HHsearch alignment for GI: 254780845 and conserved domain: cd00657

>cd00657 Ferritin_like Ferritin-like superfamily of diiron-containing four-helix-bundle proteins. Ferritin-like, diiron-carboxylate proteins participate in a range of functions including iron regulation, mono-oxygenation, and reactive radical production. These proteins are characterized by the fact that they catalyze dioxygen-dependent oxidation-hydroxylation reactions within diiron centers; one exception is manganese catalase, which catalyzes peroxide-dependent oxidation-reduction within a dimanganese center. Diiron-carboxylate proteins are further characterized by the presence of duplicate metal ligands, glutamates and histidines (ExxH) and two additional glutamates within a four-helix bundle. Outside of these conserved residues there is little obvious homology. Members include bacterioferritin, ferritin, rubrerythrin, aromatic and alkene monooxygenase hydroxylases (AAMH), ribonucleotide reductase R2 (RNRR2), acyl-ACP-desaturases (Acyl_ACP_Desat), manganese (Mn) catalases, demethoxyub
Probab=96.05  E-value=0.13  Score=30.21  Aligned_cols=125  Identities=17%  Similarity=0.101  Sum_probs=74.0

Q ss_pred             HHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99998643333455666401330577999999999999997789999999971464699999997200189877889999
Q gi|254780845|r   86 LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQY  165 (352)
Q Consensus        86 l~~~~~~D~~v~~~~~~~i~~~~~~~E~~~~l~~q~~~E~iH~~sYs~il~~l~~~~~e~f~~~~~~~~i~~k~~~~~~~  165 (352)
T Consensus         3 L~~~l~~E~~a~~~Y-~~~a~~~~~~~~~~~~~~~a~eE~~H~~~l~~~~~~l~~~p~~~-------~~~------~~~~   68 (130)
T cd00657           3 LNDALAGEYAAIIAY-GQLAARAPDPDLKDELLEIADEERRHADALAERLRELGGTPPLP-------PAH------LLAA   68 (130)
T ss_pred             HHHHHHHHHHHHHHH-HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-------CHH------HHHH
T ss_conf             889999999999999-99998889977999999999999999999999999808988887-------503------3330


Q ss_pred             HHHHCCCHHHCCCCCCCHHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             974012101026777401499999999740001--4441147889989975980128999999985666669999999
Q gi|254780845|r  166 TQTLSSPSFTTGTKDADQEFLQDLFVFYVVFEG--MWFYTGFAQILSLGRANKMVGIAEQYQYIMRDESLHLNFGIDV  241 (352)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~lEG--i~Fys~Fa~~~~l~~~g~m~g~~~~i~~I~RDE~lH~~f~~~l  241 (352)
T Consensus        69 ~~~~~-------~~~~~~----~~l~~~~~~E~~a~~~y~~~------~~~~~d~~~~~~~~~i~~dE~~H~~~~~~~  129 (130)
T cd00657          69 YALPK-------TSDDPA----EALRAALEVEARAIAAYREL------IEQADDPELRRLLERILADEQRHAAWFRKL  129 (130)
T ss_pred             CCCCC-------CCCCHH----HHHHHHHHHHHHHHHHHHHH------HHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             00145-------899999----99999999999999999999------987288999999999999999999999966