HHSEARCH alignment of GI: 254780845 and SCOP domain: d1mxra_

Alignment
>d1mxra_ a.25.1.2 (A:) Ribonucleotide reductase R2 {Escherichia coli [TaxId: 562]}
Probab=100.00  E-value=0  Score=548.47  Aligned_cols=315  Identities=23%  Similarity=0.311  Sum_probs=280.8

Q ss_pred             HHCCCCCCCCHHHCCCCCCCC-CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf             000654578813374868899-8000178616799999999994579870367479899852026899899999999999
Q gi|254780845|r    9 PIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLG   87 (352)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~-~~~~l~p~kY~~~~~ly~k~~~~fW~peEi~l~~D~~dw~t~~~Lt~~Ek~~~~~~l~   87 (352)
                      -++|+++ .+.-+++|+.|++ ++.++.|+||||+|++|++++++||+|+||||++|+.||++   ||++||++++++|+
T Consensus         3 ~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~ky~~~~~ly~~~~~~fW~p~Ei~ls~D~~dw~~---L~~~Ek~~~~~~l~   78 (339)
T d1mxra_           3 TTFSQTK-NDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA---LPEHEKHIFISNLK   78 (339)
T ss_dssp             CSSCCSC-CCTTSSCSBSSSCCCSCCCSCCSCHHHHHHHHHHHHTCCCGGGSCCTTHHHHHHT---SCHHHHHHHHHHHH
T ss_pred             CCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH---CCHHHHHHHHHHHH
T ss_conf             6578999-8500056205998774327755667999999999867999623062200899987---89999999999999


Q ss_pred             HHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99864333345566640133057799999999999999778999999997146469999999720018987788999997
Q gi|254780845|r   88 FFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQ  167 (352)
Q Consensus        88 ~~~~~D~~v~~~~~~~i~~~~~~~E~~~~l~~q~~~E~iH~~sYs~il~~l~~~~~e~f~~~~~~~~i~~k~~~~~~~~~  167 (352)
                      +|+++|++|++++...+++.++.||+++++++|+++|+||++|||+++++++.+++++|+++.++|.+++|..++.++++
T Consensus        79 ~f~~~D~~v~~~~~~~~~~~~~~pE~~~~~~~q~~~E~iH~~sYs~il~~l~~d~~~~~~~~~~~~~~~~k~~~~~~~~~  158 (339)
T d1mxra_          79 YQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYD  158 (339)
T ss_dssp             HHHHHHHHHHHHHHHHTGGGBCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHCHHHHHHHTTHHHHHH
T ss_pred             HHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_conf             99985587852509999875388999999999999999999999999999815648899999856777778999999988


Q ss_pred             HHCCCHHH----------------CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf             40121010----------------26777401499999999740001444114788998997598012899999998566
Q gi|254780845|r  168 TLSSPSFT----------------TGTKDADQEFLQDLFVFYVVFEGMWFYTGFAQILSLGRANKMVGIAEQYQYIMRDE  231 (352)
Q Consensus       168 ~~~~~~~~----------------~~~~~~~~~~~~~~i~~~~~lEGi~Fys~Fa~~~~l~~~g~m~g~~~~i~~I~RDE  231 (352)
                      .+......                .......+..+.+.+++++++|||+|||||+++++|+++|+|||+|++|+||+|||
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lEGi~f~ssF~~~~~l~~~g~m~g~~~~i~~I~RDE  238 (339)
T d1mxra_         159 ELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDE  238 (339)
T ss_dssp             HHHHHHHHHHHHCSEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf             88766788886155641345653221115789999999999999999999974899999873340001899999997323


Q ss_pred             HHHHHHHHHHHHHHHHHCCC----CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             66699999999976553754----22067899999999999987688688751888-47999899999999999999997
Q gi|254780845|r  232 SLHLNFGIDVINQIKIENPH----LWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQ  306 (352)
Q Consensus       232 ~lH~~f~~~l~~~l~~E~p~----l~~~~~~~~i~~~~~eave~E~~~~~~~~~~~-~~Gl~~~~~~~yi~y~an~rL~~  306 (352)
                      ++|+.|+++++++++++.+.    .+++++.+++++++++||++|.+|+++++++| ++|||++++++||+|+||+||.+
T Consensus       239 ~lH~~~~~~l~~~l~~~~~~~~~~~~~~e~~~~i~~~~~eave~E~~~~~~~~~~~~l~Gl~~~~~~~yi~y~an~~L~~  318 (339)
T d1mxra_         239 ALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQA  318 (339)
T ss_dssp             HHHHHHHHHHHHHHHHTSSCHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTTTCCBTTBSHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             77779999999999853771667776789999999999999999999999970479818999999999999999999997


Q ss_pred             CCCCCCCCCCCCCHHHHHHHH
Q ss_conf             887988999888325789971
Q gi|254780845|r  307 IGLEPLFKYTENPFPWMSEVI  327 (352)
Q Consensus       307 lG~~~~f~~~~nP~~W~~~~~  327 (352)
                      ||++|+|++..||+|||+.++
T Consensus       319 lG~~~~f~~~~NP~~w~~~~l  339 (339)
T d1mxra_         319 VGLDLPFQTRSNPIPWINTWL  339 (339)
T ss_dssp             TTCCCCSCCCCCSCGGGGGTC
T ss_pred             CCCCCCCCCCCCCHHHHHHHC
T ss_conf             889999999999868898639


SCOP domain information

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ribonucleotide reductase-like
domain: Ribonucleotide reductase R2
species: Escherichia coli [TaxId: 562]