Query gi|254780846|ref|YP_003065259.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 324
No_of_seqs 148 out of 2493
Neff 6.2
Searched_HMMs 23785
Date Tue May 31 21:47:29 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780846.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2x0k_A Riboflavin biosynthesis 100.0 0 0 715.5 22.1 310 1-316 1-325 (338)
2 3op1_A Macrolide-efflux protei 100.0 0 0 676.4 23.0 299 1-308 4-307 (308)
3 1mrz_A Riboflavin kinase/FMN a 100.0 0 0 628.0 16.7 281 21-314 2-286 (293)
4 1n08_A Putative riboflavin kin 100.0 1.8E-42 0 295.7 7.5 130 188-319 22-157 (163)
5 1nb0_A Hypothetical protein FL 100.0 7.7E-42 0 291.6 6.9 130 189-319 4-139 (147)
6 3bnw_A Riboflavin kinase, puta 100.0 8.2E-41 2.8E-45 284.9 5.4 132 185-317 11-159 (181)
7 1lw7_A Transcriptional regulat 99.9 8.6E-27 3.6E-31 193.7 -0.3 188 18-212 2-200 (365)
8 3do8_A Phosphopantetheine aden 99.6 6.4E-16 2.7E-20 123.0 1.9 145 22-186 4-148 (148)
9 3glv_A Lipopolysaccharide core 99.5 1.6E-14 6.8E-19 113.9 7.8 134 21-177 5-138 (143)
10 2b7l_A Glycerol-3-phosphate cy 99.4 1.1E-12 4.8E-17 101.8 9.7 128 20-179 3-131 (132)
11 1coz_A Protein (glycerol-3-pho 99.3 1.6E-11 6.6E-16 94.4 9.9 125 20-176 3-128 (129)
12 1f9a_A Hypothetical protein MJ 99.2 4E-11 1.7E-15 91.8 6.3 134 21-178 3-137 (168)
13 1ej2_A Nicotinamide mononucleo 99.1 2.3E-12 9.9E-17 99.8 -0.6 158 21-206 6-169 (181)
14 3hl4_A Choline-phosphate cytid 99.1 2.3E-10 9.7E-15 86.8 9.4 149 21-193 79-228 (236)
15 3elb_A Ethanolamine-phosphate 99.0 3E-09 1.3E-13 79.6 9.2 131 20-176 9-140 (341)
16 3n8h_A Pantothenate synthetase 98.9 2.2E-09 9E-14 80.5 5.0 169 1-185 4-205 (264)
17 3elb_A Ethanolamine-phosphate 98.9 1.3E-08 5.3E-13 75.5 8.9 141 15-177 195-337 (341)
18 2ejc_A Pantoate--beta-alanine 98.8 9.1E-09 3.8E-13 76.4 8.1 172 1-186 1-203 (280)
19 3ag6_A Pantothenate synthetase 98.8 4.2E-09 1.8E-13 78.6 6.3 168 1-185 2-203 (283)
20 3mxt_A Pantothenate synthetase 98.8 7.1E-09 3E-13 77.2 7.0 166 1-184 4-203 (285)
21 1v8f_A Pantoate-beta-alanine l 98.8 1.3E-08 5.6E-13 75.4 7.3 167 1-184 1-197 (276)
22 3inn_A Pantothenate synthetase 98.8 8.6E-09 3.6E-13 76.6 6.3 165 1-182 22-220 (314)
23 2h29_A Probable nicotinate-nuc 98.7 1.1E-07 4.6E-12 69.4 10.8 145 22-178 6-167 (189)
24 3cov_A Pantothenate synthetase 98.7 3.8E-08 1.6E-12 72.4 6.4 168 1-184 12-213 (301)
25 1kam_A Deamido-NAD(+), nicotin 98.6 5.2E-07 2.2E-11 65.0 11.4 147 21-178 10-172 (194)
26 1iho_A Pantoate--beta-alanine 98.6 2.4E-08 1E-12 73.7 4.5 168 1-185 1-204 (283)
27 3h05_A Uncharacterized protein 98.6 4E-07 1.7E-11 65.7 9.4 136 21-178 5-150 (177)
28 3gmi_A UPF0348 protein MJ0951; 98.6 1.9E-07 8E-12 67.9 7.6 99 18-126 52-152 (357)
29 1yum_A 'probable nicotinate-nu 98.4 3.9E-06 1.6E-10 59.3 11.7 96 22-127 27-130 (242)
30 1nup_A FKSG76; NAD biosynthesi 98.4 1.9E-06 7.9E-11 61.4 8.8 69 22-95 10-83 (252)
31 2qjo_A Bifunctional NMN adenyl 98.3 3E-06 1.3E-10 60.1 8.9 58 20-85 9-66 (341)
32 2qjt_B Nicotinamide-nucleotide 98.3 3.8E-06 1.6E-10 59.4 8.1 137 19-179 8-155 (352)
33 2qtr_A Nicotinate (nicotinamid 98.2 5.2E-06 2.2E-10 58.5 8.1 145 21-178 5-167 (189)
34 1kqn_A Nmnat, nicotinamide mon 98.2 4.3E-06 1.8E-10 59.1 7.6 69 22-95 12-85 (279)
35 3k9w_A Phosphopantetheine aden 98.1 1.4E-05 5.7E-10 55.8 8.5 38 20-60 7-44 (170)
36 1od6_A PPAT, phosphopantethein 98.1 2.4E-05 9.9E-10 54.2 9.5 136 21-177 3-139 (160)
37 1vlh_A Phosphopantetheine aden 98.1 1.5E-05 6.3E-10 55.5 8.1 136 21-178 15-150 (173)
38 3f3m_A Phosphopantetheine aden 98.1 2.1E-05 8.6E-10 54.6 8.6 148 22-193 7-162 (168)
39 3nbk_A Phosphopantetheine aden 98.0 2.2E-05 9E-10 54.5 7.8 28 19-46 22-49 (177)
40 1qjc_A Phosphopantetheine aden 97.7 0.00034 1.4E-08 46.7 10.2 27 19-45 2-28 (158)
41 1o6b_A Phosphopantetheine aden 97.7 0.00046 1.9E-08 45.9 10.8 26 21-46 5-30 (169)
42 3guz_A Pantothenate synthetase 97.7 8.5E-06 3.6E-10 57.1 1.3 90 1-96 1-96 (176)
43 1k4m_A NAMN adenylyltransferas 97.6 0.0004 1.7E-08 46.2 9.6 35 22-56 7-42 (213)
44 1m8p_A Sulfate adenylyltransfe 97.1 0.0013 5.6E-08 42.8 6.8 163 19-191 191-390 (573)
45 1g8f_A Sulfate adenylyltransfe 97.0 0.0082 3.4E-07 37.7 10.4 162 19-191 189-389 (511)
46 1v47_A ATP sulfurylase; produc 96.9 0.028 1.2E-06 34.2 12.0 148 19-179 156-331 (349)
47 2gks_A Bifunctional SAT/APS ki 96.9 0.0026 1.1E-07 40.9 6.8 161 19-191 164-366 (546)
48 1jhd_A Sulfate adenylyltransfe 96.7 0.025 1.1E-06 34.5 10.8 163 19-191 193-392 (396)
49 3cr8_A Sulfate adenylyltranfer 96.6 0.015 6.2E-07 36.0 8.9 164 19-190 164-362 (552)
50 1r6x_A ATP:sulfate adenylyltra 96.5 0.023 9.6E-07 34.8 9.6 161 19-190 188-387 (395)
51 1x6v_B Bifunctional 3'-phospho 95.7 0.13 5.6E-06 29.9 10.8 164 19-191 413-619 (630)
52 2j6v_A UV endonuclease, UVDE; 67.5 3.7 0.00015 20.5 3.1 112 35-152 102-219 (301)
53 2bdq_A Copper homeostasis prot 57.1 9.6 0.0004 17.7 3.7 41 131-177 159-199 (224)
54 1p5d_X PMM, phosphomannomutase 54.8 4.9 0.00021 19.6 1.9 29 104-133 184-214 (463)
55 1ht6_A AMY1, alpha-amylase iso 48.5 11 0.00044 17.5 2.8 26 31-56 64-90 (405)
56 1hvx_A Alpha-amylase; hydrolas 47.7 14 0.00059 16.7 3.6 26 31-56 77-103 (515)
57 1xi3_A Thiamine phosphate pyro 45.4 15 0.00064 16.4 3.4 14 186-199 127-140 (215)
58 1h5y_A HISF; histidine biosynt 43.4 14 0.00057 16.8 2.7 51 73-130 87-137 (253)
59 3cta_A Riboflavin kinase; stru 41.6 7.1 0.0003 18.6 1.0 103 178-288 81-210 (230)
60 1dku_A Protein (phosphoribosyl 37.2 20 0.00086 15.6 5.2 144 4-158 41-200 (317)
61 3lx4_A Fe-hydrogenase; HYDA, H 36.5 21 0.00088 15.5 4.1 86 22-111 20-109 (457)
62 3ju2_A Uncharacterized protein 35.4 22 0.00092 15.4 4.2 81 73-156 19-105 (284)
63 1jvn_A Glutamine, bifunctional 33.6 15 0.00062 16.5 1.6 26 89-114 189-214 (555)
64 2hcu_A 3-isopropylmalate dehyd 32.2 25 0.001 15.1 2.6 39 115-157 83-121 (213)
65 2gti_A Replicase polyprotein 1 31.3 7.7 0.00032 18.4 -0.1 11 79-89 70-80 (370)
66 3bc9_A AMYB, alpha amylase, ca 27.9 29 0.0012 14.6 3.7 23 75-97 152-174 (599)
67 3h5j_A 3-isopropylmalate dehyd 27.6 29 0.0012 14.6 2.6 47 106-157 54-100 (171)
68 2is3_A Ribonuclease T; RNAse, 26.9 25 0.0011 15.0 1.9 73 106-188 101-173 (215)
69 1qho_A Alpha-amylase; glycosid 25.3 11 0.00046 17.4 -0.2 25 31-55 103-128 (686)
70 3bp1_A NADPH-dependent 7-cyano 24.4 33 0.0014 14.2 3.4 22 283-306 230-251 (290)
71 3bh4_A Alpha-amylase; calcium, 24.0 34 0.0014 14.2 3.5 24 31-54 74-98 (483)
72 2wq7_A RE11660P; lyase-DNA com 23.9 34 0.0014 14.2 4.1 92 51-154 65-159 (543)
73 1ka9_F Imidazole glycerol phos 22.4 29 0.0012 14.6 1.5 23 76-98 34-56 (252)
74 2z1k_A (NEO)pullulanase; hydro 21.6 15 0.00065 16.4 -0.1 26 31-56 92-118 (475)
75 3hv0_A Tryptophanyl-tRNA synth 20.7 40 0.0017 13.7 2.7 41 18-58 73-118 (393)
76 2h85_A Putative ORF1AB polypro 20.6 11 0.00045 17.4 -1.0 30 170-199 212-245 (347)
77 2wsk_A Glycogen debranching en 20.1 33 0.0014 14.3 1.4 73 75-152 181-259 (657)
No 1
>2x0k_A Riboflavin biosynthesis protein RIBF; riboflavin kinase, nucleotide-binding, transferase, ATP-binding, multifunctional enzyme; 1.95A {Corynebacterium ammoniagenes}
Probab=100.00 E-value=0 Score=715.50 Aligned_cols=310 Identities=28% Similarity=0.508 Sum_probs=287.7
Q ss_pred CEEECCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHC--CCCEEEEEECCCHHHHHCCCCCCCCCCHHHHH
Q ss_conf 9422488521127610188499993156502899999999999502--79779998379868984788866200007899
Q gi|254780846|r 1 MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78 (324)
Q Consensus 1 Mki~~~~~~~~~~p~~~~~~vvtiG~FDGvH~GHq~Li~~~~~~a~--~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k 78 (324)
|||||++ .++|.+.++||||||+|||||+|||+||+++++.|+ +.+++|+||+|||+.++.++..+.+|++.++|
T Consensus 1 M~i~~~~---~~ip~~~~~svvtIG~FDGvHlGHq~Li~~~~~~A~~~~~~~~viTF~phP~~~~~~~~~~~~l~~~~ek 77 (338)
T 2x0k_A 1 MDIWYGT---AAVPKDLDNSAVTIGVFDGVHRGHQKLINATVEKAREVGAKAIMVTFDPHPVSVFLPRRAPLGITTLAER 77 (338)
T ss_dssp CEEEESG---GGSCTTCCCEEEEESCCTTCCHHHHHHHHHHHHHHHHHTCEEEEEEESSCHHHHHSTTCSCCBSSCHHHH
T ss_pred CEEEECH---HHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCCCCCHHHHHHHHH
T ss_conf 9799566---6778446991999972733248999999999999997299889999459899980976775012457999
Q ss_pred HHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHH
Q ss_conf 99885113100022564057752283026888621427802999834553033775560246775101264167615223
Q gi|254780846|r 79 EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELR 158 (324)
Q Consensus 79 ~~~l~~~Gid~vi~~~F~~~~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~~ 158 (324)
.++|+++|+|++++++||+++++|||++|++++|.+.++++.||||+|||||++|+||+++|+++|+.. +.+.+++++.
T Consensus 78 ~~~l~~~gid~~~~i~F~~~~a~ls~e~Fi~~il~~~l~~k~ivvG~Df~FG~~r~G~~~~L~~~~~~~-~~~~~i~~~~ 156 (338)
T 2x0k_A 78 FALAESFGIDGVLVIDFTRELSGTSPEKYVEFLLEDTLHASHVVVGANFTFGENAAGTADSLRQICQSR-LTVDVIDLLD 156 (338)
T ss_dssp HHHHHHTTCSEEEEECTTTSSSSCCHHHHHHHCCCCCTCEEEEEEETTCEESGGGCEEHHHHHHHTTTT-SEEEEECCCE
T ss_pred HHHHHHCCCCEEEEECHHHHHHCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCC-CEEEEEEEEE
T ss_conf 999875499889995027876327988899999873037339999455444300477699999854567-3688641140
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC-CCEEEEEEEEEEHHCCC-CCCHHHHEEEEEE----
Q ss_conf 02333023036899987258999998500000000012210020-11011111211000022-2310110002476----
Q gi|254780846|r 159 NNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKI-GRTLGFPTANMQLSPDI-LLKEGVYAIRFRT---- 232 (324)
Q Consensus 159 ~~~~~~ISSt~IR~~l~~Gdi~~an~lLGr~y~i~G~Vv~G~~~-Gr~lGfPTaNi~~~~~~-~p~~GVY~~~v~~---- 232 (324)
.++++||||+||++|++|||+.||+||||||+|+|+|+||+++ ||+||||||||.+++.. +|+.||||++|.+
T Consensus 157 -~~~~~ISST~IR~~i~~G~i~~A~~lLGr~y~i~G~Vv~G~~~~Gr~lGfPTANl~~~~~~~~P~~GVYa~~v~i~~~~ 235 (338)
T 2x0k_A 157 -DEGVRISSTTVREFLSEGDVARANWALGRHFYVTGPVVRGAGRGGKELGFPTANQYFHDTVALPADGVYAGWLTILPTE 235 (338)
T ss_dssp -ETTEECSHHHHHHHHHTTCHHHHHHHHTSCCEEEEECBCCSSCSSSCTTSCSEEEEECTTBCCCCSEEEEEEEEECSCC
T ss_pred -CCCCEECHHHHHHHHHCCCHHHHHHHCCCCEEEEEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCEEEEEEEEECCC
T ss_conf -5882303899999998698988888669987999999977640664534655002574201467654388999981455
Q ss_pred -------EECCCCCHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf -------3056562110578997267797149999940678551898899994600008874689899999999979999
Q gi|254780846|r 233 -------QDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305 (324)
Q Consensus 233 -------~~~~~~~~v~niG~~PT~~~~~~~~iE~hildf~~dlYg~~i~v~f~~~iR~e~kF~s~~~L~~qI~~D~~~a 305 (324)
.++.+|+||+|||.||||++ ..+++|||||||++||||++|+|+|++|||||+||+|+|+|++||++|++.|
T Consensus 236 ~~~~g~~~~~~~y~g~~niG~~PT~~~-~~~~iE~hildf~~dlYgk~i~V~f~~~iR~e~kF~s~eeL~~QI~~Di~~a 314 (338)
T 2x0k_A 236 APVSGNMEPEVAYAAAISVGTNPTFGD-EQRSVESFVLDRDADLYGHDVKVEFVDHVRAMEKFDSVEQLLEVMAKDVQKT 314 (338)
T ss_dssp SCCEESCCTTCEEEEEEEEEEETTTCT-TEEEEEEEETTCCEECTTCEEEEEEEEEEECCCCCSSHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCEEEEEEECCCCCCCCC-CCEEEEEEECCCCCCCCCCEEEEEEHHHCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 532354478834655887577997589-7478999863788760897799995772379988399999999999999999
Q ss_pred HHHHHHCCCCC
Q ss_conf 99987448721
Q gi|254780846|r 306 RKILESSYPLS 316 (324)
Q Consensus 306 ~~~l~~~~~~~ 316 (324)
|++|++....+
T Consensus 315 k~~l~~~~~~~ 325 (338)
T 2x0k_A 315 RTLLAQDVQAH 325 (338)
T ss_dssp HHHHHHHHHST
T ss_pred HHHHHHHHHHC
T ss_conf 99997555642
No 2
>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae}
Probab=100.00 E-value=0 Score=676.44 Aligned_cols=299 Identities=28% Similarity=0.505 Sum_probs=266.8
Q ss_pred CEEECCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHC--CCCEEEEEECCCHHHHHCCCCCCC--CCCHHH
Q ss_conf 9422488521127610188499993156502899999999999502--797799983798689847888662--000078
Q gi|254780846|r 1 MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIF--TLSPPS 76 (324)
Q Consensus 1 Mki~~~~~~~~~~p~~~~~~vvtiG~FDGvH~GHq~Li~~~~~~a~--~~~~~viTF~p~P~~~~~~~~~~~--~l~~~~ 76 (324)
|-+...+....++.. ..+||||||+|||||+|||+||+++++.|+ +.+++|+||+|||+.++.+..+.. .+++.+
T Consensus 4 ~~i~~~i~~~~~~~~-~~~sVvtIG~FDGvHlGHq~li~~~~~~a~~~~~~~~v~TF~phP~~~~~~~~~~~~~~l~~~~ 82 (308)
T 3op1_A 4 MIITIPIKNQKDIGT-PSDSVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEPYHPDLFLHILNPA 82 (308)
T ss_dssp CCEEEECSSGGGCCC-CSCEEEEESCCSSCCHHHHHHHHHHHHHSSTTCCCEEEEEESSCTHHHHSCCCGGGGCBSSCHH
T ss_pred EEEEEECCCHHHCCC-CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCCCCCHHCCCCCHH
T ss_conf 799996458777589-9994999971721118999999999999998199789997679989983967852311258989
Q ss_pred HHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCH
Q ss_conf 99998851131000225640577522830268886214278029998345530337755602467751012641676152
Q gi|254780846|r 77 IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDE 156 (324)
Q Consensus 77 ~k~~~l~~~Gid~vi~~~F~~~~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~ 156 (324)
+|.++|+++|+|++++++||+++++|||++|++. |.++++++.||||+|||||++|+|+.+ +++.+++++.++++
T Consensus 83 ek~~~l~~~Gid~~~~~~F~~~~a~ls~e~Fi~~-L~~~l~~~~ivvG~DF~FG~~r~g~~~----~~~~~~~~v~~v~~ 157 (308)
T 3op1_A 83 ERERKLKREGVEELYLLDFSSQFASLTAQEFFAT-YIKAMNAKIIVAGFDYTFGSDKKTAED----LKNYFDGEVIIVPP 157 (308)
T ss_dssp HHHHHHHHHTCCEEEEECCCHHHHTCCHHHHHHH-HHHHHTEEEEEEETTCCBTTTTBCSTT----HHHHCSSEEEEECC
T ss_pred HHHHHHHHCCCCEEEEEECCHHHHHCCHHHHHHH-HHHHCCCCEEEECCCCCCCCCHHHHHH----HHHHCCCEEEEECE
T ss_conf 9999998729978999846888850899999999-998558889998888577751034899----98755952898220
Q ss_pred HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEEEEEEHHC-CCCCCHHHHEEEEEEEEC
Q ss_conf 2302333023036899987258999998500000000012210020110111112110000-222310110002476305
Q gi|254780846|r 157 LRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQ 235 (324)
Q Consensus 157 ~~~~~~~~ISSt~IR~~l~~Gdi~~an~lLGr~y~i~G~Vv~G~~~Gr~lGfPTaNi~~~~-~~~p~~GVY~~~v~~~~~ 235 (324)
+.. ++++||||+||++|++||++.||+||||||+++|+|+||+++||+||||||||.+++ .++|++||||++|.+ ++
T Consensus 158 ~~~-~~~~ISST~IR~~l~~G~i~~A~~lLGr~y~i~G~Vv~G~~~Gr~lGfPTaNl~~~~~~~~P~~GVYa~~v~~-~~ 235 (308)
T 3op1_A 158 VED-EKGKISSTRIRQAILDGNVKEAGKLLGAPLPSRGMVVHGNARGRTIGYPTANLVLLDRTYMPADGVYVVDVEI-QR 235 (308)
T ss_dssp CBC-SSCBCCHHHHHHHHHHTCHHHHHHHHSSCCEEEEEEEBCC------CCCCEEEEECSSBCCCCSEEEEEEEEE-TT
T ss_pred EEC-CCCCEEHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEEECCCCHHHCCCCCCCCCCHHHCCCCCCCEEEEEEEE-CC
T ss_conf 321-6861217999999984869899998487874257899677311120877623112131247887189999874-47
Q ss_pred CCCCHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 6562110578997267797149999940678551898899994600008874689899999999979999999
Q gi|254780846|r 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308 (324)
Q Consensus 236 ~~~~~v~niG~~PT~~~~~~~~iE~hildf~~dlYg~~i~v~f~~~iR~e~kF~s~~~L~~qI~~D~~~a~~~ 308 (324)
.+|+||+|||.||||++ .+.++|+|||||++||||+.++|+|++|||+|+||+|+|+|++||++|++.||+|
T Consensus 236 ~~y~gv~niG~rPTf~~-~~~~lE~hildf~~dlYg~~i~V~f~~~iR~E~KF~s~eeL~~QI~~D~~~ar~y 307 (308)
T 3op1_A 236 QKYRAMASVGKNVTFDG-EEARFEVNIFDFNQDIYGETVMVYWLDRIRDMTKFDSVDQLVDQLKADEEVTRNW 307 (308)
T ss_dssp EEEEEEEEECBTTTBC---CCEEEEEETTCCCCCTTCEEEEEEEEEEECCCCCSSHHHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEEECCCCCCCC-CCEEEEEEECCCCCCCCCCEEEEEEHHHCCCCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 64156731036885379-7068999974689300698799991782168888199999999999999998666
No 3
>1mrz_A Riboflavin kinase/FMN adenylyltransferase; rossmann fold, flavin binding domain, 6-stranded beta barrel, nucleotide binding domain; HET: CIT; 1.90A {Thermotoga maritima} SCOP: b.43.5.1 c.26.1.3 PDB: 1s4m_A* 1t6x_A* 1t6y_A* 1t6z_A* 2i1l_A
Probab=100.00 E-value=0 Score=628.02 Aligned_cols=281 Identities=32% Similarity=0.518 Sum_probs=256.6
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHC--CCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHH
Q ss_conf 99993156502899999999999502--7977999837986898478886620000789999885113100022564057
Q gi|254780846|r 21 VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLE 98 (324)
Q Consensus 21 vvtiG~FDGvH~GHq~Li~~~~~~a~--~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~Gid~vi~~~F~~~ 98 (324)
|||||+|||||+|||+||+++++.|+ +.+++++||+|||..+ .++. +..|++.++|+++|+++|+|.+ ++|+ +
T Consensus 2 VvaIG~FDGvH~GHq~Li~~~~~~a~~~~~~~~v~tf~~~p~~~-~~~~-~~~l~~~~~r~~~l~~~g~~~v--i~F~-~ 76 (293)
T 1mrz_A 2 VVSIGVFDGVHIGHQKVLRTMKEIAFFRKDDSLIYTISYPPEYF-LPDF-PGLLMTVESRVEMLSRYARTVV--LDFF-R 76 (293)
T ss_dssp CEEEECCTTCCHHHHHHHHHHHHHHHHHTCCCEEEEESSCGGGG-STTC-CCBSSCHHHHHHHHTTTSCEEE--ECHH-H
T ss_pred EEEEECCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH-CCCC-CCCCCCHHHHHHHHHHHCCCEE--EEHH-H
T ss_conf 99995062013899999999999999709996999959697996-9999-4014899999999987288145--4035-4
Q ss_pred HHHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHCCCCCCCCHHHHHHHHHHHH
Q ss_conf 75228302688862142780299983455303377556024677510126416761522302333023036899987258
Q gi|254780846|r 99 TANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178 (324)
Q Consensus 99 ~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~~~~~~~~ISSt~IR~~l~~Gd 178 (324)
++++||++|++++|. +++.||||+|||||++|+||+++|+++ ++++.+++++.. ++++||||+||++|++||
T Consensus 77 ~~~ls~~~Fi~~ll~---~~~~ivvG~DfrFG~~r~G~~~~L~~~----~~~v~~v~~~~~-~~~~ISSt~IR~~i~~G~ 148 (293)
T 1mrz_A 77 IKDLTPEGFVERYLS---GVSAVVVGRDFRFGKNASGNASFLRKK----GVEVYEIEDVVV-QGKRVSSSLIRNLVQEGR 148 (293)
T ss_dssp HTTCCHHHHHHHHCT---TCCEEEEETTCCBSGGGCBCHHHHHHT----TCEEEEECCCEE-TTEECCHHHHHHHHHTTC
T ss_pred HHHCCHHHHHHHHHH---CCCEEEEECCEECCCCCCCCHHHHHCC----CEEEEEEEEECC-CCEEECCHHHHHHHHCCC
T ss_conf 663798999999962---898999943134167876766567347----707998420314-995875199999887698
Q ss_pred HHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEEEEEEHHC--CCCCCHHHHEEEEEEEECCCCCHHCCCCCCCCCCCCCCE
Q ss_conf 999998500000000012210020110111112110000--222310110002476305656211057899726779714
Q gi|254780846|r 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256 (324)
Q Consensus 179 i~~an~lLGr~y~i~G~Vv~G~~~Gr~lGfPTaNi~~~~--~~~p~~GVY~~~v~~~~~~~~~~v~niG~~PT~~~~~~~ 256 (324)
|+.||+||||||+|+|+|+||+++||+||||||||.+++ ...|+.||||++|.+.|+.+|+||+|||.||||+++...
T Consensus 149 i~~An~lLgr~y~i~G~Vv~G~~~Gr~lgfPTaNi~~~~~~~~~p~~GVYa~~v~i~~~~~~~~v~niG~~PTf~~~~~~ 228 (293)
T 1mrz_A 149 VEEIPAYLGRYFEIEGIVHKDREFGRKLGFPTANIDRGNEKLVDLKRGVYLVRVHLPDGKKKFGVMNVGFRPTVGDARNV 228 (293)
T ss_dssp TTTTHHHHSSCCEEEEEC-----------CCCEECBCCSSCBCCCCSEEEEEEEECGGGCEEEEEEEEEEC------CCE
T ss_pred HHHHHHHCCCCEEEEEEEECCCCCCEEECCCCCCCCCCCHHHEEECCEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCE
T ss_conf 88866335897799999976753230514436567777511053311699999984698211004896127721689726
Q ss_pred EEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 9999940678551898899994600008874689899999999979999999874487
Q gi|254780846|r 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314 (324)
Q Consensus 257 ~iE~hildf~~dlYg~~i~v~f~~~iR~e~kF~s~~~L~~qI~~D~~~a~~~l~~~~~ 314 (324)
.+|+|||||++||||++++|+|++|||||+||+|+|+|++||++|++.||++|+...+
T Consensus 229 ~~E~hildf~~dlYg~~i~v~f~~~iR~e~KF~s~~~L~~qi~~D~~~ar~~l~~~~~ 286 (293)
T 1mrz_A 229 KYEVYILDFEGDLYGQRLKLEVLKFMRDEKKFDSIEELKAAIDQDVKSARNMIDDIIN 286 (293)
T ss_dssp EEEEEETTCCSCCTTCEEEEEEEEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCCCCCEEEEEEHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8999972788662898899994872069888399999999999999999999987550
No 4
>1n08_A Putative riboflavin kinase; phophoryl transferases, flavin cofactors, metal binding; HET: ADP; 1.60A {Schizosaccharomyces pombe} SCOP: b.43.5.1 PDB: 1n05_A* 1n07_A* 1n06_A*
Probab=100.00 E-value=1.8e-42 Score=295.71 Aligned_cols=130 Identities=24% Similarity=0.340 Sum_probs=116.8
Q ss_pred HCCHHHHHHHHCCCCC-CEEEEEEEEEEHHCC----CCCCHHHHEEEEEEEECCCCCHHCCCCCCCCCCCCCCEEEEEEE
Q ss_conf 0000000122100201-101111121100002----22310110002476305656211057899726779714999994
Q gi|254780846|r 188 YRFTIESDVIHGEKIG-RTLGFPTANMQLSPD----ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFI 262 (324)
Q Consensus 188 r~y~i~G~Vv~G~~~G-r~lGfPTaNi~~~~~----~~p~~GVY~~~v~~~~~~~~~~v~niG~~PT~~~~~~~~iE~hi 262 (324)
+||+++|+|+||+++| |+||||||||.++.. ..|+.|||++++.+ ++.+|+||+|||.||||++ ...++|+||
T Consensus 22 yPy~i~G~Vv~G~~rGsR~LGfPTANl~~~~~~~l~~~p~~GVYa~~v~i-~~~~~~~v~niG~rPTf~~-~~~~iEvhi 99 (163)
T 1n08_A 22 YPIRFEGKVVHGFGRGSKELGIPTANISEDAIQELLRYRDSGVYFGYAMV-QKRVFPMVMSVGWNPYYKN-KLRSAEVHL 99 (163)
T ss_dssp CCEEEEEEEECCSSSCGGGGTCCCEEECGGGTTTTTTTSCSEEEEEEEEE-TTEEEEEEEEEEECTTCSS-CCEEEEEEE
T ss_pred CCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC-CCEEECCEEECCCCCCCCC-CCCEEEEEE
T ss_conf 88898989961884268657828936727545522137776468998750-6413421104057864455-664068898
Q ss_pred ECCCC-CCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 06785-5189889999460000887468989999999997999999987448721134
Q gi|254780846|r 263 FDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSERD 319 (324)
Q Consensus 263 ldf~~-dlYg~~i~v~f~~~iR~e~kF~s~~~L~~qI~~D~~~a~~~l~~~~~~~~~d 319 (324)
|||++ |+||+.++|+|++|||+|+||+|+|+|++||++|++.||++|+.......|+
T Consensus 100 ldf~~~DlYg~~i~v~~~~~lR~e~kF~sle~L~~qI~~D~~~Ar~~L~~~~~~~~~~ 157 (163)
T 1n08_A 100 IERQGEDFYEEIMRVIVLGYIRPELNYAGLDKLIEDIHTDIRVALNSMDRPSYSSYKK 157 (163)
T ss_dssp TTCCSCCCTTCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHTSHHHHGGGG
T ss_pred ECCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCC
T ss_conf 3366600179679999820126885759999999999999999999985735676464
No 5
>1nb0_A Hypothetical protein FLJ11149; beta barrel, transferase; HET: ADP; 1.70A {Homo sapiens} SCOP: b.43.5.1 PDB: 1nb9_A* 1p4m_A* 1q9s_A*
Probab=100.00 E-value=7.7e-42 Score=291.58 Aligned_cols=130 Identities=28% Similarity=0.386 Sum_probs=116.7
Q ss_pred CCHHHHHHHHCCCCC-CEEEEEEEEEEHHCC-CCC---CHHHHEEEEEEEECCCCCHHCCCCCCCCCCCCCCEEEEEEEE
Q ss_conf 000000122100201-101111121100002-223---101100024763056562110578997267797149999940
Q gi|254780846|r 189 RFTIESDVIHGEKIG-RTLGFPTANMQLSPD-ILL---KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIF 263 (324)
Q Consensus 189 ~y~i~G~Vv~G~~~G-r~lGfPTaNi~~~~~-~~p---~~GVY~~~v~~~~~~~~~~v~niG~~PT~~~~~~~~iE~hil 263 (324)
||+|+|.|+||+++| |+||||||||.++.. .+| +.|||++++.+.++.+|+||+|||.||||++ ...++|+|+|
T Consensus 4 Py~i~G~Vv~G~~~G~r~LGfPTANl~~~~~~~lP~~~~~GVYa~~v~i~~~~~y~~v~niG~rPTf~~-~~~~~E~h~l 82 (147)
T 1nb0_A 4 PYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVVSIGWNPYYKN-TKKSMETHIM 82 (147)
T ss_dssp SEEEEEECBCCSSSCGGGGTCCCEECCHHHHHTSCTTCCSEEEEEEEEETTCCCEEEEEEEEECSSSSS-SCEEEEEEES
T ss_pred CEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCC-CCCEEEEEEE
T ss_conf 989999997189538765461897875755652443345576799999517865530478757864465-5642799984
Q ss_pred -CCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf -67855189889999460000887468989999999997999999987448721134
Q gi|254780846|r 264 -DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSERD 319 (324)
Q Consensus 264 -df~~dlYg~~i~v~f~~~iR~e~kF~s~~~L~~qI~~D~~~a~~~l~~~~~~~~~d 319 (324)
||++||||++++|+|++|||+|+||+|+|+|++||++|++.||++|+.......++
T Consensus 83 ~df~~dlYG~~i~v~~~~~lR~e~kF~s~e~L~~qI~~D~~~ar~~l~~~~~~~~k~ 139 (147)
T 1nb0_A 83 HTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIEEAKKRLELPEYLKIKE 139 (147)
T ss_dssp SCCSSCCTTSEEEEEEEEEEECCCCCSSHHHHHHHHHHHHHHHHHHTTSHHHHGGGG
T ss_pred CCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCC
T ss_conf 577864479859999800556885759999999999999999999987811666464
No 6
>3bnw_A Riboflavin kinase, putative; APO structure, structural genomics, structural genomics of pathogenic protozoa consortium, SGPP, transferase; 2.40A {Trypanosoma brucei}
Probab=100.00 E-value=8.2e-41 Score=284.86 Aligned_cols=132 Identities=24% Similarity=0.344 Sum_probs=112.6
Q ss_pred HHH--HCCHHHHHHHHCCCC-CCEEEEEEEEEEHHCCCCC-----CHHHHEEEEEE--------EECCCCCHHCCCCCCC
Q ss_conf 500--000000012210020-1101111121100002223-----10110002476--------3056562110578997
Q gi|254780846|r 185 LLG--YRFTIESDVIHGEKI-GRTLGFPTANMQLSPDILL-----KEGVYAIRFRT--------QDQTSYSGVANFGRNP 248 (324)
Q Consensus 185 lLG--r~y~i~G~Vv~G~~~-Gr~lGfPTaNi~~~~~~~p-----~~GVY~~~v~~--------~~~~~~~~v~niG~~P 248 (324)
.+| |||+|+|+|+||++| ||+||||||||.+++.++| +.|||++++.+ .++.+|+||+|||.||
T Consensus 11 ~~g~~RPy~i~G~Vv~G~~R~Gr~LGfPTANl~~~~~~~~~~gv~~~gVy~g~~~v~~~~g~~~~~~~~~~~v~nIG~~P 90 (181)
T 3bnw_A 11 QTGSFQPFFLRGKVVHGKGRGGSQLGFPTANIGLDKDVMECLQPYKNLVVYGWGTVSQVPGKERESFGPYPFAASIGFNM 90 (181)
T ss_dssp CCTTSCCEEEEEEEEC------CCSCCCCCEECCCHHHHHHHGGGTTEEEEEEEEEEEETTEEEEEEEEEEEEEEEECC-
T ss_pred HCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEEEEECCC
T ss_conf 54784898999899828998986445089864675134744579962589999998413464334676154588856488
Q ss_pred CCCCCCCEEEEEEEE-CCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 267797149999940-678551898899994600008874689899999999979999999874487211
Q gi|254780846|r 249 TMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSE 317 (324)
Q Consensus 249 T~~~~~~~~iE~hil-df~~dlYg~~i~v~f~~~iR~e~kF~s~~~L~~qI~~D~~~a~~~l~~~~~~~~ 317 (324)
||++ ...++|+|+| ||++||||+.|+|+|++|||+|+||+|+|+|++||++|++.||++|+......-
T Consensus 91 Tf~~-~~~~vE~h~L~dF~~dlYG~~i~V~f~~~lR~e~kF~s~e~L~~QI~~Di~~Ar~~l~~~~~~~~ 159 (181)
T 3bnw_A 91 QFDE-KTLTVEPYFLHEFGWDFYGAVVKIIVLGEIRSMGSFHSLQALVDTIKSDVQFTRDMLQKPQLQEF 159 (181)
T ss_dssp ------CCEEEEEESSCCSSCCTTCEEEEEEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHTSHHHHGG
T ss_pred CCCC-CCCEEEEEEECCCCCCCCCCEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf 2378-87269999836867666898899993660179847599999999999999999999838013443
No 7
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide kinase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=99.92 E-value=8.6e-27 Score=193.67 Aligned_cols=188 Identities=12% Similarity=0.059 Sum_probs=157.4
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCC---CCCCC
Q ss_conf 884999931565028999999999995027977999837986898478886620000789999885113100---02256
Q gi|254780846|r 18 KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA---LIRYK 94 (324)
Q Consensus 18 ~~~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~Gid~---vi~~~ 94 (324)
+..+|++|+|||+|+||+.|+++|.+.++. -.+++||+|||...+.+......+.+.++|.+++++++.+. +++.+
T Consensus 2 Kkigv~iG~FDpvH~GH~~li~~A~~~~d~-l~vvi~~~~~~~~~~~~~~~~~~~~~~~~R~~~l~~~~~~~~~~~~~~~ 80 (365)
T 1lw7_A 2 KKVGVIFGKFYPVHTGHINMIYEAFSKVDE-LHVIVCSDTVRDLKLFYDSKMKRMPTVQDRLRWMQQIFKYQKNQIFIHH 80 (365)
T ss_dssp CCEEEEEECCSSCCHHHHHHHHHHHTTCSE-EEEEEEECHHHHHHHHHHTTCSSCCCHHHHHHHHHHHTSTTTTTEEEEE
T ss_pred CCEEEEEEECCCCCHHHHHHHHHHHHHCCC-CEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEC
T ss_conf 738999872698788999999999996798-6899985798653346554546689999999999984777675599943
Q ss_pred CHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHCCCCCCCCHHHHHHHH
Q ss_conf 40577522830268886214278029998345530337755602467751012641676152230233302303689998
Q gi|254780846|r 95 FTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174 (324)
Q Consensus 95 F~~~~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~~~~~~~~ISSt~IR~~l 174 (324)
|+...+..+++.|+.........+..+++|.||.||.++.|+.+.++. +|++++++++.. ...+||||+||+.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~fg~e~~~~~~~~~~----~g~~~v~v~~~~--~~~~ISST~IR~~~ 154 (365)
T 1lw7_A 81 LVEDGIPSYPNGWQSWSEAVKTLFHEKHFEPSIVFSSEPQDKAPYEKY----LGLEVSLVDPDR--TFFNVSATKIRTTP 154 (365)
T ss_dssp EECSSSCCTTSCHHHHHHHHHHHHHHTTCCCSEEECSCGGGHHHHHHH----TCCEEECCCSSC--CSSCCCHHHHHHCG
T ss_pred CCHHHCCCCHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCHHHHHHH----CCCEEEEECCCC--CCCCCCCHHHCCCH
T ss_conf 643322258177899999726787599648878998560307999975----599389962566--89986560322184
Q ss_pred HHH---HHHHHHHHHHHCCHHHHHHHHC-----CCCCCEEEEEEEE
Q ss_conf 725---8999998500000000012210-----0201101111121
Q gi|254780846|r 175 TKG---HVLNAAHLLGYRFTIESDVIHG-----EKIGRTLGFPTAN 212 (324)
Q Consensus 175 ~~G---di~~an~lLGr~y~i~G~Vv~G-----~~~Gr~lGfPTaN 212 (324)
.++ .-..++..+.+...|+|..--| +.+..++|+|++.
T Consensus 155 ~~~~~~~~~~~~~~~~krI~i~G~~stGKTTL~~~L~~~~~~~~v~ 200 (365)
T 1lw7_A 155 FQYWKFIPKEARPFFAKTVAILGGESSGKSVLVNKLAAVFNTTSAW 200 (365)
T ss_dssp GGGGGGSCTTTGGGTCEEEEEECCTTSHHHHHHHHHHHHTTCEEEC
T ss_pred HHCCCCCCCHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEE
T ss_conf 5434436750110201289997888777789999999996998101
No 8
>3do8_A Phosphopantetheine adenylyltransferase; protein with unknown function, structural genomics, MCSG, PSI-2, protein structure initiative; 1.60A {Archaeoglobus fulgidus}
Probab=99.55 E-value=6.4e-16 Score=122.98 Aligned_cols=145 Identities=12% Similarity=0.088 Sum_probs=92.1
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHH
Q ss_conf 99931565028999999999995027977999837986898478886620000789999885113100022564057752
Q gi|254780846|r 22 VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETAN 101 (324)
Q Consensus 22 vtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~Gid~vi~~~F~~~~a~ 101 (324)
+.-|+||++|.||+.|+++|.+.+......+++.+++|.. +. ....+.++|.+.+++...+....... .
T Consensus 4 ~lgG~FD~~H~GH~~ll~~A~~~~~~~~i~~~~~~~~~~~---k~---~~~~~~~~R~~~l~~~~~~~~~~~~~-----~ 72 (148)
T 3do8_A 4 ALGGTFEPLHEGHKKLIDVAIKLGGRDITIGVTSDRMARA---RI---RSVLPFAIRAENVKRYVMRKYGFEPE-----I 72 (148)
T ss_dssp EEEECCSSCCHHHHHHHHHHHHHHTTCEEEEEECHHHHHH---HS---CCCSCHHHHHHHHHHHHHHHHSSCCE-----E
T ss_pred EEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHH---CH---HHHHHHHHHHHHHHHHHCCCCCCCCC-----C
T ss_conf 9936738848899999999998489729970278456520---00---00000578999999764424674211-----1
Q ss_pred CCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 28302688862142780299983455303377556024677510126416761522302333023036899987258999
Q gi|254780846|r 102 YSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181 (324)
Q Consensus 102 ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~~~~~~~~ISSt~IR~~l~~Gdi~~ 181 (324)
....+++..+ ..+++..+++|.|++||.++..+...++.+ ..+++..++.+...++..||||.||+.+ ++.
T Consensus 73 ~~~~~~~~~~--~~~~~~~~v~g~d~~~~~~~~~~~~~~~~~---~~~~i~~v~~~~~~~~~~ISST~IR~~~----id~ 143 (148)
T 3do8_A 73 VKITNPYGKT--LDVDFEYLVVSPETYEMALKINQKREELGK---RKITIVKVDWMMAEDGKPISSTRIKRGE----IDR 143 (148)
T ss_dssp EEECSTTTTT--TTSCCSEEEECTTTHHHHHHHHHHHHHHTC---CCCEEEEEECCC-------CCCCCCCSC----CC-
T ss_pred CCCHHHHHHH--HHCCCCEEEECCEEECCHHHHHHHHHHCCC---CCCEEEEEEEEECCCCCEECHHHHHHHH----HHH
T ss_conf 0011034456--535886777766785567888547987188---7632677777877999688699999988----997
Q ss_pred HHHHH
Q ss_conf 99850
Q gi|254780846|r 182 AAHLL 186 (324)
Q Consensus 182 an~lL 186 (324)
+++||
T Consensus 144 ~g~ll 148 (148)
T 3do8_A 144 YGGII 148 (148)
T ss_dssp -----
T ss_pred CCCCC
T ss_conf 28979
No 9
>3glv_A Lipopolysaccharide core biosynthesis protein; structural genomics, PSI, MCSG, protein structure initiative; HET: AMP; 1.99A {Thermoplasma volcanium GSS1}
Probab=99.53 E-value=1.6e-14 Score=113.85 Aligned_cols=134 Identities=19% Similarity=0.253 Sum_probs=81.6
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHH
Q ss_conf 99993156502899999999999502797799983798689847888662000078999988511310002256405775
Q gi|254780846|r 21 VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETA 100 (324)
Q Consensus 21 vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~Gid~vi~~~F~~~~a 100 (324)
|+|.|+||++|+||+++|++|.+.+.. .. +...+.+..-..+..+ ....+++...+...-....+
T Consensus 5 V~~~G~FD~~H~GH~~ll~~Ak~~~~~--~~-v~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~--------- 69 (143)
T 3glv_A 5 VMATGVFDILHLGHIHYLKESKKLGDE--LV-VVVARDSTARNNGKIP---IFDENSRLALISELKVVDRA--------- 69 (143)
T ss_dssp EEEEECCSSCCHHHHHHHHHHHTTSSE--EE-EEECCHHHHHHTTCCC---SSCHHHHHHHHTTBTTCSEE---------
T ss_pred EEEEEEECCCCHHHHHHHHHHHHCCCC--CC-CCCCCCCCCCCCCCCC---HHHHHHHHHHHCCCCCEEEE---------
T ss_conf 999857899989999999999870982--23-2223574000233220---06899999862245540489---------
Q ss_pred HCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHCCCCCCCCHHHHHHHHHHH
Q ss_conf 22830268886214278029998345530337755602467751012641676152230233302303689998725
Q gi|254780846|r 101 NYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177 (324)
Q Consensus 101 ~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~~~~~~~~ISSt~IR~~l~~G 177 (324)
...++.+....+ .++++..+++|.||+||.. .+.+.+++++.++.+++... .++..||||.||+.|.+.
T Consensus 70 ~~~~~~~~~~~~-~~~~~~~~v~G~D~~~~~~------~~~~~~~~~~~~~~~i~~~~-~~~~~iSST~I~~~i~~~ 138 (143)
T 3glv_A 70 ILGHEGDMMKTV-IEVKPDIITLGYDQKFDEA------ELQSKINKLGITVKIVRISK-YDGQLNSSSSVRKKIMEL 138 (143)
T ss_dssp EECCTTCHHHHH-HHHCCSEEEECTTCHHHHH------HHHHHHHHHTCCCEEEECCC-CC----------------
T ss_pred EEECCHHHHHHH-HHHCCCEEEECCCCCCCCH------HHHHHHHHCCCCEEEEEEEC-CCCEEEEHHHHHHHHHHH
T ss_conf 974114677899-9969998997787547633------78999997199189999665-899388579999999996
No 10
>2b7l_A Glycerol-3-phosphate cytidylyltransferase; rossmann fold; 3.00A {Staphylococcus aureus}
Probab=99.41 E-value=1.1e-12 Score=101.84 Aligned_cols=128 Identities=19% Similarity=0.317 Sum_probs=84.2
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHCC-CCCCCCCCCHHH
Q ss_conf 4999931565028999999999995027977999837986898478886620000789999885113-100022564057
Q gi|254780846|r 20 GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLE 98 (324)
Q Consensus 20 ~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~G-id~vi~~~F~~~ 98 (324)
.|++.|.||++|.||+.+|++|.+.+..+ .+.++.| +..-.. +. ..+.+.++|..+++++. +|.++...
T Consensus 3 ~V~~~G~FD~lH~GHi~~l~~Ak~~gd~l-iV~v~~D--~~~~~~-k~--~p~~~~~~R~~~l~~l~~Vd~v~~~~---- 72 (132)
T 2b7l_A 3 RVITYGTYDLLHYGHIELLRRAREMGDYL-IVALSTD--EFNQIK-HK--KSYYDYEQRKMMLESIRYVDLVIPEK---- 72 (132)
T ss_dssp EEEEEECCCSCCHHHHHHHHHHHHTSSEE-EEEEECH--HHHHHT-TC--CCSSCHHHHHHHHHTBTTCCEEEEEC----
T ss_pred EEEEEEEECCCCHHHHHHHHHHHHHCCEE-EEEEECC--HHHHHH-CC--CCCCCHHHHHHHHHCCCCCCEEEEEC----
T ss_conf 99992267889989999999999729999-9998165--565531-48--88560899987740057788999804----
Q ss_pred HHHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHCCCCCCCCHHHHHHHHHHHH
Q ss_conf 75228302688862142780299983455303377556024677510126416761522302333023036899987258
Q gi|254780846|r 99 TANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178 (324)
Q Consensus 99 ~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~~~~~~~~ISSt~IR~~l~~Gd 178 (324)
+++...+++ +.+++..+++|.||. ++.+.++.. .++..++. .+.+|||.||+.|..++
T Consensus 73 -----~~~~~~~~i-~~~~~d~~v~G~d~~------~~~~~~k~~-----~~~i~~~~-----~~~iSST~I~~~i~~~~ 130 (132)
T 2b7l_A 73 -----GWGQKEDDV-EKFDVDVFVMGHDWE------GEFDFLKDK-----CEVIYLKR-----TEGISTTKIKQELYGKD 130 (132)
T ss_dssp -----CGGGHHHHH-HHTTCCEEEECGGGT------TTTGGGTTT-----SEEEECSS-----CC---------------
T ss_pred -----CCCCHHHHH-HHHCCCEEEECCCCC------CHHHHHHCC-----CEEEEECC-----CCCCCHHHHHHHHHCCC
T ss_conf -----522469999-972997999858866------603788749-----89999389-----98886899999985403
Q ss_pred H
Q ss_conf 9
Q gi|254780846|r 179 V 179 (324)
Q Consensus 179 i 179 (324)
.
T Consensus 131 ~ 131 (132)
T 2b7l_A 131 A 131 (132)
T ss_dssp -
T ss_pred C
T ss_conf 7
No 11
>1coz_A Protein (glycerol-3-phosphate cytidylyltransferase); HET: CTP; 2.00A {Bacillus subtilis} SCOP: c.26.1.2 PDB: 1n1d_A*
Probab=99.30 E-value=1.6e-11 Score=94.40 Aligned_cols=125 Identities=20% Similarity=0.302 Sum_probs=80.8
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHCC-CCCCCCCCCHHH
Q ss_conf 4999931565028999999999995027977999837986898478886620000789999885113-100022564057
Q gi|254780846|r 20 GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLE 98 (324)
Q Consensus 20 ~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~G-id~vi~~~F~~~ 98 (324)
.|++.|.||++|.||+.+|++|.+.+... .+.++-| +...- .+.+ .+.+.++|.+.++++. +|.++..+..
T Consensus 3 ~V~~~G~FD~lH~GH~~~l~~Ak~~gd~l-iV~v~~D--~~~~~-~k~~--pi~~~~eR~~~l~~l~~Vd~v~~~~~~-- 74 (129)
T 1coz_A 3 KVITYGTFDLLHWGHIKLLERAKQLGDYL-VVAISTD--EFNLQ-KQKK--AYHSYEHRKLILETIRYVDEVIPEKNW-- 74 (129)
T ss_dssp EEEEEECCCSCCHHHHHHHHHHHTTSSEE-EEEEECH--HHHHH-HTCC--CSSCHHHHHHHHTTBTTCCEEEEECCS--
T ss_pred EEEEEEEECCCCHHHHHHHHHHHHHCCEE-EEEEECC--CHHHC-CCCC--CCCCHHHHHHHHHHCCCCCEEEEECCC--
T ss_conf 99993454879989999999999729989-9997067--10205-8998--878999999998652587889973785--
Q ss_pred HHHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHCCCCCCCCHHHHHHHHHH
Q ss_conf 752283026888621427802999834553033775560246775101264167615223023330230368999872
Q gi|254780846|r 99 TANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176 (324)
Q Consensus 99 ~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~~~~~~~~ISSt~IR~~l~~ 176 (324)
+.+.+ .+ ..+++..+++|+||. +....++. +.++..++.. ..+|||.||+.|+.
T Consensus 75 ------~~~~~-~i-~~~~~d~~v~g~d~~------~~~~~~k~-----~~~v~~~~~~-----~~iSSt~i~~~I~~ 128 (129)
T 1coz_A 75 ------EQKKQ-DI-IDHNIDVFVMGDDWE------GKFDFLKD-----QCEVVYLPRT-----EGISTTKIKEEIAG 128 (129)
T ss_dssp ------TTHHH-HH-HHTTCSEEEEEGGGT------TTTGGGTT-----TSEEEEECCC-----TTCCHHHHHHTC--
T ss_pred ------CCCHH-HH-HHCCCCEEEECCCCC------CHHHHHHC-----CCEEEEECCC-----CCCCHHHHHHHHHC
T ss_conf ------53788-88-523996999878746------65688864-----9889996899-----88758999999973
No 12
>1f9a_A Hypothetical protein MJ0541; alpha/beta, transferase, structural genomics; HET: ATP; 2.00A {Methanocaldococcus jannaschii} SCOP: c.26.1.3
Probab=99.16 E-value=4e-11 Score=91.80 Aligned_cols=134 Identities=10% Similarity=0.161 Sum_probs=73.3
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHH
Q ss_conf 99993156502899999999999502797799983798689847888662000078999988511310002256405775
Q gi|254780846|r 21 VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETA 100 (324)
Q Consensus 21 vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~Gid~vi~~~F~~~~a 100 (324)
++.+|.||++|.||+.++++|.+.+.. +++.+.+.+. ......+.+.++|.++++..--+.-....+.. ..
T Consensus 3 gi~~GsFdP~H~GH~~li~~a~~~~d~---v~v~~~~~~~-----~~~~~~~~~~~~R~~mi~~~~~~~~~~~~~~~-~~ 73 (168)
T 1f9a_A 3 GFIIGRFQPFHKGHLEVIKKIAEEVDE---IIIGIGSAQK-----SHTLENPFTAGERILMITQSLKDYDLTYYPIP-IK 73 (168)
T ss_dssp EEEEECCTTCCHHHHHHHHHHTTTCSE---EEEEECSTTC-----CSSSSCCSCHHHHHHHHHHHHTTSSCEEEEEE-CC
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHCCC---CEEEECCCCC-----CCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEE-CC
T ss_conf 899524598999999999999997897---4898047860-----13678888999999999999876796089840-46
Q ss_pred HCC-CHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHCCCCCCCCHHHHHHHHHHHH
Q ss_conf 228-302688862142780299983455303377556024677510126416761522302333023036899987258
Q gi|254780846|r 101 NYS-AEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178 (324)
Q Consensus 101 ~ls-~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~~~~~~~~ISSt~IR~~l~~Gd 178 (324)
..+ +...+.. +. .+..+.++.||.+. ....+.+..|+++..++.. ....||||.||+++..|+
T Consensus 74 ~~~~~~~~~~~-~~------~~~~~~~~~~~~~~-----~~~~~~~~~~~~v~~~~~~---~~~~ISST~IR~~i~~g~ 137 (168)
T 1f9a_A 74 DIEFNSIWVSY-VE------SLTPPFDIVYSGNP-----LVRVLFEERGYEVKRPEMF---NRKEYSGTEIRRRMLNGE 137 (168)
T ss_dssp CCSCGGGHHHH-HH------HHSCCCSEEECCCH-----HHHHHHHHTTCEEECCCCC---STTTSSHHHHHHHHHHTC
T ss_pred CCCHHHHHHHH-HH------HHCCCEEEEECCCH-----HHHHHHHCCCCEEEEECCC---CCCCCCHHHHHHHHHCCC
T ss_conf 64207789999-98------72586799987709-----9998876489869983244---666766799999998599
No 13
>1ej2_A Nicotinamide mononucleotide adenylyltransferase; dinucleotide binding fold, structural genomics, PSI; HET: NAD; 1.90A {Methanothermobacterthermautotrophicus} SCOP: c.26.1.3 PDB: 1m8g_A* 1hyb_A* 1m8j_A* 1m8f_A* 1m8k_A*
Probab=99.15 E-value=2.3e-12 Score=99.78 Aligned_cols=158 Identities=14% Similarity=0.146 Sum_probs=79.5
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHC----CCCCCCCCCCH
Q ss_conf 99993156502899999999999502797799983798689847888662000078999988511----31000225640
Q gi|254780846|r 21 VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM----GFSALIRYKFT 96 (324)
Q Consensus 21 vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~----Gid~vi~~~F~ 96 (324)
++.+|.||++|+||+++++.+.+.++.. .++++..+.+ +.+ ....+.++|.+++... +++.......
T Consensus 6 gl~~G~FdP~H~GH~~l~~~a~~~~~~v-~v~i~~~~~~-----~~~--~~~~~~~~r~~~i~~~l~~~~~~~~~~~~~- 76 (181)
T 1ej2_A 6 GLLVGRMQPFHRGHLQVIKSILEEVDEL-IICIGSAQLS-----HSI--RDPFTAGERVMMLTKALSENGIPASRYYII- 76 (181)
T ss_dssp EEEEECCTTCCHHHHHHHHHHTTTCSEE-EEEECSTTCC-----SSS--SSCSCHHHHHHHHHHHHHHTTCCGGGEEEE-
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHCCCC-EEEEECCCCC-----CCC--CCCCCHHHHHHHHHHHHHHCCCCEEEEEEC-
T ss_conf 9998646989999999999999977998-8998336667-----775--544309999999998676548863545650-
Q ss_pred HHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHCCCCCCCCHHHHHHHHHH
Q ss_conf 57752283026888621427802999834553033775560246775101264167615223023330230368999872
Q gi|254780846|r 97 LETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176 (324)
Q Consensus 97 ~~~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~~~~~~~~ISSt~IR~~l~~ 176 (324)
.+.++...... .-.++.++.+.++.|+.+ ..+.++-+..|+++..++.. +...||||.||++|.+
T Consensus 77 ------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~---~~~~ISST~IR~~i~~ 141 (181)
T 1ej2_A 77 ------PVQDIECNALW-VGHIKMLTPPFDRVYSGN-----PLVQRLFSEDGYEVTAPPLF---YRDRYSGTEVRRRMLD 141 (181)
T ss_dssp ------ECCCCSCHHHH-HHHHHHHSCCCSEEECCC-----HHHHHHHHHTTCCEECCCCS---STTTSSHHHHHHHHHH
T ss_pred ------CCCCHHHHHHH-HHHHHHHCCCEEEEECCH-----HHHHHHHHHCCCEEEECCCC---CCCCCCHHHHHHHHHC
T ss_conf ------56522467889-999987435326998656-----99999887069847733642---3466776999999985
Q ss_pred HHHHHHHHHHHHCCHHHHHH--HHCCCCCCEE
Q ss_conf 58999998500000000012--2100201101
Q gi|254780846|r 177 GHVLNAAHLLGYRFTIESDV--IHGEKIGRTL 206 (324)
Q Consensus 177 Gdi~~an~lLGr~y~i~G~V--v~G~~~Gr~l 206 (324)
|+ ....|+ |-.+.--+ .+|..|+|.|
T Consensus 142 g~--~~~~lv--P~~v~~yI~~~~g~~R~~~l 169 (181)
T 1ej2_A 142 DG--DWRSLL--PESVVEVIDEINGVERIKHL 169 (181)
T ss_dssp TC--CCGGGS--CHHHHHHHHHTTHHHHHHHH
T ss_pred CC--CHHHHC--CHHHHHHHHHCCCHHHHHHH
T ss_conf 99--847979--99999999987888999998
No 14
>3hl4_A Choline-phosphate cytidylyltransferase A; rossmann fold, phospholipid synthesis, phosphatidylcholine, phosphocholine, CTP, CDP-choline; HET: CDC; 2.20A {Rattus norvegicus}
Probab=99.14 E-value=2.3e-10 Score=86.83 Aligned_cols=149 Identities=17% Similarity=0.118 Sum_probs=97.0
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHC-CCCCCCCCCCHHHH
Q ss_conf 99993156502899999999999502797799983798689847888662000078999988511-31000225640577
Q gi|254780846|r 21 VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM-GFSALIRYKFTLET 99 (324)
Q Consensus 21 vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~-Gid~vi~~~F~~~~ 99 (324)
|.|-|.||.+|.||..+|++|++.+.+..++|-... .+.....+. ..+.+.++|...+.++ .||.++.-. +
T Consensus 79 Vyv~G~FDLfH~GHi~lL~~AK~l~~gd~LIVGV~s---De~i~k~Kg-~pi~~~~eR~~~l~~~r~VD~VI~~~--p-- 150 (236)
T 3hl4_A 79 VYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCS---DELTHNFKG-FTVMNENERYDAVQHCRYVDEVVRNA--P-- 150 (236)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHTSSSSEEEEEEECC---HHHHHHHTC-CCSSCHHHHHHHHHTBTTCSEEESSC--C--
T ss_pred EEEECEECCCCHHHHHHHHHHHHCCCCCEEEEEECC---HHHHHHCCC-CCCCCHHHHHHHHHHCCCCCCCCCCC--C--
T ss_conf 999451588898999999999605998989999777---899985699-99999999999865214553522489--8--
Q ss_pred HHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 52283026888621427802999834553033775560246775101264167615223023330230368999872589
Q gi|254780846|r 100 ANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179 (324)
Q Consensus 100 a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~~~~~~~~ISSt~IR~~l~~Gdi 179 (324)
.-...+|++ .+++..++.|.|+.++.+...-...+++.|+ +..++- . .-||||.|.+-|....-
T Consensus 151 -~~~~~~~l~-----~~~~d~vv~gdd~~~~~~~~~~~~~~k~~g~-----~~~i~r--t---~giSTT~II~RI~~~~d 214 (236)
T 3hl4_A 151 -WTLTPEFLA-----EHRIDFVAHDDIPYSSAGSDDVYKHIKEAGM-----FAPTQR--T---EGISTSDIITRIVRDYD 214 (236)
T ss_dssp -SSCCHHHHH-----HTTCCEEEEESSCCCCSSCSCTTHHHHHTTC-----EEEECC--C---TTCCHHHHHHHHHHHHH
T ss_pred -CCCCHHHHH-----HHCCCEEEECCCCCCCCCCHHHHHHHHHCCE-----EEEECC--C---CCCCHHHHHHHHHHHHH
T ss_conf -556299998-----7299789868964427771559999873899-----999789--9---88239999999998799
Q ss_pred HHHHHHHHHCCHHH
Q ss_conf 99998500000000
Q gi|254780846|r 180 LNAAHLLGYRFTIE 193 (324)
Q Consensus 180 ~~an~lLGr~y~i~ 193 (324)
...++-|.|.|+-.
T Consensus 215 ~y~~rnl~rg~~~k 228 (236)
T 3hl4_A 215 VYARRNLQRGYTAK 228 (236)
T ss_dssp C-------------
T ss_pred HHHHHHHHCCCCHH
T ss_conf 99999986671277
No 15
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens}
Probab=98.97 E-value=3e-09 Score=79.55 Aligned_cols=131 Identities=13% Similarity=0.134 Sum_probs=85.9
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHCC-CCCCCCCCCHHH
Q ss_conf 4999931565028999999999995027977999837986898478886620000789999885113-100022564057
Q gi|254780846|r 20 GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLE 98 (324)
Q Consensus 20 ~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~G-id~vi~~~F~~~ 98 (324)
-|.|-|.||.+|.||..+|++|++....+- |.++-|. . +.+.+. +.+.+.++|.++++++. +|.++... +
T Consensus 9 rV~~~G~FDl~H~GH~~~l~~Ak~~gd~Li-Vgv~sD~--~-i~~~Kg--~Pv~~~~eR~~~v~~~k~VD~Vi~~~--~- 79 (341)
T 3elb_A 9 RVWCDGCYDMVHYGHSNQLRQARAMGDYLI-VGVHTDE--E-IAKHKG--PPVFTQEERYKMVQAIKWVDEVVPAA--P- 79 (341)
T ss_dssp EEEEEECCCSCCHHHHHHHHHHHHTSSEEE-EEECCHH--H-HHHHSS--CCSSCHHHHHHHHHHBTTCCEEEETC--C-
T ss_pred EEEEEEEECCCCHHHHHHHHHHHHCCCEEE-EEECCHH--H-HHHCCC--CCCCCHHHHHHHHHCCCCCCEEEECC--C-
T ss_conf 999931357789899999999997399899-9983569--9-985599--99899999999997356887899668--8-
Q ss_pred HHHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHCCCCCCCCHHHHHHHHHH
Q ss_conf 752283026888621427802999834553033775560246775101264167615223023330230368999872
Q gi|254780846|r 99 TANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176 (324)
Q Consensus 99 ~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~~~~~~~~ISSt~IR~~l~~ 176 (324)
..++.+++ +++++..+|.|.|+..+.+.+.-...++..| ++..++- . +-||||.|.+-+..
T Consensus 80 --~~~~~~~l-----~~~~~d~vv~GdD~~~~~~~~~~~~~~k~~g-----~~~~~~r--t---~giSTT~ii~r~l~ 140 (341)
T 3elb_A 80 --YVTTLETL-----DKYNCDFCVHGNDITLTVDGRDTYEEVKQAG-----RYRECKR--T---QGVSTTDLVGRMLL 140 (341)
T ss_dssp --SSCCHHHH-----HHTTCSEEEECSCCCBCTTSCBTTHHHHHTT-----CEEECCC--C---TTCCHHHHHHHHHC
T ss_pred --CCCHHHHH-----HHHCCCEEEECCCCCCCCCCHHHHHHHHCCC-----EEEEECC--C---CCCCHHHHHHHHHH
T ss_conf --62579999-----9869999998881656777412779998099-----8998147--6---99887999999987
No 16
>3n8h_A Pantothenate synthetase; alpha-beta sandwich, ligase, structural genomics, structural of infectious diseases; HET: MSE AMP GOL; 2.00A {Francisella tularensis subsp}
Probab=98.85 E-value=2.2e-09 Score=80.51 Aligned_cols=169 Identities=18% Similarity=0.218 Sum_probs=110.8
Q ss_pred CEEECCCCCCCCCCCCC--C---CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHH
Q ss_conf 94224885211276101--8---849999315650289999999999950279779998379868984788866200007
Q gi|254780846|r 1 MHVFHNIEINQSLPNHL--K---GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75 (324)
Q Consensus 1 Mki~~~~~~~~~~p~~~--~---~~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~ 75 (324)
|+|+++++....+-... . +.|-|+| ++|.||..|++++++. ...+|+|.-.+|..|-.++....+-.++
T Consensus 4 M~i~~~i~~~~~~~~~~~~~~~IgfVPTMG---aLH~GHlsLI~~A~~~---~d~vvVSIFVNP~QF~~~eD~~~YPr~l 77 (264)
T 3n8h_A 4 MIIADNIKQFHSIRNSLIKQQKIGFVPTMG---ALHNGHISLIKKAKSE---NDVVIVSIFVNPTQFNNPNDYQTYPNQL 77 (264)
T ss_dssp CEEECSHHHHHHHHHTSCTTSCEEEEEECS---SCCHHHHHHHHHHHHH---CSEEEEEECCCGGGCSCHHHHHHSCCCH
T ss_pred EEEEECHHHHHHHHHHHHCCCEEEEECCCC---HHHHHHHHHHHHHHHH---CCEEEEEEECCCCCCCCHHHHHHCCHHH
T ss_conf 099705999999999986499099981861---3769999999999874---9908999951711268756677696657
Q ss_pred HHHHHHHHHCCCCCCCCCCCHHH--------------HHHC-----CCHHH------HHHHHCCCCCEEEEEEC-CCCCC
Q ss_conf 89999885113100022564057--------------7522-----83026------88862142780299983-45530
Q gi|254780846|r 76 SIQEKILEKMGFSALIRYKFTLE--------------TANY-----SAEQF------IQKVLVEWLEVKTVITG-TKFRF 129 (324)
Q Consensus 76 ~~k~~~l~~~Gid~vi~~~F~~~--------------~a~l-----s~e~F------i~~iL~~~l~~k~ivVG-~Df~F 129 (324)
++-+++|++.|+|.++..+-+.- +++. -|..| +.+ |.+..++...+.| .||.
T Consensus 78 e~D~~ll~~~gvd~vf~P~~~eiyp~~~~~~~~~~~~~~~~LeG~~RPgHF~GV~TVV~k-Lf~ii~P~~a~FGeKDyQ- 155 (264)
T 3n8h_A 78 QQDIQILASLDVDVLFNPSEKDIYPDGNLLRIEPKLEIANILEGKSRPGHFSGMLTVVLK-LLQITKPNNLYLGEKDYQ- 155 (264)
T ss_dssp HHHHHHHHHTTCSEEECCCHHHHCTTCSCEEEEECSHHHHSTHHHHSTTHHHHHHHHHHH-HHHHHCCSEEEEETTSHH-
T ss_pred HHHHHHHHHCCCEEEEECCHHHCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH-HHHCCCCCEEEEEHHHHH-
T ss_conf 778999997699099907444324678743784363213324688786088889999999-996359980045103289-
Q ss_pred CCCCCCCHHHHHHHHHCCC--CEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 3377556024677510126--4167615223023330230368999872589999985
Q gi|254780846|r 130 GKDRAGDRGILQKRGEKYG--FHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185 (324)
Q Consensus 130 G~~r~Gd~~~L~~~~~~~g--~~v~~i~~~~~~~~~~ISSt~IR~~l~~Gdi~~an~l 185 (324)
-...++++.+.++ ++++.+|.++..+|-..||.+. +|..-+.+.|..+
T Consensus 156 ------Ql~iIk~~v~dl~~~v~Ii~~pTvRe~dGLAlSSRN~--~Ls~~~r~~A~~i 205 (264)
T 3n8h_A 156 ------QVMLIKQLVKDFFINTKIIVCPTQRQPSGLPLSSRNK--NLTSTDIEIANKI 205 (264)
T ss_dssp ------HHHHHHHHHHHTTCCCEEEEECCCBCTTSCBCCGGGG--GCCHHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHCCCCEEEECCEEECCCCCEEEHHHH--HCCHHHHHHHHHH
T ss_conf ------9999999999748881798515588479972007766--4189899999999
No 17
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens}
Probab=98.85 E-value=1.3e-08 Score=75.53 Aligned_cols=141 Identities=15% Similarity=0.162 Sum_probs=86.9
Q ss_pred CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEE-EEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHCC-CCCCCC
Q ss_conf 1018849999315650289999999999950279779-99837986898478886620000789999885113-100022
Q gi|254780846|r 15 NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT-VLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMG-FSALIR 92 (324)
Q Consensus 15 ~~~~~~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~-viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~G-id~vi~ 92 (324)
...+..+.+=|.||.+|.||..+|++|.+.+....++ .++-|..-...- .+...+++.+||...+.++. +|.+++
T Consensus 195 ~~~~kivyv~G~FDl~H~GHi~~L~~Ak~~gd~~~LIVgv~sD~~v~~~K---g~~~Pi~~~~eR~~~v~~~k~VD~Vvi 271 (341)
T 3elb_A 195 QPGETVIYVAGAFDLFHIGHVDFLEKVHRLAERPYIIAGLHFDQEVNHYK---GKNYPIMNLHERTLSVLACRYVSEVVI 271 (341)
T ss_dssp CTTCEEEEEEECCTTCCHHHHHHHHHHHTTSSSEEEEEEEECHHHHHHHH---CTTCCSSCHHHHHHHHHTBTTCCEEEE
T ss_pred CCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHC---CCCCCCCCHHHHHHHHHHCCCCCEEEE
T ss_conf 98984999933352566259999999997299862699996648899634---999998999999999970378778997
Q ss_pred CCCHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHCCCCCCCCHHHHHH
Q ss_conf 56405775228302688862142780299983455303377556024677510126416761522302333023036899
Q gi|254780846|r 93 YKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172 (324)
Q Consensus 93 ~~F~~~~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~~~~~~~~ISSt~IR~ 172 (324)
.++. -.+++|++ .+++..++.|.|+........+.. +..++.|+ +..++. ...+|||.|.+
T Consensus 272 -~~~~----~~~~~~i~-----~~~~d~vv~G~d~~~~~~~~~d~~---~~~k~~gi-~~~i~~-----~~~iSTt~Ii~ 332 (341)
T 3elb_A 272 -GAPY----AVTAELLS-----HFKVDLVCHGKTEIIPDRDGSDPY---QEPKRRGI-FRQIDS-----GSNLTTDLIVQ 332 (341)
T ss_dssp -EECS----SCCHHHHH-----HTTCSEEEECSSCCCCCTTSCCTT---HHHHHHTC-EEECCC-----SCCCCHHHHHH
T ss_pred -CCCC----CCHHHHHH-----HHCCCEEEECCCCCCCCCCCHHHH---HHHHHCCE-EEEECC-----CCCCCHHHHHH
T ss_conf -8997----46699999-----859979998899887665521588---99971999-999089-----99938899999
Q ss_pred HHHHH
Q ss_conf 98725
Q gi|254780846|r 173 ALTKG 177 (324)
Q Consensus 173 ~l~~G 177 (324)
-|...
T Consensus 333 rI~~n 337 (341)
T 3elb_A 333 RIITN 337 (341)
T ss_dssp HHHC-
T ss_pred HHHHH
T ss_conf 99976
No 18
>2ejc_A Pantoate--beta-alanine ligase; X-RAY diffraction, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Thermotoga maritima}
Probab=98.85 E-value=9.1e-09 Score=76.43 Aligned_cols=172 Identities=16% Similarity=0.165 Sum_probs=110.4
Q ss_pred CEEECCCCCCCCCCCC---CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHH
Q ss_conf 9422488521127610---1884999931565028999999999995027977999837986898478886620000789
Q gi|254780846|r 1 MHVFHNIEINQSLPNH---LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77 (324)
Q Consensus 1 Mki~~~~~~~~~~p~~---~~~~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~ 77 (324)
|+|+++++.....-.. ...++.-+.+...+|-||.+|++++.+. ...+|+|.-.+|..|-.++.-..+-.+++.
T Consensus 1 M~ii~~~~el~~~~~~~~~~g~~Ig~VPTMGaLH~GHlsLI~~A~~~---~d~vvVSIFVNP~QF~~~eD~~~YPr~~e~ 77 (280)
T 2ejc_A 1 MRIIETIEEMKKFSEEMREKKKTIGFVPTMGYLHEGHLSLVRRARAE---NDVVVVSIFVNPTQFGPNEDYERYPRDFER 77 (280)
T ss_dssp CEEECCHHHHHHHHHHHHHTTCCEEEEEECSCCCHHHHHHHHHHHHH---SSEEEEEECCCGGGCCTTSCGGGSCCCHHH
T ss_pred CEEECCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHH---CCCEEEEEECCCCCCCCCCCCCCCCCCHHH
T ss_conf 96674699999999999964996999838730659999999999863---893899993575435676311379988588
Q ss_pred HHHHHHHCCCCCCCCCCCHHHHHHC-------------------CCHHH------HHHHHCCCCCEEEEEEC-CCCCCCC
Q ss_conf 9998851131000225640577522-------------------83026------88862142780299983-4553033
Q gi|254780846|r 78 QEKILEKMGFSALIRYKFTLETANY-------------------SAEQF------IQKVLVEWLEVKTVITG-TKFRFGK 131 (324)
Q Consensus 78 k~~~l~~~Gid~vi~~~F~~~~a~l-------------------s~e~F------i~~iL~~~l~~k~ivVG-~Df~FG~ 131 (324)
-+++|++.|+|.++..+.+ ++..- -|..| +.+ |.+..++...+-| .||.
T Consensus 78 D~~~l~~~gvD~vf~P~~~-eiyp~~~~~~v~~~~l~~~LeG~~RPghF~GV~TVV~k-Lf~iv~P~~a~FGeKD~Q--- 152 (280)
T 2ejc_A 78 DRKLLEKENVDCIFHPSVE-EMYPPDFSTYVEETKLSKHLCGRSRPGHFRGVCTVVTK-LFNIVKPHRAYFGQKDAQ--- 152 (280)
T ss_dssp HHHHHHTTTCSEEECCCHH-HHSCTTCCCCCCCCSGGGTTTGGGSTTHHHHHHHHHHH-HHHHHCCSEEEEEGGGHH---
T ss_pred HHHHHHHCCCCEEECCCCC-CCCCCCCCEEEEECCCCCHHCCCCCCCCHHHHHHHHHH-HHHHHCCCEEEECHHHHH---
T ss_conf 8999997599799778210-25677872598404655011267798403089999999-998618560022301699---
Q ss_pred CCCCCHHHHHHHHHCCC--CEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 77556024677510126--41676152230233302303689998725899999850
Q gi|254780846|r 132 DRAGDRGILQKRGEKYG--FHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186 (324)
Q Consensus 132 ~r~Gd~~~L~~~~~~~g--~~v~~i~~~~~~~~~~ISSt~IR~~l~~Gdi~~an~lL 186 (324)
-...++++.+.++ ++++.+|.++..+|-..||.+. .|..-+.+.|..+-
T Consensus 153 ----Ql~iIk~mv~dl~~~i~Ii~~ptvRe~dGLAlSSRN~--~Ls~~~r~~A~~i~ 203 (280)
T 2ejc_A 153 ----QFRVLRRMVRDLNMDVEMIECPIVREPDGLAMSSRNV--YLSPEERQQALSLY 203 (280)
T ss_dssp ----HHHHHHHHHHHTTCCCEEEEECCCBCTTSCBCCGGGG--GCCHHHHHHTHHHH
T ss_pred ----HHHHHHHHHHHCCCCEEEECCCEEECCCCCCCCHHHH--HCCHHHHHHHHHHH
T ss_conf ----9999999999639980697156188799970216766--47999999999999
No 19
>3ag6_A Pantothenate synthetase; ATP-dependent enzyme, ATP-binding, nucleotide-binding, pantothenate biosynthesis; HET: PAJ PG4; 1.85A {Staphylococcus aureus} PDB: 3ag5_A* 2x3f_A*
Probab=98.85 E-value=4.2e-09 Score=78.60 Aligned_cols=168 Identities=16% Similarity=0.205 Sum_probs=110.4
Q ss_pred CEEECCCCCCCCCCCCC---C---CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCH
Q ss_conf 94224885211276101---8---84999931565028999999999995027977999837986898478886620000
Q gi|254780846|r 1 MHVFHNIEINQSLPNHL---K---GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSP 74 (324)
Q Consensus 1 Mki~~~~~~~~~~p~~~---~---~~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~ 74 (324)
|||++++......-... . +.|-|+|+ +|.||..|++++++. ...+|+|.-.+|..|-.++.-..+-.+
T Consensus 2 ~~ii~t~~el~~~~~~~~~~g~~igfVPTMGa---LH~GHlsLI~~A~~~---~~~vvVSIFVNP~QF~~~eD~~~YPr~ 75 (283)
T 3ag6_A 2 TKLITTVKEMQHIVKAAKRSGTTIGFIPTMGA---LHDGHLTMVRESVST---NDITIVSVFVNPLQFGPNEDFDAYPRQ 75 (283)
T ss_dssp CEEECCHHHHHHHHHHHHHTTCCEEEEEECSS---CCHHHHHHHHHHHTT---SSEEEEEECCCGGGCCTTSSTTTSCCC
T ss_pred CEEECCHHHHHHHHHHHHHCCCEEEEECCCCC---HHHHHHHHHHHHHHH---CCCEEEEEEECHHHCCCCCCCCCCCCC
T ss_conf 77988899999999999972991999858853---749999999999873---897899998770224875431006999
Q ss_pred HHHHHHHHHHCCCCCCCCCCCHHHHHHC-------------------CCHHH------HHHHHCCCCCEEEEEEC-CCCC
Q ss_conf 7899998851131000225640577522-------------------83026------88862142780299983-4553
Q gi|254780846|r 75 PSIQEKILEKMGFSALIRYKFTLETANY-------------------SAEQF------IQKVLVEWLEVKTVITG-TKFR 128 (324)
Q Consensus 75 ~~~k~~~l~~~Gid~vi~~~F~~~~a~l-------------------s~e~F------i~~iL~~~l~~k~ivVG-~Df~ 128 (324)
+++-+++|++.|+|.++..+.+ ++-.- -|..| +.+ |.+..++...+.| .||.
T Consensus 76 le~D~~~l~~~gvd~vF~P~~~-e~yp~~~~~~~~~~~~~~~leG~~RPgHF~GV~TVV~k-Lf~iv~P~~a~FGeKD~Q 153 (283)
T 3ag6_A 76 IDKDLELVSEVGADIVFHPAVE-DMYPGELGIDVKVGPLADVLEGAKRPGHFDGVVTVVNK-LFNIVMPDYAYFGKKDAQ 153 (283)
T ss_dssp HHHHHHHHHHHTCSEEECCCHH-HHSCSSCSEEEEECGGGSSTHHHHSTTHHHHHHHHHHH-HHHHHCCSEEEEEGGGHH
T ss_pred HHHHHHHHHHCCCCEEECCCCC-CCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHH-HHHHCCCCCCCCCCCHHH
T ss_conf 8999999984799899847643-46776542024213322112577787256789999999-997328871110400499
Q ss_pred CCCCCCCCHHHHHHHHHCCC--CEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 03377556024677510126--4167615223023330230368999872589999985
Q gi|254780846|r 129 FGKDRAGDRGILQKRGEKYG--FHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185 (324)
Q Consensus 129 FG~~r~Gd~~~L~~~~~~~g--~~v~~i~~~~~~~~~~ISSt~IR~~l~~Gdi~~an~l 185 (324)
-...++++.+.++ ++++.+|.++..+|-..||.+. +|..-+-+.|..+
T Consensus 154 -------Ql~iIk~mv~dl~~~i~Ii~~pTvRe~dGLAlSSRN~--~Ls~~er~~A~~i 203 (283)
T 3ag6_A 154 -------QLAIVEQMVKDFNHAVEIIGIDIVREADGLAKSSRNV--YLTEQERQEAVHL 203 (283)
T ss_dssp -------HHHHHHHHHHHTTCCCEEEEECCCBCTTSCBCCGGGG--GCCHHHHHHTHHH
T ss_pred -------HHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEEHHHH--HCCHHHHHHHHHH
T ss_conf -------9999999999728995013468897589726635655--3598789999999
No 20
>3mxt_A Pantothenate synthetase; alpha-beta-alpha, structural genomics, center for structural of infectious diseases, csgid, ligase; HET: MSE; 1.85A {Campylobacter jejuni subsp}
Probab=98.83 E-value=7.1e-09 Score=77.15 Aligned_cols=166 Identities=15% Similarity=0.154 Sum_probs=109.4
Q ss_pred CEEECCCCCCCCCCCCC------CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCH
Q ss_conf 94224885211276101------884999931565028999999999995027977999837986898478886620000
Q gi|254780846|r 1 MHVFHNIEINQSLPNHL------KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSP 74 (324)
Q Consensus 1 Mki~~~~~~~~~~p~~~------~~~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~ 74 (324)
|+|+++++.....-... =+.|-|+|+ +|-||..|++++++ ...+|+|.-.+|..|-.++.-..+-.+
T Consensus 4 M~ii~~~~el~~~~~~~r~~~~~IgfVPTMGa---LH~GHlsLI~~A~~----~~~vvVSIFVNP~QF~~~eD~~~YPr~ 76 (285)
T 3mxt_A 4 MQVITSVKEAKQIVKDWKSHQLSIGYVPTMGF---LHDGHLSLVKHAKT----QDKVIVSIFVNPMQFGPNEDFSSYPRD 76 (285)
T ss_dssp CEEECCHHHHHHHHHHHHHTTCCEEEEEECSS---CCHHHHHHHHHHTT----SSEEEEEECCCGGGCCTTSCTTTSCCC
T ss_pred CEEECCHHHHHHHHHHHHHCCCEEEEECCCCC---HHHHHHHHHHHHHH----CCCEEEEEEECCCCCCCCCCCCCCCCC
T ss_conf 48981799999999999975993999848630---65999999999976----598699998361127876523469999
Q ss_pred HHHHHHHHHHCCCCCCCCCCCHHHHHHC------C-------------CHHH------HHHHHCCCCCEEEEEEC-CCCC
Q ss_conf 7899998851131000225640577522------8-------------3026------88862142780299983-4553
Q gi|254780846|r 75 PSIQEKILEKMGFSALIRYKFTLETANY------S-------------AEQF------IQKVLVEWLEVKTVITG-TKFR 128 (324)
Q Consensus 75 ~~~k~~~l~~~Gid~vi~~~F~~~~a~l------s-------------~e~F------i~~iL~~~l~~k~ivVG-~Df~ 128 (324)
.++-+++|++.|+|.++....+ ++..- + |-.| +.+ |.+-.++...+-| .||.
T Consensus 77 ~~~D~~~l~~~gvd~vF~P~~~-emyp~~~~~~i~~~~~~~~LeG~~RPgHF~GV~TVV~k-Lf~iv~P~~a~FGeKD~Q 154 (285)
T 3mxt_A 77 LERDIKMCQDNGVDMVFIPDAT-QMYLKNFSTYVDMNTITDKLCGAKRPGHFRGVCTVLTK-FFNILNPDIVYMGQKDAQ 154 (285)
T ss_dssp HHHHHHHHHHTTCSEEECCCHH-HHSCTTCCCCCCCSSSTTSHHHHHSTTHHHHHHHHHHH-HHHHHCCSEEEEEGGGHH
T ss_pred HHHHHHHHHHCCCCEEECCCHH-HCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHH-HHHHCCCCEEEEECCCHH
T ss_conf 7899999986799899838702-12566772488512467675556587236699999999-998608773256211299
Q ss_pred CCCCCCCCHHHHHHHHHCCC--CEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 03377556024677510126--416761522302333023036899987258999998
Q gi|254780846|r 129 FGKDRAGDRGILQKRGEKYG--FHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184 (324)
Q Consensus 129 FG~~r~Gd~~~L~~~~~~~g--~~v~~i~~~~~~~~~~ISSt~IR~~l~~Gdi~~an~ 184 (324)
-...++++.+.++ ++++.+|.++..+|-..||.+. +|..-+-+.|..
T Consensus 155 -------Ql~iIk~mv~dl~~~i~Ii~~pTvRe~dGLAlSSRN~--~Ls~~er~~A~~ 203 (285)
T 3mxt_A 155 -------QCVVVRHMVDDLNFDLKIQICPIIREEDGLAKSSRNV--YLSKEERKASLA 203 (285)
T ss_dssp -------HHHHHHHHHHHTTCSSEEEEECCCBCTTSCBCCGGGG--GCCHHHHHHHHH
T ss_pred -------HHHHHHHHHHHHCCCCEECCCCCEECCCCCEEEHHHH--HCCHHHHHHHHH
T ss_conf -------9999999999707883112668277479956207766--559999999999
No 21
>1v8f_A Pantoate-beta-alanine ligase; rossmann fold, dimer, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: P6G; 1.90A {Thermus thermophilus} SCOP: c.26.1.4 PDB: 1ufv_A
Probab=98.79 E-value=1.3e-08 Score=75.36 Aligned_cols=167 Identities=18% Similarity=0.235 Sum_probs=108.7
Q ss_pred CEEECCCCCCCC-CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHH
Q ss_conf 942248852112-7610188499993156502899999999999502797799983798689847888662000078999
Q gi|254780846|r 1 MHVFHNIEINQS-LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79 (324)
Q Consensus 1 Mki~~~~~~~~~-~p~~~~~~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~ 79 (324)
|++++++..... ++...=+.|-|+|+ +|-||..|++++.+.+ ..+|+|.--+|..|-.++.-..+-.++++-+
T Consensus 1 M~~i~~i~elr~~l~~~~ig~VPTMGa---LH~GHlsLi~~A~~~~---d~vvVSIFVNP~QF~~~eD~~~YPr~l~~D~ 74 (276)
T 1v8f_A 1 MRTVSTVAELRAALPREGVGFVPTMGY---LHRGHLALVERARREN---PFVVVSVFVNPLQFGPGEDYHRYPRDLERDR 74 (276)
T ss_dssp CEEECSHHHHHHHCCSSCEEEEEECSS---CCHHHHHHHHHHHHHC---SEEEEEECCCGGGCCTTSSTTTSCCCHHHHH
T ss_pred CEEECHHHHHHHHHCCCCEEEECCCCC---HHHHHHHHHHHHHHHC---CCEEEEEEECCCCCCCCHHHHHCCCCCHHHH
T ss_conf 958612999999861798999868651---7599999999999768---9789999777766898424765899827659
Q ss_pred HHHHHCCCCCCCCCCCHHHH---------------HH-----CCCHHH------HHHHHCCCCCEEEEEEC-CCCCCCCC
Q ss_conf 98851131000225640577---------------52-----283026------88862142780299983-45530337
Q gi|254780846|r 80 KILEKMGFSALIRYKFTLET---------------AN-----YSAEQF------IQKVLVEWLEVKTVITG-TKFRFGKD 132 (324)
Q Consensus 80 ~~l~~~Gid~vi~~~F~~~~---------------a~-----ls~e~F------i~~iL~~~l~~k~ivVG-~Df~FG~~ 132 (324)
++|++.|+|.++...-+ ++ ++ .-|..| +.+ |.+..++...+-| .||.
T Consensus 75 ~ll~~~gvD~vF~P~~~-e~Yp~~~~~~~~~~~~l~~~leG~~RPgHF~GV~TVV~k-Lf~ii~P~~a~fGeKD~Q---- 148 (276)
T 1v8f_A 75 ALLQEAGVDLLFAPGVE-EMYPEGFATRVQVEGPLTALWEGAVRPGHFQGVATVVAR-LFLLVQPQRAYFGEKDYQ---- 148 (276)
T ss_dssp HHHHHTTCSEEECCCHH-HHSCTTCCEEEEECSHHHHSTHHHHSTTHHHHHHHHHHH-HHHHHCCSEEEEEGGGHH----
T ss_pred HHHHHCCCCEEECCCCC-CCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH-HHHHCCCCEEEEEEHHHH----
T ss_conf 99985899799878854-556767742698557523344788687378899999999-996238871367301699----
Q ss_pred CCCCHHHHHHHHHCCC--CEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 7556024677510126--416761522302333023036899987258999998
Q gi|254780846|r 133 RAGDRGILQKRGEKYG--FHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184 (324)
Q Consensus 133 r~Gd~~~L~~~~~~~g--~~v~~i~~~~~~~~~~ISSt~IR~~l~~Gdi~~an~ 184 (324)
-...++++.+.++ ++++.+|.++..+|-..||.+. +|..-+-+.|..
T Consensus 149 ---Ql~iIk~mv~dl~~~i~Ii~~ptvRe~dGLAlSSRN~--~Ls~~er~~A~~ 197 (276)
T 1v8f_A 149 ---QLLVVRRMVRDLGFPVEVVGVPTVREEDGLALSSRNV--YLSPETRKKAPV 197 (276)
T ss_dssp ---HHHHHHHHHHHHTCCCEEEEECCCBCTTSCBCCGGGG--GCCHHHHHHTTH
T ss_pred ---HHHHHHHHHHHHCCCEEEEECCCEECCCCCEEEHHHH--HCCHHHHHHHHH
T ss_conf ---9999999999848980799646376158823204444--269999999999
No 22
>3inn_A Pantothenate synthetase; ssgcid, SBRI, UW, decode, NIH, niaid, pantoate beta alanine ligase, ATP-binding, cytoplasm, ligase; HET: ATP; 2.10A {Brucella melitensis}
Probab=98.78 E-value=8.6e-09 Score=76.59 Aligned_cols=165 Identities=18% Similarity=0.200 Sum_probs=107.0
Q ss_pred CEEECCCCCCCCCCCCC---C---CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCH
Q ss_conf 94224885211276101---8---84999931565028999999999995027977999837986898478886620000
Q gi|254780846|r 1 MHVFHNIEINQSLPNHL---K---GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSP 74 (324)
Q Consensus 1 Mki~~~~~~~~~~p~~~---~---~~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~ 74 (324)
|+|++++..-...-... . +.|-|+|+ +|-||..|++++.+. ...+|+|.--+|..|-.++.-..+-.+
T Consensus 22 M~ii~t~~elr~~~~~~r~~g~~IgfVPTMGa---LH~GHlsLI~~A~~~---~d~vvVSIFVNP~QF~~~eD~~~YPr~ 95 (314)
T 3inn_A 22 MQIIHTIEELRQALAPARQQGKKIGFVPTMGY---LHKGHLELVRRARVE---NDVTLVSIFVNPLQFGANEDLGRYPRD 95 (314)
T ss_dssp CEEECSHHHHHHHHHHHHHTTCCEEEEEECSS---CCHHHHHHHHHHHHH---CSEEEEEECCCGGGSCTTSSTTTCCCC
T ss_pred EEEECCHHHHHHHHHHHHHCCCEEEEECCCCC---HHHHHHHHHHHHHHH---CCEEEEEEEECCCCCCCCCHHHHCCCC
T ss_conf 69986899999999999973995999868620---769999999999874---994999997777667887307458998
Q ss_pred HHHHHHHHHHCCCCCCCCCCCHHHHHH-------------------CCCHHH------HHHHHCCCCCEEEEEEC-CCCC
Q ss_conf 789999885113100022564057752-------------------283026------88862142780299983-4553
Q gi|254780846|r 75 PSIQEKILEKMGFSALIRYKFTLETAN-------------------YSAEQF------IQKVLVEWLEVKTVITG-TKFR 128 (324)
Q Consensus 75 ~~~k~~~l~~~Gid~vi~~~F~~~~a~-------------------ls~e~F------i~~iL~~~l~~k~ivVG-~Df~ 128 (324)
++.-+++|++.|+|.++....+ ++-. .-|..| +.+ |.+..++...+-| .||.
T Consensus 96 le~D~~~l~~~gvD~vF~P~~~-emYp~~~~~~v~~~~l~~~LeG~~RPgHF~GV~TVV~k-Lf~iv~Pd~a~FGeKD~Q 173 (314)
T 3inn_A 96 LERDAGLLHDAQVDYLFAPTVS-DMYPRPMQTVVDVPPLGNQIEGEARPGHFAGVATVVSK-LFNIVGPDAAYFGEKDFQ 173 (314)
T ss_dssp HHHHHHHHHHTTCSEEECCCHH-HHCSSCCCCEEECHHHHSSTHHHHSTTHHHHHHHHHHH-HHHHHCCSEEEEETTSHH
T ss_pred HHHHHHHHHHCCCCEEEECCCC-CCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHH-HHHCCCCCEEEEECCHHH
T ss_conf 6785899986697399834533-34777761388347655445677687404479999999-983358876677220499
Q ss_pred CCCCCCCCHHHHHHHHHCCC--CEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 03377556024677510126--4167615223023330230368999872589999
Q gi|254780846|r 129 FGKDRAGDRGILQKRGEKYG--FHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182 (324)
Q Consensus 129 FG~~r~Gd~~~L~~~~~~~g--~~v~~i~~~~~~~~~~ISSt~IR~~l~~Gdi~~a 182 (324)
-...++++.+.++ ++++.+|.++..+|-..||.+.+ |..-+-+.|
T Consensus 174 -------Ql~iIk~mv~dl~~~i~Ii~~pTvRe~dGLAmSSRN~~--Ls~~er~~A 220 (314)
T 3inn_A 174 -------QLVIIRRMVDDMAIPVRIVGVETVREDDGLACSSRNVY--LTPEQRRAA 220 (314)
T ss_dssp -------HHHHHHHHHHHTTCCCEEEEECCCBCTTSCBCCGGGGG--CCHHHHHHT
T ss_pred -------HHHHHHHHHHHCCCCEEEEEEEEEECCCEEEEEHHHHH--CCHHHHHHH
T ss_conf -------99999999985089759997226974874665210221--699999999
No 23
>2h29_A Probable nicotinate-nucleotide adenylyltransferase; NADD, namnat, nmnat; HET: DND; 2.00A {Staphylococcus aureus} PDB: 2h2a_A*
Probab=98.74 E-value=1.1e-07 Score=69.42 Aligned_cols=145 Identities=13% Similarity=0.112 Sum_probs=74.8
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCCE-EEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHC--CCCCCCCCCCHHH
Q ss_conf 99931565028999999999995027977-99983798689847888662000078999988511--3100022564057
Q gi|254780846|r 22 VAIGNFDGIHLGHHLILEQAIKIANNSPI-TVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM--GFSALIRYKFTLE 98 (324)
Q Consensus 22 vtiG~FDGvH~GHq~Li~~~~~~a~~~~~-~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~--Gid~vi~~~F~~~ 98 (324)
+-=|.||.+|+||..+++.+.+....... ++.++.+ |. +....+.+.++|.++++.. ..+.+.+.+..-.
T Consensus 6 lfgGsFdP~h~GH~~i~~~a~~~~~~d~v~~~~s~~~-p~------K~~~~~~s~~~R~~m~~~~~~~~~~~~v~~~e~~ 78 (189)
T 2h29_A 6 LYGGQFNPIHTAHMIVASEVFHELQPDEFYFLPSFMS-PL------KKHHDFIDVQHRLTMIQMIIDELGFGDICDDEIK 78 (189)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHHHCCSEEEEEECSBC-TT------SCCCSSCCCHHHHHHHHHHHHHHTCCEECCHHHH
T ss_pred EECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCC-CC------CCCCCCCCHHHHHHHHHHHHHHCCCCCEECHHHC
T ss_conf 9632768377999999999999809995999970578-75------3433558999999999752221143201002220
Q ss_pred HHHCC-CHHHHHHHHCCCCCEE-EEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHH------------CCCCCC
Q ss_conf 75228-3026888621427802-999834553033775560246775101264167615223------------023330
Q gi|254780846|r 99 TANYS-AEQFIQKVLVEWLEVK-TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELR------------NNKSQI 164 (324)
Q Consensus 99 ~a~ls-~e~Fi~~iL~~~l~~k-~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~~------------~~~~~~ 164 (324)
....+ .-+.++.+..+..+.. .+++|.|--..-.+-.+.+.|.+.+ .+.+++--. ......
T Consensus 79 ~~~~~~t~~tl~~l~~~~p~~~~~~i~G~D~~~~l~~w~~~e~l~~~~-----~~~v~~R~~~~~~~~~~~~~~~~~~~~ 153 (189)
T 2h29_A 79 RGGQSYTYDTIKAFKEQHKDSELYFVIGTDQYNQLEKWYQIEYLKEMV-----TFVVVNRDKNSQNVENAMIAIQIPRVD 153 (189)
T ss_dssp HCSBCCHHHHHHHHHHHSTTEEEEEEEEHHHHTTGGGSTTHHHHHHHC-----EEEEECCSSSCCCCCTTSEEECCCCBC
T ss_pred CCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHC-----CEEEECCCCCCCCCCCCCHHCCCCCCE
T ss_conf 576530147889988768885469871561665653262699999648-----777766887540123421002587664
Q ss_pred CCHHHHHHHHHHHH
Q ss_conf 23036899987258
Q gi|254780846|r 165 VSSSNIRTALTKGH 178 (324)
Q Consensus 165 ISSt~IR~~l~~Gd 178 (324)
||||.||+++.+|+
T Consensus 154 ISST~IR~~i~~g~ 167 (189)
T 2h29_A 154 ISSTMIRQRVSEGK 167 (189)
T ss_dssp CCHHHHHHHHHTTC
T ss_pred ECHHHHHHHHHCCC
T ss_conf 67899999998499
No 24
>3cov_A Pantothenate synthetase; pantothenate biosynthesis, enzymes, ligase, drug design, ATP-binding, cytoplasm, magnesium, metal-binding; 1.50A {Mycobacterium tuberculosis} SCOP: c.26.1.4 PDB: 3cow_A* 3coy_A* 3coz_A* 3imc_A* 3ime_A* 3img_A* 3iob_A* 3ioc_A* 3iod_A* 3ioe_A* 3iub_A* 3iue_A* 3ivc_A* 3ivg_A* 3ivx_A* 2a84_A* 1n2b_A* 1n2e_A* 1n2g_A* 1n2h_A* ...
Probab=98.66 E-value=3.8e-08 Score=72.43 Aligned_cols=168 Identities=15% Similarity=0.184 Sum_probs=106.4
Q ss_pred CEEECCCCCCCCCCCCC---CC---EEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCH
Q ss_conf 94224885211276101---88---4999931565028999999999995027977999837986898478886620000
Q gi|254780846|r 1 MHVFHNIEINQSLPNHL---KG---GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSP 74 (324)
Q Consensus 1 Mki~~~~~~~~~~p~~~---~~---~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~ 74 (324)
|+|+++...-...-... .. .|-|+| ++|-||..|++++.+. ....+|+|.--+|..|-.++.-..+-.+
T Consensus 12 m~i~~~~~e~~~~~~~~r~~g~~ig~VPTMG---aLH~GHlsLI~~A~~~--~~d~vvVSIFVNP~QF~~~eD~~~YPr~ 86 (301)
T 3cov_A 12 LNVYSAPGDVADVSRALRLTGRRVMLVPTMG---ALHEGHLALVRAAKRV--PGSVVVVSIFVNPMQFGAGGDLDAYPRT 86 (301)
T ss_dssp CEEECSHHHHHHHHHHHHHTTCEEEEEEECS---CCCHHHHHHHHHHHTS--TTEEEEEEECCCGGGCCSSSHHHHSCCC
T ss_pred EEEECCHHHHHHHHHHHHHHCCEEEEEECCC---HHHHHHHHHHHHHHHC--CCCEEEEEEECCCCCCCCCHHHCCCCCC
T ss_conf 4998689999999999998299089996872---1759999999998652--7997999996275347871220116988
Q ss_pred HHHHHHHHHHCCCCCCCCCCCHHHHHH---------------C----CCHHH------HHHHHCCCCCEEEEEEC-CCCC
Q ss_conf 789999885113100022564057752---------------2----83026------88862142780299983-4553
Q gi|254780846|r 75 PSIQEKILEKMGFSALIRYKFTLETAN---------------Y----SAEQF------IQKVLVEWLEVKTVITG-TKFR 128 (324)
Q Consensus 75 ~~~k~~~l~~~Gid~vi~~~F~~~~a~---------------l----s~e~F------i~~iL~~~l~~k~ivVG-~Df~ 128 (324)
++.-+++|++.|+|.++..+-+ ++-. | -|..| +.+ |.+..++...+.| .||.
T Consensus 87 le~D~~~l~~~gvD~vF~P~~~-eiyp~~~~~~v~~~~l~~~LeG~~RPgHF~GV~TVV~k-Lf~ii~P~~a~FGeKD~Q 164 (301)
T 3cov_A 87 PDDDLAQLRAEGVEIAFTPTTA-AMYPDGLRTTVQPGPLAAELEGGPRPTHFAGVLTVVLK-LLQIVRPDRVFFGEKDYQ 164 (301)
T ss_dssp HHHHHHHHHHTTCCEEECCCHH-HHCTTCSCSEEECCGGGGSGGGSSCTTHHHHHHHHHHH-HHHHHCCSEEEEETTSHH
T ss_pred HHHHHHHHHHCCCEEEEECCHH-HHCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHH-HHHHCCCCEEEEEHHHHH
T ss_conf 1778999997799399953568-84357861487345324314578798523179999999-997469864455000199
Q ss_pred CCCCCCCCHHHHHHHHHCCC--CEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 03377556024677510126--416761522302333023036899987258999998
Q gi|254780846|r 129 FGKDRAGDRGILQKRGEKYG--FHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184 (324)
Q Consensus 129 FG~~r~Gd~~~L~~~~~~~g--~~v~~i~~~~~~~~~~ISSt~IR~~l~~Gdi~~an~ 184 (324)
-...++++.+.+. ++++.+|.++..+|-..||.+- +|..-+-+.|..
T Consensus 165 -------Ql~iIk~mv~dl~~~i~Ii~~pTvRe~dGLAlSSRN~--~Ls~~er~~A~~ 213 (301)
T 3cov_A 165 -------QLVLIRQLVADFNLDVAVVGVPTVREADGLAMSSRNR--YLDPAQRAAAVA 213 (301)
T ss_dssp -------HHHHHHHHHHHTTCCCEEEEECCCBCTTSCBCCTTGG--GCCHHHHHHTHH
T ss_pred -------HHHHHHHHHHHHCCCCCEEECCCEECCCCCEEEHHHH--HCCHHHHHHHHH
T ss_conf -------9999999999838995068657687689965125777--648577899999
No 25
>1kam_A Deamido-NAD(+), nicotinate-nucleotide adenylyltransferase; rossman fold; 2.10A {Bacillus subtilis} SCOP: c.26.1.3 PDB: 1kaq_A*
Probab=98.63 E-value=5.2e-07 Score=65.01 Aligned_cols=147 Identities=16% Similarity=0.019 Sum_probs=65.8
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHH
Q ss_conf 99993156502899999999999502797799983798689847888662000078999988511310002256405775
Q gi|254780846|r 21 VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETA 100 (324)
Q Consensus 21 vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~Gid~vi~~~F~~~~a 100 (324)
+|--|.||.+|+||+++++.|.+..... .+++...+.|..-... .......+...+.....+.......+.++.
T Consensus 10 aifgGSFdP~H~GH~~ii~~a~~~~~~~-~v~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 83 (194)
T 1kam_A 10 GIFGGTFDPPHNGHLLMANEVLYQAGLD-EIWFMPNQIPPHKQNE-----DYTDSFHRVEMLKLAIQSNPSFKLELVEME 83 (194)
T ss_dssp EEEEECCSSCCHHHHHHHHHHHHHTTCS-EEEEEECCCC--------------CHHHHHHHHHHHHTTCTTEEECCGGGS
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHCCCC-EEEEEECCCCCCCCCC-----HHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
T ss_conf 9956475848799999999999985997-8999963566633342-----057999999987664227764200047876
Q ss_pred HCCCH------HHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCH----------HHCCCCCC
Q ss_conf 22830------268886214278029998345530337755602467751012641676152----------23023330
Q gi|254780846|r 101 NYSAE------QFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDE----------LRNNKSQI 164 (324)
Q Consensus 101 ~ls~e------~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~----------~~~~~~~~ 164 (324)
...+. ..+.... .. .....++|.|..+........+.+-..+. +.+..... ........
T Consensus 84 ~~~~~~t~~~l~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (194)
T 1kam_A 84 REGPSYTFDTVSLLKQRY-PN-DQLFFIIGADMIEYLPKWYKLDELLNLIQ---FIGVKRPGFHVETPYPLLFADVPEFE 158 (194)
T ss_dssp TTCCCSHHHHHHHHHHHS-TT-SEEEEEEETTTTTTCCCCHHHHHHHHHSE---EEEEECSSCCCCCSSCCEEEECCCBC
T ss_pred CCCCEEEHHHHHHHHHHC-CC-CCCEEHHHHHHHHHHHHHHHHHHHHHHHH---HHHHCCCCCCCCCCCCEEECCCCCCC
T ss_conf 468636455677899864-88-64000011667888762404999999715---77543754330001010014565565
Q ss_pred CCHHHHHHHHHHHH
Q ss_conf 23036899987258
Q gi|254780846|r 165 VSSSNIRTALTKGH 178 (324)
Q Consensus 165 ISSt~IR~~l~~Gd 178 (324)
||||.||++|..|.
T Consensus 159 ISST~IR~~i~~~~ 172 (194)
T 1kam_A 159 VSSTMIRERFKSKK 172 (194)
T ss_dssp CCHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHCCC
T ss_conf 66799999998399
No 26
>1iho_A Pantoate--beta-alanine ligase; rossman fold, dimer, APO, high, KSMKS, flexible domains, multidomain; 1.70A {Escherichia coli} SCOP: c.26.1.4 PDB: 3mue_A
Probab=98.62 E-value=2.4e-08 Score=73.73 Aligned_cols=168 Identities=18% Similarity=0.193 Sum_probs=107.5
Q ss_pred CEEECCCCCCCCCCCCC------CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCH
Q ss_conf 94224885211276101------884999931565028999999999995027977999837986898478886620000
Q gi|254780846|r 1 MHVFHNIEINQSLPNHL------KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSP 74 (324)
Q Consensus 1 Mki~~~~~~~~~~p~~~------~~~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~ 74 (324)
|+|+++++.-...-... =+.|-|+|+ +|.||..|++++.+. ...+|+|.-.+|..|-.++.-..+-.+
T Consensus 1 M~ii~~~~~l~~~~~~~~~~g~~IgfVPTMGa---LH~GHlsLi~~A~~~---~~~vvvSIFVNP~QF~~~eD~~~YPr~ 74 (283)
T 1iho_A 1 MLIIETLPLLRQQIRRLRMEGKRVALVPTMGN---LHDGHMKLVDEAKAR---ADVVVVSIFVNPMQFDRPEDLARYPRT 74 (283)
T ss_dssp CEEECSHHHHHHHHHHHHHTTCCEEEEEECSC---CCHHHHHHHHHHHHH---CSEEEEEECCCGGGCSSHHHHHHSCCC
T ss_pred CEEECCHHHHHHHHHHHHHCCCEEEEECCCCH---HHHHHHHHHHHHHHH---CCCEEEEEECCCCCCCCHHHHHHCCCC
T ss_conf 96882499999999999974993999848630---769999999999974---893899995375347871443228998
Q ss_pred HHHHHHHHHHCCCCCCCCCCCHHHHHH---------------------CCCHHH------HHHHHCCCCCEEEEEEC-CC
Q ss_conf 789999885113100022564057752---------------------283026------88862142780299983-45
Q gi|254780846|r 75 PSIQEKILEKMGFSALIRYKFTLETAN---------------------YSAEQF------IQKVLVEWLEVKTVITG-TK 126 (324)
Q Consensus 75 ~~~k~~~l~~~Gid~vi~~~F~~~~a~---------------------ls~e~F------i~~iL~~~l~~k~ivVG-~D 126 (324)
.++-+++|++.|+|.++..+.+ ++.- .-|..| +.+ |.+..++...+-| .|
T Consensus 75 ~e~D~~ll~~~gvD~vF~P~~~-eiyp~~~~~~~~i~~~~l~~~LeG~~RPgHF~GV~TVV~k-Lf~iv~P~~a~FGeKD 152 (283)
T 1iho_A 75 LQEDCEKLNKRKVDLVFAPSVK-EIYPNGTETHTYVDVPGLSTMLEGASRPGHFRGVSTIVSK-LFNLVQPDIACFGEKD 152 (283)
T ss_dssp HHHHHHHHHHTTCSEEECCCHH-HHCTTCSTTSCEEECTTGGGSTHHHHSTTHHHHHHHHHHH-HHHHHCCSEEEEETTS
T ss_pred HHHHHHHHHHCCCCEEEECCCC-CCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH-HHHHCCCCEEEEECCH
T ss_conf 6888899986398389848820-2478655631476234435424678677407789999999-9964588745770306
Q ss_pred CCCCCCCCCCHHHHHHHHHCCC--CEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 5303377556024677510126--4167615223023330230368999872589999985
Q gi|254780846|r 127 FRFGKDRAGDRGILQKRGEKYG--FHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185 (324)
Q Consensus 127 f~FG~~r~Gd~~~L~~~~~~~g--~~v~~i~~~~~~~~~~ISSt~IR~~l~~Gdi~~an~l 185 (324)
|. -...++++.+.++ ++++.+|.++..+|-..||.+- +|..-+-+.|..+
T Consensus 153 ~Q-------Ql~iIk~~v~dl~~~i~Ii~~ptvRe~dGLAlSSRN~--~Ls~~er~~A~~i 204 (283)
T 1iho_A 153 FQ-------QLALIRKMVADMGFDIEIVGVPIMRAKDGLALSSRNG--YLTAEQRKIAPGL 204 (283)
T ss_dssp HH-------HHHHHHHHHHHHTCCCEEEEECCCBCTTSCBCCGGGG--GSCHHHHHHTTHH
T ss_pred HH-------HHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEHHHH--HCCHHHHHHHHHH
T ss_conf 99-------9999999999847896148851377688731353766--5388789999999
No 27
>3h05_A Uncharacterized protein VPA0413; nucleotidylyl, transferase, MCSG, midwest center for structural genomics, PSI; 1.65A {Vibrio parahaemolyticus}
Probab=98.56 E-value=4e-07 Score=65.74 Aligned_cols=136 Identities=18% Similarity=0.250 Sum_probs=74.4
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEE-ECCCHHHHHCCCCCCCCCCHHHHHHHHHHHC----CCCCCCCCCC
Q ss_conf 9999315650289999999999950279779998-3798689847888662000078999988511----3100022564
Q gi|254780846|r 21 VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS-FNPHPRTIIQSSSPIFTLSPPSIQEKILEKM----GFSALIRYKF 95 (324)
Q Consensus 21 vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viT-F~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~----Gid~vi~~~F 95 (324)
++--|.||-+|.||..+++++ .+..-+++. -.++|. +. .+.+.++|.++++.. +...+-+.++
T Consensus 5 ~ifgGsFdP~h~GHl~i~~~~----~~~d~viv~p~~~~~~------k~--~~~~~~~R~~m~~~a~~~~~~~~v~v~~~ 72 (177)
T 3h05_A 5 AIFGSAFNPPSLGHKSVIESL----SHFDLVLLEPSIAHAW------GK--NMLDYPIRCKLVDAFIKDMGLSNVQRSDL 72 (177)
T ss_dssp EEEEECCSSCCHHHHHHHTTC----TTSSEEEEEECC---------------CCCHHHHHHHHHHHHHHHCCTTEEECCH
T ss_pred EEECCCCCHHHHHHHHHHHHH----HHCCEEEEEEECCCCC------CC--CCCCHHHHHHHHHHHHHHHHCCCCEEEEH
T ss_conf 996654554129999999999----7269699982025765------67--87899999999999998731268267544
Q ss_pred HHHHHHCC----CHHHHHHHHCCCCCEE-EEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHCCCCCCCCHHHH
Q ss_conf 05775228----3026888621427802-999834553033775560246775101264167615223023330230368
Q gi|254780846|r 96 TLETANYS----AEQFIQKVLVEWLEVK-TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170 (324)
Q Consensus 96 ~~~~a~ls----~e~Fi~~iL~~~l~~k-~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~~~~~~~~ISSt~I 170 (324)
+.....-+ ..+.++.+-....+.. .+++|.|.-....+--+.+.|.+. +.+.+++. ...||||.|
T Consensus 73 e~~~~~~~~s~~t~~~l~~l~~~~~~~~~~~iiG~D~~~~~~~W~~~~~i~~~-----~~~~~~pr-----~~~ISST~I 142 (177)
T 3h05_A 73 EQALYQPGQSVTTYALLEKIQEIYPTADITFVIGPDNFFKFAKFYKAEEITER-----WTVMACPE-----KVKIRSTDI 142 (177)
T ss_dssp HHHHC----CCCHHHHHHHHHHHSTTSEEEEEECHHHHHTGGGSTTHHHHHHH-----SEEEECCC-----SSCCCHHHH
T ss_pred HHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHCHHHHHHH-----CCEEEECC-----CCCCCHHHH
T ss_conf 43226553312378999988741885031776324067674764278999850-----86798458-----778499999
Q ss_pred HHHHHHHH
Q ss_conf 99987258
Q gi|254780846|r 171 RTALTKGH 178 (324)
Q Consensus 171 R~~l~~Gd 178 (324)
|+.+..|.
T Consensus 143 R~~l~~g~ 150 (177)
T 3h05_A 143 RNALIEGK 150 (177)
T ss_dssp HHHHHHTC
T ss_pred HHHHHCCC
T ss_conf 99998599
No 28
>3gmi_A UPF0348 protein MJ0951; protein with unknown function, structural genomics, PSI, MCSG, protein structure initiative; 1.91A {Methanocaldococcus jannaschii DSM2661}
Probab=98.56 E-value=1.9e-07 Score=67.86 Aligned_cols=99 Identities=14% Similarity=0.162 Sum_probs=65.2
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHH
Q ss_conf 88499993156502899999999999502797799983798689847888662000078999988511310002256405
Q gi|254780846|r 18 KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTL 97 (324)
Q Consensus 18 ~~~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~Gid~vi~~~F~~ 97 (324)
.+.+.-++.|+-+|.||+.+++++.+ ....++++.-+. .++....+.+.+..+|.++....|.|.|+.+|+.
T Consensus 52 ~ki~~i~~EyNPFHnGHlylie~ak~---~d~iI~VmSgnf----vQ~~RGepai~~k~~Ra~mAl~~GaDlViELP~~- 123 (357)
T 3gmi_A 52 DKIVCDFTEYNPLHKGHKYALEKGKE---HGIFISVLPGPL----ERSGRGIPYFLNRYIRAEMAIRAGADIVVEGPPM- 123 (357)
T ss_dssp CCEEEEECCCTTCCHHHHHHHHHHHT---SSEEEEEECCTT----SBCTTSSBCSSCHHHHHHHHHHHTCSEEEECCCG-
T ss_pred CCEEEEEEECCCCCHHHHHHHHHHHH---CCCEEEEECCCC----CCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCE-
T ss_conf 82899987328986789999999985---599899968986----5556677443999999999998288846436753-
Q ss_pred HHHHCCCHHHHHHH--HCCCCCEEEEEECCC
Q ss_conf 77522830268886--214278029998345
Q gi|254780846|r 98 ETANYSAEQFIQKV--LVEWLEVKTVITGTK 126 (324)
Q Consensus 98 ~~a~ls~e~Fi~~i--L~~~l~~k~ivVG~D 126 (324)
++ +++-+|...- +...+++..++.|..
T Consensus 124 -~~-~~sa~Fa~~aV~ll~~lg~d~l~FG~e 152 (357)
T 3gmi_A 124 -GI-MGSGQYMRCLIKMFYSLGAEIIPRGYI 152 (357)
T ss_dssp -GG-SCHHHHHHHHHHHHHHHTCCEEEEEEC
T ss_pred -EE-ECCHHHHHHHHHHHHHCCCCEEECCCC
T ss_conf -67-442788988988888729752201588
No 29
>1yum_A 'probable nicotinate-nucleotide adenylyltransferase; alpha/beta domain; HET: CIT NCN; 1.70A {Pseudomonas aeruginosa} PDB: 1yul_A* 1yun_A*
Probab=98.43 E-value=3.9e-06 Score=59.34 Aligned_cols=96 Identities=16% Similarity=0.162 Sum_probs=48.6
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCCE-EEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHC--CCCCCCCCCCHHH
Q ss_conf 99931565028999999999995027977-99983798689847888662000078999988511--3100022564057
Q gi|254780846|r 22 VAIGNFDGIHLGHHLILEQAIKIANNSPI-TVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM--GFSALIRYKFTLE 98 (324)
Q Consensus 22 vtiG~FDGvH~GHq~Li~~~~~~a~~~~~-~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~--Gid~vi~~~F~~~ 98 (324)
+==|.||-+|.||..+++.+.+...-... .+.+..| | +++ . ...+.++|..+++.. ....+.+-++ |
T Consensus 27 ifgGSFdP~H~GHl~i~~~a~~~~~~d~V~~~p~~~n-~---~K~---~-~~~~~~~Rl~m~~~a~~~~~~i~vs~~--E 96 (242)
T 1yum_A 27 LFGGTFDPVHIGHMRSAVEMAEQFALDELRLLPNARP-P---HRE---T-PQVSAAQRLAMVERAVAGVERLTVDPR--E 96 (242)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHHHTCSEEEEEECCCC-G---GGS---C-TTCCHHHHHHHHHHHHTTCTTEEECCG--G
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCC-C---CCC---C-CCCCHHHHHHHHHHHHHHCCCEEEECC--C
T ss_conf 9675857150999999999999819998999983979-8---878---7-655889999998777651560585024--3
Q ss_pred HHHCCCHHHHHHH--HCCCC--CE-EEEEECCCC
Q ss_conf 7522830268886--21427--80-299983455
Q gi|254780846|r 99 TANYSAEQFIQKV--LVEWL--EV-KTVITGTKF 127 (324)
Q Consensus 99 ~a~ls~e~Fi~~i--L~~~l--~~-k~ivVG~Df 127 (324)
.....+.-.++.+ +.+++ +. -.+++|.|.
T Consensus 97 ~~~~~~~~t~dtL~~l~~~~~~~~~~~~iiG~D~ 130 (242)
T 1yum_A 97 LQRDKPSYTIDTLESVRAELAADDQLFMLIGWDA 130 (242)
T ss_dssp GGSSSSCCHHHHHHHHHHHSCTTCEEEEEEEHHH
T ss_pred CCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCH
T ss_conf 3478873099999998764146751799746530
No 30
>1nup_A FKSG76; NAD biosynthesis, cytoplasm, mitochondria, pyridine adenylyltransferase, enzyme catalysi; HET: NMN; 1.90A {Homo sapiens} SCOP: c.26.1.3 PDB: 1nuq_A* 1nur_A 1nus_A* 1nut_A* 1nuu_A*
Probab=98.37 E-value=1.9e-06 Score=61.37 Aligned_cols=69 Identities=14% Similarity=0.092 Sum_probs=40.4
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCC-CEEEE--EECCCHHHHHCCCCCCCCCCHHHHHHHHHHHC--CCCCCCCCCC
Q ss_conf 999315650289999999999950279-77999--83798689847888662000078999988511--3100022564
Q gi|254780846|r 22 VAIGNFDGIHLGHHLILEQAIKIANNS-PITVL--SFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM--GFSALIRYKF 95 (324)
Q Consensus 22 vtiG~FDGvH~GHq~Li~~~~~~a~~~-~~~vi--TF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~--Gid~vi~~~F 95 (324)
|.-|.||-+|.||..+++.+.+..+.. ...++ .+.|+. +......+.+.++|+++++.. +.+.+.+.++
T Consensus 10 v~~GSFdP~H~GHl~i~~~a~~~~~~~~~~~~~~~~~~p~~-----~~~~k~~~~~~~~Rl~Ml~la~~~~~~~~v~~~ 83 (252)
T 1nup_A 10 LACGSFNPITNMHLRMFEVARDHLHQTGMYQVIQGIISPVN-----DTYGKKDLAASHHRVAMARLALQTSDWIRVDPW 83 (252)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHHHHHTTSEEEEEEEEEECC-----TTCSSSCCCCHHHHHHHHHHHGGGCSSEEECCH
T ss_pred EEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCC-----CCCCCCCCCCHHHHHHHHHHHHHHCCCEEECHH
T ss_conf 97055787589999999999998674665567777875888-----987678889999999999999860577242216
No 31
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrolase; two individual domains; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=98.32 E-value=3e-06 Score=60.05 Aligned_cols=58 Identities=22% Similarity=0.219 Sum_probs=36.8
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 499993156502899999999999502797799983798689847888662000078999988511
Q gi|254780846|r 20 GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM 85 (324)
Q Consensus 20 ~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~ 85 (324)
-.+-.|.||-+|+||+.|++++.+.+...-.+|-+-++++ ..+. ..+.++|.++++..
T Consensus 9 igl~~GtFdP~H~GHl~li~~a~~~~d~viV~v~s~~~~~-----~~~n---pfs~~eR~~Mi~~a 66 (341)
T 2qjo_A 9 YGIYIGRFQPFHLGHLRTLNLALEKAEQVIIILGSHRVAA-----DTRN---PWRSPERMAMIEAC 66 (341)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHHHHEEEEEEEEEEETCCC-----CSSS---CSCHHHHHHHHHTT
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCC-----CCCC---CCCHHHHHHHHHHH
T ss_conf 8999866487778999999999977998999981686688-----8889---98999999999998
No 32
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=98.25 E-value=3.8e-06 Score=59.42 Aligned_cols=137 Identities=15% Similarity=0.151 Sum_probs=72.0
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHH----CCCC--CCCC
Q ss_conf 849999315650289999999999950279779998379868984788866200007899998851----1310--0022
Q gi|254780846|r 19 GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK----MGFS--ALIR 92 (324)
Q Consensus 19 ~~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~----~Gid--~vi~ 92 (324)
..+|-+|.||-+|.||..+++++.+.+...-.+|-+-+..+ ..+. ..+.++|.+++++ .+.+ .+.+
T Consensus 8 ~~~v~~GrFqP~H~GH~~~i~~a~~~~d~viv~vgs~~~~~-----~~~n---Pft~~eR~~mi~~~l~~~~~~~~~v~~ 79 (352)
T 2qjt_B 8 DISVFIGRFQPFHKGHLHNIIIALQNSKKVIINIGSCFNTP-----NIKN---PFSFEQRKQMIESDLQVAGIDLDTVVI 79 (352)
T ss_dssp EEEEEEECCTTCCHHHHHHHHHHHHSEEEEEEEEEEESCCC-----CSSS---CSCHHHHHHHHHHHHHHTTCCGGGEEE
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCC-----CCCC---CCCHHHHHHHHHHHHHHCCCCCCEEEE
T ss_conf 68999963599877899999999855996999994699888-----8789---989999999999998862787556998
Q ss_pred CCCHH-----HHHHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHCCCCCCCCH
Q ss_conf 56405-----7752283026888621427802999834553033775560246775101264167615223023330230
Q gi|254780846|r 93 YKFTL-----ETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSS 167 (324)
Q Consensus 93 ~~F~~-----~~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~~~~~~~~ISS 167 (324)
.+... +...-..+..+..+ . ........+ |+.+.+..-.|+.+.. ++.+.++. -+.|||
T Consensus 80 ~~~~D~~~~~~~w~~~v~~~~~~~-~-~~~~~~~~~------~~~~d~~s~~l~~~p~---~~~i~~~~-----~~~iSa 143 (352)
T 2qjt_B 80 EPLADYFYQEQKWQDELRKNVYKH-A-KNNNSIAIV------GHIKDSSSYYIRSFPE---WDYIGVDN-----YKNFNA 143 (352)
T ss_dssp EEEECCTTCHHHHHHHHHHHHTTT-S-CSSCCEEEC------CBSSSSHHHHHHHCTT---SEECCBCC-----TTCCCH
T ss_pred ECCCCCCCCHHHHHHHHHHCCHHH-C-CCCCCCEEE------EEEECCCCEEECCCCC---EEEECCCC-----CCCEEC
T ss_conf 077865454078899998602433-1-036773279------9974333302003886---25522655-----363434
Q ss_pred HHHHHHHHHHHH
Q ss_conf 368999872589
Q gi|254780846|r 168 SNIRTALTKGHV 179 (324)
Q Consensus 168 t~IR~~l~~Gdi 179 (324)
|.||+++..|+.
T Consensus 144 T~iR~~~~~g~~ 155 (352)
T 2qjt_B 144 TEFRQKFYNGII 155 (352)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHCCCC
T ss_conf 178999970687
No 33
>2qtr_A Nicotinate (nicotinamide) nucleotide adenylyltransferase; NAD, nucleotidyltransferase, pyridine nucleotide biosynthesis; HET: NXX; 1.70A {Bacillus anthracis} PDB: 3dv2_A 3mla_A* 3hfj_A* 3mlb_A* 3mmx_A* 3e27_A* 2qtn_A* 2qtm_A*
Probab=98.21 E-value=5.2e-06 Score=58.50 Aligned_cols=145 Identities=16% Similarity=0.039 Sum_probs=67.6
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHCC--CCCCCCCCCHHH
Q ss_conf 999931565028999999999995027977999837986898478886620000789999885113--100022564057
Q gi|254780846|r 21 VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMG--FSALIRYKFTLE 98 (324)
Q Consensus 21 vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~G--id~vi~~~F~~~ 98 (324)
++--|.||-+|.||..+++.+.+... ...+++...++|..-. .. .......+...+.... ........+ +
T Consensus 5 ~if~GsFdP~h~GHl~i~~~a~~~~~-~~~V~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 76 (189)
T 2qtr_A 5 GIIGGTFDPPHYGHLLIANEVYHALN-LEEVWFLPNQIPPHKQ--GR---NITSVESRLQMLELATEAEEHFSICLE--E 76 (189)
T ss_dssp EEEEECCSSCCHHHHC-CHHHHHHTT-CSEEEEEECSSCTTCT--TS---CCCCHHHHHHHHHHHHTTCTTEEECCT--G
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHCC-CCEEEEEECCCCCCCC--CC---HHHHHHHHHHHHHHHHCCCCCEEEEHH--H
T ss_conf 99664767174999999999999849-9989999624566332--21---155899999999876504553022002--3
Q ss_pred HHHCCC---HHHHHHHHCCCC-CEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHH------------HCCCC
Q ss_conf 752283---026888621427-80299983455303377556024677510126416761522------------30233
Q gi|254780846|r 99 TANYSA---EQFIQKVLVEWL-EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDEL------------RNNKS 162 (324)
Q Consensus 99 ~a~ls~---e~Fi~~iL~~~l-~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~------------~~~~~ 162 (324)
.....+ -+.+..+..+.. ....+.+|.|......+-.+...+... ....+.+.. .....
T Consensus 77 ~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (189)
T 2qtr_A 77 LSRKGPSYTYDTMLQLTKKYPDVQFHFIIGGDMVEYLPKWYNIEALLDL-----VTFVGVARPGYKLRTPYPITTVEIPE 151 (189)
T ss_dssp GGSCSCCCHHHHHHHHHHHCTTCEEEEEEEHHHHHHGGGSTTHHHHTTT-----CEEEEECCTTCCCCCSSCCEEECCCC
T ss_pred HHCCCCEEEHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHH-----CCCEEECCCCCCCCCCCCEEECCCCC
T ss_conf 3236870217889999987777550322020577788799999999864-----34100037542212332035404666
Q ss_pred CCCCHHHHHHHHHHHH
Q ss_conf 3023036899987258
Q gi|254780846|r 163 QIVSSSNIRTALTKGH 178 (324)
Q Consensus 163 ~~ISSt~IR~~l~~Gd 178 (324)
..||||.||++++.|+
T Consensus 152 ~~ISST~IR~~~~~~~ 167 (189)
T 2qtr_A 152 FAVSSSLLRERYKEKK 167 (189)
T ss_dssp CCCCHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHCCC
T ss_conf 7407999999998399
No 34
>1kqn_A Nmnat, nicotinamide mononucleotide adenylyl transferase; nucleotidyltransferase superfamily; HET: NAD; 2.20A {Homo sapiens} SCOP: c.26.1.3 PDB: 1kqo_A* 1kr2_A* 1kku_A 1gzu_A*
Probab=98.21 E-value=4.3e-06 Score=59.06 Aligned_cols=69 Identities=17% Similarity=0.118 Sum_probs=40.7
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHC-CC--CEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHC--CCCCCCCCCC
Q ss_conf 9993156502899999999999502-79--7799983798689847888662000078999988511--3100022564
Q gi|254780846|r 22 VAIGNFDGIHLGHHLILEQAIKIAN-NS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM--GFSALIRYKF 95 (324)
Q Consensus 22 vtiG~FDGvH~GHq~Li~~~~~~a~-~~--~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~--Gid~vi~~~F 95 (324)
+.-|.||-+|.||..+++.|.+.-. .. ...-+-|-|.... +.++ .+++.++|+.+++.. +.+.+.+-++
T Consensus 12 l~~GSFdP~H~GHl~ia~~a~~~l~~~~~~~l~~~~~~P~~~~---~~K~--~~~s~~~Rl~Ml~lA~~~~~~~~v~~~ 85 (279)
T 1kqn_A 12 LACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDA---YKKK--GLIPAYHRVIMAELATKNSKWVEVDTW 85 (279)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHHHHHTSSEEEEEEEEEECCGG---GCCT--TCCCHHHHHHHHHHHTTTCSSEEECCT
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC---CCCC--CCCCHHHHHHHHHHHHHCCCCEEECHH
T ss_conf 9624537342999999999999973425604157998058998---7688--899999999999999844686797216
No 35
>3k9w_A Phosphopantetheine adenylyltransferase; niaid, ssgcid, seattle structural genomics center for infectious disease, coenzyme A; HET: 4PS ADE PG4; 1.60A {Burkholderia pseudomallei 1710B} PDB: 3ikz_A*
Probab=98.11 E-value=1.4e-05 Score=55.80 Aligned_cols=38 Identities=24% Similarity=0.301 Sum_probs=27.4
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHH
Q ss_conf 49999315650289999999999950279779998379868
Q gi|254780846|r 20 GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60 (324)
Q Consensus 20 ~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~ 60 (324)
-+|-.|.||-+|.||+.+++++.+..+ .+++...+.+.
T Consensus 7 IaifgGsFdP~H~GHl~ii~~a~~~~D---~v~v~~~~~~~ 44 (170)
T 3k9w_A 7 VAVYPGTFDPLTRGHEDLVRRASSIFD---TLVVGVADSRA 44 (170)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHHHHSS---EEEEEEECCGG
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHHCC---CCEEECCCCCC
T ss_conf 999585679888999999999999789---34272455544
No 36
>1od6_A PPAT, phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.5A {Thermus thermophilus} SCOP: c.26.1.3
Probab=98.10 E-value=2.4e-05 Score=54.24 Aligned_cols=136 Identities=15% Similarity=0.105 Sum_probs=59.9
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHH-CCCCCCCCCCCHHHH
Q ss_conf 9999315650289999999999950279779998379868984788866200007899998851-131000225640577
Q gi|254780846|r 21 VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK-MGFSALIRYKFTLET 99 (324)
Q Consensus 21 vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~-~Gid~vi~~~F~~~~ 99 (324)
++-.|.||-+|.||+.|++++.+..... .++.+-.|+. +... ....+++...+.. ........... .+
T Consensus 3 iifgGsFdP~H~GHl~ii~~a~~~~d~v-~i~~~~~~~~-------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~- 71 (160)
T 1od6_A 3 VVYPGSFDPLTNGHLDVIQRASRLFEKV-TVAVLENPSK-------RGQY-LFSAEERLAIIREATAHLANVEAAT-FS- 71 (160)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHSSEE-EEEEECC------------CC-SSCHHHHHHHHHHHTTTCTTEEEEE-EC-
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHCCEE-EEECCCCCCC-------CCCC-CCCHHHHHHHHHHHHHHHCCCCCCC-CC-
T ss_conf 9950257976899999999999879999-9952677775-------5666-5368999999998775302333344-10-
Q ss_pred HHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHCCCCCCCCHHHHHHHHHHH
Q ss_conf 522830268886214278029998345530337755602467751012641676152230233302303689998725
Q gi|254780846|r 100 ANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177 (324)
Q Consensus 100 a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~~~~~~~~ISSt~IR~~l~~G 177 (324)
.. ........ ...........+.............. .... +.....+.. ..+...||||.||+++.+|
T Consensus 72 --~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~i~~~~--~~~~~~ISST~IRe~i~~g 139 (160)
T 1od6_A 72 --GL-LVDFVRRV--GAQAIVKGLRAVSDYEYELQMAHLNR-QLYP--GLETLFILA--ATRYSFVSSTMVKEIARYG 139 (160)
T ss_dssp --SC-HHHHHHHT--TCSEEEEEECTTSCHHHHHHHHHHHH-HHTT--TCEEEEEEC--CGGGTTCCHHHHHHHHHTT
T ss_pred --CC-CCCCCEEC--CCEEEEECCCCHHHHHHHHHHHHHHH-HHCC--CCCEEEEEC--CCCCCCCCHHHHHHHHHCC
T ss_conf --01-23210001--41578862467799987501999999-8578--988898645--8887753679999999849
No 37
>1vlh_A Phosphopantetheine adenylyltransferase; TM0741, structural genomics, JCSG, protein structure initiative, PSI; HET: PNS; 2.20A {Thermotoga maritima} SCOP: c.26.1.3
Probab=98.07 E-value=1.5e-05 Score=55.51 Aligned_cols=136 Identities=21% Similarity=0.179 Sum_probs=62.1
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHH
Q ss_conf 99993156502899999999999502797799983798689847888662000078999988511310002256405775
Q gi|254780846|r 21 VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETA 100 (324)
Q Consensus 21 vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~Gid~vi~~~F~~~~a 100 (324)
++-.|.||-+|.||..+++.+.+.. .-+++.-.++|. .....+..+|.+..+..-.......... .
T Consensus 15 aifgGsFdPiH~GHl~i~~~a~~~~---D~viv~~~~~~~--------~~~~~~~~~r~~~~~~~~~~~~~~~~~~---~ 80 (173)
T 1vlh_A 15 AVYPGSFDPITLGHVDIIKRALSIF---DELVVLVTENPR--------KKCMFTLEERKKLIEEVLSDLDGVKVDV---H 80 (173)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHTTC---SEEEEEEECCTT--------CCCSSCHHHHHHHHHHHTTTCTTEEEEE---E
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHC---CEEEEEECCCCC--------CCCCCCHHHHHHHHHHHHCCCCEEEECC---C
T ss_conf 9962347877799999999999869---999995035556--------7877878899999986310221011001---1
Q ss_pred HCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHCCCCCCCCHHHHHHHHHHHH
Q ss_conf 228302688862142780299983455303377556024677510126416761522302333023036899987258
Q gi|254780846|r 101 NYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178 (324)
Q Consensus 101 ~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~~~~~~~~ISSt~IR~~l~~Gd 178 (324)
.......... ... ..+....+.-.+....++...+... ...+.+.+.+.. ...-..||||.||+.+..|.
T Consensus 81 ~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~i~l~~--~~~~~~ISST~IR~~i~~g~ 150 (173)
T 1vlh_A 81 HGLLVDYLKK----HGI-KVLVRGLRAVTDYEYELQMALANKK-LYSDLETVFLIA--SEKFSFISSSLVKEVALYGG 150 (173)
T ss_dssp CSCHHHHHHH----HTC-CEEEEEECTTSCHHHHHHHHHHHHH-HSTTCEEEEEEC--CGGGTTCCHHHHHHHHHTTC
T ss_pred CCCCHHHHHH----HCH-HHEEEECCCCHHHHHHHHHHHHHHH-HCCCCCEEEECC--CCCCCEECHHHHHHHHHCCC
T ss_conf 1210147764----045-5515513673047888779999998-679996773005--76764045999999998499
No 38
>3f3m_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A biosynthetic pathway, coenzyme A biosynthesis, cytoplasm, nucleotidyltransferase; HET: PPS; 2.40A {Staphylococcus aureus}
Probab=98.06 E-value=2.1e-05 Score=54.63 Aligned_cols=148 Identities=16% Similarity=0.163 Sum_probs=66.2
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHC--CCCCCCCCCCHHHH
Q ss_conf 9993156502899999999999502797799983798689847888662000078999988511--31000225640577
Q gi|254780846|r 22 VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM--GFSALIRYKFTLET 99 (324)
Q Consensus 22 vtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~--Gid~vi~~~F~~~~ 99 (324)
+=-|.||-+|.||..+++++.+.. ..+++.+.|.|.. . . ..+...+....+.. ..+.+.+...+.
T Consensus 7 ifgGsFdPiH~GHl~i~~~a~~~~---d~~~v~~~~~~~~----~-~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~-- 73 (168)
T 3f3m_A 7 VIPGSFDPITYGHLDIIERSTDRF---DEIHVCVLKNSKK----E-G---TFSLEERMDLIEQSVKHLPNVKVHQFSG-- 73 (168)
T ss_dssp EEEECCTTCCHHHHHHHHHHGGGS---SEEEEEECC----------C---CSCHHHHHHHHHHHTTTCTTEEEEECCS--
T ss_pred EECCCCCCCCHHHHHHHHHHHHHC---CCCEECCCCCCCC----C-C---CCCHHHHHHHHHHHHCCCCCEEEEECCC--
T ss_conf 975146887799999999999868---9541533478655----5-5---5789899999998644579769984266--
Q ss_pred HHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHCCCCCCCCHHHHHHHHHHHH-
Q ss_conf 5228302688862142780299983455303377556024677510126416761522302333023036899987258-
Q gi|254780846|r 100 ANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH- 178 (324)
Q Consensus 100 a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~~~~~~~~ISSt~IR~~l~~Gd- 178 (324)
.. .+... ...+.....+...-................. .........+ ......||||.||+.++.|.
T Consensus 74 --~~-~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~--~~~~~~ISST~IRe~i~~g~~ 142 (168)
T 3f3m_A 74 --LL-VDYCE-----QVGAKTIIRGLRAVSDFEYELRLTSMNKKLN-NEIETLYMMS--STNYSFISSSIVKEVAAYRAD 142 (168)
T ss_dssp --CH-HHHHH-----HHTCCEEEEEECTTCCHHHHHHHHHHHHHHC-TTSEEEEEEC--CTTTTTCCHHHHHHHHHTTCC
T ss_pred --CC-CHHHH-----HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHC-CCCCEEECCC--CCCCCCCCHHHHHHHHHCCCC
T ss_conf --54-02255-----5254310013235137888888999988757-6764784046--767760258999999984999
Q ss_pred -----HHHHHHHHHHCCHHH
Q ss_conf -----999998500000000
Q gi|254780846|r 179 -----VLNAAHLLGYRFTIE 193 (324)
Q Consensus 179 -----i~~an~lLGr~y~i~ 193 (324)
-+.+.+.+-..|.++
T Consensus 143 i~~~VP~~V~~yIk~k~~~~ 162 (168)
T 3f3m_A 143 ISEFVPPYVEKALKKKFKLE 162 (168)
T ss_dssp CTTTSCHHHHHHHHHHHC--
T ss_pred HHHHCCHHHHHHHHHHHCCC
T ss_conf 56969999999999985774
No 39
>3nbk_A Phosphopantetheine adenylyltransferase; PPAT, PHP; HET: PNS; 1.58A {Mycobacterium tuberculosis} PDB: 3nba_A* 3lcj_A* 1tfu_A
Probab=98.00 E-value=2.2e-05 Score=54.49 Aligned_cols=28 Identities=39% Similarity=0.574 Sum_probs=23.2
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHC
Q ss_conf 8499993156502899999999999502
Q gi|254780846|r 19 GGVVAIGNFDGIHLGHHLILEQAIKIAN 46 (324)
Q Consensus 19 ~~vvtiG~FDGvH~GHq~Li~~~~~~a~ 46 (324)
..+|--|.||-+|.||..++++|.+..+
T Consensus 22 riai~~GsFdPiH~GHl~i~~~a~~~~D 49 (177)
T 3nbk_A 22 TGAVCPGSFDPVTLGHVDIFERAAAQFD 49 (177)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHHHSS
T ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHCC
T ss_conf 6999686779887899999999998699
No 40
>1qjc_A Phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.64A {Escherichia coli} SCOP: c.26.1.3 PDB: 1h1t_A* 1gn8_A* 1b6t_A* 3l92_A* 3l93_A
Probab=97.74 E-value=0.00034 Score=46.74 Aligned_cols=27 Identities=30% Similarity=0.388 Sum_probs=22.6
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 849999315650289999999999950
Q gi|254780846|r 19 GGVVAIGNFDGIHLGHHLILEQAIKIA 45 (324)
Q Consensus 19 ~~vvtiG~FDGvH~GHq~Li~~~~~~a 45 (324)
.-++-.|+||-+|.||..+++++.+..
T Consensus 2 K~aifgGsFdPiH~GHl~ia~~a~~~~ 28 (158)
T 1qjc_A 2 KRAIYPGTFDPITNGHIDIVTRATQMF 28 (158)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHTTS
T ss_pred CEEEECCCCCCCCHHHHHHHHHHHHHC
T ss_conf 689980077988799999999999977
No 41
>1o6b_A Phosphopantetheine adenylyltransferase; structural genomics; HET: ADP; 2.20A {Bacillus subtilis} SCOP: c.26.1.3
Probab=97.73 E-value=0.00046 Score=45.87 Aligned_cols=26 Identities=31% Similarity=0.525 Sum_probs=22.1
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHC
Q ss_conf 99993156502899999999999502
Q gi|254780846|r 21 VVAIGNFDGIHLGHHLILEQAIKIAN 46 (324)
Q Consensus 21 vvtiG~FDGvH~GHq~Li~~~~~~a~ 46 (324)
++-.|.||-+|.||.+|++++.+...
T Consensus 5 gifgGsFdPiH~GHl~l~~~a~~~~D 30 (169)
T 1o6b_A 5 AVCPGSFDPVTYGHLDIIKRGAHIFE 30 (169)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHSS
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHCC
T ss_conf 99822568577999999999998799
No 42
>3guz_A Pantothenate synthetase; pantothenate biosynthesis, substrate binding, competitive inhibition, rossmann fold; HET: PAF; 1.67A {Escherichia coli}
Probab=97.67 E-value=8.5e-06 Score=57.10 Aligned_cols=90 Identities=12% Similarity=0.102 Sum_probs=62.7
Q ss_pred CEEECCCCCCCCCCCC---CCC---EEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCH
Q ss_conf 9422488521127610---188---4999931565028999999999995027977999837986898478886620000
Q gi|254780846|r 1 MHVFHNIEINQSLPNH---LKG---GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSP 74 (324)
Q Consensus 1 Mki~~~~~~~~~~p~~---~~~---~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~ 74 (324)
|+|+++++.-...-.. ... .|-|+| ++|.||..|+++|.+. ...+|+|.-.+|..|-.++.-..+-.+
T Consensus 1 M~ii~t~~~lr~~~~~~r~~g~~IgfVPTMG---aLH~GHlsLI~~A~~~---~d~vvVSIFVNP~QF~~~eD~~~YPr~ 74 (176)
T 3guz_A 1 MLIIETLPLLRQQIRRLRMEGKRVALVPTMG---NLHDGHMKLVDEAKAR---ADVVAVSIFVNPMQFDRPEDLARYPRT 74 (176)
T ss_dssp CEEECSHHHHHHHHHHHHHTTCCEEEEEECS---CCCGGGHHHHHHHHHT---CSEEEEEECCCGGGCSCHHHHHHSCCC
T ss_pred CEEECCHHHHHHHHHHHHHCCCEEEEECCCC---CHHHHHHHHHHHHHHH---CCEEEEEEECCCHHCCCCCCCCCCCCC
T ss_conf 9667669999999999997499499983873---0659999999999975---993899960370324666666549998
Q ss_pred HHHHHHHHHHCCCCCCCCCCCH
Q ss_conf 7899998851131000225640
Q gi|254780846|r 75 PSIQEKILEKMGFSALIRYKFT 96 (324)
Q Consensus 75 ~~~k~~~l~~~Gid~vi~~~F~ 96 (324)
.++-+++|++.|+|.++..+.+
T Consensus 75 ~~~D~~~l~~~gvd~vf~P~~~ 96 (176)
T 3guz_A 75 LQEDCEKLNKRKVDLVFAPSVK 96 (176)
T ss_dssp HHHHHHHHHHTTCCEEECCCHH
T ss_pred HHHHHHHHHHCCCCEEEECCHH
T ss_conf 0778999997699899968858
No 43
>1k4m_A NAMN adenylyltransferase; nucleotidyltransferase; HET: NAD CIT; 1.90A {Escherichia coli} SCOP: c.26.1.3 PDB: 1k4k_A*
Probab=97.65 E-value=0.0004 Score=46.23 Aligned_cols=35 Identities=20% Similarity=0.256 Sum_probs=24.6
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCC-EEEEEEC
Q ss_conf 9993156502899999999999502797-7999837
Q gi|254780846|r 22 VAIGNFDGIHLGHHLILEQAIKIANNSP-ITVLSFN 56 (324)
Q Consensus 22 vtiG~FDGvH~GHq~Li~~~~~~a~~~~-~~viTF~ 56 (324)
+==|.||-+|.||..+++.+.+..+... ..+.+..
T Consensus 7 i~gGSFNP~h~gHl~~~~~a~~~~~~d~v~~~p~~~ 42 (213)
T 1k4m_A 7 LFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNV 42 (213)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHHHTCSCEEEEECSS
T ss_pred EEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECC
T ss_conf 970560826499999999999980999999999488
No 44
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Probab=97.10 E-value=0.0013 Score=42.84 Aligned_cols=163 Identities=14% Similarity=0.152 Sum_probs=94.8
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHH----HHHHCCCCCCCCCC
Q ss_conf 84999931565028999999999995027977999837986898478886620000789999----88511310002256
Q gi|254780846|r 19 GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK----ILEKMGFSALIRYK 94 (324)
Q Consensus 19 ~~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~----~l~~~Gid~vi~~~ 94 (324)
.++++.=+=.-+|+||..+++++..... ..+++. |. +.+.++... +.+-+.+ +++.+.-+.+++.+
T Consensus 191 ~~vvaFqTRNp~HraHE~l~~~a~~~~~--~~llI~----pl--vG~~k~~d~--~~~~r~~~~~~~~~~~~~~~~~l~~ 260 (573)
T 1m8p_A 191 SRVVAFQTRNPMHRAHRELTVRAARSRQ--ANVLIH----PV--VGLTKPGDI--DHFTRVRAYQALLPRYPNGMAVLGL 260 (573)
T ss_dssp CSEEEECCSSCCCHHHHHHHHHHHHHTT--CEEEEC----CB--CCCCCTTCH--HHHHHHHHHHHHGGGSSTTSEEECB
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHCC--CCEEEC----CC--CCCCCCCCC--CHHHHHHHHHHHHHHCCCCCEEECC
T ss_conf 6046652278887689999999998637--967844----30--014676666--7899999998888508876357424
Q ss_pred CHHHHHHCCC-HHHHHHHHCCCCCEEEEEECCCCC-CCCCCC--------CCHHHHHHHHHCCCCEEEECCHHHC-C---
Q ss_conf 4057752283-026888621427802999834553-033775--------5602467751012641676152230-2---
Q gi|254780846|r 95 FTLETANYSA-EQFIQKVLVEWLEVKTVITGTKFR-FGKDRA--------GDRGILQKRGEKYGFHTVFIDELRN-N--- 160 (324)
Q Consensus 95 F~~~~a~ls~-e~Fi~~iL~~~l~~k~ivVG~Df~-FG~~r~--------Gd~~~L~~~~~~~g~~v~~i~~~~~-~--- 160 (324)
|.-...--.| |..+..++.+.+++.+++||-|+. .|.+.. -.-..+.++.++.|+++...+++.. .
T Consensus 261 ~~~~m~yaGPrEa~lhAiirkN~GcthfiVGRDHAG~g~~~~~~~fY~~~~a~~i~~~~~~~l~I~ii~~~~~~Yc~~c~ 340 (573)
T 1m8p_A 261 LGLAMRMGGPREAIWHAIIRKNHGATHFIVGRDHAGPGSNSKGEDFYGPYDAQHAVEKYKDELGIEVVEFQMVTYLPDTD 340 (573)
T ss_dssp BCCCCCCCHHHHHHHHHHHHHHHTCSEEEECTTTTCCCCCTTCCCSSCTTHHHHHHHHHHHHHCCEEEECCCCCBBTTTT
T ss_pred CCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHCCCCEECCCCCEEECCCC
T ss_conf 56432457835888989998527985577556656778886678788841357899855332088610246506433567
Q ss_pred ------------CCCCCCHHHHHHHHHHHHH-------HHHHHHHHHCCH
Q ss_conf ------------3330230368999872589-------999985000000
Q gi|254780846|r 161 ------------KSQIVSSSNIRTALTKGHV-------LNAAHLLGYRFT 191 (324)
Q Consensus 161 ------------~~~~ISSt~IR~~l~~Gdi-------~~an~lLGr~y~ 191 (324)
.-..+|.|.||++|.+|.. .++.+.|-+.|.
T Consensus 341 ~~~~~~~c~~~~~~~~iSgt~iR~~L~~G~~~P~~f~rpeV~~~L~~~~~ 390 (573)
T 1m8p_A 341 EYRPVDQVPAGVKTLNISGTELRRRLRSGAHIPEWFSYPEVVKILRESNP 390 (573)
T ss_dssp BCCCSSSSCTTSCCBCCCHHHHHHHHHHTCCCCTTTSCHHHHHHHHTTSC
T ss_pred CEEECCCCCCCCCEEEECHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHH
T ss_conf 28766777898754511478999999779999947644778999998622
No 45
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A*
Probab=97.03 E-value=0.0082 Score=37.71 Aligned_cols=162 Identities=14% Similarity=0.174 Sum_probs=93.2
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHH----HHHCCCCCCCCCC
Q ss_conf 849999315650289999999999950279779998379868984788866200007899998----8511310002256
Q gi|254780846|r 19 GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI----LEKMGFSALIRYK 94 (324)
Q Consensus 19 ~~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~----l~~~Gid~vi~~~ 94 (324)
..|++.-.=.-+|+||.++++++...... . +++- |. ..+.++.. .+.+-|.+- ++.+.-+.+++..
T Consensus 189 ~~VvafqTRNplHraHe~li~~a~~~~~~-~-lli~----pl--vG~~k~gD--~~~~~rvr~y~~~~~~yp~~~~~l~~ 258 (511)
T 1g8f_A 189 DRVVAFQTRNPMHRAHRELTVRAAREANA-K-VLIH----PV--VGLTKPGD--IDHHTRVRVYQEIIKRYPNGIAFLSL 258 (511)
T ss_dssp CCEEEEEESSCCCHHHHHHHHHHHHHHTC-E-EEEE----EB--CSBCSTTC--CCHHHHHHHHHHHGGGSCTTSEEECC
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHCCC-C-EEEE----EE--ECCCCCCC--CCHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 62168872688986899999999973367-5-6885----31--21588566--68799999999999737787389813
Q ss_pred C--HHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCC-CCCCCCCC--------HHHHHHHHHCCCCEEEECCHHHC----
Q ss_conf 4--057752283026888621427802999834553-03377556--------02467751012641676152230----
Q gi|254780846|r 95 F--TLETANYSAEQFIQKVLVEWLEVKTVITGTKFR-FGKDRAGD--------RGILQKRGEKYGFHTVFIDELRN---- 159 (324)
Q Consensus 95 F--~~~~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~-FG~~r~Gd--------~~~L~~~~~~~g~~v~~i~~~~~---- 159 (324)
+ +..++ =+-|.....++.+.+++.+++||-|+. .|.+..|. ...+.++.++.|++++..+.+..
T Consensus 259 lp~~mr~a-GPrEallhAiirkN~GcthfiVGRDHAG~g~~~~g~~fY~p~~Aq~~~~~~~~el~I~~v~~~~~~Y~~~~ 337 (511)
T 1g8f_A 259 LPLAMRMS-GDREAVWHAIIRKNYGASHFIVGRDHAGPGKNSKGVDFYGPYDAQELVESYKHELDIEVVPFRMVTYLPDE 337 (511)
T ss_dssp BCCBCCCC-HHHHHHHHHHHHHHTTCSEEECCTTTTCCCBCTTSCBSSCTTHHHHHHHHTHHHHCSEEECCCCEEEEGGG
T ss_pred CCCCCCCC-CCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHCCCCCCCCCEEEEECCC
T ss_conf 67534657-81889998888875599547867877788877656567785677899985531228731224504996178
Q ss_pred -----------C--CCCCCCHHHHHHHHHHHHH-------HHHHHHHHHCCH
Q ss_conf -----------2--3330230368999872589-------999985000000
Q gi|254780846|r 160 -----------N--KSQIVSSSNIRTALTKGHV-------LNAAHLLGYRFT 191 (324)
Q Consensus 160 -----------~--~~~~ISSt~IR~~l~~Gdi-------~~an~lLGr~y~ 191 (324)
. +-..||.|.+|++|.+|.. .++.+.|-+.|-
T Consensus 338 ~~~~~~~~~~~~~~~~~~iSGtelr~~L~~G~~iP~~f~~peVa~~L~~~~P 389 (511)
T 1g8f_A 338 DRYAPIDQIDTTKTRTLNISGTELRRRLRVGGEIPEWFSYPEVVKILRESNP 389 (511)
T ss_dssp TEEEEGGGCSSSCCCCBCCCHHHHHHHHHHTCCCCTTTSCHHHHHHHHHHSC
T ss_pred CCEEECCCCCCCCCCEEEECHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCC
T ss_conf 8378657789986653700799999999776988944188999999998548
No 46
>1v47_A ATP sulfurylase; product binding complex, zinc, riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; HET: ADX; 2.49A {Thermus thermophilus} SCOP: b.122.1.3 c.26.1.5
Probab=96.88 E-value=0.028 Score=34.20 Aligned_cols=148 Identities=12% Similarity=0.196 Sum_probs=84.0
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHH----HHHH-CCCCCCCCC
Q ss_conf 84999931565028999999999995027977999837986898478886620000789999----8851-131000225
Q gi|254780846|r 19 GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK----ILEK-MGFSALIRY 93 (324)
Q Consensus 19 ~~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~----~l~~-~Gid~vi~~ 93 (324)
.+|++.-.=.-+|+||..+++.+.+.+.+ +++.+ - +.+.++.. .+.+-+.+ +++. +.-+.+++.
T Consensus 156 ~~VvaFqTRNp~HraHe~i~r~a~e~~d~---lli~p----l--vG~~k~~d--~~~~~r~~~~~~~~~~~~~~~~~~l~ 224 (349)
T 1v47_A 156 RKVVAFQTRNAPHRAHEYLIRLGLELADG---VLVHP----I--LGAKKPDD--FPTEVIVEAYQALIRDFLPQERVAFF 224 (349)
T ss_dssp CSEEEEEESSCCCHHHHHHHHHHHHHSSE---EEEEE----B--CSCCCTTS--CCHHHHHHHHHHHHHHHSCGGGEEEC
T ss_pred CEEEEEEECCCCCHHHHHHHHHHHHHCCC---EEEEE----C--CCCCCCCC--CCHHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf 66899852798875799999999974797---89960----5--46776565--68799999999998345887639998
Q ss_pred CCHHH-HHHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCC---CCH-HHHHHHHHCCCCEEEECCHHH-C--------
Q ss_conf 64057-752283026888621427802999834553033775---560-246775101264167615223-0--------
Q gi|254780846|r 94 KFTLE-TANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA---GDR-GILQKRGEKYGFHTVFIDELR-N-------- 159 (324)
Q Consensus 94 ~F~~~-~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~---Gd~-~~L~~~~~~~g~~v~~i~~~~-~-------- 159 (324)
++... +..=.-|.....++.+.+++.+++||-|+. |.+.- .++ ..+++ .++.|++++..+++. +
T Consensus 225 ~l~~~~~~aGPrEa~lhAiirkN~GcthfivGrdhA-G~~~~Y~~~~a~~i~~~-~~~l~I~~v~~~~~~yc~~~~~~~~ 302 (349)
T 1v47_A 225 GLATPMRYAGPKEAVFHALVRKNFGATHFLVGRDHA-GVGDFYDPYAAHRIFDR-LPPLGIEIVKVGAVFHCPLCGGIAS 302 (349)
T ss_dssp CBCSCCCCCTHHHHHHHHHHHHHTTCSEEEECTTTT-CSTTCSCTTHHHHGGGG-SCCCSSEEEECCCEEEETTTTEEEE
T ss_pred ECCCCHHCCCCHHHHHHHHHHHHCCCCEEEECCCCC-CCCCCCCCHHHHHHHHH-CCCCCEEEEECCCEEEECCCCCEEE
T ss_conf 447502016847889999999877997064368888-62235791577899864-8456736996573389733484733
Q ss_pred ----CCC-----CCCCHHHHHHHHHHHHH
Q ss_conf ----233-----30230368999872589
Q gi|254780846|r 160 ----NKS-----QIVSSSNIRTALTKGHV 179 (324)
Q Consensus 160 ----~~~-----~~ISSt~IR~~l~~Gdi 179 (324)
..+ ..+|.|.||++|++|..
T Consensus 303 ~~~cp~~~~~~~~~iSgt~iR~~L~~g~~ 331 (349)
T 1v47_A 303 ERTCPEGHREKRTAISMTKVRALLREGKA 331 (349)
T ss_dssp TTTSCGGGGGGCEECCHHHHHHHHHTTCC
T ss_pred CCCCCCCCCCCCEECCHHHHHHHHHCCCC
T ss_conf 25579987645564278999999987488
No 47
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=96.88 E-value=0.0026 Score=40.92 Aligned_cols=161 Identities=17% Similarity=0.188 Sum_probs=93.0
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHH----HHCCC-CCCCCC
Q ss_conf 8499993156502899999999999502797799983798689847888662000078999988----51131-000225
Q gi|254780846|r 19 GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL----EKMGF-SALIRY 93 (324)
Q Consensus 19 ~~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l----~~~Gi-d~vi~~ 93 (324)
..|++.-.=+.+|+||..+++++.+... ..+++. |. +.+.++.. .+.+-+.+.+ +.+-. +.+++.
T Consensus 164 ~~VvaFqTRNp~Hr~He~i~k~ale~~~--~~lli~----pl--vG~~k~gd--~~~~~r~~~y~~~~~~~~~~~~~~l~ 233 (546)
T 2gks_A 164 DKIVAFQTRNPMHRVHEELTKRAMEKVG--GGLLLH----PV--VGLTKPGD--VDVYTRMRIYKVLYEKYYDKKKTILA 233 (546)
T ss_dssp SCEEEECCSSCCCHHHHHHHHHHHHHHT--SEEEEC----CB--CSBCCTTS--CCHHHHHHHHHHHHHHHSCTTTEEEC
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHHC--CCEEEE----CC--CCCCCCCC--CCHHHHHHHHHHHHHHCCCCCCEEEE
T ss_conf 6424666378897699999999998507--877983----05--78787667--88799999999998503887726995
Q ss_pred CC--HHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCC----------CCCHHHHHHHHHCCCCEEEECCHHHC-C
Q ss_conf 64--05775228302688862142780299983455303377----------55602467751012641676152230-2
Q gi|254780846|r 94 KF--TLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR----------AGDRGILQKRGEKYGFHTVFIDELRN-N 160 (324)
Q Consensus 94 ~F--~~~~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r----------~Gd~~~L~~~~~~~g~~v~~i~~~~~-~ 160 (324)
++ +.-+ .=.-|.....++.+.+++.+++||-|+. |-+. ..--..+.++.++.|++++..+++.. .
T Consensus 234 ~l~~~m~y-AGPrEa~~hAiirkN~GcthfiVGRDHA-G~g~~~~~~~fY~~~~a~~i~~~~~~~l~I~~i~~~~~~Yc~ 311 (546)
T 2gks_A 234 FLPLAMRM-AGPREALWHGIIRRNYGATHFIVGRDHA-SPGKDSKGKPFYDPYEAQELFKKYEDEIGIKMVPFEELVYVP 311 (546)
T ss_dssp BBCCBCCC-CTHHHHHHHHHHHHHTTCSEEEECTTTT-CCCBCTTSCBSSCTTHHHHHHHHHHHHHTCEEEECCCCEEET
T ss_pred ECCCCCCC-CCCHHHHHHHHHHHHCCCCEEEECCCCC-CCCCCCCCCCCCCHHHHHHHHHHCHHHCCCCEEECCCEEEEC
T ss_conf 34754344-7847899999998736985564056567-877676676677836778999854222187301025308772
Q ss_pred ----------------CCCCCCHHHHHH-HHHHHHH-------HHHHHHHHHCCH
Q ss_conf ----------------333023036899-9872589-------999985000000
Q gi|254780846|r 161 ----------------KSQIVSSSNIRT-ALTKGHV-------LNAAHLLGYRFT 191 (324)
Q Consensus 161 ----------------~~~~ISSt~IR~-~l~~Gdi-------~~an~lLGr~y~ 191 (324)
.-..+|+|.+|+ +|.+|.. .++.+.|-+.|.
T Consensus 312 ~c~~~v~~~~c~h~~~~~i~~sgt~~r~~lL~~G~~~P~~~~rpeV~~~L~~~~p 366 (546)
T 2gks_A 312 ELDQYVEINEAKKRNLKYINISGTEIRENFLKQGRKLPEWFTRPEVAEILAETYV 366 (546)
T ss_dssp TTTEEECSCC---------------CTHHHHTTTCCCCTTTSCHHHHHHHHHHSC
T ss_pred CCCEEEECCCCCCCCCCEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCH
T ss_conf 0393887677899864356057379999999779999910078899999998552
No 48
>1jhd_A Sulfate adenylyltransferase; sulfurylase, APS, chemoautotroph, bromide; 1.70A {Sulfur-oxidizing endosymbiont ofriftia pachyptila} SCOP: b.122.1.3 c.26.1.5
Probab=96.72 E-value=0.025 Score=34.50 Aligned_cols=163 Identities=13% Similarity=0.171 Sum_probs=86.3
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHH-----CCCCCCCCC
Q ss_conf 849999315650289999999999950279779998379868984788866200007899998851-----131000225
Q gi|254780846|r 19 GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK-----MGFSALIRY 93 (324)
Q Consensus 19 ~~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~-----~Gid~vi~~ 93 (324)
.+|++.=.=.-+|+||..|++.+.+.++...+.+ . |. ..+.++.. .+.+-+.+.++. +.-+.+++.
T Consensus 193 ~~VvaFqTRNp~Hr~He~l~~~al~~~~~~~lli-~----p~--~G~~k~~d--~~~~~r~~~~~~~~~~~~~~~~~~l~ 263 (396)
T 1jhd_A 193 SKVVAFQTRNPMHRAHEELCRMAMESLDADGVVV-H----ML--LGKLKKGD--IPAPVRDAAIRTMAEVYFPPNTVMVT 263 (396)
T ss_dssp SSEEEEEESSCCCHHHHHHHHHHHHHHTCSEEEE-E----EE--ECCCCTTC--CCHHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEE-E----EE--ECCCCCCC--CCHHHHHHHHHHHHHHCCCCCCEEEE
T ss_conf 7677764268897589999999999715783798-5----44--33587877--89899999999998623898755998
Q ss_pred CCHHHH-HHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCC---CH-HHHHHHHHC--CCCEEEECCH-HHC------
Q ss_conf 640577-522830268886214278029998345530337755---60-246775101--2641676152-230------
Q gi|254780846|r 94 KFTLET-ANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG---DR-GILQKRGEK--YGFHTVFIDE-LRN------ 159 (324)
Q Consensus 94 ~F~~~~-a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~G---d~-~~L~~~~~~--~g~~v~~i~~-~~~------ 159 (324)
+|.-.. ..=.-|.....++.+.+++.+++||-|+. |.+.-= +. ..+.++..+ .++++...+. +.+
T Consensus 264 ~l~~~m~yAGPrEa~~hAiir~N~GcthfivGRDHA-G~g~~Y~~~~aq~i~~~~~~e~~l~I~i~~~~~~~Yc~~c~~~ 342 (396)
T 1jhd_A 264 GYGFDMLYAGPREAVLHAYFRQNMGATHFIIGRDHA-GVGDYYGAFDAQTIFDDEVPEGAMEIEIFRADHTAYSKKLNKI 342 (396)
T ss_dssp EEECCCCCCTHHHHHHHHHHHHHTTCSEEEECTTTT-CCTTCSCTTHHHHHHHHTSCTTSCSCEEEECCCEEEETTTTEE
T ss_pred ECCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCC-CCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCEEEECCCCEE
T ss_conf 435653457854888999999866984165357777-6333589166789987126767874389973652998778869
Q ss_pred -------CCC----CCCCHHHHHHHHHHHHH-------HHHHHHHHHCCH
Q ss_conf -------233----30230368999872589-------999985000000
Q gi|254780846|r 160 -------NKS----QIVSSSNIRTALTKGHV-------LNAAHLLGYRFT 191 (324)
Q Consensus 160 -------~~~----~~ISSt~IR~~l~~Gdi-------~~an~lLGr~y~ 191 (324)
.++ ..||.|.+|++|.+|.. .++.+.|-+.|.
T Consensus 343 ~~~~~~p~~~~~~~~~iSGt~~r~~l~~g~~pP~~f~rpeV~~~L~~~y~ 392 (396)
T 1jhd_A 343 VMMRDVPDHTKEDFVLLSGTKVREMLGQGIAPPPEFSRPEVAKILMDYYQ 392 (396)
T ss_dssp EEGGGCTTCCGGGEECCCHHHHHHHHHTTCCCCTTTCCHHHHHHHHHHHH
T ss_pred EECCCCCCCCCCCCEEECHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 97365688873241774589999999883888976653899999999987
No 49
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans}
Probab=96.59 E-value=0.015 Score=36.03 Aligned_cols=164 Identities=12% Similarity=0.095 Sum_probs=91.8
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCC--CCCCCHHHHHHHHHHHCCCCCCCCCCCH
Q ss_conf 84999931565028999999999995027977999837986898478886--6200007899998851131000225640
Q gi|254780846|r 19 GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFT 96 (324)
Q Consensus 19 ~~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~--~~~l~~~~~k~~~l~~~Gid~vi~~~F~ 96 (324)
.+|++.-+=.-+|+||.++++++..... ..+++- |. ....+. .....-......+...+.-+.++..++.
T Consensus 164 ~~VvafqTRNp~HraHe~~~~~~~~~~~--~~lli~----~v--~g~~~~~~~~~~~~~~~~~~~~~y~p~~~v~l~~l~ 235 (552)
T 3cr8_A 164 RRIIAWQARQPMHRAQYEFCLKSAIENE--ANLLLH----PQ--VGGDITEAPAYFGLVRSFLAIRDRFPAATTQLSLLP 235 (552)
T ss_dssp CSEEEECCSSCCCHHHHHHHHHHHHHTT--CEEEEC----CB--CCCCTTTCTTHHHHHHHHHHHGGGSCGGGEEECBBC
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHHHCC--CCEEEE----CC--CCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCC
T ss_conf 6431342268997789999999998548--866760----34--577766664699999999999864676644771247
Q ss_pred HHHHHCCC-HHHHHHHHCCCCCEEEEEECCCCC-CCCC-CCC------CH-HHHHHHHHCCCCEEEECCHHHC-------
Q ss_conf 57752283-026888621427802999834553-0337-755------60-2467751012641676152230-------
Q gi|254780846|r 97 LETANYSA-EQFIQKVLVEWLEVKTVITGTKFR-FGKD-RAG------DR-GILQKRGEKYGFHTVFIDELRN------- 159 (324)
Q Consensus 97 ~~~a~ls~-e~Fi~~iL~~~l~~k~ivVG~Df~-FG~~-r~G------d~-~~L~~~~~~~g~~v~~i~~~~~------- 159 (324)
....-=.| |.++..++.+.+++.+++||-|+. -|.. ..| ++ ..+.++.++.|+++...+.+..
T Consensus 236 ~~~r~aGprEailhAiirkN~GcthfiVGRDHAGvg~~~~~~~~y~~~~a~~~~~~~~~~lgI~~v~~~~~~Yc~~c~~~ 315 (552)
T 3cr8_A 236 APPPEASGRALLLRAIVARNFGCSLLIAGGEHQPDGGDCRRGEDLTQNRVDPSVAERAEKIGVRLIAYPRMVYVEDRAEH 315 (552)
T ss_dssp SCCCCSCSHHHHHHHHHHHHHTCSEEEC----------------------CCSSHHHHHHHTCEEECCCCEEEEGGGTEE
T ss_pred CCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCEEECCCCEE
T ss_conf 76566760777777788874688762279777777767667654574225678773410049667422535897577659
Q ss_pred ------CC---CCCCCHHHHHHHHHHHHH-------HHHHHHHHHCC
Q ss_conf ------23---330230368999872589-------99998500000
Q gi|254780846|r 160 ------NK---SQIVSSSNIRTALTKGHV-------LNAAHLLGYRF 190 (324)
Q Consensus 160 ------~~---~~~ISSt~IR~~l~~Gdi-------~~an~lLGr~y 190 (324)
.. -..+|+|.+|++|.+|.. .++...|-+.|
T Consensus 316 ~~~~~c~h~~~~~~iSgt~lR~~L~~G~~pP~~f~rpEV~~~L~~~~ 362 (552)
T 3cr8_A 316 LPEAEAPQGARLLTLSGEEFQRRMRAGLKIPEWYSFPEVLAELHRQT 362 (552)
T ss_dssp EEGGGSCTTCCEECCCHHHHHHHHTTTCCCCTTTSCHHHHHHHHHHS
T ss_pred EECCCCCCCCCEECCCHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHH
T ss_conf 87777898663755688999999976999991202632789999875
No 50
>1r6x_A ATP:sulfate adenylyltransferase; APS kinase-like domain; 1.40A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5
Probab=96.54 E-value=0.023 Score=34.80 Aligned_cols=161 Identities=15% Similarity=0.201 Sum_probs=89.7
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHH----HHHHCCCCCCCCCC
Q ss_conf 84999931565028999999999995027977999837986898478886620000789999----88511310002256
Q gi|254780846|r 19 GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK----ILEKMGFSALIRYK 94 (324)
Q Consensus 19 ~~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~----~l~~~Gid~vi~~~ 94 (324)
.+|++.-+-.=+|+||..+++++..... ..+++ ||. +.+.++.. .+.+-+.+ +++.+.-+.+++..
T Consensus 188 ~~VvafqTRNp~HraHe~ii~~a~~~~~--~~lli----~pl--vG~~k~gd--~~~~~r~~~~~~~~~~~p~~~~~l~~ 257 (395)
T 1r6x_A 188 DRVVAFQTRNPMHRAHRELTVRAAREAN--AKVLI----HPV--VGLTKPGD--IDHHTRVRVYQEIIKRYPNGIAFLSL 257 (395)
T ss_dssp CCEEEECCSSCCCHHHHHHHHHHHHHTT--CEEEE----CCB--CSBCCTTC--CCHHHHHHHHHHHGGGSSTTCEEECC
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHCC--CCEEE----EEC--CCCCCCCC--CCHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 7416887178897689999999998449--97899----702--22588666--68799999999999737887599804
Q ss_pred CH--HHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCC-CCCCCC--------CHHHHHHHHHCCCCEEEECCHHHC----
Q ss_conf 40--577522830268886214278029998345530-337755--------602467751012641676152230----
Q gi|254780846|r 95 FT--LETANYSAEQFIQKVLVEWLEVKTVITGTKFRF-GKDRAG--------DRGILQKRGEKYGFHTVFIDELRN---- 159 (324)
Q Consensus 95 F~--~~~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~F-G~~r~G--------d~~~L~~~~~~~g~~v~~i~~~~~---- 159 (324)
+. ..++. .-|..+..++.+.+++.+++||-|..= |.+..| -...+.++.++.|+++...+.+..
T Consensus 258 ~~~~~ryaG-PrEa~lhAiirkN~GcthfivGrdhAg~g~~~~~~~~Y~~~~a~~~~~~~~~~l~I~ii~~~~~~Yc~~c 336 (395)
T 1r6x_A 258 LPLAMRMSG-DREAVWHAIIRKNYGASHFIVGRDHAGPGKNSKGVDFYGPYDAQELVESYKHELDIEVVPFRMVTYLPDE 336 (395)
T ss_dssp BCCBCCCCH-HHHHHHHHHHHHHTTCSEEEECTTTTCCCBCTTSCBSSCTTHHHHHHHHHHHHHTCEEEECCCEEEEGGG
T ss_pred CCCCCCCCC-CHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCEEEECCC
T ss_conf 764335567-2677888999986699840037776788988767655783057789986531369649970513997378
Q ss_pred ---------C----CCCCCCHHHHHHHHHHHHH-------HHHHHHHHHCC
Q ss_conf ---------2----3330230368999872589-------99998500000
Q gi|254780846|r 160 ---------N----KSQIVSSSNIRTALTKGHV-------LNAAHLLGYRF 190 (324)
Q Consensus 160 ---------~----~~~~ISSt~IR~~l~~Gdi-------~~an~lLGr~y 190 (324)
. .-..+|+|.||++|.+|.. .++.+.|-+.|
T Consensus 337 ~~~~~~~~~~~~~~~~~~iSGt~ir~~L~~G~~~P~~f~rpeVa~~L~~~~ 387 (395)
T 1r6x_A 337 DRYAPIDQIDTTKTRTLNISGTELRRRLRVGGEIPEWFSYPEVVKILRESN 387 (395)
T ss_dssp TEEEETTTSCSSSCCCBCCCHHHHHHHHHHTCCCCTTTSCHHHHHHHTTC-
T ss_pred CCEEECCCCCCCCCCEEEECHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHC
T ss_conf 828876778997335473269999999977888893408899999999865
No 51
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1; transferase, ATP sulfurylase, APS kinase, PAPS; HET: ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5 c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A*
Probab=95.66 E-value=0.13 Score=29.85 Aligned_cols=164 Identities=16% Similarity=0.132 Sum_probs=90.7
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHH--CCC--CEEEEEECCCHHHHHCCCCCCCCCCHHHHHHH----HHHH--CCCC
Q ss_conf 849999315650289999999999950--279--77999837986898478886620000789999----8851--1310
Q gi|254780846|r 19 GGVVAIGNFDGIHLGHHLILEQAIKIA--NNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK----ILEK--MGFS 88 (324)
Q Consensus 19 ~~vvtiG~FDGvH~GHq~Li~~~~~~a--~~~--~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~----~l~~--~Gid 88 (324)
..|++.=.=.-+|+||..|++.+.+.. .+. +..++- |. ..+.++... +.+.+.+ ++.. +.-+
T Consensus 413 ~~VvaFqTRNp~HraHe~l~~~a~~~~~~~~~~~~~lli~----pl--vG~~k~gD~--~~~~r~~~~~~~l~~~~~p~~ 484 (630)
T 1x6v_B 413 DAVSAFQLRNPVHNGHALLMQDTHKQLLERGYRRPVLLLH----PL--GGWTKDDDV--PLMWRMKQHAAVLEEGVLNPE 484 (630)
T ss_dssp SEEEEEEESSCCCHHHHHHHHHHHHHHHHHTCSSEEEEEE----EB--CSCCCTTSC--CHHHHHHHHHHHHHTTSSCGG
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEE----CC--CCCCCCCCC--CHHHHHHHHHHHHHHCCCCCC
T ss_conf 5145530488986678999999999987366667638984----04--578886666--758999999999985358867
Q ss_pred CCCCCCC--HHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCC-CCCCCC-CC-------HHHHHHHHHCCCCEEEECCHH
Q ss_conf 0022564--057752283026888621427802999834553-033775-56-------024677510126416761522
Q gi|254780846|r 89 ALIRYKF--TLETANYSAEQFIQKVLVEWLEVKTVITGTKFR-FGKDRA-GD-------RGILQKRGEKYGFHTVFIDEL 157 (324)
Q Consensus 89 ~vi~~~F--~~~~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~-FG~~r~-Gd-------~~~L~~~~~~~g~~v~~i~~~ 157 (324)
.+++.+| ..-+|. .-|.....++.+.+++.+++||-|.. .|.... || ...+.++..+.|+++...+++
T Consensus 485 ~~~l~~~p~~mryAG-PREA~lhAiirkN~GcThfiVGRDHAG~g~~~~~~~~Y~~~~a~~i~~~~~~~l~I~ii~~~e~ 563 (630)
T 1x6v_B 485 TTVVAIFPSPMMYAG-PTEVQWHCRARMVAGANFYIVGRDPAGMPHPETGKDLYEPSHGAKVLTMAPGLITLEIVPFRVA 563 (630)
T ss_dssp GEEECCBCCCCCCCH-HHHHHHHHHHHHHTTCSEEEECSSTTCCBCTTTCSBSSCTTHHHHHHHHCTTCTTCEEEECCCE
T ss_pred CEEECCCCCCCCCCC-HHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCE
T ss_conf 458603675546678-0899999999997799836468887898877767677784678999983822258458980514
Q ss_pred HC---------------CCCCCCCHHHHHHHHHHHHH-------HHHHHHHHHCCH
Q ss_conf 30---------------23330230368999872589-------999985000000
Q gi|254780846|r 158 RN---------------NKSQIVSSSNIRTALTKGHV-------LNAAHLLGYRFT 191 (324)
Q Consensus 158 ~~---------------~~~~~ISSt~IR~~l~~Gdi-------~~an~lLGr~y~ 191 (324)
.. .+-..||.|.||++|.+|.. .++.+.|-+.|.
T Consensus 564 ~Yc~~c~~~~~~~~~~~~~~~~iSGt~lR~~L~~G~~pP~~f~rpeVa~iL~~~y~ 619 (630)
T 1x6v_B 564 AYNKKKKRMDYYDSEHHEDFEFISGTRMRKLAREGQKPPEGFMAPKAWTVLTEYYK 619 (630)
T ss_dssp EEETTTTEEEECCSTTGGGEECCCHHHHHHHHHTTCCCCTTSSCHHHHHHHHHHHH
T ss_pred EEECCCCEEEECCCCCCCCEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 89756780640578997671145799999999785999955087899999999998
No 52
>2j6v_A UV endonuclease, UVDE; plasmid, TIM barrel, DNA repair, DNA binding protein, lyase; HET: KCX ALY; 1.55A {Thermus thermophilus} PDB: 3bzg_A 3c0s_A* 3c0l_A 3c0q_A* 3bzj_A
Probab=67.52 E-value=3.7 Score=20.47 Aligned_cols=112 Identities=16% Similarity=0.102 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCC---CCCHHHHHHHHHHHCCCCC--CCCC-CCHHHHHHCCCHHHH
Q ss_conf 999999999502797799983798689847888662---0000789999885113100--0225-640577522830268
Q gi|254780846|r 35 HLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF---TLSPPSIQEKILEKMGFSA--LIRY-KFTLETANYSAEQFI 108 (324)
Q Consensus 35 q~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~---~l~~~~~k~~~l~~~Gid~--vi~~-~F~~~~a~ls~e~Fi 108 (324)
+..++++-+.|+..+. -+||-|.+-.++....+.. .+..++.-.+++..+|.+. +++. .....-+.-..+.|+
T Consensus 102 ~~~l~~iG~~ak~~~i-RLS~HP~qf~vL~S~~~~vve~Si~~L~~ha~i~d~mG~~~~~i~iH~Gg~~gdk~~~~~rf~ 180 (301)
T 2j6v_A 102 EEELARLGALARAFGQ-RLSMHPGQYVNPGSPDPEVVERSLAELRYSARLLSLLGAEDGVLVLHLGGAYGEKGKALRRFV 180 (301)
T ss_dssp HHHHHHHHHHHHHTTC-EEEECCCTTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCTTCEEEEECCCCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCC-EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHH
T ss_conf 9999999899998293-499669855046899779999999999999999987246677489975787896389999999
Q ss_pred HHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEE
Q ss_conf 88621427802999834553033775560246775101264167
Q gi|254780846|r 109 QKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTV 152 (324)
Q Consensus 109 ~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~ 152 (324)
+++-...---+.+++..|=+ .+++++|-++|++.|+.++
T Consensus 181 ~n~~~~~~v~~rL~lENddk-----~~sv~dll~i~~~~giPiV 219 (301)
T 2j6v_A 181 ENLRGEEEVLRYLALENDER-----LWNVEEVLKAAEALGVPVV 219 (301)
T ss_dssp HHHTTCHHHHHHEEEECCSS-----SCCHHHHHHHHHHHTCCEE
T ss_pred HHHCCCCCCEEEEEEECCCC-----CCCHHHHHHHHHHCCCCEE
T ss_conf 86047730012576633886-----5789999999983399888
No 53
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=57.08 E-value=9.6 Score=17.74 Aligned_cols=41 Identities=7% Similarity=-0.048 Sum_probs=20.2
Q ss_pred CCCCCCHHHHHHHHHCCCCEEEECCHHHCCCCCCCCHHHHHHHHHHH
Q ss_conf 37755602467751012641676152230233302303689998725
Q gi|254780846|r 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177 (324)
Q Consensus 131 ~~r~Gd~~~L~~~~~~~g~~v~~i~~~~~~~~~~ISSt~IR~~l~~G 177 (324)
....-....|+++.+..+-.+.++ .++| |++.+|.++++++
T Consensus 159 ~~~~~~i~~L~~l~~~~~~~i~I~----vgGG--I~~~Ni~~l~~~~ 199 (224)
T 2bdq_A 159 EPIIENIKHIKALVEYANNRIEIM----VGGG--VTAENYQYICQET 199 (224)
T ss_dssp CCGGGGHHHHHHHHHHHTTSSEEE----ECSS--CCTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEE----ECCC--CCHHHHHHHHHHH
T ss_conf 349999999999999609991899----7799--7999999999965
No 54
>1p5d_X PMM, phosphomannomutase; alpha/beta protein, phosphohexomutase, phosphoserine, enzyme-ligand complex, enzyme-metal complex, isomerase; HET: SEP G1P; 1.60A {Pseudomonas aeruginosa} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1k35_A* 1p5g_X* 1pcj_X* 1pcm_X* 1k2y_X* 2h5a_X* 2h4l_X* 2fkf_A* 3bkq_X* 3c04_A* 2fkm_X*
Probab=54.78 E-value=4.9 Score=19.63 Aligned_cols=29 Identities=14% Similarity=0.088 Sum_probs=15.0
Q ss_pred CHHHHHHHHCCCCCEEEEEEC--CCCCCCCCC
Q ss_conf 302688862142780299983--455303377
Q gi|254780846|r 104 AEQFIQKVLVEWLEVKTVITG--TKFRFGKDR 133 (324)
Q Consensus 104 ~e~Fi~~iL~~~l~~k~ivVG--~Df~FG~~r 133 (324)
+..++.+++ +.++++.+.+. .|-.|+...
T Consensus 184 ~~~~~~~il-~~lg~~~~~i~~~~dg~f~~~~ 214 (463)
T 1p5d_X 184 AGVIAPQLI-EALGCSVIPLYCEVDGNFPNHH 214 (463)
T ss_dssp GGGTHHHHH-HHHHEEEEEESCSCCTTCCSSC
T ss_pred HHHHHHHHH-HHCCCCEEEECCCCCCCCCCCC
T ss_conf 899999999-9749939998162599889999
No 55
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=48.49 E-value=11 Score=17.49 Aligned_cols=26 Identities=12% Similarity=0.179 Sum_probs=17.3
Q ss_pred CHHHHHHHHHHHHHHCCCCE-EEEEEC
Q ss_conf 28999999999995027977-999837
Q gi|254780846|r 31 HLGHHLILEQAIKIANNSPI-TVLSFN 56 (324)
Q Consensus 31 H~GHq~Li~~~~~~a~~~~~-~viTF~ 56 (324)
|.|=.+-++++++.|+..+. +++-+.
T Consensus 64 ~~Gt~~df~~lv~~aH~~GI~VilD~V 90 (405)
T 1ht6_A 64 KYGNAAELKSLIGALHGKGVQAIADIV 90 (405)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEECCC
T ss_conf 378999999999999988899995302
No 56
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, alpha-1,4-glucan-4-glucanohydrolase, thermostability, calcium, sodium; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=47.74 E-value=14 Score=16.66 Aligned_cols=26 Identities=19% Similarity=0.166 Sum_probs=18.2
Q ss_pred CHHHHHHHHHHHHHHCCCCE-EEEEEC
Q ss_conf 28999999999995027977-999837
Q gi|254780846|r 31 HLGHHLILEQAIKIANNSPI-TVLSFN 56 (324)
Q Consensus 31 H~GHq~Li~~~~~~a~~~~~-~viTF~ 56 (324)
|.|-.+=++++++.|++.+. +++-+.
T Consensus 77 ~~Gt~~dfk~LV~~aH~~Gi~VilD~V 103 (515)
T 1hvx_A 77 KYGTKAQYLQAIQAAHAAGMQVYADVV 103 (515)
T ss_dssp SSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEC
T ss_conf 899999999999999988898999978
No 57
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=45.41 E-value=15 Score=16.43 Aligned_cols=14 Identities=14% Similarity=0.107 Sum_probs=9.7
Q ss_pred HHHCCHHHHHHHHC
Q ss_conf 00000000012210
Q gi|254780846|r 186 LGYRFTIESDVIHG 199 (324)
Q Consensus 186 LGr~y~i~G~Vv~G 199 (324)
+|-.|..-|.|-..
T Consensus 127 ~g~DYi~~gpvf~T 140 (215)
T 1xi3_A 127 KGADYLGAGSVFPT 140 (215)
T ss_dssp HTCSEEEEECSSCC
T ss_pred CCCCEEEECCCCCC
T ss_conf 69988996244306
No 58
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=43.45 E-value=14 Score=16.76 Aligned_cols=51 Identities=8% Similarity=0.126 Sum_probs=26.6
Q ss_pred CHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCCC
Q ss_conf 0078999988511310002256405775228302688862142780299983455303
Q gi|254780846|r 73 SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130 (324)
Q Consensus 73 ~~~~~k~~~l~~~Gid~vi~~~F~~~~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG 130 (324)
.+.++-.+++ +.|++.+++-. .+-.+| +|+++ +.+.++.+.++++-|++.+
T Consensus 87 rs~~~~~~~l-~~G~~rvii~s----~~~~~~-~~~~~-~~~~~g~~~iv~siD~~~~ 137 (253)
T 1h5y_A 87 RSLEDATTLF-RAGADKVSVNT----AAVRNP-QLVAL-LAREFGSQSTVVAIDAKWN 137 (253)
T ss_dssp CSHHHHHHHH-HHTCSEEEESH----HHHHCT-HHHHH-HHHHHCGGGEEEEEEEEEC
T ss_pred CCHHHHHHHH-HCCCCEEECCC----CCEECC-HHHHH-HHHHCCCCEEEEEEEEEEC
T ss_conf 1177677888-64898895386----034386-47799-9987699529999999985
No 59
>3cta_A Riboflavin kinase; structural genomics, transferase, PSI-2, protein structure initiative; 2.20A {Thermoplasma acidophilum dsm 1728} SCOP: a.4.5.28 b.43.5.2
Probab=41.58 E-value=7.1 Score=18.61 Aligned_cols=103 Identities=22% Similarity=0.383 Sum_probs=50.2
Q ss_pred HHHHHHHHHHH--CCHHHHHHHHCCCCCC--------------EEEE---E-EEEEEHHCCCCC-------CHHHHEEEE
Q ss_conf 89999985000--0000001221002011--------------0111---1-121100002223-------101100024
Q gi|254780846|r 178 HVLNAAHLLGY--RFTIESDVIHGEKIGR--------------TLGF---P-TANMQLSPDILL-------KEGVYAIRF 230 (324)
Q Consensus 178 di~~an~lLGr--~y~i~G~Vv~G~~~Gr--------------~lGf---P-TaNi~~~~~~~p-------~~GVY~~~v 230 (324)
..+.-.+++.- ...+.|.|+.|-+.|+ .||| | |.||.+++.-++ ..||-.--.
T Consensus 81 ~~~~~~ri~~~~~~~~l~G~V~sGlGeg~~y~s~~~y~~qf~~~lg~~p~pGTLNi~~~~~~~~~~~~l~~~~~i~i~gf 160 (230)
T 3cta_A 81 EFADLSRILAIKNNVVITGTVTSGMGEGRYYVARKQYIIQFQEKLGIIPYLGTLNIKVDQASLPELRKIRGFRGIHIEGF 160 (230)
T ss_dssp HHHHHHHHTTCCCCEEEEEEECC------------CCHHHHHHHSCSCCCC---EEEECGGGHHHHHHHHHSCCEEECCE
T ss_pred HHHHHHHHHHCCCHHHEEEEEECCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEECCCC
T ss_conf 99999999704622214324862866620565268899998887199888886353358256799997535798680786
Q ss_pred EEEECCCCCHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEECCCCCCC
Q ss_conf 7630565621105789972677971499999406785518988999946000088746
Q gi|254780846|r 231 RTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKF 288 (324)
Q Consensus 231 ~~~~~~~~~~v~niG~~PT~~~~~~~~iE~hildf~~dlYg~~i~v~f~~~iR~e~kF 288 (324)
.. +++.|.++..+- -+++ + ++.+++==+..-|...++|-=-.+||+....
T Consensus 161 ~~-~~~~fg~~~~~~--~~i~--~---~~~aii~P~~t~h~~~~EiIap~~LR~~L~l 210 (230)
T 3cta_A 161 KT-EDRTFGSVKAFP--AKIQ--N---IPCFVIMPERTVYTDVIEIISDKYLREEINL 210 (230)
T ss_dssp EC---CEECCEEEEE--EEET--T---EEEEEEEESSCCCCSEEEEECC---------
T ss_pred CC-CCCCEEEEEEEE--EEEC--C---CCEEEEECCCCCCCCEEEEECCHHHHHHCCC
T ss_conf 76-896040079999--9987--7---1159985267898775899767536740689
No 60
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=37.17 E-value=20 Score=15.61 Aligned_cols=144 Identities=13% Similarity=0.133 Sum_probs=69.7
Q ss_pred ECCCCCCCCCCCCCCCE-EEEEECCCC-CCHHHHHHHHHHHHHHC-CCC--EEEEEECCCHHHHHCCCCCCC--CCCHHH
Q ss_conf 24885211276101884-999931565-02899999999999502-797--799983798689847888662--000078
Q gi|254780846|r 4 FHNIEINQSLPNHLKGG-VVAIGNFDG-IHLGHHLILEQAIKIAN-NSP--ITVLSFNPHPRTIIQSSSPIF--TLSPPS 76 (324)
Q Consensus 4 ~~~~~~~~~~p~~~~~~-vvtiG~FDG-vH~GHq~Li~~~~~~a~-~~~--~~viTF~p~P~~~~~~~~~~~--~l~~~~ 76 (324)
|-+=|..-.++++.++. |+-+..+.+ ..--..+|+--+-...+ +.+ .+|+-|-|.-+ +++... -..+..
T Consensus 41 FpDGE~~v~i~~~vrg~~V~ivqs~~~~~nd~l~eLll~~~a~r~~gA~~I~~ViPYl~YsR----QDr~~~~ge~isak 116 (317)
T 1dku_A 41 FSDGEVQINIEESIRGCDCYIIQSTSDPVNEHIMELLIMVDALKRASAKTINIVIPYYGYAR----QDRKARSREPITAK 116 (317)
T ss_dssp CTTSCEEEEECSCCTTCEEEEECCCCSSHHHHHHHHHHHHHHHHHTTCSEEEEEESSCTTTT----CCSCSSTTCCCHHH
T ss_pred CCCCCEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCE----ECHHCCCCCCHHHH
T ss_conf 89997799878877898699996789994277999999999998689955999936664332----00002799870599
Q ss_pred HHHHHHHHCCCCCCCCCCCHH---------HHHHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCC
Q ss_conf 999988511310002256405---------77522830268886214278029998345530337755602467751012
Q gi|254780846|r 77 IQEKILEKMGFSALIRYKFTL---------ETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKY 147 (324)
Q Consensus 77 ~k~~~l~~~Gid~vi~~~F~~---------~~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~ 147 (324)
.=.++|+.+|+|.++.++--. ...++++...+.+++..+-.-..++|+.|. |....-+.+.+..
T Consensus 117 ~va~lL~~~g~d~vit~DlH~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~vvVaPD~-------Ga~~ra~~~A~~l 189 (317)
T 1dku_A 117 LFANLLETAGATRVIALDLHAPQIQGFFDIPIDHLMGVPILGEYFEGKNLEDIVIVSPDH-------GGVTRARKLADRL 189 (317)
T ss_dssp HHHHHHHHHTCCEEEEESCSSGGGGGGCSSCEEEECSHHHHHHHHHTTTCCSEEEEESSG-------GGHHHHHHHHHHT
T ss_pred HHHHHHHHCCCCEEEEECCCCHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEECCCC-------CHHHHHHHHHHHC
T ss_conf 999887624997799963684877504357741000214677777640755554778994-------3799999999982
Q ss_pred CCEEEECCHHH
Q ss_conf 64167615223
Q gi|254780846|r 148 GFHTVFIDELR 158 (324)
Q Consensus 148 g~~v~~i~~~~ 158 (324)
|..+..+...+
T Consensus 190 ~~~~~~~~K~R 200 (317)
T 1dku_A 190 KAPIAIIDKRR 200 (317)
T ss_dssp TCCEEEEECC-
T ss_pred CCCEEEEEEEE
T ss_conf 99989999870
No 61
>3lx4_A Fe-hydrogenase; HYDA, H-cluster, [4Fe-4S] cluster, IR cluster, insertion, biosynthesis, maturation, intermediate, evolution; 1.97A {Chlamydomonas reinhardtii}
Probab=36.51 E-value=21 Score=15.54 Aligned_cols=86 Identities=13% Similarity=0.223 Sum_probs=48.0
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHH-C-CCCEEEEEECCCHHHHHCCCCCCCC-CCHHHHHHHHHHHCCCCCCCCCCCHHH
Q ss_conf 999315650289999999999950-2-7977999837986898478886620-000789999885113100022564057
Q gi|254780846|r 22 VAIGNFDGIHLGHHLILEQAIKIA-N-NSPITVLSFNPHPRTIIQSSSPIFT-LSPPSIQEKILEKMGFSALIRYKFTLE 98 (324)
Q Consensus 22 vtiG~FDGvH~GHq~Li~~~~~~a-~-~~~~~viTF~p~P~~~~~~~~~~~~-l~~~~~k~~~l~~~Gid~vi~~~F~~~ 98 (324)
.|+--|+-+ |..++.+.+.. . ..+.+|++.-|-.+.-|...-.... -.+..+-...|+++|+|+|+-..|-.+
T Consensus 20 ~a~~~~~~~----~~~~~~l~~~~~~~~~K~vV~~iaP~~r~sla~~fgl~~~~~~~~kl~~~Lk~LGF~~V~Dt~~gad 95 (457)
T 3lx4_A 20 AAEAPLSHV----QQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGAD 95 (457)
T ss_dssp -----CCHH----HHHHHHHHSCTTCTTCCEEEEEECHHHHHHGGGGGTCCTTCSCHHHHHHHHHHTTCSEEEETHHHHH
T ss_pred HHCCCHHHH----HHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEECHHHHH
T ss_conf 333755369----9999998564448767889999486889999998588956558999999999769999998768889
Q ss_pred HHH-CCCHHHHHHH
Q ss_conf 752-2830268886
Q gi|254780846|r 99 TAN-YSAEQFIQKV 111 (324)
Q Consensus 99 ~a~-ls~e~Fi~~i 111 (324)
++- -++++|++++
T Consensus 96 ltl~eea~Ef~~r~ 109 (457)
T 3lx4_A 96 LTIMEEGSELLHRL 109 (457)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99999899999998
No 62
>3ju2_A Uncharacterized protein SMC04130; structural genomics, PSI-2, TIM barrel protein, protein structure initiative, Zn binding domain; 1.80A {Sinorhizobium meliloti}
Probab=35.41 E-value=22 Score=15.43 Aligned_cols=81 Identities=12% Similarity=0.074 Sum_probs=47.5
Q ss_pred CHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHC-CCCCEEEEEECCCCCCCC--CCCCCHHH---HHHHHHC
Q ss_conf 00789999885113100022564057752283026888621-427802999834553033--77556024---6775101
Q gi|254780846|r 73 SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV-EWLEVKTVITGTKFRFGK--DRAGDRGI---LQKRGEK 146 (324)
Q Consensus 73 ~~~~~k~~~l~~~Gid~vi~~~F~~~~a~ls~e~Fi~~iL~-~~l~~k~ivVG~Df~FG~--~r~Gd~~~---L~~~~~~ 146 (324)
.++++.+.++++.|++.+=+ +...+...+++++-+ +|. ..+.+..+.++.+|...- .|+..++. +-++++.
T Consensus 19 ~~l~e~l~~~a~~G~~~IEl--~~~~~~~~~~~e~~~-~l~~~gl~v~~~~~~~~~~~~d~~~~~~~i~~~~~~i~~a~~ 95 (284)
T 3ju2_A 19 CGFAEAVDICLKHGITAIAP--WRDQVAAIGLGEAGR-IVRANGLKLTGLCRGGFFPAPDASGREKAIDDNRRAVDEAAE 95 (284)
T ss_dssp CCHHHHHHHHHHTTCCEEEC--BHHHHHHHCHHHHHH-HHHHTTCEESCEEEEECCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHCCCEEEE--CCCCCCCCCHHHHHH-HHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999819998997--776678789999999-999839959998767666889989999999999999999999
Q ss_pred CCCEEEECCH
Q ss_conf 2641676152
Q gi|254780846|r 147 YGFHTVFIDE 156 (324)
Q Consensus 147 ~g~~v~~i~~ 156 (324)
.|.+++++.+
T Consensus 96 lG~~~i~~~~ 105 (284)
T 3ju2_A 96 LGADCLVLVA 105 (284)
T ss_dssp HTBSCEEEEC
T ss_pred HCCCEEEECC
T ss_conf 4998369567
No 63
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A substrate tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=33.61 E-value=15 Score=16.54 Aligned_cols=26 Identities=15% Similarity=0.261 Sum_probs=18.4
Q ss_pred CCCCCCCHHHHHHCCCHHHHHHHHCC
Q ss_conf 00225640577522830268886214
Q gi|254780846|r 89 ALIRYKFTLETANYSAEQFIQKVLVE 114 (324)
Q Consensus 89 ~vi~~~F~~~~a~ls~e~Fi~~iL~~ 114 (324)
.++-+.|-+|.+.-...++++++|..
T Consensus 189 NI~GvQFHPEkS~~~G~~ll~nFlk~ 214 (555)
T 1jvn_A 189 NIFATQFHPEKSGKAGLNVIENFLKQ 214 (555)
T ss_dssp TEEEESSBGGGSHHHHHHHHHHHHTT
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHHC
T ss_conf 99999899983167799999999826
No 64
>2hcu_A 3-isopropylmalate dehydratase small subunit; beta barrel, lyase; 2.10A {Streptococcus mutans}
Probab=32.16 E-value=25 Score=15.10 Aligned_cols=39 Identities=26% Similarity=0.434 Sum_probs=30.6
Q ss_pred CCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHH
Q ss_conf 2780299983455303377556024677510126416761522
Q gi|254780846|r 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDEL 157 (324)
Q Consensus 115 ~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~ 157 (324)
.-+.+-||.|.||-.|.=|+.-+--|+.+ |+++++-+.+
T Consensus 83 ~~~a~IlVaG~NFGcGSSREhA~~aL~~~----Gi~aVIA~SF 121 (213)
T 2hcu_A 83 YREASILITGDNFGAGSSREHAAWALADY----GFKVIVAGSF 121 (213)
T ss_dssp GTTCCEEEECSSBTCSSCCHHHHHHHHHH----TCCEEEESCB
T ss_pred CCCCCEEEECCCCCCCCCHHHHHHHHHHC----CCCEEEHHHH
T ss_conf 57870899446323576347898999985----9768842449
No 65
>2gti_A Replicase polyprotein 1AB; MHV, NSP15, F307L, viral protein; 2.15A {Murine hepatitis virus strain A59} SCOP: c.66.1.48 d.294.1.2 PDB: 2gth_A
Probab=31.29 E-value=7.7 Score=18.37 Aligned_cols=11 Identities=9% Similarity=0.341 Sum_probs=6.3
Q ss_pred HHHHHHCCCCC
Q ss_conf 99885113100
Q gi|254780846|r 79 EKILEKMGFSA 89 (324)
Q Consensus 79 ~~~l~~~Gid~ 89 (324)
+++|+.+|+|.
T Consensus 70 ~~iLrnLgV~~ 80 (370)
T 2gti_A 70 LKLFRNLNIDV 80 (370)
T ss_dssp HHHHHHTTCCE
T ss_pred HHHHHCCCCEE
T ss_conf 56774488258
No 66
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, RAW starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii h 168} PDB: 3bcd_A* 3bcf_A
Probab=27.93 E-value=29 Score=14.63 Aligned_cols=23 Identities=17% Similarity=0.096 Sum_probs=12.0
Q ss_pred HHHHHHHHHHCCCCCCCCCCCHH
Q ss_conf 78999988511310002256405
Q gi|254780846|r 75 PSIQEKILEKMGFSALIRYKFTL 97 (324)
Q Consensus 75 ~~~k~~~l~~~Gid~vi~~~F~~ 97 (324)
+.+|+..|+++||+.+.+.|..+
T Consensus 152 i~~kl~yL~~lGitaIWL~P~~k 174 (599)
T 3bc9_A 152 LAERAPELAEAGFTAVWLPPANK 174 (599)
T ss_dssp HHHHHHHHHHHTCCEEECCCCSE
T ss_pred HHHHHHHHHHCCCCEEEECCCCC
T ss_conf 99989999974998899280654
No 67
>3h5j_A 3-isopropylmalate dehydratase small subunit; leucine biosynthesis, isopropylmalate isomerase, LEUD, amino-acid biosynthesis; 1.20A {Mycobacterium tuberculosis} PDB: 3h5h_A 3h5e_A
Probab=27.65 E-value=29 Score=14.60 Aligned_cols=47 Identities=21% Similarity=0.354 Sum_probs=32.7
Q ss_pred HHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHH
Q ss_conf 2688862142780299983455303377556024677510126416761522
Q gi|254780846|r 106 QFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDEL 157 (324)
Q Consensus 106 ~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~ 157 (324)
+|+.+ ....-+.+-||.|.||-.|.=|+--+--|+.+ |+++++-+.+
T Consensus 54 ~f~~~-~~~~~~~~IlVaG~NFGcGSSREhA~~al~~~----Gi~aVIA~SF 100 (171)
T 3h5j_A 54 AFVLN-LSPFDRGSVLVAGPDFGTGSSREHAVWALMDY----GFRVVISSRF 100 (171)
T ss_dssp TSGGG-STTGGGCCEEEECSSBTCSSCCHHHHHHHHHH----TCCEEEESSB
T ss_pred CCCCC-CCCCCCCCEEEECCCCCCCCCHHHHHHHHHHC----CCCEEEEHHH
T ss_conf 32001-34668971999778426773088999999986----9789983579
No 68
>2is3_A Ribonuclease T; RNAse, exoribonuclease, exonuclease, hydrolase, stable RNA maturation, tRNA END-turnover; 3.10A {Escherichia coli K12}
Probab=26.92 E-value=25 Score=15.02 Aligned_cols=73 Identities=11% Similarity=0.115 Sum_probs=37.7
Q ss_pred HHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 26888621427802999834553033775560246775101264167615223023330230368999872589999985
Q gi|254780846|r 106 QFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185 (324)
Q Consensus 106 ~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~~~~~~~~ISSt~IR~~l~~Gdi~~an~l 185 (324)
+|+.+.+.....-..++||.|..| |...|++.+..+|++....++.... -+....|..+....++.+...
T Consensus 101 ~~i~~~~~~~~~~~~~lVaHNa~F------D~~fL~~~~~r~~l~~~~~~~~~~i----Dt~~~~~~~~~~~~L~~l~~~ 170 (215)
T 2is3_A 101 KVVRKGIKASGCNRAIMVAHNANF------DHSFMMAAAERASLKRNPFHPFATF----DTAALAGLALGQTVLSKACQT 170 (215)
T ss_dssp HHHHHHHHHHTCSEEEEEETTHHH------HHHHHHHHHHHHTCTTCCEEEEEEE----EHHHHHHHHHSCCSHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCCCCHH------HHHHHHHHHHHCCCCCCCCCCHHHH----HHHHHHHHHHCCCCHHHHHHH
T ss_conf 999999876314655010037687------6999999999839998865330167----799999887363249999998
Q ss_pred HHH
Q ss_conf 000
Q gi|254780846|r 186 LGY 188 (324)
Q Consensus 186 LGr 188 (324)
+|-
T Consensus 171 ~~i 173 (215)
T 2is3_A 171 AGM 173 (215)
T ss_dssp TTC
T ss_pred CCC
T ss_conf 599
No 69
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=25.28 E-value=11 Score=17.39 Aligned_cols=25 Identities=20% Similarity=0.490 Sum_probs=18.0
Q ss_pred CHHHHHHHHHHHHHHCCCCE-EEEEE
Q ss_conf 28999999999995027977-99983
Q gi|254780846|r 31 HLGHHLILEQAIKIANNSPI-TVLSF 55 (324)
Q Consensus 31 H~GHq~Li~~~~~~a~~~~~-~viTF 55 (324)
|+|-.+=|+++++.|++... +++-+
T Consensus 103 ~~Gt~~dfk~LV~~aH~~GIkVilD~ 128 (686)
T 1qho_A 103 HFGNWTTFDTLVNDAHQNGIKVIVDF 128 (686)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 13999999999999998799999998
No 70
>3bp1_A NADPH-dependent 7-cyano-7-deazaguanine reductase; alpha-beta structure, structural genomics, PSI-2; HET: MSE GUN; 1.53A {Vibrio cholerae o1 biovar eltor str}
Probab=24.41 E-value=33 Score=14.22 Aligned_cols=22 Identities=18% Similarity=0.022 Sum_probs=13.6
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 088746898999999999799999
Q gi|254780846|r 283 RPEIKFKDIEKLKIYMGEDEKKAR 306 (324)
Q Consensus 283 R~e~kF~s~~~L~~qI~~D~~~a~ 306 (324)
|+..-| -|+..++|-.|+..+-
T Consensus 230 R~~~~F--hE~~ve~If~dl~~~~ 251 (290)
T 3bp1_A 230 REHNEF--HEQCVERIFTDIMRYC 251 (290)
T ss_dssp TTCCCC--HHHHHHHHHHHHHHHH
T ss_pred HHCCHH--HHHHHHHHHHHHHHHC
T ss_conf 722757--9999999999999854
No 71
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=24.03 E-value=34 Score=14.18 Aligned_cols=24 Identities=17% Similarity=0.151 Sum_probs=14.7
Q ss_pred CHHHHHHHHHHHHHHCCCCE-EEEE
Q ss_conf 28999999999995027977-9998
Q gi|254780846|r 31 HLGHHLILEQAIKIANNSPI-TVLS 54 (324)
Q Consensus 31 H~GHq~Li~~~~~~a~~~~~-~viT 54 (324)
|.|=.+=++++++.++..+. +++-
T Consensus 74 ~~Gt~~df~~LV~~~H~~GI~VilD 98 (483)
T 3bh4_A 74 KYGTKSELQDAIGSLHSRNVQVYGD 98 (483)
T ss_dssp SSCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEE
T ss_conf 8999999999999999889989999
No 72
>2wq7_A RE11660P; lyase-DNA complex, DNA repair, DNA lesion, lyase; HET: TDY Z FAD; 2.00A {Drosophila melanogaster} PDB: 2wb2_A* 2wq6_A* 3cvu_A* 3cvv_A* 3cvy_A* 3cvw_A* 3cvx_A*
Probab=23.89 E-value=34 Score=14.16 Aligned_cols=92 Identities=12% Similarity=0.087 Sum_probs=50.8
Q ss_pred EEEEECCCHHHHHCCC--CCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCC
Q ss_conf 9998379868984788--86620000789999885113100022564057752283026888621427802999834553
Q gi|254780846|r 51 TVLSFNPHPRTIIQSS--SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128 (324)
Q Consensus 51 ~viTF~p~P~~~~~~~--~~~~~l~~~~~k~~~l~~~Gid~vi~~~F~~~~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~ 128 (324)
.|+.|+|.-......+ ...+++-++.+=.+-|+++|++-++.. =+|.+.+.+ |.+.+++..|++-.++.
T Consensus 65 pvfi~dp~~~~~~~~~~~r~~Fl~esL~~L~~~L~~lg~~L~v~~--------G~~~~~l~~-L~~~~~i~~V~~n~~~~ 135 (543)
T 2wq7_A 65 PIFILDPGILDWMQVGANRWRFLQQTLEDLDNQLRKLNSRLFVVR--------GKPAEVFPR-IFKSWRVEMLTFETDIE 135 (543)
T ss_dssp EEEEECTTGGGCTTSCHHHHHHHHHHHHHHHHHHHHTTCCCEEEE--------SCHHHHHHH-HHHHTTEEEEEEECCCS
T ss_pred EEEEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEE--------CCHHHHHHH-HHHHCCCCEEEEECCCC
T ss_conf 999989154357997899999999999999999997799779997--------899999999-99976998899943357
Q ss_pred C-CCCCCCCHHHHHHHHHCCCCEEEEC
Q ss_conf 0-3377556024677510126416761
Q gi|254780846|r 129 F-GKDRAGDRGILQKRGEKYGFHTVFI 154 (324)
Q Consensus 129 F-G~~r~Gd~~~L~~~~~~~g~~v~~i 154 (324)
- ...| -..++++++..|+.+...
T Consensus 136 ~~~~~r---D~~v~~~l~~~~i~~~~~ 159 (543)
T 2wq7_A 136 PYSVTR---DAAVQKLAKAEGVRVETH 159 (543)
T ss_dssp HHHHHH---HHHHHHHHHHHTCEEEEE
T ss_pred HHHHHH---HHHHHHHHHHHHCCCCCC
T ss_conf 899999---999988776531021123
No 73
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=22.43 E-value=29 Score=14.63 Aligned_cols=23 Identities=9% Similarity=0.170 Sum_probs=11.7
Q ss_pred HHHHHHHHHCCCCCCCCCCCHHH
Q ss_conf 89999885113100022564057
Q gi|254780846|r 76 SIQEKILEKMGFSALIRYKFTLE 98 (324)
Q Consensus 76 ~~k~~~l~~~Gid~vi~~~F~~~ 98 (324)
-+-.+.+.+.|+|.+++++.+..
T Consensus 34 ~~~a~~~~~~g~dei~ivDl~~~ 56 (252)
T 1ka9_F 34 VEAARAYDEAGADELVFLDISAT 56 (252)
T ss_dssp HHHHHHHHHHTCSCEEEEECCSS
T ss_pred HHHHHHHHHCCCCEEEEEECCCC
T ss_conf 99999999869998999953254
No 74
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus HB8}
Probab=21.61 E-value=15 Score=16.40 Aligned_cols=26 Identities=19% Similarity=0.270 Sum_probs=15.7
Q ss_pred CHHHHHHHHHHHHHHCCCCE-EEEEEC
Q ss_conf 28999999999995027977-999837
Q gi|254780846|r 31 HLGHHLILEQAIKIANNSPI-TVLSFN 56 (324)
Q Consensus 31 H~GHq~Li~~~~~~a~~~~~-~viTF~ 56 (324)
|.|-.+-++.+++.|+..+. +++-+.
T Consensus 92 ~~Gt~~d~k~lv~~ah~~Gi~VilD~V 118 (475)
T 2z1k_A 92 ILGGNEALRHLLEVAHAHGVRVILDGV 118 (475)
T ss_dssp GGTCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEECCC
T ss_conf 548979999999999766868996244
No 75
>3hv0_A Tryptophanyl-tRNA synthetase; tRNA-ligase, ATP-binding, aminoacyl-tRNA synthetase, ligase, nucleotide-binding; HET: TRP; 2.42A {Cryptosporidium parvum iowa II}
Probab=20.69 E-value=40 Score=13.75 Aligned_cols=41 Identities=12% Similarity=0.163 Sum_probs=22.2
Q ss_pred CCEEEEEEC---CCCCCHHHHHHHHHHHHH--HCCCCEEEEEECCC
Q ss_conf 884999931---565028999999999995--02797799983798
Q gi|254780846|r 18 KGGVVAIGN---FDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58 (324)
Q Consensus 18 ~~~vvtiG~---FDGvH~GHq~Li~~~~~~--a~~~~~~viTF~p~ 58 (324)
++..+-.|. =|.+|+||.-.+-.+... +-+.+.+++.=|+|
T Consensus 73 k~~~vytG~~PSg~~lHlGh~v~~~~~~~~q~~~~~~v~i~iaD~~ 118 (393)
T 3hv0_A 73 ELFYLYTGRGPSSESLHVGHLVPFLFTKYLQDTFKVPLVIQLTDDE 118 (393)
T ss_dssp CCCEEEEEECCSSSSCBSTTHHHHHHHHHHHHHHCCCEEEEECHHH
T ss_pred CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECHH
T ss_conf 9838995706898433499999999999998766987799984566
No 76
>2h85_A Putative ORF1AB polyprotein; endoribonuclease, RNA, NSP, viral protein; 2.60A {Sars coronavirus} SCOP: c.66.1.48 d.294.1.2 PDB: 2ozk_A 2rhb_A
Probab=20.62 E-value=11 Score=17.42 Aligned_cols=30 Identities=13% Similarity=0.094 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHHHH----HHHCCHHHHHHHHC
Q ss_conf 8999872589999985----00000000012210
Q gi|254780846|r 170 IRTALTKGHVLNAAHL----LGYRFTIESDVIHG 199 (324)
Q Consensus 170 IR~~l~~Gdi~~an~l----LGr~y~i~G~Vv~G 199 (324)
=|+.|..-.-+-.++. +|.++-+-|.|-+.
T Consensus 212 ErDFL~m~~~~FI~KYgled~~~eHivyGD~s~~ 245 (347)
T 2h85_A 212 ETDFLELAMDEFIQRYKLEGYAFEHIVYGDFSHG 245 (347)
T ss_dssp HHHHHHSCHHHHHHHTTCTTSCHHHHTTCBCSSS
T ss_pred HHHHHHCCHHHHHHHHCCCCCCCCEEEEECCCCC
T ss_conf 6777620678899761732257743899356897
No 77
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12}
Probab=20.11 E-value=33 Score=14.28 Aligned_cols=73 Identities=14% Similarity=0.140 Sum_probs=35.1
Q ss_pred HHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHH-HC--CCCCEEEEEECCCCCCCCCCCCCHHHHHH---HHHCCC
Q ss_conf 7899998851131000225640577522830268886-21--42780299983455303377556024677---510126
Q gi|254780846|r 75 PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKV-LV--EWLEVKTVITGTKFRFGKDRAGDRGILQK---RGEKYG 148 (324)
Q Consensus 75 ~~~k~~~l~~~Gid~vi~~~F~~~~a~ls~e~Fi~~i-L~--~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~---~~~~~g 148 (324)
..+++..|+++||..|-+.|.. ++.. .+..... .. -.+.+.... --|-+||-...|..+.|++ -|.+.|
T Consensus 181 ~~~~ldYLk~LGvtaI~L~Pi~-e~~~---~~~~~~~~~~~~wGYd~~~y~-a~d~~yGt~p~~~~~dfk~LV~~aH~~G 255 (657)
T 2wsk_A 181 HPVMINYLKQLGITALELLPVA-QFAS---EPRLQRMGLSNYWGYNPVAMF-ALHPAYACSPETALDEFRDAIKALHKAG 255 (657)
T ss_dssp SHHHHHHHHHHTCCEEEESCCE-EECC---CHHHHTTTCCCSSCCCEEEEE-EECGGGCSSGGGHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHCCCCEEEECCCC-CCCC---CCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 5577789997489889978963-0688---754345677677783765353-5673225577754999999999998558
Q ss_pred CEEE
Q ss_conf 4167
Q gi|254780846|r 149 FHTV 152 (324)
Q Consensus 149 ~~v~ 152 (324)
+.|+
T Consensus 256 I~VI 259 (657)
T 2wsk_A 256 IEVI 259 (657)
T ss_dssp CEEE
T ss_pred CEEE
T ss_conf 8799
Done!