HHSEARCH alignment of GI: 254780846 and SCOP domain: d1v8fa_

Alignment
>d1v8fa_ c.26.1.4 (A:) Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) {Thermus thermophilus [TaxId: 274]}
Probab=98.78  E-value=9.1e-09  Score=74.88  Aligned_cols=168  Identities=18%  Similarity=0.233  Sum_probs=107.7

Q ss_pred             CEEECCCCCCC-CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHH
Q ss_conf             94224885211-27610188499993156502899999999999502797799983798689847888662000078999
Q gi|254780846|r    1 MHVFHNIEINQ-SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE   79 (324)
Q Consensus         1 Mki~~~~~~~~-~~p~~~~~~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~   79 (324)
                      |++++++.... .++...=+.|-|+|   ++|-||..|++++.+.+   ..+|+|.--+|..|-.++.-..+-.++++-+
T Consensus         1 M~~i~~~~el~~~l~~~~i~~VPTMG---aLH~GHlsLi~~a~~~~---~~vvvSIFVNP~QF~~~eD~~~YPr~~~~D~   74 (276)
T d1v8fa_           1 MRTVSTVAELRAALPREGVGFVPTMG---YLHRGHLALVERARREN---PFVVVSVFVNPLQFGPGEDYHRYPRDLERDR   74 (276)
T ss_dssp             CEEECSHHHHHHHCCSSCEEEEEECS---SCCHHHHHHHHHHHHHC---SEEEEEECCCGGGCCTTSSTTTSCCCHHHHH
T ss_pred             CEEECCHHHHHHHHCCCCEEEECCCC---CHHHHHHHHHHHHHHHC---CCEEEEEEECCCCCCCCCHHHCCCCCHHHHH
T ss_conf             96974099999986059889985876---07489999999999758---9789999866766787101220564256349


Q ss_pred             HHHHHCCCCCCCCCCCHHHHH---------------HC-----CCHHH------HHHHHCCCCCEEEEEEC-CCCCCCCC
Q ss_conf             988511310002256405775---------------22-----83026------88862142780299983-45530337
Q gi|254780846|r   80 KILEKMGFSALIRYKFTLETA---------------NY-----SAEQF------IQKVLVEWLEVKTVITG-TKFRFGKD  132 (324)
Q Consensus        80 ~~l~~~Gid~vi~~~F~~~~a---------------~l-----s~e~F------i~~iL~~~l~~k~ivVG-~Df~FG~~  132 (324)
                      ++|++.|+|.++..+-+ ++.               ++     -|..|      +.+ |.+..++...+-| .||.    
T Consensus        75 ~~l~~~~vd~vf~P~~~-e~yp~~~~~~~~~~~~l~~~leG~~RPgHF~GV~tVV~k-Lf~ii~P~~a~fGeKD~Q----  148 (276)
T d1v8fa_          75 ALLQEAGVDLLFAPGVE-EMYPEGFATRVQVEGPLTALWEGAVRPGHFQGVATVVAR-LFLLVQPQRAYFGEKDYQ----  148 (276)
T ss_dssp             HHHHHTTCSEEECCCHH-HHSCTTCCEEEEECSHHHHSTHHHHSTTHHHHHHHHHHH-HHHHHCCSEEEEEGGGHH----
T ss_pred             HHHHHCCCCEEEECCCC-CCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH-HHHHCCCCEEEEEECCHH----
T ss_conf             99985799799833533-456655532799635335556689897137789999999-996457650145400235----


Q ss_pred             CCCCHHHHHHHHHCCC--CEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             7556024677510126--4167615223023330230368999872589999985
Q gi|254780846|r  133 RAGDRGILQKRGEKYG--FHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL  185 (324)
Q Consensus       133 r~Gd~~~L~~~~~~~g--~~v~~i~~~~~~~~~~ISSt~IR~~l~~Gdi~~an~l  185 (324)
                         -...++++.+.++  ++++.+|.++..+|-..||.+.  +|..-+.+.|..+
T Consensus       149 ---Ql~iIk~mv~~l~~~i~Ii~~ptvRe~dGLAlSSRN~--~Ls~~er~~A~~i  198 (276)
T d1v8fa_         149 ---QLLVVRRMVRDLGFPVEVVGVPTVREEDGLALSSRNV--YLSPETRKKAPVL  198 (276)
T ss_dssp             ---HHHHHHHHHHHHTCCCEEEEECCCBCTTSCBCCGGGG--GCCHHHHHHTTHH
T ss_pred             ---HHHHHHHHHHHHCCCEEEEEEEEEECCCCEEEEHHHH--HCCCHHHHHHHHH
T ss_conf             ---8999999999828980799876675036402102455--5252145567888


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC)
domain: Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC)
species: Thermus thermophilus [TaxId: 274]