HHSEARCH alignment of GI: 254780845 and SCOP domain: d1afra_

Alignment
>d1afra_ a.25.1.2 (A:) delta 9-stearoyl-acyl carrier protein desaturase {Castor bean (Ricinus communis) [TaxId: 3988]}
Probab=96.92  E-value=0.014  Score=33.82  Aligned_cols=187  Identities=14%  Similarity=0.151  Sum_probs=90.1

Q ss_pred             HHHHHHHHHHH---HCCCCCCC-CC------HHHHHHHHHH-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCH
Q ss_conf             79999999999---45798703-67------4798998520-268998999999999999986433334556664--013
Q gi|254780845|r   40 GWAWEKYLSAC---NNHWMPTE-VP------MQDDLALWKS-KNGLTDDERLMIKRNLGFFASSESLVANNIVLA--IYR  106 (352)
Q Consensus        40 ~~~~~ly~k~~---~~fW~peE-i~------l~~D~~dw~t-~~~Lt~~Ek~~~~~~l~~~~~~D~~v~~~~~~~--i~~  106 (352)
                      ||+-+.-..+.   ..-|.|.+ +|      +.....+|.. .+.|+++-+-++...+.-=-.+=+.+. -+...  +.+
T Consensus        27 ~~ve~~~~~~L~~v~~~WqPhD~lP~~~~~~F~~~~~e~~~~a~~lpd~~~v~lv~nllTEd~LPtY~~-~l~~~~g~~d  105 (345)
T d1afra_          27 NWAEENILVHLKPVEKCWQPQDFLPDPASDGFDEQVRELRERAKEIPDDYFVVLVGDMITEEALPTYQT-MLNTLDGVRD  105 (345)
T ss_dssp             HHHHHHTGGGSCCGGGSCCGGGGSCCTTSTTHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHTHHHHHH-HHTTSTTTCC
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCHHHH-HHHHHHCCCC
T ss_conf             999999998744454365972359997668810003445564432888899999986652565862999-9988735233


Q ss_pred             H--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCH
Q ss_conf             3--05779999999999999977899999999714-64699999997200189877889999974012101026777401
Q gi|254780845|r  107 H--LSNPECRQYLLRQAFEEAVHSHTFQYIITSLG-LDEGELFNMYREVPSITAKANWALQYTQTLSSPSFTTGTKDADQ  183 (352)
Q Consensus       107 ~--~~~~E~~~~l~~q~~~E~iH~~sYs~il~~l~-~~~~e~f~~~~~~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~  183 (352)
                      .  ....-...+...|.++|+.|+.+-...+-.-+ .|+..+....         ...+..        .+...   ...
T Consensus       106 ~~g~~~~~W~~Wv~~WTAEEnRHg~aLr~YL~vsr~VDp~~lE~~~---------~~~~~~--------G~~~~---~~~  165 (345)
T d1afra_         106 ETGASPTSWAIWTRAWTAEENRHGDLLNKYLYLSGRVDMRQIEKTI---------QYLIGS--------GMDPR---TEN  165 (345)
T ss_dssp             SSSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHH---------HHHHHH--------CCCCS---CTT
T ss_pred             CCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH---------HHHHHC--------CCCCC---CCC
T ss_conf             3578896455422351412046899999999881778917899999---------999818--------87899---998


Q ss_pred             HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             499999999740001444114788998997598---012899999998566666999999999765537542
Q gi|254780845|r  184 EFLQDLFVFYVVFEGMWFYTGFAQILSLGRANK---MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL  252 (352)
Q Consensus       184 ~~~~~~i~~~~~lEGi~Fys~Fa~~~~l~~~g~---m~g~~~~i~~I~RDE~lH~~f~~~l~~~l~~E~p~l  252 (352)
                      .-. ..++|..+-|---    +.+--+.++..+   =|-++++...|++||.+|..|...+++...+-+|+-
T Consensus       166 ~p~-~~~vY~sfQE~AT----~vsh~nt~~~a~e~gDPvL~~I~~rIA~DE~rH~~fY~~~v~~~Le~dPd~  232 (345)
T d1afra_         166 SPY-LGFIYTSFQERAT----FISHGNTARQAKEHGDIKLAQICGTIAADEKRHETAYTKIVEKLFEIDPDG  232 (345)
T ss_dssp             CHH-HHHHHHHHHHHHH----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred             CHH-HHHHHHHHHHHHH----HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf             889-9999999998767----620999999987649979999999998788899999999999998669537


SCOP domain information

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ribonucleotide reductase-like
domain: delta 9-stearoyl-acyl carrier protein desaturase
species: Castor bean (Ricinus communis) [TaxId: 3988]