HHsearch results for GI: 254780846 and protein with PDBid: 1f9a_A

>1f9a_A Hypothetical protein MJ0541; alpha/beta, transferase, structural genomics; HET: ATP; 2.00A {Methanocaldococcus jannaschii} SCOP: c.26.1.3
Probab=99.16  E-value=4e-11  Score=91.80  Aligned_cols=134  Identities=10%  Similarity=0.161  Sum_probs=73.3

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHH
Q ss_conf             99993156502899999999999502797799983798689847888662000078999988511310002256405775
Q gi|254780846|r   21 VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETA  100 (324)
Q Consensus        21 vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~Gid~vi~~~F~~~~a  100 (324)
                      ++.+|.||++|.||+.++++|.+.+..   +++.+.+.+.     ......+.+.++|.++++..--+.-....+.. ..
T Consensus         3 gi~~GsFdP~H~GH~~li~~a~~~~d~---v~v~~~~~~~-----~~~~~~~~~~~~R~~mi~~~~~~~~~~~~~~~-~~   73 (168)
T 1f9a_A            3 GFIIGRFQPFHKGHLEVIKKIAEEVDE---IIIGIGSAQK-----SHTLENPFTAGERILMITQSLKDYDLTYYPIP-IK   73 (168)
T ss_dssp             EEEEECCTTCCHHHHHHHHHHTTTCSE---EEEEECSTTC-----CSSSSCCSCHHHHHHHHHHHHTTSSCEEEEEE-CC
T ss_pred             EEEECCCCCCCHHHHHHHHHHHHHCCC---CEEEECCCCC-----CCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEE-CC
T ss_conf             899524598999999999999997897---4898047860-----13678888999999999999876796089840-46


Q ss_pred             HCC-CHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHCCCCCCCCHHHHHHHHHHHH
Q ss_conf             228-302688862142780299983455303377556024677510126416761522302333023036899987258
Q gi|254780846|r  101 NYS-AEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH  178 (324)
Q Consensus       101 ~ls-~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~~~~~~~~ISSt~IR~~l~~Gd  178 (324)
                      ..+ +...+.. +.      .+..+.++.||.+.     ....+.+..|+++..++..   ....||||.||+++..|+
T Consensus        74 ~~~~~~~~~~~-~~------~~~~~~~~~~~~~~-----~~~~~~~~~~~~v~~~~~~---~~~~ISST~IR~~i~~g~  137 (168)
T 1f9a_A           74 DIEFNSIWVSY-VE------SLTPPFDIVYSGNP-----LVRVLFEERGYEVKRPEMF---NRKEYSGTEIRRRMLNGE  137 (168)
T ss_dssp             CCSCGGGHHHH-HH------HHSCCCSEEECCCH-----HHHHHHHHTTCEEECCCCC---STTTSSHHHHHHHHHHTC
T ss_pred             CCCHHHHHHHH-HH------HHCCCEEEEECCCH-----HHHHHHHCCCCEEEEECCC---CCCCCCHHHHHHHHHCCC
T ss_conf             64207789999-98------72586799987709-----9998876489869983244---666766799999998599