HHsearch alignment for GI: 254780845 and conserved domain: COG0208

>COG0208 NrdF Ribonucleotide reductase, beta subunit [Nucleotide transport and metabolism].
Probab=100.00  E-value=0  Score=617.51  Aligned_cols=334  Identities=37%  Similarity=0.628  Sum_probs=312.4

Q ss_pred             CHHCCCCCCCCHHHCCCCCCCC-CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf             1000654578813374868899-800017861679999999999457987036747989985202689989999999999
Q gi|254780845|r    8 SPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNL   86 (352)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~-~~~~l~p~kY~~~~~ly~k~~~~fW~peEi~l~~D~~dw~t~~~Lt~~Ek~~~~~~l   86 (352)
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~iky~~~~~~y~~~~~nFW~PeeI~ls~D~~dw~~---Ls~~Ek~~~~~vl   78 (348)
T COG0208           2 YKIFNPTKNDELEEPKIFNGNPTNAINWNPIKYPWALELYKKLTANFWLPEEIDLSNDIKDWKK---LSDDEKDLIIRVL   78 (348)
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHH---CCHHHHHHHHHHH
T ss_conf             7433653567533001036786554557764448999999998865788101576231999876---7999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH--HHHH-HHHHHHHHHHHHHHHHH
Q ss_conf             99986433334556664013305779999999999999977899999999714646--9999-99972001898778899
Q gi|254780845|r   87 GFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELF-NMYREVPSITAKANWAL  163 (352)
Q Consensus        87 ~~~~~~D~~v~~~~~~~i~~~~~~~E~~~~l~~q~~~E~iH~~sYs~il~~l~~~~--~e~f-~~~~~~~~i~~k~~~~~  163 (352)
T Consensus        79 ~~lt~lDsiq~~~~~~~~~~~v~~pe~~~~l~~~af~E~iHs~SYs~i~~tl~~~e~~~~~~~~~~~~~~~l~~k~~~i~  158 (348)
T COG0208          79 AFLTLLDSIQANNGVPALSPLVTTPEEEAVLTNQAFMEAIHARSYSYIFDTLGPTEDEDEVFDDWVATNEILQEKAEIIL  158 (348)
T ss_pred             HHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf             99999998886011888998746879999999999999999999999999858970067999998752499999999999


Q ss_pred             HHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99974012101026777401499999999740001444114788998997598012899999998566666999999999
Q gi|254780845|r  164 QYTQTLSSPSFTTGTKDADQEFLQDLFVFYVVFEGMWFYTGFAQILSLGRANKMVGIAEQYQYIMRDESLHLNFGIDVIN  243 (352)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~lEGi~Fys~Fa~~~~l~~~g~m~g~~~~i~~I~RDE~lH~~f~~~l~~  243 (352)
T Consensus       159 ~~y~~-~~~~~----~~~~~~~~~~~~v~~~~lEgi~FYsGFa~~~~l~~r~kM~g~a~iirlI~RDE~~H~~~~~~l~~  233 (348)
T COG0208         159 RYYDD-LGDDP----DDPLEEFLLKLVVASVILEGILFYSGFAYPLYLARRGKMPGTAEIIRLIIRDEALHLYFIGYLIQ  233 (348)
T ss_pred             HHHHH-CCCCC----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99873-16785----54248999999999999999999978999999876268877799999999779999989999999


Q ss_pred             HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
Q ss_conf             76553754220678999999999999876886887518884799989999999999999999788798899988832578
Q gi|254780845|r  244 QIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM  323 (352)
Q Consensus       244 ~l~~E~p~l~~~~~~~~i~~~~~eave~E~~~~~~~~~~~~~Gl~~~~~~~yi~y~an~rL~~lG~~~~f~~~~nP~~W~  323 (352)
T Consensus       234 ~~~~e~~~~~t~e~~~~~~~l~~~ave~E~~y~~~~~~-~~~Glt~d~~~~Yi~y~ankrL~~lG~~~~y~~~~NP~~~~  312 (348)
T COG0208         234 RLVAENPELWTAELKDEIYDLFKEAVELEKEYAEYLYP-GILGLTEDLVKQYIRYNANKRLQNLGLEPLYPAEENPIPWI  312 (348)
T ss_pred             HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
T ss_conf             99873838556888999999999999999999998735-65799889999999999879999759998899878965799


Q ss_pred             HHHHCCCCCCCCCCCCCCCCCCCC-CCC
Q ss_conf             997178867555766711221058-677
Q gi|254780845|r  324 SEVIDLKKEKNFFETRVTEYQQGA-ELK  350 (352)
Q Consensus       324 ~~~~~~~~~tnFFe~~~t~Y~k~~-~~~  350 (352)
T Consensus       313 ~~~~~~~~~~dFFe~~~ssY~~~~~~~~  340 (348)
T COG0208         313 ELSLSADEKTDFFEGRVSSYQKGSVASE  340 (348)
T ss_pred             HHHCCCCCCCCCCCCCCCHHHHHHCCCC
T ss_conf             8623433357750046416776104567