HHsearch alignment for GI: 254780846 and conserved domain: cd02166
>cd02166 NMNAT_Archaea This family of archaeal proteins exhibits nicotinamide-nucleotide adenylyltransferase (NMNAT) activity utilizing the salvage pathway to synthesize NAD. In some cases, the enzyme was tested and found also to have the activity of nicotinate-nucleotide adenylyltransferase an enzyme of NAD de novo biosynthesis, although with a higher Km. In some archaeal species, a number of proteins which are uncharacterized with respect to activity, are also present.
Probab=98.37 E-value=4.5e-06 Score=60.33 Aligned_cols=132 Identities=12% Similarity=0.196 Sum_probs=73.0
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHH----HHCCCCC--CCCCC
Q ss_conf 99993156502899999999999502797799983798689847888662000078999988----5113100--02256
Q gi|254780846|r 21 VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL----EKMGFSA--LIRYK 94 (324)
Q Consensus 21 vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l----~~~Gid~--vi~~~ 94 (324)
T Consensus 2 ~~~~GrFqP~h~GHl~~i~~a~~~~d~~ii-~igs~~~~~----~~~---NPft~~ER~~Mi~~al~~~~~~~~~~~ivp 73 (163)
T cd02166 2 ALFIGRFQPFHLGHLQVIKWILEEVDELII-GIGSAQESH----TLR---NPFTAGERVLMIRKALEEAGIDLSRYYIIP 73 (163)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCEEEE-EECCCCCCC----CCC---CCCCHHHHHHHHHHHHHHCCCCCCEEEEEE
T ss_conf 458704599867899999999974892799-977786677----788---998899999999999996698765189985
Q ss_pred CHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHCCCCCCCCHHHHHHHH
Q ss_conf 40577522830268886214278029998345530337755602467751012641676152230233302303689998
Q gi|254780846|r 95 FTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174 (324)
Q Consensus 95 F~~~~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~~~~~~~~ISSt~IR~~l 174 (324)
T Consensus 74 i~-Di~--~~~~wv~~-v-~~~~p~~~~~-----~----s~~-~~v~~lf~~~g~~V~~~p~~---~r~~~SsT~IR~~~ 135 (163)
T cd02166 74 VP-DIE--TNALWVGY-V-KSLTPPFDVV-----Y----SGN-PLVARLFKEAGYEVRRPPMF---NRDEYSGTEIRRLM 135 (163)
T ss_pred CC-CCC--CHHHHHHH-H-HHHCCCEEEE-----E----ECC-HHHHHHHHHCCCEEECCCCC---CCCCCCHHHHHHHH
T ss_conf 66-544--07789999-9-9738972799-----8----187-89999888819928646752---46755389999999
Q ss_pred HHHH
Q ss_conf 7258
Q gi|254780846|r 175 TKGH 178 (324)
Q Consensus 175 ~~Gd 178 (324)
T Consensus 136 ~~g~ 139 (163)
T cd02166 136 LGDE 139 (163)
T ss_pred HCCC
T ss_conf 8699