HHsearch alignment for GI: 254780845 and conserved domain: PRK13967
>PRK13967 nrdF1 ribonucleotide-diphosphate reductase subunit beta; Provisional.
Probab=100.00 E-value=0 Score=542.50 Aligned_cols=299 Identities=22% Similarity=0.345 Sum_probs=267.2
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHH
Q ss_conf 01786167999999999945798703674798998520268998999999999999986433334556664013305779
Q gi|254780845|r 33 QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPE 112 (352)
Q Consensus 33 ~l~p~kY~~~~~ly~k~~~~fW~peEi~l~~D~~dw~t~~~Lt~~Ek~~~~~~l~~~~~~D~~v~~~~~~~i~~~~~~~E 112 (352)
T Consensus 13 NWn~~~~~~~~~~w~~~~~nfW~PeEI~ls~Di~dw~~---L~~~Ek~~~~~il~~lt~lDs~q~~~~~~~~~~~~~~pe 89 (322)
T PRK13967 13 NWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQT---LSSTEQQTTIRVFTGLTLLDTAQATVGAVAMIDDAVTPH 89 (322)
T ss_pred CCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHH
T ss_conf 88887768899999999978888712162422999876---999999999999999999999998224988888728999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHH
Q ss_conf 999999999999977899999999714646--999999972001898778899999740121010267774014999999
Q gi|254780845|r 113 CRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQTLSSPSFTTGTKDADQEFLQDLF 190 (352)
Q Consensus 113 ~~~~l~~q~~~E~iH~~sYs~il~~l~~~~--~e~f~~~~~~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 190 (352)
T Consensus 90 ~~~~l~~~a~~EaIHs~SYs~i~~tl~~~~e~~~~f~~~~~~p~l~~k~~~~~~~~~~-------------~~~-~~~-~ 154 (322)
T PRK13967 90 EEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDDAFDWSEQNPYLQRKAQIIVDYYRG-------------DDA-LKR-K 154 (322)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCC-------------CHH-HHH-H
T ss_conf 9999999999999999999999998589677999999996399999999999998238-------------759-999-9
Q ss_pred HHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 99740001444114788998997598012899999998566666999999999765537542206789999999999998
Q gi|254780845|r 191 VFYVVFEGMWFYTGFAQILSLGRANKMVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATL 270 (352)
Q Consensus 191 ~~~~~lEGi~Fys~Fa~~~~l~~~g~m~g~~~~i~~I~RDE~lH~~f~~~l~~~l~~E~p~l~~~~~~~~i~~~~~eave 270 (352)
T Consensus 155 ~~~~~lEGi~FYsgF~~~l~~~~~gkM~G~~~ii~~I~RDEslH~~~~~~~~~~~~~~~~~~~~~e~~e~~~~~~~~~v~ 234 (322)
T PRK13967 155 ASSVMLESFLFYSGFYLPMYWSSRGKLTNTADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYA 234 (322)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999984699877899999999828888999999999874523787789999999999999999
Q ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC-CCHHHHHHHHC--CCCCCCCCCCCCCCCCCCC
Q ss_conf 76886887518884799989999999999999999788798899988-83257899717--8867555766711221058
Q gi|254780845|r 271 LEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID--LKKEKNFFETRVTEYQQGA 347 (352)
Q Consensus 271 ~E~~~~~~~~~~~~~Gl~~~~~~~yi~y~an~rL~~lG~~~~f~~~~-nP~~W~~~~~~--~~~~tnFFe~~~t~Y~k~~ 347 (352)
T Consensus 235 ~Ei~~~~~l~~~--lGl~-~dv~~YI~YiANrrL~~LGl~p~y~~~~~~~nP~~~~~~~~~~~~~~dFFe~r~t~Y~k~~ 311 (322)
T PRK13967 235 NEIDYAHDLYDE--LGWT-DDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFFSGSGSSYVMGT 311 (322)
T ss_pred HHHHHHHHHHHC--CCCH-HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHCC
T ss_conf 999999998712--2868-9999999899999999788999999855778836688757687632685578864004325
Q ss_pred C-CCCC
Q ss_conf 6-7789
Q gi|254780845|r 348 E-LKWD 352 (352)
Q Consensus 348 ~-~~~d 352 (352)
T Consensus 312 ~~~~~d 317 (322)
T PRK13967 312 HQPTTD 317 (322)
T ss_pred CCCCCC
T ss_conf 667765