HHsearch results for GI: 254780846 and protein with PDBid: 1kam_A
>1kam_A Deamido-NAD(+), nicotinate-nucleotide adenylyltransferase; rossman fold; 2.10A {Bacillus subtilis} SCOP: c.26.1.3 PDB: 1kaq_A*
Probab=98.63 E-value=5.2e-07 Score=65.01 Aligned_cols=147 Identities=16% Similarity=0.019 Sum_probs=65.8
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHH
Q ss_conf 99993156502899999999999502797799983798689847888662000078999988511310002256405775
Q gi|254780846|r 21 VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETA 100 (324)
Q Consensus 21 vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~Gid~vi~~~F~~~~a 100 (324)
+|--|.||.+|+||+++++.|.+..... .+++...+.|..-... .......+...+.....+.......+.++.
T Consensus 10 aifgGSFdP~H~GH~~ii~~a~~~~~~~-~v~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 83 (194)
T 1kam_A 10 GIFGGTFDPPHNGHLLMANEVLYQAGLD-EIWFMPNQIPPHKQNE-----DYTDSFHRVEMLKLAIQSNPSFKLELVEME 83 (194)
T ss_dssp EEEEECCSSCCHHHHHHHHHHHHHTTCS-EEEEEECCCC--------------CHHHHHHHHHHHHTTCTTEEECCGGGS
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHCCCC-EEEEEECCCCCCCCCC-----HHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
T ss_conf 9956475848799999999999985997-8999963566633342-----057999999987664227764200047876
Q ss_pred HCCCH------HHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCH----------HHCCCCCC
Q ss_conf 22830------268886214278029998345530337755602467751012641676152----------23023330
Q gi|254780846|r 101 NYSAE------QFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDE----------LRNNKSQI 164 (324)
Q Consensus 101 ~ls~e------~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~----------~~~~~~~~ 164 (324)
...+. ..+.... .. .....++|.|..+........+.+-..+. +.+..... ........
T Consensus 84 ~~~~~~t~~~l~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (194)
T 1kam_A 84 REGPSYTFDTVSLLKQRY-PN-DQLFFIIGADMIEYLPKWYKLDELLNLIQ---FIGVKRPGFHVETPYPLLFADVPEFE 158 (194)
T ss_dssp TTCCCSHHHHHHHHHHHS-TT-SEEEEEEETTTTTTCCCCHHHHHHHHHSE---EEEEECSSCCCCCSSCCEEEECCCBC
T ss_pred CCCCEEEHHHHHHHHHHC-CC-CCCEEHHHHHHHHHHHHHHHHHHHHHHHH---HHHHCCCCCCCCCCCCEEECCCCCCC
T ss_conf 468636455677899864-88-64000011667888762404999999715---77543754330001010014565565
Q ss_pred CCHHHHHHHHHHHH
Q ss_conf 23036899987258
Q gi|254780846|r 165 VSSSNIRTALTKGH 178 (324)
Q Consensus 165 ISSt~IR~~l~~Gd 178 (324)
||||.||++|..|.
T Consensus 159 ISST~IR~~i~~~~ 172 (194)
T 1kam_A 159 VSSTMIRERFKSKK 172 (194)
T ss_dssp CCHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHCCC
T ss_conf 66799999998399