HHsearch results for GI: 254780845 and protein with PDBid: 3n37_A

>3n37_A Ribonucleoside-diphosphate reductase 2 subunit BE; ribonucleotide reductase, four-helix bundle, dimanganese CLU oxidoreductase; 1.65A {Escherichia coli} PDB: 3n38_A 3n39_B* 3n3a_B* 3n3b_B* 1r2f_A 2bq1_I* 2r2f_A
Probab=100.00  E-value=0  Score=537.66  Aligned_cols=297  Identities=21%  Similarity=0.278  Sum_probs=274.4

Q ss_pred             CCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHH
Q ss_conf             01786167999999999945798703674798998520268998999999999999986433334556664013305779
Q gi|254780845|r   33 QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPE  112 (352)
Q Consensus        33 ~l~p~kY~~~~~ly~k~~~~fW~peEi~l~~D~~dw~t~~~Lt~~Ek~~~~~~l~~~~~~D~~v~~~~~~~i~~~~~~~E  112 (352)
                      +++-++|+|.+++|+|++++||+|+||||++|++||++   ||+.||++++++|++|+++|++|++++...+++.++.||
T Consensus        10 nwn~~~~~~~~~ly~k~~~~fW~peEi~l~~D~~d~~~---L~~~er~~~~~~l~~~~~~D~~v~~~~~~~~~~~~~~pE   86 (319)
T 3n37_A           10 NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALTPH   86 (319)
T ss_dssp             CTTSCSCHHHHHHHHHHHHTCCCGGGSCGGGGHHHHTT---SCHHHHHHHHHHHHHHHHHHHHHHHTHHHHHGGGCSSHH
T ss_pred             CCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHH
T ss_conf             38788747899999999967999624384653999865---999999999999999999999997354999987658799


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHH
Q ss_conf             999999999999977899999999714646--999999972001898778899999740121010267774014999999
Q gi|254780845|r  113 CRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQTLSSPSFTTGTKDADQEFLQDLF  190 (352)
Q Consensus       113 ~~~~l~~q~~~E~iH~~sYs~il~~l~~~~--~e~f~~~~~~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (352)
                      +++++++|+++|+||++|||+++++++.++  +++|.++.++|.+.+|++|+.++++.             +. .+.++ 
T Consensus        87 ~~~~l~~q~~~E~iHs~sYs~il~~l~~~~~~~~~~~~~~~~~~l~~k~~~~~~~~~~-------------~~-~~~~~-  151 (319)
T 3n37_A           87 EEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYRG-------------DD-PLKKK-  151 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHS-------------SC-HHHHH-
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------------CH-HHHHH-
T ss_conf             9999999999999999999999997436555789999998612877656787762145-------------50-89999-


Q ss_pred             HHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             99740001444114788998997598012899999998566666999999999765537542206789999999999998
Q gi|254780845|r  191 VFYVVFEGMWFYTGFAQILSLGRANKMVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATL  270 (352)
Q Consensus       191 ~~~~~lEGi~Fys~Fa~~~~l~~~g~m~g~~~~i~~I~RDE~lH~~f~~~l~~~l~~E~p~l~~~~~~~~i~~~~~eave  270 (352)
                      ++++++|||+|||||+++++|+++|+|||+|++|++|+|||++|+.|++.+++++++|.|..+++++.+++++++++||+
T Consensus       152 i~~~~lEGi~F~s~Fa~~~~~~~~g~m~g~~~~i~~I~RDE~lH~~f~~~l~~~l~~e~~~~~~~~~~~~i~e~~~eav~  231 (319)
T 3n37_A          152 IASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYD  231 (319)
T ss_dssp             HHHHHHHHTTTHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999889999876999999845488856899999999788899999999999876528487765689999999999999


Q ss_pred             HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC---CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf             7688688751888479998999999999999999978879889998---8832578997178867555766711221058
Q gi|254780845|r  271 LEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKKEKNFFETRVTEYQQGA  347 (352)
Q Consensus       271 ~E~~~~~~~~~~~~~Gl~~~~~~~yi~y~an~rL~~lG~~~~f~~~---~nP~~W~~~~~~~~~~tnFFe~~~t~Y~k~~  347 (352)
                      +|.+|++++++.   |++++++++||+|+||+||.+||++|+|+..   .||+||+...+++.++|||||+|||+|+||+
T Consensus       232 ~E~~~~~~~~~~---g~~~~~~~~yiky~an~~L~~lG~~~~f~~~~~~~nP~~w~~~~~~~~~~~nFFE~~~t~Y~k~~  308 (319)
T 3n37_A          232 NELQYTDELYAE---TPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVMGK  308 (319)
T ss_dssp             HHHHHHHHHSTT---SSCHHHHHHHHHHHHHHHHHHTTCCCCSCGGGCCCCHHHHHHHCC--------------------
T ss_pred             HHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHCCCCC
T ss_conf             999999998744---64227799999999999999779998889865788956899872066645688788701021056


Q ss_pred             CCC
Q ss_conf             677
Q gi|254780845|r  348 ELK  350 (352)
Q Consensus       348 ~~~  350 (352)
                      +.+
T Consensus       309 ~~~  311 (319)
T 3n37_A          309 AVE  311 (319)
T ss_dssp             ---
T ss_pred             CCC
T ss_conf             787