HHSEARCH alignment of GI: 254780846 and SCOP domain: d1n08a_

Alignment
>d1n08a_ b.43.5.1 (A:) Riboflavin kinase {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=100.00  E-value=2.6e-43  Score=299.55  Aligned_cols=130  Identities=24%  Similarity=0.339  Sum_probs=116.1

Q ss_pred             HCCHHHHHHHHCCCCC-CEEEEEEEEEEHHCC-C---CCCHHHHEEEEEEEECCCCCHHCCCCCCCCCCCCCCEEEEEEE
Q ss_conf             0000000122100201-101111121100002-2---2310110002476305656211057899726779714999994
Q gi|254780846|r  188 YRFTIESDVIHGEKIG-RTLGFPTANMQLSPD-I---LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFI  262 (324)
Q Consensus       188 r~y~i~G~Vv~G~~~G-r~lGfPTaNi~~~~~-~---~p~~GVY~~~v~~~~~~~~~~v~niG~~PT~~~~~~~~iE~hi  262 (324)
                      +||+++|+|+||++|| |+||||||||.++.. .   .|+.|||++++.+ ++.+|+||+|||.||||++ ...++|+||
T Consensus        14 yPy~i~G~Vv~G~~~G~R~LGfPTANl~~~~~~~l~~~P~~GVYa~~v~i-~~~~y~~v~niG~rPTf~~-~~~~~Evhi   91 (154)
T d1n08a_          14 YPIRFEGKVVHGFGRGSKELGIPTANISEDAIQELLRYRDSGVYFGYAMV-QKRVFPMVMSVGWNPYYKN-KLRSAEVHL   91 (154)
T ss_dssp             CCEEEEEEEECCSSSCGGGGTCCCEEECGGGTTTTTTTSCSEEEEEEEEE-TTEEEEEEEEEEECTTCSS-CCEEEEEEE
T ss_pred             CCEEEEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEEEE-ECEEEEEEEEECCCHHCCC-CCCEEEEEE
T ss_conf             88899999982895587655707862007513443235654327889864-0115777776536311044-563588898


Q ss_pred             ECCCC-CCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             06785-5189889999460000887468989999999997999999987448721134
Q gi|254780846|r  263 FDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSERD  319 (324)
Q Consensus       263 ldf~~-dlYg~~i~v~f~~~iR~e~kF~s~~~L~~qI~~D~~~a~~~l~~~~~~~~~d  319 (324)
                      |||++ ||||+.|+|+|++|||+|+||+|+|+|++||++|++.||++|+.......+.
T Consensus        92 ldf~~~dlYg~~i~V~~~~~iR~e~kF~s~e~L~~qI~~D~~~ar~~L~~~~~~~~~~  149 (154)
T d1n08a_          92 IERQGEDFYEEIMRVIVLGYIRPELNYAGLDKLIEDIHTDIRVALNSMDRPSYSSYKK  149 (154)
T ss_dssp             TTCCSCCCTTCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHTSHHHHGGGG
T ss_pred             ECCCCHHHCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCC
T ss_conf             3242221257899999814336984539999999999999999999986815776420


SCOP domain information

class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin kinase-like
family: ATP-dependent riboflavin kinase-like
domain: Riboflavin kinase
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]