HHsearch alignment for GI: 254780845 and conserved domain: cd01050
>cd01050 Acyl_ACP_Desat Acyl ACP desaturase, ferritin-like diiron-binding domain. Acyl-Acyl Carrier Protein Desaturase (Acyl_ACP_Desat) is a mu-oxo-bridged diiron-carboxylate enzyme, which belongs to a broad superfamily of ferritin-like proteins and catalyzes the NADPH and O2-dependent formation of a cis-double bond in acyl-ACPs. Acyl-ACP desaturases are found in higher plants and a few bacterial species (Mycobacterium tuberculosis, M. leprae, M. avium and Streptomyces avermitilis, S. coelicolor). In plants, Acyl-ACP desaturase is a plastid-localized, covalently ACP linked, soluble desaturase that introduces the first double bound into saturated fatty acids, resulting in the corresponding monounsaturated fatty acid. Members of this class of soluble desaturases are specific for a particular substrate chain length and introduce the double bond between specific carbon atoms. For example, delta 9 stearoyl-ACP is specific for stearic acid and introduces a double bond between carbon 9 and 1
Probab=95.96 E-value=0.078 Score=31.75 Aligned_cols=113 Identities=18% Similarity=0.142 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHH
Q ss_conf 999999999999997789999999971-4646999999972001898778899999740121010267774014999999
Q gi|254780845|r 112 ECRQYLLRQAFEEAVHSHTFQYIITSL-GLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFTTGTKDADQEFLQDLF 190 (352)
Q Consensus 112 E~~~~l~~q~~~E~iH~~sYs~il~~l-~~~~~e~f~~~~~~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 190 (352)
T Consensus 94 ~W~~Wv~~WTAEEnRHg~~Lr~YL~~tr~VDp~~lE~---------~r~~~i~------------~G~~~~~~~~p~~~~ 152 (297)
T cd01050 94 AWARWVRRWTAEENRHGDLLNKYLYLTGRVDPRALER---------TRQYLIG------------SGFDPGTDNSPYRGF 152 (297)
T ss_pred CHHHHCCCCCCCCCHHHHHHHHHEEECCCCCHHHHHH---------HHHHHHH------------CCCCCCCCCCHHHHH
T ss_conf 2565206526442403788863100056778299999---------9999983------------788999987789999
Q ss_pred HHHHHCCHHHHHHHHHHHHHHHHCCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 997400014441147889989975980-----12899999998566666999999999765537542
Q gi|254780845|r 191 VFYVVFEGMWFYTGFAQILSLGRANKM-----VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL 252 (352)
Q Consensus 191 ~~~~~lEGi~Fys~Fa~~~~l~~~g~m-----~g~~~~i~~I~RDE~lH~~f~~~l~~~l~~E~p~l 252 (352)
T Consensus 153 ~YtsfQEl-------AT~IsH~Nt~rla~~gDp~l~~i~~rIA~DE~rH~~fYr~iv~~~le~dPd~ 212 (297)
T cd01050 153 VYTSFQEL-------ATRISHRNTARLAGAGDPVLAKLLGRIAADEARHEAFYRDIVEALFELDPDG 212 (297)
T ss_pred HHHHHHHH-------CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
T ss_conf 99999875-------0133362388875059979999998875168899999999999998339367