-- 327 (420)
....+.|.+.. ..+..|.+....|...+......+.-.+..+.+.||.+-||-++-......+... ...+...+..
T Consensus 17 im~~~fpf~piWL~~~~gl~kt~tGi~fs~~sl~si~Fqp~~G~~sDkLGLkK~LlW~is~lLvlfaPFfiyVf~PLL~~ 96 (397)
T TIGR00882 17 IMSAYFPFFPIWLKDVNGLTKTETGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISLLLVLFAPFFIYVFAPLLQS 96 (397)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99988533477884225477763577888899999987666400201235506899999999998615998986779998
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf --9999999999999999999999963015656999-----999999999999999999999961237999999999999
Q gi|254780843|r 328 --GWSLIAVGLFNSIMFPTIFSLASASLEDQASGGS-----GIICTTISGGVIIPLGVGYLVDIASLRDAMFVPAVCYII 400 (420)
Q Consensus 328 --~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~g~~i~p~i~G~l~d~~g~~~~~~~~~~~~~~ 400 (420)
......-|+..|..+..--... |..-|+.++.+ -.-+.+.+|-++...+.|.+.+ .+.+..||+...+-++
T Consensus 97 Ni~~G~l~Gg~y~G~~f~AG~Ga~-eayiEkvsR~~~FEYG~aR~fGc~GwAlcA~~~GIlF~-i~p~~~FWl~S~~a~~ 174 (397)
T TIGR00882 97 NILVGALVGGLYLGFVFSAGAGAI-EAYIEKVSRNSNFEYGKARMFGCVGWALCASIAGILFS-IDPSIVFWLGSGFALI 174 (397)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCHH-HHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHCCEEEE-CCCCHHHHHHHHHHHH
T ss_conf 999999986999877873257346-88897875247984001788872137877653030030-0664145788999999
Q ss_pred HHHHHHHHHHHHHC
Q ss_conf 99999985311102
Q gi|254780843|r 401 IAIYGIYCCYKENN 414 (420)
Q Consensus 401 ~~~~~~~~~~~~~~ 414 (420)
..+.......|.++
T Consensus 175 l~~ll~~~k~~~~~ 188 (397)
T TIGR00882 175 LMLLLMVAKPKSSD 188 (397)
T ss_pred HHHHHHHHCCCCCC
T ss_conf 99999761699872
No 228
>pfam03092 BT1 BT1 family. Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters. One such protein, previously termed (and is still annotated as) ORFG, was shown to encode a biopterin transport protein using null mutants, thus being subsequently renamed BT1. The significant similarity of ORFG/BT1 to Trypanosoma brucei ESAG10 (a putative transmembrane protein and another member of this family) was previously noted. This family also contains five putative Arabidopsis thaliana proteins of unknown function. In addition, it also contains two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.10 E-value=0.0094 Score=30.10 Aligned_cols=44 Identities=5% Similarity=-0.143 Sum_probs=34.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
Q ss_conf 99899999999999999999999999998526289999999976
Q gi|254780843|r 43 LTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIM 86 (420)
Q Consensus 43 ~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~ 86 (420)
......++......+|..+++..+|.+.|+++.|..+.+...+-
T Consensus 121 ~~~~lqS~~~~~~~~G~ll~~~lsG~l~~~~~~~~~f~i~~~lp 164 (425)
T pfam03092 121 AGPSLVSWIWGCSAVGGIIGSVLSGPLLDTFKPQISFLVTAALQ 164 (425)
T ss_pred CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 45440009999999999999999999998558427899999999
No 229
>pfam03137 OATP Organic Anion Transporter Polypeptide (OATP) family. This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules). Thus, Tamai et al. initiated the current scheme of using digits for rat OATPs and letters for human ones. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. Thi
Probab=96.98 E-value=0.012 Score=29.52 Aligned_cols=38 Identities=18% Similarity=0.259 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHH-HHH--HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99963015656999-999--999999999999999999961
Q gi|254780843|r 348 LASASLEDQASGGS-GII--CTTISGGVIIPLGVGYLVDIA 385 (420)
Q Consensus 348 ~~~~~~~~~~~~~~-~~~--~~~~~g~~i~p~i~G~l~d~~ 385 (420)
...+.+|++.+..+ ++. ....+|..-+|.+.|.+.|..
T Consensus 518 i~LR~V~~~~rs~ALG~~~~~~rllg~IPgPIifG~iiD~t 558 (582)
T pfam03137 518 LVLRCVPPEEKSLALGVQSLLIRLLGFIPAPIIFGALIDST 558 (582)
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 88864580105699999999999985481899985998703
No 230
>TIGR00901 2A0125 AmpG-related permease; InterPro: IPR004752 The signal transducer encoded by ampG is essential for induction of chromosomal AmpC beta-lactamase in Escherichia coli by beta-lactam antibiotics and 'unspecific' inducers . The ampG protein probably acts as a permease in the beta-lactamase induction system and in peptidoglycan recycling..
Probab=96.51 E-value=0.029 Score=27.64 Aligned_cols=60 Identities=15% Similarity=0.084 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHC
Q ss_conf 99999999999998738998999999809998999999999999999999999999----98526
Q gi|254780843|r 14 IYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMF----IQRYG 74 (420)
Q Consensus 14 i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l----~Dr~G 74 (420)
..+....|++.|......+++...+.|- +++.+.|...+++..||=++.+++|-+ +|+..
T Consensus 97 ~~l~~~a~L~~F~SAtQDI~~DA~r~~i-l~~e~lG~~s~~~~~Gyr~g~Ll~~~l~L~La~~~~ 160 (531)
T TIGR00901 97 PLLAGLAFLIAFFSATQDIVLDAWRLEI-LSDEELGYGSTIYIVGYRVGMLLAGSLALVLASALF 160 (531)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999998542557877466621-684556788999999999999988799999974764
No 231
>TIGR00788 fbt folate/biopterin transporter; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters , . This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).; GO: 0016020 membrane.
Probab=96.32 E-value=0.038 Score=27.03 Aligned_cols=168 Identities=14% Similarity=0.111 Sum_probs=112.3
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---C--HHHHHHHHHHHH
Q ss_conf 99999999999999873-89989999998099989999999999999999999999999852---6--289999999976
Q gi|254780843|r 13 KIYIFILFFLFGGITSL-NSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRY---G--YIKGICTGLLIM 86 (420)
Q Consensus 13 ~i~i~~~ff~~g~~~~~-~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~---G--rr~~l~~~~~~~ 86 (420)
+-.....+|.-|...++ --+..|.++++|+++..+..-+.+.+.+++.+ .+..|..+|-+ | ||.-.+.+.+.-
T Consensus 33 lA~~l~~lF~kG~~~gl~r~~~~~~l~~~l~l~~a~~~~~~g~~~lg~~~-~~~~~~~~d~f~LfGY~~R~y~v~s~l~g 111 (594)
T TIGR00788 33 LAIILLVLFVKGIAHGLIRLALSPMLTDDLGLDGARYQRLTGLSSLGWAL-KPLAGVLSDLFPLFGYTKRWYLVLSGLLG 111 (594)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCHHHHHEECCCCHHHHHHCCCHHHHHHHH-HHHHHHHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf 89899998742026322331011221000024467673136222188899-99999999751377742378899889999
Q ss_pred -HHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC---HHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf -4321000000132024678999887775678887653100001230---357887766443110000345478888864
Q gi|254780843|r 87 -SLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGD---PNTAVSRLTFAQFFNSLGTAIFPYIGSVLM 162 (420)
Q Consensus 87 -~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~---~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 162 (420)
.++.....++....+....-...++..+..+...........+... +...+...++.......|.+++..+.|.+.
T Consensus 112 ~~~a~~~~~L~~~~~~~~~a~~~~~l~~l~~~~~Dv~~~~~~~~~~R~~~~~~gpsL~S~~w~~~~~G~~~~s~l~G~L~ 191 (594)
T TIGR00788 112 STVAILYGLLPGKVSSAKVAALLIFLAALSKALSDVLVDSLYVERIRQESPSAGPSLVSLVWGASALGGLISSLLSGPLL 191 (594)
T ss_pred HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999996403310258899999999998644677888887755541013225651689999999988999975441110
Q ss_pred HCCCCCHHHHHHHHHHHHH
Q ss_conf 1234204677655555778
Q gi|254780843|r 163 LGNLASPNTSMLADTMKDY 181 (420)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~ 181 (420)
+.......+.........-
T Consensus 192 ~~~~~r~~f~i~a~l~ll~ 210 (594)
T TIGR00788 192 DKTLTRILFLITAALLLLQ 210 (594)
T ss_pred CCCCCEEEEHHHHHHHHHH
T ss_conf 2678524412877889999
No 232
>pfam06813 Nodulin-like Nodulin-like. This family represents a conserved region within plant nodulin-like proteins.
Probab=96.28 E-value=0.04 Score=26.93 Aligned_cols=116 Identities=7% Similarity=-0.111 Sum_probs=63.1
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCH------HH--HHHHHHHHHH
Q ss_conf 122210124688899998764310011111100000000012455554567689962233------68--9999999999
Q gi|254780843|r 265 DTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYTTG------FI--SGWSLIAVGL 336 (420)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~--~~~~~~~~g~ 336 (420)
..+++++.+...+....-.+...+ ...+...|+.++..+..................-. +. ......+.+.
T Consensus 30 ~~l~~sQ~qL~~ls~a~d~G~~~G-~~~G~~~d~~pp~~vlliGa~~~~~GY~l~wL~v~~~i~~~~~~~~~l~~~l~~n 108 (248)
T pfam06813 30 SSLGYSQVQLNLLGVAKDLGKNFG-WLSGLAAEYLPPWVVLLVGAAMGFVGYGVQWLAVTGKIPGLPYWLLCLAICLAGN 108 (248)
T ss_pred HHHCCCHHHHHHHHHHHHHHHHCC-HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHC
T ss_conf 770989999999999999887706-6589998232669999999999999999999997282378989999999999827
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Q ss_conf 999999999999996301565699999999-999999999999999
Q gi|254780843|r 337 FNSIMFPTIFSLASASLEDQASGGSGIICT-TISGGVIIPLGVGYL 381 (420)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~i~p~i~G~l 381 (420)
+.+...........+.+|++++.+.++.-. ..+++++-..+.-.+
T Consensus 109 s~~~~nTa~lvt~v~nFP~~RG~vvgilK~f~GLs~AI~t~iy~a~ 154 (248)
T pfam06813 109 SICWFNTASLVTCIRNFPESRGVVLGILKGYAGLSAAIYTQLYTAI 154 (248)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf 8404315578888874743345267888776011299999999998
No 233
>TIGR00788 fbt folate/biopterin transporter; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters , . This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).; GO: 0016020 membrane.
Probab=96.09 E-value=0.051 Score=26.40 Aligned_cols=56 Identities=14% Similarity=-0.045 Sum_probs=43.7
Q ss_pred HHHHH-HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
Q ss_conf 99999-980999899999999999999999999999998526289999999976432
Q gi|254780843|r 34 VPKLQ-NSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLG 89 (420)
Q Consensus 34 ~p~l~-~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~ 89 (420)
...++ +.=..+.+-.+|.-.+...|..+++.+.|+|.|+...|-.+.+...+-.+.
T Consensus 154 ~~~~R~~~~~~gpsL~S~~w~~~~~G~~~~s~l~G~L~~~~~~r~~f~i~a~l~ll~ 210 (594)
T TIGR00788 154 VERIRQESPSAGPSLVSLVWGASALGGLISSLLSGPLLDKTLTRILFLITAALLLLQ 210 (594)
T ss_pred HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHH
T ss_conf 555410132256516899999999889999754411102678524412877889999
No 234
>KOG3880 consensus
Probab=95.94 E-value=0.061 Score=26.02 Aligned_cols=140 Identities=15% Similarity=0.067 Sum_probs=74.6
Q ss_pred HHHHHHHHHHHHHH-----HHHHHHHHHHHHC---------CC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
Q ss_conf 99999999999873-----8998999999809---------99-----89999999999999999999999999852628
Q gi|254780843|r 16 IFILFFLFGGITSL-----NSILVPKLQNSFS---------LT-----YLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYI 76 (420)
Q Consensus 16 i~~~ff~~g~~~~~-----~~~~~p~l~~~~~---------~s-----~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr 76 (420)
+...|.+.|+.++. ++.+...+.++-+ .| .-..|.+.-+--+...+-.+.+..+.||+-.-
T Consensus 13 ~~~~FwllGLcNN~~YVvmLSAA~DIl~~~~~~~~~~c~~h~~~r~c~~~stg~VLLaDilPsL~iKl~~Pff~~rfpf~ 92 (409)
T KOG3880 13 IAVAFWLLGLCNNYGYVVMLSAAEDILSEQVSDPGPTCIPHNSGRECQSVSTGAVLLADILPSLAIKLTAPFFIHRFPFG 92 (409)
T ss_pred CCHHHHHHHHHCCCCEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHCCCC
T ss_conf 20599999872554157652345665433358888876555565435554311010230207899997031223215640
Q ss_pred HHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHH
Q ss_conf 99999999764321000000132024678999887775678887653100001230357887766443110000345478
Q gi|254780843|r 77 KGICTGLLIMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPY 156 (420)
Q Consensus 77 ~~l~~~~~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 156 (420)
+=..+..++.+.+.++.+++ ++.+.-+.+..+..++.|........+.+. +....++.+.++.+..+.+|..
T Consensus 93 ~Ri~~~v~~sa~s~~lVafs---~s~~~sL~GV~~aSissGlGEiTFL~lss~-----Y~~~~i~~WSSGTGgAGliGa~ 164 (409)
T KOG3880 93 FRIALVVLLSALSFFLVAFS---NSVPMSLLGVVFASISSGLGEITFLALSSR-----YPSIVIAGWSSGTGGAGLIGAS 164 (409)
T ss_pred HHHHHHHHHHHCCEEEEEEC---CCHHHHHHHHHHHHHCCCCCEEEHHHHHCC-----CCCCEECCCCCCCCCCHHHHHH
T ss_conf 58999999975042898860---413588761555644178640013335312-----7773222213788864055356
Q ss_pred HHHHHHH
Q ss_conf 8888641
Q gi|254780843|r 157 IGSVLML 163 (420)
Q Consensus 157 ~~~~l~~ 163 (420)
--..+..
T Consensus 165 SYa~lT~ 171 (409)
T KOG3880 165 SYAFLTS 171 (409)
T ss_pred HHHHHHH
T ss_conf 7888750
No 235
>KOG1237 consensus
Probab=95.87 E-value=0.065 Score=25.87 Aligned_cols=154 Identities=20% Similarity=0.132 Sum_probs=101.4
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHCCHHCCCCC------
Q ss_conf 7389989999998099989999999999999999999999999852-628999999997643210000001320------
Q gi|254780843|r 28 SLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRY-GYIKGICTGLLIMSLGCILFTATIEIT------ 100 (420)
Q Consensus 28 ~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~-Grr~~l~~~~~~~~i~~ll~~~a~~~~------ 100 (420)
++...++..+.++++.+..++.-..+.+........+..+.++|-| ||-+++.++.++..+|..+....+..+
T Consensus 55 g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~ 134 (571)
T KOG1237 55 GLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFM 134 (571)
T ss_pred CCHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 21157999989985645154777876220168888889999887884899999999999999999999987415406853
Q ss_pred ----------------HHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC---HHH-HH--HHHHHHHHHCCCHHHHHHHHH
Q ss_conf ----------------24678999887775678887653100001230---357-88--776644311000034547888
Q gi|254780843|r 101 ----------------TFKVFLIALCILAIGVVIIQVALNPFISLLGD---PNT-AV--SRLTFAQFFNSLGTAIFPYIG 158 (420)
Q Consensus 101 ----------------~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~---~~~-r~--~~~~~~~~~~~~g~~~g~~~~ 158 (420)
....+....-...+|.+..-+...+.-.|-++ +++ +. ..++++....+.|..++..+.
T Consensus 135 ~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~ 214 (571)
T KOG1237 135 CKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVL 214 (571)
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 24677777677730789999999998853465756673532144324666733122252236799999999999999988
Q ss_pred HHHHHCCCCCHHHHHHHHHHHHHH
Q ss_conf 886412342046776555557789
Q gi|254780843|r 159 SVLMLGNLASPNTSMLADTMKDYQ 182 (420)
Q Consensus 159 ~~l~~~~~~~~~~~~~~~~~~~~~ 182 (420)
...-+ ..+|..............
T Consensus 215 vyiq~-~~~w~lgf~i~~~~~~la 237 (571)
T KOG1237 215 VYIQD-NVGWKLGFGIPTVLNALA 237 (571)
T ss_pred HHHHH-CCCCEECCCHHHHHHHHH
T ss_conf 67653-374011146369999999
No 236
>pfam02487 CLN3 CLN3 protein. This is a family of proteins from the CLN3 gene. A missense mutation of glutamic acid (E) to lysine (K) at position 295 in the human protein has been implicated in Juvenile neuronal ceroid lipofuscinosis (Batten disease).
Probab=95.87 E-value=0.03 Score=27.59 Aligned_cols=33 Identities=9% Similarity=0.093 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999996301565699
Q gi|254780843|r 328 GWSLIAVGLFNSIMFPTIFSLASASLEDQASGG 360 (420)
Q Consensus 328 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (420)
....+..|+..|..+...+....+..|++.+..
T Consensus 346 f~lif~eGLlGGa~YVNtF~~I~~~v~~~~rEF 378 (409)
T pfam02487 346 FLLILFEGLLGGASYVNTFHNIHKEVDPDVREF 378 (409)
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHCCCCHHHEEE
T ss_conf 999999874352677748898750298767130
No 237
>pfam01733 Nucleoside_tran Nucleoside transporter. This is a family of nucleoside transporters. In mammalian cells nucleoside transporters transport nucleoside across the plasma membrane and are essential for nucleotide synthesis via the salvage pathways for cells that lack their own de novo synthesis pathways. Also in this family is mouse and human nucleolar protein HNP36, a protein of unknown function; although it has been hypothesized to be a plasma membrane nucleoside transporter.
Probab=95.79 E-value=0.071 Score=25.69 Aligned_cols=99 Identities=9% Similarity=0.107 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHH--HHHHH------------HCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99998764310011111100000000012455554567--68996------------22336899999999999999999
Q gi|254780843|r 278 TAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSL--VILSS------------YTTGFISGWSLIAVGLFNSIMFP 343 (420)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------------~~~~~~~~~~~~~~g~~~~~~~~ 343 (420)
...+..+...+|....+..-+..+.+.+......-.+. ..+.. ..+.+...+...++|+.+|-...
T Consensus 184 fl~fN~gD~vGR~l~~~~~~~~~~~~~l~~~s~~R~~FiPlf~lcn~~p~~~~~~~~~~~d~~~~i~~~lfglTNGyl~t 263 (305)
T pfam01733 184 FLLFNLFDLLGRSLAAWFMWPGQDPRWLPVLSILRLLFIPLFLLCNYKPQSRALPVFFESDWLFIILMALFAFSNGYLSS 263 (305)
T ss_pred HHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHCCHHHH
T ss_conf 99999999975565421324689955058999999999999999806877777771035769999999999984218862
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHH-HHHHHHHH
Q ss_conf 99999996301565-69999999999-99999999
Q gi|254780843|r 344 TIFSLASASLEDQA-SGGSGIICTTI-SGGVIIPL 376 (420)
Q Consensus 344 ~~~~~~~~~~~~~~-~~~~~~~~~~~-~g~~i~p~ 376 (420)
.......+..+++. ..++..+.... .|-+.|..
T Consensus 264 l~m~~~P~~v~~~e~e~aG~~m~f~L~~Gl~~Gs~ 298 (305)
T pfam01733 264 LAMMYAPKQVPPHEAETAGMITVFFLILGLALGSV 298 (305)
T ss_pred HHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 11333899899899999999999999999999999
No 238
>KOG3097 consensus
Probab=95.70 E-value=0.078 Score=25.49 Aligned_cols=79 Identities=11% Similarity=0.144 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCH
Q ss_conf 99999999999999999852628999999997643210000001320246789998877756788876531000012303
Q gi|254780843|r 54 IFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDP 133 (420)
Q Consensus 54 ~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~ 133 (420)
..+......++..+.+..++|.|.++.++...+.. +..+...+.|..+.-.....|.+.+..+.+..+++.+....
T Consensus 66 ~~y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~l----yiA~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ 141 (390)
T KOG3097 66 ALYLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYAL----YIAANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQN 141 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHCCHHHHHHCCHHHHHCCCCCCCCCCCCCEECHHHHH
T ss_conf 31077877878899999997169999999988888----88730224677524077761256466554675164277788
Q ss_pred HHH
Q ss_conf 578
Q gi|254780843|r 134 NTA 136 (420)
Q Consensus 134 ~~r 136 (420)
...
T Consensus 142 ya~ 144 (390)
T KOG3097 142 YAN 144 (390)
T ss_pred HHH
T ss_conf 877
No 239
>TIGR00926 2A1704 Oligopeptide transporter (Peptide:H+ symporter); InterPro: IPR004768 Oligopeptide transporter, peptide:H+ symporter supports the proton-coupled intake of oligopeptides of 2 to 4 amino acids. These proteins may constitute a major route for the absorption of the end products of protein digestion.; GO: 0015198 oligopeptide transporter activity, 0006857 oligopeptide transport, 0016021 integral to membrane.
Probab=95.61 E-value=0.066 Score=25.86 Aligned_cols=79 Identities=18% Similarity=0.182 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH-H----HHHHHHHHHHHHHHHHHHHHHH-HHH--H-----HHHHH
Q ss_conf 899999999999999999999999963015-6569-9----9999999999999999999999-961--2-----37999
Q gi|254780843|r 326 ISGWSLIAVGLFNSIMFPTIFSLASASLED-QASG-G----SGIICTTISGGVIIPLGVGYLV-DIA--S-----LRDAM 391 (420)
Q Consensus 326 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~-~----~~~~~~~~~g~~i~p~i~G~l~-d~~--g-----~~~~~ 391 (420)
...+++.+++++.|++-|.+.+..-|.+++ +... . |.+...-+.|+.+.-.+...+- |.. | |..||
T Consensus 113 ldl~GL~lIAlGTGGIKPCVSAFGGDQF~~P~q~~~~s~FFS~FYfaINAGSLiSt~iTPiLR~~~~CfGs~~~CypLAF 192 (781)
T TIGR00926 113 LDLVGLLLIALGTGGIKPCVSAFGGDQFEEPGQERMRSRFFSMFYFAINAGSLISTIITPILRGSVKCFGSQQDCYPLAF 192 (781)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCCCCCCCCHHC
T ss_conf 88999999998527977663788777778745899998520178889878899999862546000245588854342003
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999999
Q gi|254780843|r 392 FVPAVCYIIIAIY 404 (420)
Q Consensus 392 ~~~~~~~~~~~~~ 404 (420)
-++++.++++.+.
T Consensus 193 GvPaiLMi~Aliv 205 (781)
T TIGR00926 193 GVPAILMIVALIV 205 (781)
T ss_pred CHHHHHHHHHHHH
T ss_conf 4168999999999
No 240
>KOG4830 consensus
Probab=88.59 E-value=0.41 Score=21.85 Aligned_cols=48 Identities=13% Similarity=0.004 Sum_probs=33.8
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHCHHHHH
Q ss_conf 9899999980999899999999999999999999999---------99852628999
Q gi|254780843|r 32 ILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGM---------FIQRYGYIKGI 79 (420)
Q Consensus 32 ~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~---------l~Dr~Grr~~l 79 (420)
..+-...++.+++++....+.-+-...-++..++.|. -.||+|||+..
T Consensus 38 TYlllfltqiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~w 94 (412)
T KOG4830 38 TYLLLFLTQIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMSW 94 (412)
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCEEEE
T ss_conf 999999998637830258998756777787433001225455048886220434132
No 241
>pfam07672 MFS_Mycoplasma Mycoplasma MFS transporter. These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=76.11 E-value=3.6 Score=17.15 Aligned_cols=22 Identities=18% Similarity=-0.056 Sum_probs=11.2
Q ss_pred CCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 1111222111111100011100
Q gi|254780843|r 224 FLKTLDILANPRFTMGAVCIFL 245 (420)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~ 245 (420)
..+..+..|++..+........
T Consensus 82 ~~s~~~~LK~K~Tw~~~l~yG~ 103 (265)
T pfam07672 82 KPSALSILKNKETWKLILIYGI 103 (265)
T ss_pred CCCHHHHHCCCHHHHHHHHHHH
T ss_conf 7208888567137788999856
No 242
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=72.72 E-value=4.4 Score=16.69 Aligned_cols=78 Identities=15% Similarity=0.122 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCHHHHHHH
Q ss_conf 11200599999999999999998738998999999809998999999999999999999999999985---262899999
Q gi|254780843|r 5 IARNIQCTKIYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQR---YGYIKGICT 81 (420)
Q Consensus 5 ~~k~~~~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr---~Grr~~l~~ 81 (420)
.+|+..+.++ +...|++.-+..+...--+.-+.|.++......++..+...... +.+-.++ ||.||.=+.
T Consensus 20 ~~r~l~~~~~-L~~~f~~iE~i~g~~s~SlaLLADa~Hml~D~~al~lal~A~~~------a~r~~~~~~TfGy~R~eiL 92 (296)
T COG1230 20 NERRLLIALL-LNLAFMLIEIIGGLLTGSLALLADALHMLSDALALLLALIAIKL------ARRPATKRFTFGYKRLEIL 92 (296)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH------HCCCCCCCCCCCHHHHHHH
T ss_conf 7889999999-99999999999999965699997377788999999999999998------4177778777307689999
Q ss_pred HHHHHHHH
Q ss_conf 99976432
Q gi|254780843|r 82 GLLIMSLG 89 (420)
Q Consensus 82 ~~~~~~i~ 89 (420)
+....++.
T Consensus 93 aa~~nav~ 100 (296)
T COG1230 93 AAFLNALL 100 (296)
T ss_pred HHHHHHHH
T ss_conf 99999999
No 243
>PRK10580 proY putative proline-specific permease; Provisional
Probab=60.60 E-value=8.1 Score=15.39 Aligned_cols=23 Identities=22% Similarity=0.325 Sum_probs=13.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 75311200599999999999999
Q gi|254780843|r 2 KDTIARNIQCTKIYIFILFFLFG 24 (420)
Q Consensus 2 ~~~~~k~~~~~~i~i~~~ff~~g 24 (420)
||+++|+.+..-+....+--+.|
T Consensus 4 ~~~LkR~L~~~~l~~i~iG~~IG 26 (457)
T PRK10580 4 KNKLKRGLSTRHIRFMALGSAIG 26 (457)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 76455889788989999998998
No 244
>COG2119 Predicted membrane protein [Function unknown]
Probab=54.53 E-value=10 Score=14.84 Aligned_cols=34 Identities=9% Similarity=0.052 Sum_probs=17.9
Q ss_pred HHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHH
Q ss_conf 8764310011111100000000012455554567
Q gi|254780843|r 282 WGSAMIGRFIGTWILSRFSAEKTLCAFATTACSL 315 (420)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (420)
..+.......+.+..+|...+.+......+....
T Consensus 144 ~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~f 177 (190)
T COG2119 144 ILASVLAVLLGKLIAGKLPERLLRFIAALLFLIF 177 (190)
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 9998899997799871178899999999999999
No 245
>TIGR00769 AAA ADP/ATP carrier protein family; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane.
Probab=52.89 E-value=11 Score=14.69 Aligned_cols=146 Identities=10% Similarity=0.025 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----CCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCHHHHHHHHHHH
Q ss_conf 999999999999999873899899999980-----9998999999999999999-9999999999852628999999997
Q gi|254780843|r 12 TKIYIFILFFLFGGITSLNSILVPKLQNSF-----SLTYLQAMLVEAIFFSCYF-FFSIPAGMFIQRYGYIKGICTGLLI 85 (420)
Q Consensus 12 ~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~-----~~s~~~~g~i~s~~~~~~~-i~~~~~G~l~Dr~Grr~~l~~~~~~ 85 (420)
+.+-++++||.+.|.+.+ +-++||.+ |-+...+..+=.--.+..+ +..++.++|+|++.|+.++-.-..-
T Consensus 8 K~~PL~lm~FCi~fNYt~----Lrd~KD~LvVta~GsgAE~IPFLK~W~~vP~Avi~ml~Y~KL~~~L~k~alFY~v~~~ 83 (491)
T TIGR00769 8 KILPLFLMFFCILFNYTI----LRDTKDTLVVTAKGSGAEIIPFLKTWVVVPSAVIFMLIYTKLSNILSKEALFYTVISP 83 (491)
T ss_pred HHHHHHHHHHHHHHHHHH----HHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHH
T ss_conf 154789999999865687----6238867898358997210212557401025888999998885111433200010578
Q ss_pred HHHHHHCCHHC-----CC--------------------------CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHH
Q ss_conf 64321000000-----13--------------------------202467899988777567888765310000123035
Q gi|254780843|r 86 MSLGCILFTAT-----IE--------------------------ITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPN 134 (420)
Q Consensus 86 ~~i~~ll~~~a-----~~--------------------------~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~ 134 (420)
+.+-..++++. .. ..||..+++..=+ -|.-..+.--.....+.+.-+
T Consensus 84 Fl~fF~lF~~V~YP~~d~lHP~~~Ad~ll~~L~p~f~G~i~ilR~WsFa~FYv~aEL--WGSvvlSlLFWGfANqIT~i~ 161 (491)
T TIGR00769 84 FLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAEL--WGSVVLSLLFWGFANQITTID 161 (491)
T ss_pred HHHHHHHCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHCCCCCHH
T ss_conf 999985214875177765470058999998507764212454355889999999999--999999998776305563211
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 78877664431100003454788888641
Q gi|254780843|r 135 TAVSRLTFAQFFNSLGTAIFPYIGSVLML 163 (420)
Q Consensus 135 ~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 163 (420)
|..|..++...+.++..........+...
T Consensus 162 EAKrFY~LfG~GaN~al~~sG~~~~y~s~ 190 (491)
T TIGR00769 162 EAKRFYALFGLGANVALIVSGRVIKYFSK 190 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 32324557878999999877789988630
No 246
>KOG2601 consensus
Probab=50.67 E-value=12 Score=14.50 Aligned_cols=160 Identities=14% Similarity=0.116 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
Q ss_conf 999999999999999987389989999998099-9899999999999999999999999998526289999999976432
Q gi|254780843|r 11 CTKIYIFILFFLFGGITSLNSILVPKLQNSFSL-TYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLG 89 (420)
Q Consensus 11 ~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~-s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~ 89 (420)
.+.++++.-+|+.-....+..-.+...+.+++- |-.-...-+-.-.....+..+..|...|+..|+|++...+.+--++
T Consensus 27 ~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlS 106 (503)
T KOG2601 27 STVIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLS 106 (503)
T ss_pred CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHH
T ss_conf 40311447999857667688999999999975750006889999987678865788888732215888998887533399
Q ss_pred H------HCCHHCCC---CCHHHHHHHHHHHH----HHHHHHHHHHHHCCHHCC-------CCHHHHHHHHHHHHHHCCC
Q ss_conf 1------00000013---20246789998877----756788876531000012-------3035788776644311000
Q gi|254780843|r 90 C------ILFTATIE---ITTFKVFLIALCIL----AIGVVIIQVALNPFISLL-------GDPNTAVSRLTFAQFFNSL 149 (420)
Q Consensus 90 ~------ll~~~a~~---~~~~~~~~~~~~i~----g~g~~~~~~~~~~~~~~~-------~~~~~r~~~~~~~~~~~~~ 149 (420)
. +...+... ..+++.+..+..+. .++.-.........-.|| .++....+..+..-..-..
T Consensus 107 v~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~ 186 (503)
T KOG2601 107 VIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQS 186 (503)
T ss_pred HHHHHHHHHHHEEECCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEECCCCCHHHHHHCCHHHHHHHHH
T ss_conf 99987887641251221103560999999999999999999875211786042799964899878875300355305666
Q ss_pred HHHHHHHHHHHHHHCCCCCHH
Q ss_conf 034547888886412342046
Q gi|254780843|r 150 GTAIFPYIGSVLMLGNLASPN 170 (420)
Q Consensus 150 g~~~g~~~~~~l~~~~~~~~~ 170 (420)
...+.|...+.++........
T Consensus 187 tn~Lapv~tg~Iitfvsl~~~ 207 (503)
T KOG2601 187 TNLLAPVITGLIITFVSLRAS 207 (503)
T ss_pred HHCHHHHHHCCCCEEECHHHH
T ss_conf 411225553310204101321
No 247
>TIGR00939 2a57 Nucleoside Transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response . Both sequences encode a hydrophobic 36kD protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation . Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response . Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria . ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane.
Probab=49.27 E-value=13 Score=14.39 Aligned_cols=103 Identities=8% Similarity=0.042 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHCC-CCCCCCCHHHC--CCHHHHHHHHHHHH-HHHHHHC------------CHHHHHHHHHHHHHHHH
Q ss_conf 889999876431001-11111000000--00012455554567-6899622------------33689999999999999
Q gi|254780843|r 276 QHTAIYWGSAMIGRF-IGTWILSRFSA--EKTLCAFATTACSL-VILSSYT------------TGFISGWSLIAVGLFNS 339 (420)
Q Consensus 276 ~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~------------~~~~~~~~~~~~g~~~~ 339 (420)
.....+.+....+|. +..+..-+-.+ ++.......+-.+. .++.... ......+...+.|+.+|
T Consensus 373 ~~f~~FN~fD~lGR~~l~~~~mw~~~~~~~~~~~~~~~aR~lfiPLf~lc~~~~~~~~p~~~~~~~~~~~~~~~fgfsnG 452 (503)
T TIGR00939 373 LAFLLFNVFDLLGRSSLTAKFMWPDEKSRRRILVILSIARVLFIPLFLLCNVKQRSELPVFFEGDAYFIILMLLFGFSNG 452 (503)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHH
T ss_conf 99999989999877878635425887541268999999999985689743565223157466002699999999986778
Q ss_pred HHHHHHHHHHHHH--HHH-HHH-HHHHHHHHHH-HHHHHHHHHH
Q ss_conf 9999999999963--015-656-9999999999-9999999999
Q gi|254780843|r 340 IMFPTIFSLASAS--LED-QAS-GGSGIICTTI-SGGVIIPLGV 378 (420)
Q Consensus 340 ~~~~~~~~~~~~~--~~~-~~~-~~~~~~~~~~-~g~~i~p~i~ 378 (420)
-..+..+-++.+. ++. +.+ .++.++.+.. +|.++|..+.
T Consensus 453 Yl~Sl~m~~~P~~~~v~~d~e~~~AG~~~~~fL~~GL~~Ga~~s 496 (503)
T TIGR00939 453 YLGSLAMILAPKQKSVDPDHEREVAGALMVIFLLVGLALGAVLS 496 (503)
T ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999986157667868466789988999999999999999999
No 248
>PRK02237 hypothetical protein; Provisional
Probab=46.00 E-value=14 Score=14.11 Aligned_cols=49 Identities=14% Similarity=-0.091 Sum_probs=30.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHC
Q ss_conf 9899999999999999999999999998526289999999976432100
Q gi|254780843|r 44 TYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCIL 92 (420)
Q Consensus 44 s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll 92 (420)
.++..|=+..+|---|.+.++.+++..|+.-+.+-=.+|..+..+|...
T Consensus 53 ~p~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~i 101 (108)
T PRK02237 53 QPAAFGRVYAAYGGVYIAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAV 101 (108)
T ss_pred CCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 9121200899852299999999999974889975589869999973887
No 249
>TIGR02838 spore_V_AC stage V sporulation protein AC; InterPro: IPR014203 This entry describes stage V sporulation protein AC; a paralog of stage V sporulation protein AE. Both are proteins found to be present in a species, if and only if, that species is one of the Firmicutes capable of endospore formation, as of the time of the publication of the genome of Carboxydothermus hydrogenoformans. Mutants in spoVAC have a stage V sporulation defect..
Probab=46.00 E-value=14 Score=14.11 Aligned_cols=55 Identities=13% Similarity=0.171 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHCHH
Q ss_conf 9999999873899899999980999899999999999999999999999-99852628
Q gi|254780843|r 20 FFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGM-FIQRYGYI 76 (420)
Q Consensus 20 ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~-l~Dr~Grr 76 (420)
|++-|+.-.+=..+.......+++|+.|++-..++.++ ++++++.|. +=||+++.
T Consensus 24 F~~GGLIC~iGq~~~~fy~~~f~~se~~a~~~t~~tlI--fl~alLTG~G~YDkia~~ 79 (141)
T TIGR02838 24 FLVGGLICLIGQLISDFYLRYFQFSEKTAGSPTVATLI--FLSALLTGLGVYDKIAQF 79 (141)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHH--HHHHHHHCCCHHHHHHHH
T ss_conf 76775999899999999985535347650372899999--999997156547667756
No 250
>pfam02694 UPF0060 Uncharacterized BCR, YnfA/UPF0060 family.
Probab=44.60 E-value=15 Score=14.00 Aligned_cols=47 Identities=15% Similarity=0.044 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHC
Q ss_conf 99999999999999999999999998526289999999976432100
Q gi|254780843|r 46 LQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCIL 92 (420)
Q Consensus 46 ~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll 92 (420)
...|=+..+|---|.+.++.+++..|+.-+.+-=.+|..+..+|...
T Consensus 54 ~~fGRvYAAYGGvyI~~Sl~W~w~vdg~~pd~~D~iGa~i~L~G~~i 100 (107)
T pfam02694 54 AAFGRVYAAYGGVFVCLALMWGWVVDGVKPDLYDWIGALIALCGVLV 100 (107)
T ss_pred CCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 11006999853099999999999974878967789859999983898
No 251
>TIGR02123 TRAP_fused TRAP transporter, 4TM/12TM fusion protein; InterPro: IPR011853 In some species, the 12-transmembrane spanning and 4-transmembrane spanning components of tripartite ATP-independent periplasmic (TRAP)-type transporters are fused. This entry describes such transporters, found in the archaea and in bacteria..
Probab=43.46 E-value=16 Score=13.90 Aligned_cols=143 Identities=17% Similarity=0.166 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCCHHH---------HHHHHHH--HHHHHHHHHHHHHHHHHHHC
Q ss_conf 20059999999999999999873899-899999980999899---------9999999--99999999999999998526
Q gi|254780843|r 7 RNIQCTKIYIFILFFLFGGITSLNSI-LVPKLQNSFSLTYLQ---------AMLVEAI--FFSCYFFFSIPAGMFIQRYG 74 (420)
Q Consensus 7 k~~~~~~i~i~~~ff~~g~~~~~~~~-~~p~l~~~~~~s~~~---------~g~i~s~--~~~~~~i~~~~~G~l~Dr~G 74 (420)
|..=+....+...|.+++ +.++ -+|.+=++=+.|-.| .|...+. -...|.+.=++.|-+.+|.|
T Consensus 121 R~~G~~L~~l~~~f~~Y~----l~g~~~lPG~l~h~g~~~~~l~~~~~~~teG~fGtp~~vs~~~if~F~LFGafL~~~G 196 (681)
T TIGR02123 121 RTVGWALPILALVFLLYA----LFGPIWLPGILRHRGYSLEQLITHLYLTTEGIFGTPIQVSATYIFLFILFGAFLEKSG 196 (681)
T ss_pred HHHHHHHHHHHHHHHHHH----HHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 732069999999999996----3043347762478998899999887775013578799999999999999999999850
Q ss_pred HHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHH----HHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCH
Q ss_conf 2899999999764321000000132024678999887775----678887653100001230357887766443110000
Q gi|254780843|r 75 YIKGICTGLLIMSLGCILFTATIEITTFKVFLIALCILAI----GVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLG 150 (420)
Q Consensus 75 rr~~l~~~~~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~----g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 150 (420)
-=+-+ .-+.....|..-=+.+. ...+...+.|. +.+-...+..-.+.-.-....|.+.-+-..+..+.|
T Consensus 197 ~G~fF-~D~a~a~~G~~~GGPAK------vAV~sSal~G~~sGSsvANvVttG~fTIPlMKr~Gy~~~fAgAvEAaAS~G 269 (681)
T TIGR02123 197 VGKFF-IDLAFALAGKRRGGPAK------VAVVSSALMGMISGSSVANVVTTGSFTIPLMKRAGYKPEFAGAVEAAASTG 269 (681)
T ss_pred HHHHH-HHHHHHHHCCCCCCCCH------HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHC
T ss_conf 78999-99999983767899504------578766788778999998888520000356763777977416668878606
Q ss_pred HHHHHHHHHH
Q ss_conf 3454788888
Q gi|254780843|r 151 TAIFPYIGSV 160 (420)
Q Consensus 151 ~~~g~~~~~~ 160 (420)
+-+-|.+-|.
T Consensus 270 GQImPPiMGA 279 (681)
T TIGR02123 270 GQIMPPIMGA 279 (681)
T ss_pred CCCCHHHHHH
T ss_conf 7012358999
No 252
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=42.45 E-value=17 Score=13.82 Aligned_cols=152 Identities=13% Similarity=0.094 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
Q ss_conf 59999999999999999873899899999980-99989999999999999999999999999852628999999997643
Q gi|254780843|r 10 QCTKIYIFILFFLFGGITSLNSILVPKLQNSF-SLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSL 88 (420)
Q Consensus 10 ~~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~-~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i 88 (420)
++..++....| .+++.--..-..+-.+...+ |-+--|.+++.+.|...+.+++..+-++.|.--.-+-+..-+++-.+
T Consensus 7 ~~~alL~laVf-~~aa~GlvyElal~tLatyLlG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgli 85 (508)
T COG4262 7 RWRALLLLAVF-VCAACGLVYELALGTLATYLLGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLI 85 (508)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 79999999999-99885899999999999986288354117999999998020365521266736788899999999885
Q ss_pred HH----HCC-HHCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 21----000-0001-32024678999887775678887653100001230357887766443110000345478888864
Q gi|254780843|r 89 GC----ILF-TATI-EITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLM 162 (420)
Q Consensus 89 ~~----ll~-~~a~-~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 162 (420)
+. .++ .++. ..++-+.+....++.|.-.|...|..+.+.... ..+.....+.....-.+|...+.+...++.
T Consensus 86 gg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~LVG~EiPL~mrml~~r--~a~~k~~~s~vl~~DYLGal~~gLl~p~ll 163 (508)
T COG4262 86 GGVSAAALYLLFALESAPSRLVLYALTAVIGVLVGAEIPLLMRMLQRR--QAKAKDLGSRVLTLDYLGALAGGLLWPFLL 163 (508)
T ss_pred CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 031699999999853334899999999999989712108999999998--877776655631067664435777889998
Q ss_pred HC
Q ss_conf 12
Q gi|254780843|r 163 LG 164 (420)
Q Consensus 163 ~~ 164 (420)
..
T Consensus 164 lP 165 (508)
T COG4262 164 LP 165 (508)
T ss_pred HH
T ss_conf 66
No 253
>PRK11598 putative cell division protein; Provisional
Probab=40.41 E-value=18 Score=13.64 Aligned_cols=60 Identities=7% Similarity=0.027 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q ss_conf 998999999809998-999999999999999999999999985262899999999764321
Q gi|254780843|r 31 SILVPKLQNSFSLTY-LQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGC 90 (420)
Q Consensus 31 ~~~~p~l~~~~~~s~-~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ 90 (420)
-++.-.+-+.++.+. .....+.|+..+-..+..+....++-|+-.|+++++-.++.++.+
T Consensus 29 ~~f~~~~~~~~~~~~~~~~~f~~sl~l~l~~~~~~~~~ll~~~~l~Kp~~i~l~l~sa~~s 89 (545)
T PRK11598 29 IAFYKQVLQLLPLDSLHNVLVFLSMPVVAFSVINIVFTLLSFPWLRRPLACLFILVGAAAQ 89 (545)
T ss_pred HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999974676652022899999999999999999999999999999999999999999
No 254
>pfam09930 DUF2162 Predicted transporter (DUF2162). Members of this family of bacterial proteins are thought to be membrane transporters, but their exact function has not, as yet, been elucidated.
Probab=37.71 E-value=20 Score=13.42 Aligned_cols=15 Identities=20% Similarity=0.282 Sum_probs=6.9
Q ss_pred CCCCHHHHHHHHHHH
Q ss_conf 221012468889999
Q gi|254780843|r 267 LHLDGISAGQHTAIY 281 (420)
Q Consensus 267 ~~~~~~~~~~~~~~~ 281 (420)
.+.+....+......
T Consensus 126 ~~ls~~~iGl~vg~~ 140 (228)
T pfam09930 126 LGLSPVALGLVVGLA 140 (228)
T ss_pred CCCCHHHHHHHHHHH
T ss_conf 687488999999999
No 255
>TIGR00806 rfc reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy , such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules .; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane.
Probab=35.33 E-value=22 Score=13.21 Aligned_cols=154 Identities=14% Similarity=0.213 Sum_probs=112.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
Q ss_conf 0599999999999999998738---9989999998099989999-99999999999999999999985262899999999
Q gi|254780843|r 9 IQCTKIYIFILFFLFGGITSLN---SILVPKLQNSFSLTYLQAM-LVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLL 84 (420)
Q Consensus 9 ~~~~~i~i~~~ff~~g~~~~~~---~~~~p~l~~~~~~s~~~~g-~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~ 84 (420)
..|+.+.+++||| |+...+- +-+.|+...+.++|..+.. -+.-+....+...-+|.=.|.|-+-.|+++++-.+
T Consensus 23 ~~W~~lv~YlC~y--G~~~~~RP~E~f~~~Y~~~~~n~~~~~~~~~i~P~l~YS~L~~LvP~FLLTd~l~YkP~L~l~~l 100 (542)
T TIGR00806 23 KSWRVLVLYLCFY--GFVAQLRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSYLAVLVPVFLLTDYLRYKPVLVLQAL 100 (542)
T ss_pred HHHHHHHHHHHHH--HHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8889999999799--87853279974100245545531067640452110158899999999998667731269999889
Q ss_pred HHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
Q ss_conf 76432100000013202467899988777567888765310000123035788776644311000034547888886412
Q gi|254780843|r 85 IMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLG 164 (420)
Q Consensus 85 ~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 164 (420)
-+...-+++.+. .|.+..-+.-.+-+...+. ..+..+++....++++-.+..+..-+..-+|...+..++..++..
T Consensus 101 Sf~~~Wlll~lG---~SV~~~QllE~FY~~~~A~-~IAY~~YIf~~V~~~~Y~~~~~y~RAA~L~G~F~~~~L~Q~L~~l 176 (542)
T TIGR00806 101 SFVAVWLLLLLG---KSVVHMQLLEVFYSVTMAA-RIAYSSYIFSLVRPSRYKRAAAYSRAAVLLGVFLSSVLGQLLVTL 176 (542)
T ss_pred HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH-HHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 999999999960---5899999999998899999-888887653002513333467788999999999999999997522
Q ss_pred CCCC
Q ss_conf 3420
Q gi|254780843|r 165 NLAS 168 (420)
Q Consensus 165 ~~~~ 168 (420)
....
T Consensus 177 ~~~s 180 (542)
T TIGR00806 177 NWVS 180 (542)
T ss_pred CHHH
T ss_conf 2356
No 256
>PRK03818 hypothetical protein; Validated
Probab=35.19 E-value=22 Score=13.20 Aligned_cols=50 Identities=14% Similarity=0.071 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHCCC--H------HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
Q ss_conf 99899999980999--8------999999999999999999999999985262899999
Q gi|254780843|r 31 SILVPKLQNSFSLT--Y------LQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICT 81 (420)
Q Consensus 31 ~~~~p~l~~~~~~s--~------~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~ 81 (420)
+.++-++..+++.+ + .+.|+...+|.+|+-.+.-+..-+ .|-|.|..++.
T Consensus 40 gL~~G~~~~~~g~~~~~~~l~~v~~~Gl~LFvyaVGl~~GP~FF~sl-~~~Gl~~~lla 97 (552)
T PRK03818 40 GIIVGHFVSQFGLTLDPDMLHFIQEFGLILFVYTIGIQVGPGFFSSL-RKSGLRLNLFA 97 (552)
T ss_pred HHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH-HHCCHHHHHHH
T ss_conf 99997401221777683378999998899998876551177999999-86039999999
No 257
>PRK10238 aromatic amino acid transporter; Provisional
Probab=34.16 E-value=23 Score=13.11 Aligned_cols=34 Identities=12% Similarity=0.094 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 12379999999999999999998531110201279
Q gi|254780843|r 385 ASLRDAMFVPAVCYIIIAIYGIYCCYKENNFEQNT 419 (420)
Q Consensus 385 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (420)
.+.+.+.+...+.++ +.....+..+|++|.+|+|
T Consensus 423 ~~~~~~~~~~~~~~~-~l~~~y~~~~k~~~~~~~~ 456 (456)
T PRK10238 423 PGMAISVYLIPVWLI-VLGIGYLFKEKTAKAVKAH 456 (456)
T ss_pred CCHHHHHHHHHHHHH-HHHHHHHEEEECCCCCCCC
T ss_conf 438999999999999-9978873255035433579
No 258
>PTZ00042 stevor; Provisional
Probab=33.29 E-value=24 Score=13.03 Aligned_cols=31 Identities=13% Similarity=0.208 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCC
Q ss_conf 2379999999999999999998531110-201
Q gi|254780843|r 386 SLRDAMFVPAVCYIIIAIYGIYCCYKEN-NFE 416 (420)
Q Consensus 386 g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 416 (420)
.+..+-++..+..++..+.-+|..|||| .|+
T Consensus 264 P~GIaalVLlilaVvLIILYIWLyrRRKnSWK 295 (304)
T PTZ00042 264 PCGIAALVLLILAVVLIILYIWLYRRRKNSWK 295 (304)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
T ss_conf 62999999999999999999999984124218
No 259
>PRK11099 putative inner membrane protein; Provisional
Probab=32.23 E-value=25 Score=12.94 Aligned_cols=31 Identities=6% Similarity=0.068 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9996123799999999999999999985311
Q gi|254780843|r 381 LVDIASLRDAMFVPAVCYIIIAIYGIYCCYK 411 (420)
Q Consensus 381 l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (420)
+.|.+|+..++.+...++.+..+...+..||
T Consensus 354 l~~~fG~~gal~~~~~ll~~~~~l~~~~~k~ 384 (398)
T PRK11099 354 LLETFGPLGGLLITYLLLFLALLLVIGWEKR 384 (398)
T ss_pred EHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 1477484209999999999999999999889
No 260
>pfam00606 Glycoprotein_B Herpesvirus Glycoprotein B. This family of proteins contains a transmembrane region.
Probab=31.61 E-value=25 Score=12.88 Aligned_cols=30 Identities=7% Similarity=0.058 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999612379999999
Q gi|254780843|r 366 TTISGGVIIPLGVGYLVDIASLRDAMFVPA 395 (420)
Q Consensus 366 ~~~~g~~i~p~i~G~l~d~~g~~~~~~~~~ 395 (420)
.+.+++++++.+.|.+.=..+...++.+.+
T Consensus 643 v~~v~ga~~siVsG~~sFl~NPfGg~~i~l 672 (711)
T pfam00606 643 VSGVAGAVGSIVSGVVSFLKNPFGGLLIIL 672 (711)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf 454678888888888987039578899999
No 261
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=22.91 E-value=38 Score=12.04 Aligned_cols=111 Identities=9% Similarity=-0.055 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCC
Q ss_conf 99999999873899899999980999899999999999999999999999998526289999999976432100000013
Q gi|254780843|r 19 LFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTATIE 98 (420)
Q Consensus 19 ~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a~~ 98 (420)
+++++ ...+.-|+ .+..++|++.+|...+.|+-.+...++.+.--.-..+.|-|-....|.....++.........
T Consensus 26 ~lamf--g~~V~VPl--ivg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFafi~p~i~~~~~~ 101 (451)
T COG2233 26 LLAMF--GATVLVPL--LVGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFAFVAPMIAIGGTT 101 (451)
T ss_pred HHHHH--HCCHHHHH--HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHCC
T ss_conf 99998--26107658--853577998788888999999997799999996026766678736744089999999998404
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCH
Q ss_conf 20246789998877756788876531000012303
Q gi|254780843|r 99 ITTFKVFLIALCILAIGVVIIQVALNPFISLLGDP 133 (420)
Q Consensus 99 ~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~ 133 (420)
-+.........+..|+......+.....+...+||
T Consensus 102 g~~~~~~~G~ii~ag~~~~li~~~~~~~l~rlfpP 136 (451)
T COG2233 102 GDGIAALLGGIIAAGLVYFLISPIVKIRLARLFPP 136 (451)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 87538999999999999999999999999985898
No 262
>pfam06645 SPC12 Microsomal signal peptidase 12 kDa subunit (SPC12). This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the pr
Probab=21.49 E-value=40 Score=11.88 Aligned_cols=42 Identities=19% Similarity=0.289 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHC
Q ss_conf 999999999999961237999999999999999--99985311102
Q gi|254780843|r 371 GVIIPLGVGYLVDIASLRDAMFVPAVCYIIIAI--YGIYCCYKENN 414 (420)
Q Consensus 371 ~~i~p~i~G~l~d~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 414 (420)
+++...+.|++.+..... .++.++++++.++ ..-|-.+++|.
T Consensus 20 ~~vi~fi~Gy~~q~~~~~--v~i~~~g~~l~~l~~vP~WP~ynr~P 63 (76)
T pfam06645 20 FAVISFIVGYITQDFSLT--VYIGLAGTALTLLLVLPPWPFYNKNP 63 (76)
T ss_pred HHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHEECCCHHHCCCC
T ss_conf 999999999999999999--99999999997841007976760598
No 263
>TIGR01477 RIFIN variant surface antigen, rifin family; InterPro: IPR006373 Malaria is still a major cause of mortality in many areas of the world. Plasmodium falciparum causes the most severe human form of the disease and is responsible for most fatalities. Severe cases of malaria can occur when the parasite invades and then proliferates within red blood cell erythrocytes. The parasite produces many variant antigenic proteins, encoded by multigene families, which are present on the surface of the infected erythrocyte and play important roles in virulence. A crucial survival mechanism for the malaria parasite is its ability to evade the immune response by switching these variant surface antigens. The high virulence of P. falciparum relative to other malarial parasites is in large part due to the fact that in this organism many of these surface antigens mediate the binding of infected erythrocytes to the vascular endothelium (cytoadherence) and non-infected erythrocytes (rosetting). This can lead to the accumulation of infected cells in the vasculature of a variety of organs, blocking the blood flow and reducing the oxygen supply. Clinical symptoms of severe infection can include fever, progressive anaemia, multi-organ dysfunction and coma. For more information see . This entry represents the rifin family of variant surface antigens, encoded by the rif (short for "repetetive interspersed family") genes. This is the largest variant surface antigen family in P. falciparum, with roughly 150 genes present in the genome of this parasite . The function of these proteins is not yet known, but rifins are strongly immunogenic and high levels of anti-rifin antibodies are correlated with rapid parasite clearance and asymptomatic infections . .
Probab=20.89 E-value=42 Score=11.82 Aligned_cols=25 Identities=16% Similarity=0.365 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 9999999999998531110201279
Q gi|254780843|r 395 AVCYIIIAIYGIYCCYKENNFEQNT 419 (420)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (420)
.+.++.+.+|.+...||+|+-+|++
T Consensus 363 iIVLIMvIIYLILRYRRKKKMKKKl 387 (395)
T TIGR01477 363 IIVLIMVIIYLILRYRRKKKMKKKL 387 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCHHH
T ss_conf 9999999999987543112203255
Done!