HHsearch results for GI: 254780846 and protein with PDBid: 3hl4_A
>3hl4_A Choline-phosphate cytidylyltransferase A; rossmann fold, phospholipid synthesis, phosphatidylcholine, phosphocholine, CTP, CDP-choline; HET: CDC; 2.20A {Rattus norvegicus}
Probab=99.14 E-value=2.3e-10 Score=86.83 Aligned_cols=149 Identities=17% Similarity=0.118 Sum_probs=97.0
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHC-CCCCCCCCCCHHHH
Q ss_conf 99993156502899999999999502797799983798689847888662000078999988511-31000225640577
Q gi|254780846|r 21 VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM-GFSALIRYKFTLET 99 (324)
Q Consensus 21 vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~-Gid~vi~~~F~~~~ 99 (324)
|.|-|.||.+|.||..+|++|++.+.+..++|-... .+.....+. ..+.+.++|...+.++ .||.++.-. +
T Consensus 79 Vyv~G~FDLfH~GHi~lL~~AK~l~~gd~LIVGV~s---De~i~k~Kg-~pi~~~~eR~~~l~~~r~VD~VI~~~--p-- 150 (236)
T 3hl4_A 79 VYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCS---DELTHNFKG-FTVMNENERYDAVQHCRYVDEVVRNA--P-- 150 (236)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHTSSSSEEEEEEECC---HHHHHHHTC-CCSSCHHHHHHHHHTBTTCSEEESSC--C--
T ss_pred EEEECEECCCCHHHHHHHHHHHHCCCCCEEEEEECC---HHHHHHCCC-CCCCCHHHHHHHHHHCCCCCCCCCCC--C--
T ss_conf 999451588898999999999605998989999777---899985699-99999999999865214553522489--8--
Q ss_pred HHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 52283026888621427802999834553033775560246775101264167615223023330230368999872589
Q gi|254780846|r 100 ANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179 (324)
Q Consensus 100 a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~~~~~~~~ISSt~IR~~l~~Gdi 179 (324)
.-...+|++ .+++..++.|.|+.++.+...-...+++.|+ +..++- . .-||||.|.+-|....-
T Consensus 151 -~~~~~~~l~-----~~~~d~vv~gdd~~~~~~~~~~~~~~k~~g~-----~~~i~r--t---~giSTT~II~RI~~~~d 214 (236)
T 3hl4_A 151 -WTLTPEFLA-----EHRIDFVAHDDIPYSSAGSDDVYKHIKEAGM-----FAPTQR--T---EGISTSDIITRIVRDYD 214 (236)
T ss_dssp -SSCCHHHHH-----HTTCCEEEEESSCCCCSSCSCTTHHHHHTTC-----EEEECC--C---TTCCHHHHHHHHHHHHH
T ss_pred -CCCCHHHHH-----HHCCCEEEECCCCCCCCCCHHHHHHHHHCCE-----EEEECC--C---CCCCHHHHHHHHHHHHH
T ss_conf -556299998-----7299789868964427771559999873899-----999789--9---88239999999998799
Q ss_pred HHHHHHHHHCCHHH
Q ss_conf 99998500000000
Q gi|254780846|r 180 LNAAHLLGYRFTIE 193 (324)
Q Consensus 180 ~~an~lLGr~y~i~ 193 (324)
...++-|.|.|+-.
T Consensus 215 ~y~~rnl~rg~~~k 228 (236)
T 3hl4_A 215 VYARRNLQRGYTAK 228 (236)
T ss_dssp C-------------
T ss_pred HHHHHHHHCCCCHH
T ss_conf 99999986671277