HHsearch alignment for GI: 254780845 and conserved domain: PRK13967

>PRK13967 nrdF1 ribonucleotide-diphosphate reductase subunit beta; Provisional.
Probab=100.00  E-value=0  Score=542.50  Aligned_cols=299  Identities=22%  Similarity=0.345  Sum_probs=267.2

Q ss_pred             CCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHH
Q ss_conf             01786167999999999945798703674798998520268998999999999999986433334556664013305779
Q gi|254780845|r   33 QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPE  112 (352)
Q Consensus        33 ~l~p~kY~~~~~ly~k~~~~fW~peEi~l~~D~~dw~t~~~Lt~~Ek~~~~~~l~~~~~~D~~v~~~~~~~i~~~~~~~E  112 (352)
T Consensus        13 NWn~~~~~~~~~~w~~~~~nfW~PeEI~ls~Di~dw~~---L~~~Ek~~~~~il~~lt~lDs~q~~~~~~~~~~~~~~pe   89 (322)
T PRK13967         13 NWNRLLDAKDLQVWERLTGNFWLPEKIPLSNDLASWQT---LSSTEQQTTIRVFTGLTLLDTAQATVGAVAMIDDAVTPH   89 (322)
T ss_pred             CCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHH
T ss_conf             88887768899999999978888712162422999876---999999999999999999999998224988888728999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHH
Q ss_conf             999999999999977899999999714646--999999972001898778899999740121010267774014999999
Q gi|254780845|r  113 CRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQTLSSPSFTTGTKDADQEFLQDLF  190 (352)
Q Consensus       113 ~~~~l~~q~~~E~iH~~sYs~il~~l~~~~--~e~f~~~~~~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (352)
T Consensus        90 ~~~~l~~~a~~EaIHs~SYs~i~~tl~~~~e~~~~f~~~~~~p~l~~k~~~~~~~~~~-------------~~~-~~~-~  154 (322)
T PRK13967         90 EEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDDAFDWSEQNPYLQRKAQIIVDYYRG-------------DDA-LKR-K  154 (322)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCC-------------CHH-HHH-H
T ss_conf             9999999999999999999999998589677999999996399999999999998238-------------759-999-9


Q ss_pred             HHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             99740001444114788998997598012899999998566666999999999765537542206789999999999998
Q gi|254780845|r  191 VFYVVFEGMWFYTGFAQILSLGRANKMVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATL  270 (352)
Q Consensus       191 ~~~~~lEGi~Fys~Fa~~~~l~~~g~m~g~~~~i~~I~RDE~lH~~f~~~l~~~l~~E~p~l~~~~~~~~i~~~~~eave  270 (352)
T Consensus       155 ~~~~~lEGi~FYsgF~~~l~~~~~gkM~G~~~ii~~I~RDEslH~~~~~~~~~~~~~~~~~~~~~e~~e~~~~~~~~~v~  234 (322)
T PRK13967        155 ASSVMLESFLFYSGFYLPMYWSSRGKLTNTADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYA  234 (322)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999999984699877899999999828888999999999874523787789999999999999999


Q ss_pred             HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC-CCHHHHHHHHC--CCCCCCCCCCCCCCCCCCC
Q ss_conf             76886887518884799989999999999999999788798899988-83257899717--8867555766711221058
Q gi|254780845|r  271 LEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID--LKKEKNFFETRVTEYQQGA  347 (352)
Q Consensus       271 ~E~~~~~~~~~~~~~Gl~~~~~~~yi~y~an~rL~~lG~~~~f~~~~-nP~~W~~~~~~--~~~~tnFFe~~~t~Y~k~~  347 (352)
T Consensus       235 ~Ei~~~~~l~~~--lGl~-~dv~~YI~YiANrrL~~LGl~p~y~~~~~~~nP~~~~~~~~~~~~~~dFFe~r~t~Y~k~~  311 (322)
T PRK13967        235 NEIDYAHDLYDE--LGWT-DDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAGENHDFFSGSGSSYVMGT  311 (322)
T ss_pred             HHHHHHHHHHHC--CCCH-HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHCC
T ss_conf             999999998712--2868-9999999899999999788999999855778836688757687632685578864004325


Q ss_pred             C-CCCC
Q ss_conf             6-7789
Q gi|254780845|r  348 E-LKWD  352 (352)
Q Consensus       348 ~-~~~d  352 (352)
T Consensus       312 ~~~~~d  317 (322)
T PRK13967        312 HQPTTD  317 (322)
T ss_pred             CCCCCC
T ss_conf             667765