HHsearch alignment for GI: 254780846 and conserved domain: cd02166

>cd02166 NMNAT_Archaea This family of archaeal proteins exhibits nicotinamide-nucleotide adenylyltransferase (NMNAT) activity utilizing the salvage pathway to synthesize NAD. In some cases, the enzyme was tested and found also to have the activity of nicotinate-nucleotide adenylyltransferase an enzyme of NAD de novo biosynthesis, although with a higher Km. In some archaeal species, a number of proteins which are uncharacterized with respect to activity, are also present.
Probab=98.37  E-value=4.5e-06  Score=60.33  Aligned_cols=132  Identities=12%  Similarity=0.196  Sum_probs=73.0

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHH----HHCCCCC--CCCCC
Q ss_conf             99993156502899999999999502797799983798689847888662000078999988----5113100--02256
Q gi|254780846|r   21 VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL----EKMGFSA--LIRYK   94 (324)
Q Consensus        21 vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l----~~~Gid~--vi~~~   94 (324)
T Consensus         2 ~~~~GrFqP~h~GHl~~i~~a~~~~d~~ii-~igs~~~~~----~~~---NPft~~ER~~Mi~~al~~~~~~~~~~~ivp   73 (163)
T cd02166           2 ALFIGRFQPFHLGHLQVIKWILEEVDELII-GIGSAQESH----TLR---NPFTAGERVLMIRKALEEAGIDLSRYYIIP   73 (163)
T ss_pred             CEEEECCCCCCHHHHHHHHHHHHHCCEEEE-EECCCCCCC----CCC---CCCCHHHHHHHHHHHHHHCCCCCCEEEEEE
T ss_conf             458704599867899999999974892799-977786677----788---998899999999999996698765189985


Q ss_pred             CHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHCCCCCCCCHHHHHHHH
Q ss_conf             40577522830268886214278029998345530337755602467751012641676152230233302303689998
Q gi|254780846|r   95 FTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL  174 (324)
Q Consensus        95 F~~~~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~~~~~~~~ISSt~IR~~l  174 (324)
T Consensus        74 i~-Di~--~~~~wv~~-v-~~~~p~~~~~-----~----s~~-~~v~~lf~~~g~~V~~~p~~---~r~~~SsT~IR~~~  135 (163)
T cd02166          74 VP-DIE--TNALWVGY-V-KSLTPPFDVV-----Y----SGN-PLVARLFKEAGYEVRRPPMF---NRDEYSGTEIRRLM  135 (163)
T ss_pred             CC-CCC--CHHHHHHH-H-HHHCCCEEEE-----E----ECC-HHHHHHHHHCCCEEECCCCC---CCCCCCHHHHHHHH
T ss_conf             66-544--07789999-9-9738972799-----8----187-89999888819928646752---46755389999999


Q ss_pred             HHHH
Q ss_conf             7258
Q gi|254780846|r  175 TKGH  178 (324)
Q Consensus       175 ~~Gd  178 (324)
T Consensus       136 ~~g~  139 (163)
T cd02166         136 LGDE  139 (163)
T ss_pred             HCCC
T ss_conf             8699