HHsearch alignment for GI: 254780843 and conserved domain: pfam03825
>pfam03825 Nuc_H_symport Nucleoside H+ symporter.
Probab=99.35 E-value=2.4e-10 Score=68.13 Aligned_cols=151 Identities=12% Similarity=0.216 Sum_probs=116.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHC
Q ss_conf 99999999987389989999998099989999999-99999999999999999985262899999999764321000000
Q gi|254780843|r 18 ILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVE-AIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTAT 96 (420)
Q Consensus 18 ~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~-s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~a 96 (420)
T Consensus 214 ~~~~l~~~~h~~yy~F~s~yl~~~gg~~~~~~~~~~~lgvvaEI~~f~~~~~ll~r~g~~~lll~a~~~~~lR~~l~a~~ 293 (400)
T pfam03825 214 VFSFLLGAILQIYNVFANAFLTNFVGFAVKLASIVLSLGQVAEIIFMLTLPFFLKRFGIKVVMLVGVVAWALRFAFFAYG 293 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999998999999989999998477267799999999999999999999999998489999999999999999999942
Q ss_pred CCCC--HHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHCCCCC
Q ss_conf 1320--2467899988777567888765310000123035788776644311-0000345478888864123420
Q gi|254780843|r 97 IEIT--TFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFF-NSLGTAIFPYIGSVLMLGNLAS 168 (420)
Q Consensus 97 ~~~~--~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~g~~~g~~~~~~l~~~~~~~ 168 (420)
T Consensus 294 ~~~~~~~~~~l~l~q~LHg~tfg~f~~a~~~~v~~~~p~~~ra~~Q~l~~~~~~G~g~~iG~~~~G~l~~~f~~~ 368 (400)
T pfam03825 294 ADPVPFGVALLLLSMIVHGVAYDFFNITGYIFVDKEVPKDIRASAQGLFNLMINGVGNVLGSILSGMLVGMFTTD 368 (400)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 674037999999999999999999999999999986885538799999999997089999999999999997067