HHsearch alignment for GI: 254780845 and conserved domain: COG0208
>COG0208 NrdF Ribonucleotide reductase, beta subunit [Nucleotide transport and metabolism].
Probab=100.00 E-value=0 Score=617.51 Aligned_cols=334 Identities=37% Similarity=0.628 Sum_probs=312.4
Q ss_pred CHHCCCCCCCCHHHCCCCCCCC-CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 1000654578813374868899-800017861679999999999457987036747989985202689989999999999
Q gi|254780845|r 8 SPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNL 86 (352)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~-~~~~l~p~kY~~~~~ly~k~~~~fW~peEi~l~~D~~dw~t~~~Lt~~Ek~~~~~~l 86 (352)
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~iky~~~~~~y~~~~~nFW~PeeI~ls~D~~dw~~---Ls~~Ek~~~~~vl 78 (348)
T COG0208 2 YKIFNPTKNDELEEPKIFNGNPTNAINWNPIKYPWALELYKKLTANFWLPEEIDLSNDIKDWKK---LSDDEKDLIIRVL 78 (348)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHH---CCHHHHHHHHHHH
T ss_conf 7433653567533001036786554557764448999999998865788101576231999876---7999999999999
Q ss_pred HHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH--HHHH-HHHHHHHHHHHHHHHHH
Q ss_conf 99986433334556664013305779999999999999977899999999714646--9999-99972001898778899
Q gi|254780845|r 87 GFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELF-NMYREVPSITAKANWAL 163 (352)
Q Consensus 87 ~~~~~~D~~v~~~~~~~i~~~~~~~E~~~~l~~q~~~E~iH~~sYs~il~~l~~~~--~e~f-~~~~~~~~i~~k~~~~~ 163 (352)
T Consensus 79 ~~lt~lDsiq~~~~~~~~~~~v~~pe~~~~l~~~af~E~iHs~SYs~i~~tl~~~e~~~~~~~~~~~~~~~l~~k~~~i~ 158 (348)
T COG0208 79 AFLTLLDSIQANNGVPALSPLVTTPEEEAVLTNQAFMEAIHARSYSYIFDTLGPTEDEDEVFDDWVATNEILQEKAEIIL 158 (348)
T ss_pred HHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf 99999998886011888998746879999999999999999999999999858970067999998752499999999999
Q ss_pred HHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99974012101026777401499999999740001444114788998997598012899999998566666999999999
Q gi|254780845|r 164 QYTQTLSSPSFTTGTKDADQEFLQDLFVFYVVFEGMWFYTGFAQILSLGRANKMVGIAEQYQYIMRDESLHLNFGIDVIN 243 (352)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~lEGi~Fys~Fa~~~~l~~~g~m~g~~~~i~~I~RDE~lH~~f~~~l~~ 243 (352)
T Consensus 159 ~~y~~-~~~~~----~~~~~~~~~~~~v~~~~lEgi~FYsGFa~~~~l~~r~kM~g~a~iirlI~RDE~~H~~~~~~l~~ 233 (348)
T COG0208 159 RYYDD-LGDDP----DDPLEEFLLKLVVASVILEGILFYSGFAYPLYLARRGKMPGTAEIIRLIIRDEALHLYFIGYLIQ 233 (348)
T ss_pred HHHHH-CCCCC----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99873-16785----54248999999999999999999978999999876268877799999999779999989999999
Q ss_pred HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
Q ss_conf 76553754220678999999999999876886887518884799989999999999999999788798899988832578
Q gi|254780845|r 244 QIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 323 (352)
Q Consensus 244 ~l~~E~p~l~~~~~~~~i~~~~~eave~E~~~~~~~~~~~~~Gl~~~~~~~yi~y~an~rL~~lG~~~~f~~~~nP~~W~ 323 (352)
T Consensus 234 ~~~~e~~~~~t~e~~~~~~~l~~~ave~E~~y~~~~~~-~~~Glt~d~~~~Yi~y~ankrL~~lG~~~~y~~~~NP~~~~ 312 (348)
T COG0208 234 RLVAENPELWTAELKDEIYDLFKEAVELEKEYAEYLYP-GILGLTEDLVKQYIRYNANKRLQNLGLEPLYPAEENPIPWI 312 (348)
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
T ss_conf 99873838556888999999999999999999998735-65799889999999999879999759998899878965799
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCC-CCC
Q ss_conf 997178867555766711221058-677
Q gi|254780845|r 324 SEVIDLKKEKNFFETRVTEYQQGA-ELK 350 (352)
Q Consensus 324 ~~~~~~~~~tnFFe~~~t~Y~k~~-~~~ 350 (352)
T Consensus 313 ~~~~~~~~~~dFFe~~~ssY~~~~~~~~ 340 (348)
T COG0208 313 ELSLSADEKTDFFEGRVSSYQKGSVASE 340 (348)
T ss_pred HHHCCCCCCCCCCCCCCCHHHHHHCCCC
T ss_conf 8623433357750046416776104567