HHsearch alignment for GI: 254780846 and conserved domain: TIGR01510
>TIGR01510 coaD_prev_kdtB pantetheine-phosphate adenylyltransferase; InterPro: IPR001980 Temperature-sensitive mutants of Escherichia coli, defective in the transfer of 3-deoxy-D-manno-octulosonic acid (KDO) from CMP-KDO to a tetraacyldisaccharide 1,4'-bisphosphate precursor of lipid A, have been used to map KDO transferase activity on the E. coli chromosome . The KDO transferase gene, designated kdtA, was shown to code for a 43kDa polypeptide. Overexpression of this single gene product greatly stimulates incorporation of two stereochemically distinct KDO residues during lipopolysaccharide biosynthesis in extracts of E. coli . From these experiments this protein was thought to play a role in lipopolysaccharide biosynthesis, however now it is annotated as phosphopantetheine adenylyltransferase (2.7.7.3 from EC), which catalyses the reversible transfer of an adenylyl group from ATP to 4'-phosphopantetheine to give dephospho-CoA (DPCOA) and pyrophosphate in the fourth (and penultimate) step of coenzyme A biosynthesis .; GO: 0004595 pantetheine-phosphate adenylyltransferase activity, 0015937 coenzyme A biosynthetic process.
Probab=97.89 E-value=9.9e-06 Score=58.11 Aligned_cols=128 Identities=21% Similarity=0.244 Sum_probs=79.3
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHC---CC---CCCCCCC
Q ss_conf 99993156502899999999999502797799983798689847888662000078999988511---31---0002256
Q gi|254780846|r 21 VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM---GF---SALIRYK 94 (324)
Q Consensus 21 vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~---Gi---d~vi~~~ 94 (324)
T Consensus 2 A~YPGSFDP~T~GHLDiikRa~~lFDeV~Vav-~--------~N~~K~--~~f~~eeR~~~~~~~tk~~l~~~~NV~V~~ 70 (163)
T TIGR01510 2 ALYPGSFDPITNGHLDIIKRALKLFDEVIVAV-A--------INPSKK--PLFSLEERVELIEDATKKHLKKIPNVEVDV 70 (163)
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHCCEEEEEE-E--------ECCCCC--CCCCHHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf 55488899874363889999986221777888-8--------748898--568989999999999999723698148984
Q ss_pred CHHHHHHCCCHHHHHHHHCCCCCEEEEEEC----CCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHCCCCCCCCHHHH
Q ss_conf 405775228302688862142780299983----4553033775560246775101264167615223023330230368
Q gi|254780846|r 95 FTLETANYSAEQFIQKVLVEWLEVKTVITG----TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170 (324)
Q Consensus 95 F~~~~a~ls~e~Fi~~iL~~~l~~k~ivVG----~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~~~~~~~~ISSt~I 170 (324)
T Consensus 71 f~~--------~L~Vd-~Ak~~~a~~ivRGlR~~~DFEYE~~~~~~N~~---L--a~eieTVFL~~~~~~--~~~SSs~V 134 (163)
T TIGR01510 71 FDG--------RLLVD-YAKELGATFIVRGLRAVTDFEYELQMALMNQK---L--APEIETVFLMASPEY--AAVSSSLV 134 (163)
T ss_pred CCC--------CEEEE-EHHHCCCEEEEEECCCCCHHHHHHHHHHHHHH---H--CCCCCEEEECCCCCH--HHHHHHHH
T ss_conf 067--------12121-01366870898601476607899999999997---5--579868972787223--66676788
Q ss_pred HHHHH
Q ss_conf 99987
Q gi|254780846|r 171 RTALT 175 (324)
Q Consensus 171 R~~l~ 175 (324)
T Consensus 135 ke~~~ 139 (163)
T TIGR01510 135 KEIAS 139 (163)
T ss_pred HHHHC
T ss_conf 87507