HHSEARCH alignment of GI: 254780845 and SCOP domain: d3dhza1

Alignment
>d3dhza1 a.25.1.2 (A:14-297) Ribonucleotide reductase R2 {Corynebacterium ammoniagenes [TaxId: 1697]}
Probab=100.00  E-value=0  Score=471.24  Aligned_cols=276  Identities=20%  Similarity=0.303  Sum_probs=251.1

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC
Q ss_conf             00017861679999999999457987036747989985202689989999999999999864333345566640133057
Q gi|254780845|r   31 VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSN  110 (352)
Q Consensus        31 ~~~l~p~kY~~~~~ly~k~~~~fW~peEi~l~~D~~dw~t~~~Lt~~Ek~~~~~~l~~~~~~D~~v~~~~~~~i~~~~~~  110 (352)
                      ..+++.++|+|++++|+|++++||+|+||||++|++||++   ||++||++++++|++|+++|++|++++...+++.++.
T Consensus         5 ~~nwn~~~~~~~~~~y~k~~~~fW~peEi~l~~D~~d~~~---Lt~~Ek~~~~~~l~~~~~~D~~v~~~~~~~~~~~~~~   81 (284)
T d3dhza1           5 AINWNVIPDEKDLEVWDRLTGNFWLPEKIPVSNDIQSWNK---MTPQEQLATMRVFTGLTLLDTIQGTVGAISLLPDAET   81 (284)
T ss_dssp             CCCTTSCSSHHHHHHHHHHHHTCCCGGGSCGGGGHHHHHT---SCHHHHHHHHHHHHHHHHHHHHHHHTHHHHTGGGCSS
T ss_pred             CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf             7688888868899999999967999634084732999987---9999999999999999999999981472210244477


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHH
Q ss_conf             799999999999999778999999997146469--999999720018987788999997401210102677740149999
Q gi|254780845|r  111 PECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG--ELFNMYREVPSITAKANWALQYTQTLSSPSFTTGTKDADQEFLQD  188 (352)
Q Consensus       111 ~E~~~~l~~q~~~E~iH~~sYs~il~~l~~~~~--e~f~~~~~~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (352)
                      ||+++++++|+++|+||+++||+++++++.+++  ++|+++.++|.+++|++|+.++++.             +. .+.+
T Consensus        82 ~E~~~~~~~q~~~E~iH~~sYs~i~~~~~~~~~~~~~~~~~~~~~~i~~k~~~~~~~~~~-------------~~-~~~~  147 (284)
T d3dhza1          82 MHEEAVYTNIAFMESVHAKSYSNIFMTLASTPQINEAFRWSEENENLQRKAKIIMSYYNG-------------DD-PLKK  147 (284)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHCHHHHHHHHHHHHHHTS-------------SC-HHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------HH-HHHH
T ss_conf             899999999999998889999999987236757899999998778888777899998633-------------68-9999


Q ss_pred             HHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
Q ss_conf             99997400014441147889989975980128999999985666669999999997655375422067899999999999
Q gi|254780845|r  189 LFVFYVVFEGMWFYTGFAQILSLGRANKMVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEA  268 (352)
Q Consensus       189 ~i~~~~~lEGi~Fys~Fa~~~~l~~~g~m~g~~~~i~~I~RDE~lH~~f~~~l~~~l~~E~p~l~~~~~~~~i~~~~~ea  268 (352)
                      . ++++++||++|||||+++++|+++|+|+|+|+++++|+|||++|+.|++.+++++++|.|+.+++++++++++++.+|
T Consensus       148 ~-va~~~~EGi~F~s~F~~~~~l~~~g~m~g~~~~i~~I~RDE~lH~~f~~~l~~~~~~e~~~~~~~e~~~~i~~~~~~a  226 (284)
T d3dhza1         148 K-VASTLLESFLFYSGFYLPMYLSSRAKLTNTADIIRLIIRDESVHGYYIGYKYQQGVKKLSEAEQEEYKAYTFDLMYDL  226 (284)
T ss_dssp             H-HHHHHHHHTTTHHHHHHHHHHHTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             H-HHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf             9-999999999990709999998762115569999999998777777899999987504132555677799999999999


Q ss_pred             HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-CHHHHHHHH
Q ss_conf             98768868875188847999899999999999999997887988999888-325789971
Q gi|254780845|r  269 TLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN-PFPWMSEVI  327 (352)
Q Consensus       269 ve~E~~~~~~~~~~~~~Gl~~~~~~~yi~y~an~rL~~lG~~~~f~~~~n-P~~W~~~~~  327 (352)
                      |++|++|++++|+.  +|++ +++++||+|+||+||.+||++|+|+.++. .-||+...+
T Consensus       227 ve~E~~~~~~~~~~--~gl~-~~~~~yiky~an~~L~~lG~~~~f~~~~~~~nP~~~~~~  283 (284)
T d3dhza1         227 YENEIEYTEDIYDD--LGWT-EDVKRFLRYNANKALNNLGYEGLFPTDETKVSPAILSSL  283 (284)
T ss_dssp             HHHHHHHHHHHHTT--TTCH-HHHHHHHHHHHHHHHHHTTCCCSSCGGGCCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHC--CCCH-HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCC
T ss_conf             99999999998742--5749-999999999999999978899999985577887888224


SCOP domain information

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ribonucleotide reductase-like
domain: Ribonucleotide reductase R2
species: Corynebacterium ammoniagenes [TaxId: 1697]