HHSEARCH alignment of GI: 254780846 and SCOP domain: d1nb9a_

Alignment
>d1nb9a_ b.43.5.1 (A:) Riboflavin kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.8e-42  Score=294.16  Aligned_cols=130  Identities=28%  Similarity=0.405  Sum_probs=117.3

Q ss_pred             CCHHHHHHHHCCCCC-CEEEEEEEEEEHHC-CCCC---CHHHHEEEEEEEECCCCCHHCCCCCCCCCCCCCCEEEEEEEE
Q ss_conf             000000122100201-10111112110000-2223---101100024763056562110578997267797149999940
Q gi|254780846|r  189 RFTIESDVIHGEKIG-RTLGFPTANMQLSP-DILL---KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIF  263 (324)
Q Consensus       189 ~y~i~G~Vv~G~~~G-r~lGfPTaNi~~~~-~~~p---~~GVY~~~v~~~~~~~~~~v~niG~~PT~~~~~~~~iE~hil  263 (324)
                      ||+++|.|+||+++| |+||||||||.++. ..+|   +.|||++++.+.++.+|+||+|||.||||++ ...++|+|+|
T Consensus         4 Py~i~G~Vv~G~~~G~r~LGfPTANl~~~~~~~lp~~~~~GVY~~~v~i~~~~~y~gi~niG~rPTf~~-~~~~~E~h~l   82 (147)
T d1nb9a_           4 PYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVVSIGWNPYYKN-TKKSMETHIM   82 (147)
T ss_dssp             SEEEEEECBCCSSSCGGGGTCCCEECCHHHHHTSCTTSCSEEEEEEEEETTCCCEEEEEEEEECTTSSS-CCEEEEEEES
T ss_pred             CEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCC-CCCEEEEEEE
T ss_conf             889999998589548775372884774755642444345574699999507974310788612200025-5625899982


Q ss_pred             -CCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             -67855189889999460000887468989999999997999999987448721134
Q gi|254780846|r  264 -DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSERD  319 (324)
Q Consensus       264 -df~~dlYg~~i~v~f~~~iR~e~kF~s~~~L~~qI~~D~~~a~~~l~~~~~~~~~d  319 (324)
                       ||++||||+.++|+|++|||+|+||+|+|+|++||++|++.||++|+....+..++
T Consensus        83 ~dF~~dlYG~~i~V~~~~~iR~e~KF~s~~~L~~qI~~Di~~ar~~l~~~~~~~~~~  139 (147)
T d1nb9a_          83 HTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIEEAKKRLELPEYLKIKE  139 (147)
T ss_dssp             SCCSSCCTTSEEEEEEEEEEECCCCCSSHHHHHHHHHHHHHHHHHHTTSHHHHGGGG
T ss_pred             CCCCCCEEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCC
T ss_conf             457875001589999986726984849999999999999999999978814656323


SCOP domain information

class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin kinase-like
family: ATP-dependent riboflavin kinase-like
domain: Riboflavin kinase
species: Human (Homo sapiens) [TaxId: 9606]