HHsearch alignment for GI: 254780846 and conserved domain: pfam06574

>pfam06574 FAD_syn FAD synthetase. This family corresponds to the N terminal domain of the bifunctional enzyme riboflavin kinase / FAD synthetase. These enzymes have both ATP:riboflavin 5'-phospho transferase and ATP:FMN-adenylyltransferase activity. They catalyse the 5'-phosphorylation of riboflavin to FMN and the adenylylation of FMN to FAD. This domain is thought to have the flavin mononucleotide (FMN) adenylyltransferase activity.
Probab=100.00  E-value=0  Score=335.26  Aligned_cols=156  Identities=38%  Similarity=0.679  Sum_probs=147.9

Q ss_pred             CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHC--CCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCC
Q ss_conf             7610188499993156502899999999999502--79779998379868984788866200007899998851131000
Q gi|254780846|r   13 LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSAL   90 (324)
Q Consensus        13 ~p~~~~~~vvtiG~FDGvH~GHq~Li~~~~~~a~--~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~Gid~v   90 (324)
T Consensus         1 ~~~~~~~svvtiG~FDGvH~GHq~li~~~~~~a~~~~~~~~viTF~phP~~~l~~~~~~~~l~~~~~K~~~l~~~Gid~~   80 (158)
T pfam06574         1 LPEDPRGSVVTIGNFDGVHLGHQALIAHAKEIARELGLPSVVVTFEPHPREVFAPDKAPERLTTLREKIELLAELGVDRL   80 (158)
T ss_pred             CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCHHCCCHHHHHHHHHHCCCCEE
T ss_conf             99888981999974653158999999999999998299789999649877860876664101579999999996699999


Q ss_pred             CCCCCHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHCCCCCCCCHHH
Q ss_conf             2256405775228302688862142780299983455303377556024677510126416761522302333023036
Q gi|254780846|r   91 IRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSN  169 (324)
Q Consensus        91 i~~~F~~~~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~~~~~~~~ISSt~  169 (324)
T Consensus        81 ~~i~F~~~~~~ls~e~Fi~~iL~~~l~~~~ivvG~df~FG~~r~G~~~~L~~~~~~~g~~v~~i~~~~~-~~~~ISSTR  158 (158)
T pfam06574        81 LVLPFDKEFAKLSAEEFIENILVKGLGAKHVVVGFDFRFGKGRAGDVELLKELGAKYGFEVTVVPPVTL-DGEKISSTR  158 (158)
T ss_pred             EEEHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCEEE-CCEEECCCC
T ss_conf             982257998749999999999871676248997365015799987999999999876948999698972-991776889